mRNA_E-siliculosus-1a_F_contig14152.2457.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14152.2457.1
Unique NamemRNA_E-siliculosus-1a_F_contig14152.2457.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: A0A5B7SLF6_9FLAO (Amino acid dehydrogenase n=1 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SLF6_9FLAO)

HSP 1 Score: 647 bits (1668), Expect = 1.200e-232
Identity = 310/350 (88.57%), Postives = 336/350 (96.00%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFTVSGPPIGGAKSGINFNPNDPRK+GVL+RWYHAV+PLLK+YYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLR+GVIKA+E+D ++P  GRKYTVADMITGYGVAEAVRHYYDI+GG+VVGK+AVVQGFGNVGSAAAYYLA+MGAKVVGIIDRAGGVINE+GFSFEEI+ FFL+KKGNSL+AD   LIPFE+IN++IW L+TEIF PCAASRL+TKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRV I+DE IFNDTSDTIRKAILNIFKQNP K N+C TGFEIALKQL+
Sbjct:   61 TMEVKFTVSGPPIGGAKSGINFNPNDPRKRGVLERWYHAVSPLLKNYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRLGVIKALESDAYAPTTGRKYTVADMITGYGVAEAVRHYYDIFGGNVVGKRAVVQGFGNVGSAAAYYLAKMGAKVVGIIDRAGGVINEEGFSFEEIEAFFLSKKGNSLMADAHDLIPFEDINQRIWKLQTEIFVPCAASRLVTKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVAIDDEEIFNDTSDTIRKAILNIFKQNPTKVNLCSTGFEIALKQLV 410
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: A0A7H9AR90_9FLAO (Amino acid dehydrogenase n=1 Tax=Costertonia aggregata TaxID=343403 RepID=A0A7H9AR90_9FLAO)

HSP 1 Score: 635 bits (1637), Expect = 6.340e-228
Identity = 307/350 (87.71%), Postives = 331/350 (94.57%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFTVSGPPIGGAKSGINFNPNDPRKKGVL+RWY AV+PLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLR+GVIKA+E++ +SP + +KYTVADMITGYGVAEAVRH+YDIYGGSVVGK+A+VQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVI E+GFSFEEI+ FFL KKGN+L+A  D+LIPFEEIN +IW L TEIF PCAASRLITKEQI Q+IDTGLEVISCGANVPFADKEIFFGPIME+TD RVSLIPDFVSNCGMARVFAYFMEKRVGI+D LIF DTSDTIRKAILNIFKQNP KT++C TGFEIALKQLI
Sbjct:   61 TMEVKFTVSGPPIGGAKSGINFNPNDPRKKGVLERWYRAVSPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRLGVIKALESNAYSPDISKKYTVADMITGYGVAEAVRHFYDIYGGSVVGKRAIVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVIKEEGFSFEEIKHFFLTKKGNALMASADELIPFEEINTRIWTLPTEIFLPCAASRLITKEQIGQMIDTGLEVISCGANVPFADKEIFFGPIMEFTDKRVSLIPDFVSNCGMARVFAYFMEKRVGIDDNLIFKDTSDTIRKAILNIFKQNPTKTDLCNTGFEIALKQLI 410
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: A0A524JVT7_9FLAO (Amino acid dehydrogenase n=3 Tax=Flavobacteriales TaxID=200644 RepID=A0A524JVT7_9FLAO)

HSP 1 Score: 634 bits (1635), Expect = 1.280e-227
