mRNA_E-siliculosus-1a_F_contig1412.2443.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1412.2443.1
Unique NamemRNA_E-siliculosus-1a_F_contig1412.2443.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 747 bits (1929), Expect = 8.340e-265
Identity = 391/406 (96.31%), Postives = 399/406 (98.28%), Query Frame = 1
Query:    1 GKSTKLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGTFPLAQHKTVIEELYSLMKPVSVIMKESQEKGVPTGLSTFAALVMLRADTLDVTKPLEVTVPRKATTTDGAHTSATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDASVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAEPGKTTEGDTSGASASAPPPFKRSRGPLTVGTTERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGKALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQQYIPMEVPKLSKTQGQEAVPRRLSNPNEETERLS 1218
            GKS KLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGG+FPLAQHKTVIEELYSLMKP+SVIMKESQEKG+PTGLSTFAALVMLRADTLDVTKPLEVTVPRK TTTD A T ATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDA+VVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGA PGK TEGDTSGASASAPPPFKRSRGPLTVGT+ERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEG+ALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQ+YIPMEVPKLSK+QGQEAVPRRLSNPNEETERLS
Sbjct:  406 GKSMKLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGSFPLAQHKTVIEELYSLMKPISVIMKESQEKGLPTGLSTFAALVMLRADTLDVTKPLEVTVPRKVTTTDWARTLATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDANVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAYPGKATEGDTSGASASAPPPFKRSRGPLTVGTSERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVPRRLSNPNEETERLS 811          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.100e-43
Identity = 136/403 (33.75%), Postives = 199/403 (49.38%), Query Frame = 1
Query:   13 KLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGTFPLAQHKTVIEELYSLMKPVSVIMKESQEKGVPTGLSTFAALVMLRADTLDVTKPLEVTVPRKATT----TDGAHTSATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDASVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAEPGKTTEGDTSGASASAPPPFKRSRGPLTVGTTER-----TKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGKALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQQYIPMEVPKLSKTQGQEAVPRRLSNP 1194
            KLVN  P RW     VLE  + +   ++  Y +  +G   PLA H+  I+ELYSL+KPV+ ++   Q+  VPTG +    L  L+  T +V   L+V  P +A      T G    AT+ + R  + L  V    R  LA+ALD+R+F + Y  S  +   +D+VF+M   + P    L ++  + S++  A  V K I  K++ L V+LAE          E D S A  + P     S          +     T +    G+F   K      +   + T + + + E +      A T   D   E +LE+W   G+ LYP +ARAARV+   PAS+AVLERDF+ A  ++  +RS   A YVEMVLFL+GN   IP ++P+L     Q  +P RLSNP
Sbjct:  243 KLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAR--EGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVRAQGWPEGTGGGERKATS-VPRLHNHLTQVGRDAREHLASALDRRYFDRCYK-SADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMERKQAGPEQDESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLF---KKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGR-LYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNP 637          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.130e-34
Identity = 133/408 (32.60%), Postives = 194/408 (47.55%), Query Frame = 1