Identity = 305/350 (87.14%), Postives = 332/350 (94.86%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFTVSGPPIGGAKSGINFNPNDPRK+GVL+RWY AV+PLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLR+GVIKA+E  +F+P   RKYTVADMITGYGVAEAV+HYY IYGG+V+GK+AV+QGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVI E+GF+FEEIQ FFLNKKGNSL+AD D++IPF+EIN +IW L TEIF PCAASRLITKEQIT++IDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGI+DELIF DTSDTI KAILNIF+QNP KTN+ +TGFEIALKQL+
Sbjct:   61 TMEVKFTVSGPPIGGAKSGINFNPNDPRKRGVLERWYAAVSPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRLGVIKALENRRFTPDTARKYTVADMITGYGVAEAVKHYYAIYGGNVMGKRAVIQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVIKEEGFTFEEIQRFFLNKKGNSLMADADEMIPFDEINNRIWTLPTEIFVPCAASRLITKEQITKMIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGIDDELIFKDTSDTIGKAILNIFRQNPSKTNLSKTGFEIALKQLV 410
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: A4ATX0_MARSH (Glu/Leu/Phe/Val dehydrogenase family protein n=5 Tax=Maribacter TaxID=252356 RepID=A4ATX0_MARSH)

HSP 1 Score: 624 bits (1610), Expect = 8.200e-224
Identity = 299/350 (85.43%), Postives = 329/350 (94.00%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFTVSGPPIGGAKSGINFNP+DPRKKGVL+RWY AV+PLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLR GVIK IE++ ++P V RKYT+ADMITGYGVAEAVRHYYDI+GG+V+GKKAVVQGFGNVG AAA+YLAQMGAK+VGI+DR GGVINE+GFSFEEI+DFFLNK  N+L+A  DQ+IPFEEI E+IW L+TEIF PCAASRLITK QI+++IDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGI+D+LIF DTSDTIRKAILNIFKQN  K N+ +TGFEIALKQL+
Sbjct:   61 TMEVKFTVSGPPIGGAKSGINFNPHDPRKKGVLQRWYRAVSPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRQGVIKPIESELYTPDVSRKYTIADMITGYGVAEAVRHYYDIFGGNVMGKKAVVQGFGNVGGAAAFYLAQMGAKIVGILDRTGGVINEEGFSFEEIKDFFLNKHNNNLMASADQMIPFEEIKERIWTLQTEIFVPCAASRLITKNQISKMIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGIDDDLIFKDTSDTIRKAILNIFKQNHTKLNLSKTGFEIALKQLV 410
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: A0A7Y2DH65_9FLAO (Amino acid dehydrogenase n=1 Tax=Pricia sp. TaxID=2268138 RepID=A0A7Y2DH65_9FLAO)

HSP 1 Score: 622 bits (1605), Expect = 4.740e-223
Identity = 297/350 (84.86%), Postives = 328/350 (93.71%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFTVSGPPIGGAKSGINFNPNDPRKKGVL+RWYHAV+PLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLR+GVIKAIE   ++P   RKYTVADMITG+GVAEA+RHYYDI+GG+V+GK+A+VQGFGNVG AAAYYL+QMGA+VVGIIDR GGVI ++GF FEEIQ+F+LNKKGNSL+A  D++IPF EINE+IW+L  EIFAPCAASRL+TKEQI  +ID GLEVISCGANVPFADKEIFFGPIMEYTDG++SLIPDF+SNCGMARVFAYFMEKRV I+DELIFNDTSDTIRKAILNIFKQNP K NI +TGFEIALKQLI
Sbjct:   61 TMEVKFTVSGPPIGGAKSGINFNPNDPRKKGVLERWYHAVSPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRLGVIKAIEHSNYTPDSSRKYTVADMITGFGVAEAIRHYYDIHGGNVMGKRAIVQGFGNVGGAAAYYLSQMGARVVGIIDRTGGVIKKEGFRFEEIQNFYLNKKGNSLMASADEMIPFNEINERIWSLPAEIFAPCAASRLVTKEQIDTMIDHGLEVISCGANVPFADKEIFFGPIMEYTDGKISLIPDFISNCGMARVFAYFMEKRVEIDDELIFNDTSDTIRKAILNIFKQNPSKKNISRTGFEIALKQLI 410
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: A0A3B0BYQ1_9FLAO (Amino acid dehydrogenase n=1 Tax=Ulvibacterium marinum TaxID=2419782 RepID=A0A3B0BYQ1_9FLAO)

HSP 1 Score: 622 bits (1604), Expect = 6.730e-223
Identity = 292/350 (83.43%), Postives = 329/350 (94.00%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFT+SGPPIGGAKSGINFNPNDPRKKGVLKRWYHAV+PLLKSYYGTGGDLNVDE HEVIPITED GVWHPQEGVFNGHF+PTEADKINRIGQLR+GVIK +E+D++SP   RKYTVADMITG+GVAEA+RHYYDI+GG+V+GK+AVVQGFGNVG AAA+YL+QMGAK+VGI+DR GGVINE GF+F+EI+ FFLNKKGN+L+A  +Q+IPF+E+ E IW L TEIFAPCAASRLITK QI +++DTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDF+SNCGMARVFAYFMEKRVGI+DELIFNDTS+TIRKAILNIFKQNP K N+ +TGFEIALKQL+
Sbjct:   61 TMEVKFTISGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVSPLLKSYYGTGGDLNVDETHEVIPITEDVGVWHPQEGVFNGHFRPTEADKINRIGQLRLGVIKPLESDRYSPDTSRKYTVADMITGFGVAEAIRHYYDIFGGNVMGKRAVVQGFGNVGGAAAFYLSQMGAKIVGILDRTGGVINEKGFTFDEIKHFFLNKKGNNLMAPANQMIPFDEVKESIWELPTEIFAPCAASRLITKAQIAKMMDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFISNCGMARVFAYFMEKRVGIDDELIFNDTSNTIRKAILNIFKQNPSKINLSRTGFEIALKQLV 410
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: UPI0016605C53 (amino acid dehydrogenase n=1 Tax=Maribacter sp. ANRC-HE7 TaxID=2737171 RepID=UPI0016605C53)

HSP 1 Score: 621 bits (1602), Expect = 1.360e-222
Identity = 294/350 (84.00%), Postives = 331/350 (94.57%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFTVSGPPIGGAKSGINFNP+DPRK+GVL+RWYHAV+PLLKSYYGTGGDLNVDE  EVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLR+GVIK +E ++FSP V RKYTVADMITGYGVAEAVRHYYDI+GG+V+GK+AV+QGFGNVG AAA+YLAQMGAK+VGI+DRAGGV+ EDGFSFEEI++F+LNK+GN+L+A  DQ+IPFEEIN+ IW L+TEIFAPCAASRLITK+QI+ LI+TGLEVISCGANVPFADKEIFFGPIMEY DG+VSLIPDF+SNCGMARVFAYFMEKRVG++DELIF DTSDTIRKAILNIFKQN  K N+ +TGFEIALKQL+
Sbjct:   61 TMEVKFTVSGPPIGGAKSGINFNPHDPRKRGVLERWYHAVSPLLKSYYGTGGDLNVDETKEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRLGVIKPLENNRFSPDVTRKYTVADMITGYGVAEAVRHYYDIFGGNVMGKRAVIQGFGNVGGAAAFYLAQMGAKIVGILDRAGGVVKEDGFSFEEIKEFYLNKQGNNLMASADQMIPFEEINQVIWGLQTEIFAPCAASRLITKDQISNLIETGLEVISCGANVPFADKEIFFGPIMEYADGKVSLIPDFISNCGMARVFAYFMEKRVGMDDELIFKDTSDTIRKAILNIFKQNQSKLNVSKTGFEIALKQLV 410
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: A0A411EB09_9FLAO (Glu/Leu/Phe/Val dehydrogenase n=8 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A411EB09_9FLAO)

HSP 1 Score: 618 bits (1594), Expect = 2.240e-221