Query:   13 KLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGTFPLAQHKTVIEELYSLMKPVSVIMKESQEKGVPTGLSTFAALVMLRADTLDVTKPLEVTVPRKATTTDGAHTSATTTIERPADSLQ-------DVTTTTRTMLAAALDKRFFSKRYDASVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAEPGKTTEGDTSGASASAPPPFKRSRGPLTVGTTERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGKALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQQYIPMEVPKLSKTQGQEAVPRRLSNPNEETERL 1215
            KLVNA P RW    NVLE ++ +  A++  Y    +G   PL      I+ELYS++KP + ++ + Q+  VPTG     AL  L+  TL+V  PLE+  P +      A TS     ERPA S          V   TR  +  ++D  +F KRY ++      +DYV   + C  P   T P LT  C++         L  G   D+    A  A A+         + A  S  P FK    P+       T      G+FG        ++ PS    ++  + E     A    +       E +L++W     A YP +AR ARV+   PAS+AVLERDFS AGR++T +RS + + YVEM++FL+GN   IP ++ KL++   +  +P RL+NP E  E+L
Sbjct:  330 KLVNAAPQRWSGVTNVLEAVIVNRAAIDGVY--TAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQ--AETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAES--QDTDYV---STCRWPC--TRPRLT--CAA---------LHTG---DVSTTPAGSAAADEPAAKRARQAAAPGSVHPLFKA---PVNKREEATTNMYASLGLFGPG-GDEQNEEPPS---FEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHA-YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRLANPVERLEQL 704          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.450e-26
Identity = 98/293 (33.45%), Postives = 148/293 (50.51%), Query Frame = 1
Query:  364 ERPADS-------LQDVTTTTRTMLAAALDKRFFSKRYDASVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAEPGKTTEGDTSGA--SASAPPPFKRSRGPLTVGTTERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGKALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQQYIPMEVPKLSKTQGQEAVPRRLSNPNEETERL 1215
            ERPA S       L  V   TR  +  ++D R+F KRY ++      +DYVF+M   + P    L ++  + S+   AG V   I  KV+ L VKLAE A    G   +G T+ A  +A+  P  KR+R     G                     S+++ PS    ++  + E  +  A    +  +    E +L++W     A YP +AR ARV++   AS+AVLE DFS AGR++T +RS + + YVEM+LFL+GN   IP ++ KL++   +  +P RL+NP E  E+L
Sbjct:  215 ERPATSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKS--QDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTG---DGSTTPAWSAAADKPAAKRARQAAAPG---------------------SKEEPPS---FEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHA-YPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRLANPVEGLEQL 477          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: A0A2V3IDA5_9FLOR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDA5_9FLOR)

HSP 1 Score: 101 bits (252), Expect = 2.680e-20
Identity = 107/368 (29.08%), Postives = 166/368 (45.11%), Query Frame = 1
Query:  130 FPLAQHKTVIEELYSLMKPVSVIMKESQEKGVPTGLSTFAALVMLRADTLDVTKPLEVTVP---------RKATTTDGAHTSATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDASVVAVPPSDYVFEMAACMSPA---LHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKL--AEGAGAEPGK--TTEGDTSGASASAPPPFKRSRGPLTVGTTERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGKALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQQYIPMEVPKLSKTQGQEAVPRRL 1185
            FPL      + EL+SLM PVS IMK++Q    P  +  F AL  L    L+  +PLE+  P         R+  T D  H             L ++T  TR +L+ AL KRF+ K Y+ +     P   + EM   M      L+ L ++     +++   R    I  ++VDL +K   A+  G E G+  +  GD S            S+G   V  T+    L     F    +        +E +++       D   A   D T  +     LL +W  +G   YP+++  AR +L  P SSA ++RDF TAG  ++  R+R  +A+V+M+LFL+ N   IP +VP++S  + +  +P RL