Identity = 295/350 (84.29%), Postives = 331/350 (94.57%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFTVSGPPIGGAKSGINFNPNDPRKKGVL+RWY AV+PLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLR+GVIK +E+  +SP   +KYTVADMITG+GVAEA++HYYDIYGGSV+GKKAVVQGFGNVG+AAA+YLAQMGAKVVGIIDR GGVI EDGFSF++I++FFL+KKGN+LIAD D++IPFEE+N++IW+L TEIFAPCAASRLIT++QITQ+IDTGLEVISCGANVPFADKEIFFGPIME+TD +VSLIPDF+SNCGMARVFAYFME RV ++DELIFNDTSD IRKAILNIFKQN  KTNI +T FEIALKQL+
Sbjct:   61 TMEVKFTVSGPPIGGAKSGINFNPNDPRKKGVLERWYRAVSPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRLGVIKVLESPVYSPDTSKKYTVADMITGFGVAEAIKHYYDIYGGSVIGKKAVVQGFGNVGAAAAFYLAQMGAKVVGIIDREGGVIKEDGFSFDQIKEFFLHKKGNTLIADADRMIPFEEMNKRIWSLPTEIFAPCAASRLITRDQITQMIDTGLEVISCGANVPFADKEIFFGPIMEHTDEKVSLIPDFISNCGMARVFAYFMEGRVAMDDELIFNDTSDVIRKAILNIFKQNHTKTNISKTAFEIALKQLL 410
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: G0LA05_ZOBGA (NAD(P)-dependent oxidoreductase n=12 Tax=Zobellia TaxID=112040 RepID=G0LA05_ZOBGA)

HSP 1 Score: 615 bits (1587), Expect = 2.610e-220
Identity = 292/350 (83.43%), Postives = 327/350 (93.43%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFTVSGPPIGGAKSGINFNPNDPRKKGVL+RWYHAV+PLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLR+GVIKA+E  K+SP V RKYTVADMITGYGVAEAV+HYYDIYGG+VVGK+A++QGFGNVGSAAAYYLAQMGAKVVGIIDR+GGVI E+G+SFEE++ FFLNK GN+L+    ++IPF+EINE+IW+L+ EIF PCAASRL+ K QI +LID+GLEVISCGANVPFADKEIFFGPIMEYTDG+VSLIPDF+SNCGMARVFAYFMEKRVG++DELIF+DTS+TIRKAILN ++  P K NI QT FEIALKQLI
Sbjct:   61 TMEVKFTVSGPPIGGAKSGINFNPNDPRKKGVLERWYHAVSPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRLGVIKALENRKYSPDVSRKYTVADMITGYGVAEAVKHYYDIYGGNVVGKRAIIQGFGNVGSAAAYYLAQMGAKVVGIIDRSGGVIKEEGYSFEEVKSFFLNKDGNNLVVGDGEMIPFDEINERIWSLQAEIFTPCAASRLVLKSQIDRLIDSGLEVISCGANVPFADKEIFFGPIMEYTDGKVSLIPDFISNCGMARVFAYFMEKRVGMDDELIFSDTSETIRKAILNTYEHKPSKKNISQTAFEIALKQLI 410
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BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Match: UPI00037762BE (amino acid dehydrogenase n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI00037762BE)

HSP 1 Score: 613 bits (1582), Expect = 1.510e-219
Identity = 290/350 (82.86%), Postives = 332/350 (94.86%), Query Frame = 1 
Query:    1 TMDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTGGDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGVIKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVVQGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKKGNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTGLEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFMEKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI 1050
            TM+VKFTVSGPPIGGAKSGINFNP+DPRK+GVL+RWY AV+PLLKSYYGTGGDLNVDEIHEVIPITED GVWHPQEGVFNGHFKPTEADKINRIGQLR+GVIK +E++ +SP + +KYTVADMITGYGVAEA+RHYYDI+GG+V+GK+A+VQGFGNVG+AAA+YLAQMGA++VGIIDR GGVINEDGFSFEEI+ FFL+KKGN+LIAD D++IPF+E+NE+IW+L TEIFAPCAASRLIT+EQIT++IDTGLEVISCGANVPFAD EIFFG IMEYTD RVSLIPDF+SNCGMAR+FAYFME+RVG++DELIFNDTSDTIRKAILNIFK+N  K N+ +T FEIALKQLI
Sbjct:   61 TMEVKFTVSGPPIGGAKSGINFNPHDPRKRGVLERWYAAVSPLLKSYYGTGGDLNVDEIHEVIPITEDVGVWHPQEGVFNGHFKPTEADKINRIGQLRLGVIKVLESNTYSPDITKKYTVADMITGYGVAEAIRHYYDIFGGTVIGKRAIVQGFGNVGAAAAFYLAQMGARIVGIIDRVGGVINEDGFSFEEIKTFFLHKKGNTLIADADKMIPFDEMNERIWSLPTEIFAPCAASRLITQEQITEMIDTGLEVISCGANVPFADPEIFFGSIMEYTDERVSLIPDFISNCGMARLFAYFMERRVGMDDELIFNDTSDTIRKAILNIFKENVTKKNMSKTAFEIALKQLI 410
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14152.2457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5B7SLF6_9FLAO1.200e-23288.57Amino acid dehydrogenase n=1 Tax=Aggregatimonas sa... [more]
A0A7H9AR90_9FLAO6.340e-22887.71Amino acid dehydrogenase n=1 Tax=Costertonia aggre... [more]
A0A524JVT7_9FLAO1.280e-22787.14Amino acid dehydrogenase n=3 Tax=Flavobacteriales ... [more]
A4ATX0_MARSH8.200e-22485.43Glu/Leu/Phe/Val dehydrogenase family protein n=5 T... [more]
A0A7Y2DH65_9FLAO4.740e-22384.86Amino acid dehydrogenase n=1 Tax=Pricia sp. TaxID=... [more]
A0A3B0BYQ1_9FLAO6.730e-22383.43Amino acid dehydrogenase n=1 Tax=Ulvibacterium mar... [more]
UPI0016605C531.360e-22284.00amino acid dehydrogenase n=1 Tax=Maribacter sp. AN... [more]
A0A411EB09_9FLAO2.240e-22184.29Glu/Leu/Phe/Val dehydrogenase n=8 Tax=Flavobacteri... [more]
G0LA05_ZOBGA2.610e-22083.43NAD(P)-dependent oxidoreductase n=12 Tax=Zobellia ... [more]
UPI00037762BE1.510e-21982.86amino acid dehydrogenase n=2 Tax=Flavobacteriaceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14152contigE-siliculosus-1a_F_contig14152:2..1054 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1050
Model size1053
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelFlavobacteriia
COG Functional cat.E
EC1.4.1.3
EggNOG OGs1HXP5@117743,4NG6Y@976,COG0334@1,COG0334@2
EggNOG free text desc.Belongs to the Glu Leu Phe Val dehydrogenases family
KEGG ModuleM00740
KEGG Pathwayko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964
KEGG ReactionR00243,R00248
KEGG koko:K00261
KEGG rclassRC00006,RC02799
Preferred namegdhA2
Seed eggNOG ortholog143224.JQMD01000002_gene2355
Seed ortholog evalue1.3e-180
Seed ortholog score639.0
Taxonomic scopeBacteria
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927929.7313292-UTR-E-siliculosus-1a_F_contig14152:1..41622927929.7313292-UTR-E-siliculosus-1a_F_contig14152:1..4Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig14152 2..4 +