Sbjct:    4 FPLIAENENLVELFSLMLPVSEIMKQAQLTTFPARIDGFLALCRLNRHLLNSEEPLEIYDPSREDYEAPNRQPMTRDPLH-------------LCNLTKHTRVLLSNALQKRFY-KSYNGT-----PRSSMLEMQVFMHLVHRKLNCLGYILEPFDAEKHRNR----IMDEIVDLCIKCEQAQNGGVEEGERQSIHGDKS--------IVLESQG---VDKTKNFNNLWDFEEFACDDTPVEESLSTAEESVRAEINSYLDHERALPGDVTSRN-----LLNWWRTKGSK-YPSLSVVARAVLGHPVSSARIDRDFGTAGSFLSSRRTRHDSAFVDMLLFLHCNLDLIPSDVPEMSNPEWKSQIPARL 331          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 7.180e-19
Identity = 115/404 (28.47%), Postives = 182/404 (45.05%), Query Frame = 1
Query:   13 KLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGTFPLAQHKTVIEELYSLMKPVSVIMKESQEKGVPTGLSTFAALVMLRADTLDVTKPLEVTVPRK--ATTTDGAHTSATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDASVVAVPPSDYVFEMAACMSPALHTLPWL------TSMCSSDEEAGRVHKL--IKGKVVDLMVKLAEGAGAEPGKTTEGDTSGASASAPPPFKRSRGPLTVGTTERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTI-SDYPIEVLLEFWAG-EGKALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQQYIPMEVPKLSKTQGQEA-VPRRL 1185
            KL  AV  RW+ST  ++  IL  + A+++ +   E+G  FPLA +KT IEE+YS+++ V  + +  Q+    T        V L   TL+ +KPL V       A   D  HT      +RP + L +   TTR + A AL KRF   RY +S +      ++F+ A  ++P    + ++      T+  S     G +     IK ++ + +++L E A  E        TS    + P    RSR      T     R     V  G   S   ++  S L  +   ++E    +  + +  I SD   +   ++W+   GK+    +   A+ +L  PAS+  +ERDFS A   +   R+ +  AY EM LFL     +IP +VPK +    Q A +P RL
Sbjct:  375 KLAQAVVQRWVSTAKMMFRILEQFTAIQKCFV--EKGKVFPLANYKTEIEEVYSILRAVKTVTEYCQKTYEATMEGGLRQTVQLLISTLEPSKPLRVHHVEAIGADAPDPPHT------DRPHEDLTETGRTTREVFATALAKRFLP-RYKSSEL--NRRTHLFDHAPLLNPRTRKMRYIELLLKSTAATSYSGSCGTLATFTDIKERIQEEVLELLEQAVVEHRAREPVPTSDEEVTGP----RSR------TVPAATRAADDDV--GFDDSEGEEEESSSLYERSP-EEEAKSILKEWLNLLIPSDKRGKDAADYWSTPHGKSQPLPLRAVAQGVLGCPASTGAMERDFSIADMFMPRKRASVDPAYFEMSLFLRAQYDFIPDDVPKFANEAEQTAAIPNRL 754          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: W2JRK8_PHYPR (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2JRK8_PHYPR)

HSP 1 Score: 95.5 bits (236), Expect = 1.170e-17
Identity = 110/400 (27.50%), Postives = 181/400 (45.25%), Query Frame = 1
Query:    1 GKSTKLVNAVPHRWISTCNVLEEILRSWQALEEHYQKN------EQG---GTFPLAQHKTVIEELYSLMKPVSVIMKESQEKGVPTGLSTFAALVMLRADTLDVTKPLEVTVPRKATTTDGAHTSATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDASVVAVPPSDYVFEMAACMSP-------ALHTLPWLTSM--CSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAEPGKTTEGDTSGASASAPPPFKRSRGPLTVGTTERTKRLLKSGVFGGSKSSTSRDDGPSEL-TMKEVCQQEFDRFMARFADT-----TISDYPIEVLLEFWAGEGK-ALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQQYI 1125
            G + +L+N   HR++    V+  IL  W  L+  Y+K       + G     F L Q K  + ++ SL++P++ + K  Q +      +    L  LR   LD T PL+     ++TTTD           RP + L ++ +TTR++L  A  + FF +  +  V+      Y FE+   +SP       AL  +   T++   +S + A R +  ++ KV+D +  + +   A+P  T+ G        APPP         V   E   +L          S T+ +  PS   T   +  Q  D  + R+  T      I    +E +L +W  + +   +  +   ARVL S+P+SSA +ERDF TAGR++T  RS L    V+M ++LN N+ Y+
Sbjct:  154 GNARQLLNFRIHRFLGLARVVRRILLLWDPLKTWYEKGIARARRDNGVPPAAFSLTQDKMDLIQILSLLEPIATVCKIGQYES-ENQCNVLLGLFKLRISVLDNTAPLKDC---RSTTTDRR-------FFRP-EKLSNLASTTRSLLQKAFHRVFFRRYTERDVMNT--CSYAFEIQLLLSPNFKNPDGALKKVIQRTNLQAAASQQVADRHYTQVRRKVIDGVRTIMKAVDAQP--TSPGIV------APPP--------DVVFAEDIMKLF---------SETADEVVPSPAETHNSMHTQRVDEELDRWLTTPTSLRAIRPGEVEPVLSYWKRQQEQGNFQLLPLVARVLFSMPSSSAQIERDFGTAGRMVTPERSSLEPYNVDMAMYLNCNRSYV 514          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 5.060e-17
Identity = 45/89 (50.56%), Postives = 63/89 (70.79%), Query Frame = 1
Query:  952 LYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRL-SAAYVEMVLFLNGNQQYIPMEVPKLSKTQGQEAVPRRLSNPNEETERL 1215
            +YP +AR ARV+   PAS+AVLERDFS AGR++T +R  + S  YVEM+LFL+GN   IP ++ KL++   +  +P RL+NP E  E+L
Sbjct:    5 VYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIPGRLANPVEGLEQL 93          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: W2QQF5_PHYPN (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QQF5_PHYPN)

HSP 1 Score: 86.7 bits (213), Expect = 7.540e-15
Identity = 108/399 (27.07%), Postives = 177/399 (44.36%), Query Frame = 1
Query:   13 KLVNAVPHRWISTCNVLEEILRSWQALEEHYQ------KNEQG---GTFPLAQHKTVIEELYSLMKPVSVIMKESQEKGVPTGLSTFAALVMLRADTLDVTKPLEVTVPRKATTTDGAHTSATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDASVVAVPPSDYVFEMAACMSP-------ALHTLPWLTSM--CSSDEEAGRVHKLIKGKVVDLMVKLAEGAGAEPGKTTEGDTSGASASAPPPFKRSRGPLTVGTTERTKRLLKSGVFGGSKSSTSRDDGPSEL-TMKEVCQQEFDRFMARFADT-----TISDYPIEVLLEFWAGE----GKALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQQYI 1125
            +L+N   HR++    V+  I+  W  L   Y+      + + G     FPL Q K  + ++ SL++P++ + K  Q +      +    L  LR   LD T PL+     ++T TD           RP + L ++ +TTR++L  A  + FF +  +  V+      Y FE+   +SP       AL  +   T++   +S + A R +  ++ KV+D +  + +    +P  T+ G        APPP         V   E   +L          S T+ +  PS   T   +  Q  D  + R+  T      I    +E +L +W  +       L P +AR   VL S+P+SSA +ERDF TAGR++T  RS L    V+M ++LN N+ Y+
Sbjct:   80 QLLNFRIHRFLGLARVVRRIVLLWDPLLTWYEARIARARRDNGVPPAAFPLTQDKMDLIQILSLLEPIATVCKIGQYES-ENQCNVLLGLFKLRISVLDNTAPLKDC---RSTKTDRR-------FFRP-EKLSNLASTTRSLLQKAFHRVFFRRSTERDVMNT--CSYAFEIQLLLSPNFKNPDGALKKVIQRTNLQAVASQQVADRHYTQVRRKVIDGVRTIMKAVDTQP--TSLGIV------APPP--------DVVFAEDIMKLF---------SETADEVVPSPAETHNSMHTQRVDEELDRWLTTPTSLRAIRPGEVEPVLSYWKRQQEQGNSQLLPLVAR---VLFSMPSSSAQIERDFGTAGRMVTPERSSLEPYNVDMAMYLNCNRSYV 436          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.550e-14
Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 1
Query:  892 TISDYPIEVLLEFWAGEGKALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQQYIPMEVPKLSKT 1155
            TI +   + +L++W     + YP +ARAARV+   PAS+AVLE DF  AGR++T +RS   A YVEM+LFL+GN   IP ++P    T
Sbjct:   28 TIDELSCDSVLKWWK-RWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIPACQPT 114          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE8.340e-26596.31Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LBK4_ECTSI1.100e-4333.75Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE2.130e-3432.60Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE1.450e-2633.45Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A2V3IDA5_9FLOR2.680e-2029.08Dimer_Tnp_hAT domain-containing protein n=1 Tax=Gr... [more]