1696318741.8310452-UTR-E-siliculosus-1a_F_contig14152:1..41696318741.8310452-UTR-E-siliculosus-1a_F_contig14152:1..4Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig14152 2..4 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927929.7461731-CDS-E-siliculosus-1a_F_contig14152:4..10541622927929.7461731-CDS-E-siliculosus-1a_F_contig14152:4..1054Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14152 5..1054 +
1696318741.8469467-CDS-E-siliculosus-1a_F_contig14152:4..10541696318741.8469467-CDS-E-siliculosus-1a_F_contig14152:4..1054Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14152 5..1054 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14152.2457.1prot_E-siliculosus-1a_F_contig14152.2457.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14152 5..1054 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14152.2457.1

>prot_E-siliculosus-1a_F_contig14152.2457.1 ID=prot_E-siliculosus-1a_F_contig14152.2457.1|Name=mRNA_E-siliculosus-1a_F_contig14152.2457.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=350bp
MDVKFTVSGPPIGGAKSGINFNPNDPRKKGVLKRWYHAVAPLLKSYYGTG
GDLNVDEIHEVIPITEDAGVWHPQEGVFNGHFKPTEADKINRIGQLRMGV
IKAIETDKFSPGVGRKYTVADMITGYGVAEAVRHYYDIYGGSVVGKKAVV
QGFGNVGSAAAYYLAQMGAKVVGIIDRAGGVINEDGFSFEEIQDFFLNKK
GNSLIADVDQLIPFEEINEQIWNLRTEIFAPCAASRLITKEQITQLIDTG
LEVISCGANVPFADKEIFFGPIMEYTDGRVSLIPDFVSNCGMARVFAYFM
EKRVGINDELIFNDTSDTIRKAILNIFKQNPRKTNICQTGFEIALKQLI*
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mRNA from alignment at E-siliculosus-1a_F_contig14152:2..1054+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14152.2457.1 ID=mRNA_E-siliculosus-1a_F_contig14152.2457.1|Name=mRNA_E-siliculosus-1a_F_contig14152.2457.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1053bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14152:2..1054+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACTATGGACGTAAAATTTACCGTTTCTGGTCCCCCAATTGGAGGAGCGAA
ATCTGGTATAAATTTCAATCCAAACGATCCTAGAAAGAAAGGTGTTTTAA
AACGTTGGTACCATGCAGTAGCACCATTATTGAAAAGCTACTACGGTACC
GGTGGAGATCTTAACGTAGATGAGATACACGAAGTTATTCCAATAACGGA
AGATGCCGGAGTTTGGCACCCCCAAGAAGGAGTTTTTAATGGGCATTTCA
AACCGACAGAAGCCGATAAGATCAATCGTATTGGTCAACTGAGAATGGGT
GTTATCAAAGCTATAGAGACAGATAAATTTTCACCAGGAGTTGGCCGAAA
ATATACGGTTGCTGACATGATTACTGGGTACGGTGTCGCAGAGGCTGTTC
GTCATTATTATGATATTTATGGTGGTAGTGTTGTAGGAAAAAAAGCTGTA
GTTCAAGGTTTTGGAAATGTGGGAAGTGCCGCTGCTTATTACTTAGCACA
AATGGGTGCTAAAGTTGTAGGAATTATTGATAGAGCAGGAGGTGTTATTA
ATGAAGATGGATTTTCTTTTGAAGAGATTCAAGATTTTTTTCTAAATAAA
AAAGGGAATAGTCTGATTGCCGATGTAGATCAACTGATACCATTTGAAGA
AATTAATGAGCAAATTTGGAATTTACGAACAGAAATTTTTGCTCCCTGTG
CGGCGTCAAGGCTTATAACTAAGGAACAAATCACCCAATTGATTGATACA
GGTTTAGAGGTGATTTCTTGCGGAGCAAACGTGCCCTTTGCGGATAAAGA
AATATTCTTTGGGCCAATAATGGAATATACTGATGGTCGAGTAAGCCTTA
TTCCTGACTTTGTTAGTAATTGCGGAATGGCCCGAGTCTTTGCTTATTTT
ATGGAGAAAAGAGTAGGAATTAATGACGAATTAATATTTAATGATACTTC
TGATACCATTCGAAAGGCAATTTTAAATATCTTTAAACAAAATCCCCGTA
AAACTAACATTTGTCAAACCGGATTTGAAATAGCACTAAAACAATTAATT
TAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14152:2..1054+

>mRNA_E-siliculosus-1a_F_contig14152.2457.1 ID=mRNA_E-siliculosus-1a_F_contig14152.2457.1|Name=mRNA_E-siliculosus-1a_F_contig14152.2457.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2100bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14152:2..1054+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGTAAAATTTACCGTTTCTGGTCCCCCAATTGGAGGAGCGAAATC
TGGTATAAATTTCAATCCAAACGATCCTAGAAAGAAAGGTGTTTTAAAAC
GTTGGTACCATGCAGTAGCACCATTATTGAAAAGCTACTACGGTACCGGT
GGAGATCTTAACGTAGATGAGATACACGAAGTTATTCCAATAACGGAAGA
TGCCGGAGTTTGGCACCCCCAAGAAGGAGTTTTTAATGGGCATTTCAAAC
CGACAGAAGCCGATAAGATCAATCGTATTGGTCAACTGAGAATGGGTGTT
ATCAAAGCTATAGAGACAGATAAATTTTCACCAGGAGTTGGCCGAAAATA
TACGGTTGCTGACATGATTACTGGGTACGGTGTCGCAGAGGCTGTTCGTC
ATTATTATGATATTTATGGTGGTAGTGTTGTAGGAAAAAAAGCTGTAGTT
CAAGGTTTTGGAAATGTGGGAAGTGCCGCTGCTTATTACTTAGCACAAAT
GGGTGCTAAAGTTGTAGGAATTATTGATAGAGCAGGAGGTGTTATTAATG
AAGATGGATTTTCTTTTGAAGAGATTCAAGATTTTTTTCTAAATAAAAAA
GGGAATAGTCTGATTGCCGATGTAGATCAACTGATACCATTTGAAGAAAT
TAATGAGCAAATTTGGAATTTACGAACAGAAATTTTTGCTCCCTGTGCGG
CGTCAAGGCTTATAACTAAGGAACAAATCACCCAATTGATTGATACAGGT
TTAGAGGTGATTTCTTGCGGAGCAAACGTGCCCTTTGCGGATAAAGAAAT
ATTCTTTGGGCCAATAATGGAATATACTGATGGTCGAGTAAGCCTTATTC
CTGACTTTGTTAGTAATTGCGGAATGGCCCGAGTCTTTGCTTATTTTATG
GAGAAAAGAGTAGGAATTAATGACGAATTAATATTTAATGATACTTCTGA
TACCATTCGAAAGGCAATTTTAAATATCTTTAAACAAAATCCCCGTAAAA
CTAACATTTGTCAAACCGGATTTGAAATAGCACTAAAACAATTAATTTAA
ATGGACGTAAAATTTACCGTTTCTGGTCCCCCAATTGGAGGAGCGAAATC
TGGTATAAATTTCAATCCAAACGATCCTAGAAAGAAAGGTGTTTTAAAAC
GTTGGTACCATGCAGTAGCACCATTATTGAAAAGCTACTACGGTACCGGT
GGAGATCTTAACGTAGATGAGATACACGAAGTTATTCCAATAACGGAAGA
TGCCGGAGTTTGGCACCCCCAAGAAGGAGTTTTTAATGGGCATTTCAAAC
CGACAGAAGCCGATAAGATCAATCGTATTGGTCAACTGAGAATGGGTGTT
ATCAAAGCTATAGAGACAGATAAATTTTCACCAGGAGTTGGCCGAAAATA
TACGGTTGCTGACATGATTACTGGGTACGGTGTCGCAGAGGCTGTTCGTC
ATTATTATGATATTTATGGTGGTAGTGTTGTAGGAAAAAAAGCTGTAGTT
CAAGGTTTTGGAAATGTGGGAAGTGCCGCTGCTTATTACTTAGCACAAAT
GGGTGCTAAAGTTGTAGGAATTATTGATAGAGCAGGAGGTGTTATTAATG
AAGATGGATTTTCTTTTGAAGAGATTCAAGATTTTTTTCTAAATAAAAAA
GGGAATAGTCTGATTGCCGATGTAGATCAACTGATACCATTTGAAGAAAT
TAATGAGCAAATTTGGAATTTACGAACAGAAATTTTTGCTCCCTGTGCGG
CGTCAAGGCTTATAACTAAGGAACAAATCACCCAATTGATTGATACAGGT
TTAGAGGTGATTTCTTGCGGAGCAAACGTGCCCTTTGCGGATAAAGAAAT
ATTCTTTGGGCCAATAATGGAATATACTGATGGTCGAGTAAGCCTTATTC
CTGACTTTGTTAGTAATTGCGGAATGGCCCGAGTCTTTGCTTATTTTATG
GAGAAAAGAGTAGGAATTAATGACGAATTAATATTTAATGATACTTCTGA
TACCATTCGAAAGGCAATTTTAAATATCTTTAAACAAAATCCCCGTAAAA
CTAACATTTGTCAAACCGGATTTGAAATAGCACTAAAACAATTAATTTAA
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