A0A6H5KX27_9PHAE7.180e-1928.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W2JRK8_PHYPR1.170e-1727.50Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ph... [more]
A0A6H5KCJ3_9PHAE5.060e-1750.56Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
W2QQF5_PHYPN7.540e-1527.07Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ph... [more]
A0A6H5L5L6_9PHAE2.550e-1446.59Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1412contigE-siliculosus-1a_F_contig1412:31689..32906 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1218
Model size1218
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelPeronosporales
EggNOG OGs2CZK4@1,2SARG@2759,3QH9R@4776
Seed eggNOG ortholog4792.ETI54656
Seed ortholog evalue2.4e-13
Seed ortholog score83.6
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927927.5400054-CDS-E-siliculosus-1a_F_contig1412:31688..329061622927927.5400054-CDS-E-siliculosus-1a_F_contig1412:31688..32906Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1412 31689..32906 +
1696318740.768889-CDS-E-siliculosus-1a_F_contig1412:31688..329061696318740.768889-CDS-E-siliculosus-1a_F_contig1412:31688..32906Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1412 31689..32906 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1412.2443.1prot_E-siliculosus-1a_F_contig1412.2443.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1412 31689..32906 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1412.2443.1

>prot_E-siliculosus-1a_F_contig1412.2443.1 ID=prot_E-siliculosus-1a_F_contig1412.2443.1|Name=mRNA_E-siliculosus-1a_F_contig1412.2443.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=406bp
GKSTKLVNAVPHRWISTCNVLEEILRSWQALEEHYQKNEQGGTFPLAQHK
TVIEELYSLMKPVSVIMKESQEKGVPTGLSTFAALVMLRADTLDVTKPLE
VTVPRKATTTDGAHTSATTTIERPADSLQDVTTTTRTMLAAALDKRFFSK
RYDASVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIK
GKVVDLMVKLAEGAGAEPGKTTEGDTSGASASAPPPFKRSRGPLTVGTTE
RTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTIS
DYPIEVLLEFWAGEGKALYPNMARAARVLLSVPASSAVLERDFSTAGRLI
TGARSRLSAAYVEMVLFLNGNQQYIPMEVPKLSKTQGQEAVPRRLSNPNE
ETERLS
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1412:31689..32906+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1412.2443.1 ID=mRNA_E-siliculosus-1a_F_contig1412.2443.1|Name=mRNA_E-siliculosus-1a_F_contig1412.2443.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1218bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1412:31689..32906+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCAAGTCGACGAAGCTCGTCAACGCCGTCCCTCACCGCTGGATCTCTAC GTGCAACGTCCTGGAGGAGATTCTCCGCAGCTGGCAGGCGCTCGAGGAGC ACTACCAGAAGAACGAGCAAGGGGGGACTTTCCCTCTCGCTCAACACAAG ACGGTGATAGAAGAGCTCTACAGCTTGATGAAGCCCGTCTCTGTTATCAT GAAGGAAAGCCAGGAGAAGGGGGTGCCGACAGGCCTGAGTACGTTCGCCG CCCTCGTCATGCTTCGGGCCGACACGCTGGACGTCACAAAGCCCCTGGAA GTGACCGTGCCCCGCAAGGCCACGACTACAGATGGGGCCCACACCTCGGC GACAACCACCATCGAGCGCCCGGCCGACAGCCTCCAAGACGTCACCACGA CCACTCGCACCATGCTCGCTGCCGCGCTCGACAAGCGCTTCTTCAGTAAA CGCTACGACGCCAGCGTAGTGGCGGTGCCACCGTCGGACTACGTCTTCGA GATGGCGGCGTGCATGAGCCCCGCCCTTCACACACTGCCCTGGCTGACAT CGATGTGCAGCAGTGATGAGGAAGCGGGACGTGTCCACAAGCTCATCAAG GGTAAGGTTGTCGACCTCATGGTGAAGCTGGCGGAGGGAGCGGGTGCTGA GCCGGGGAAAACGACCGAGGGTGACACCAGTGGCGCCAGCGCGTCTGCCC CGCCACCCTTCAAGCGGTCGCGTGGCCCGTTGACCGTCGGCACTACAGAG AGGACGAAGCGGCTACTCAAGAGCGGTGTCTTTGGCGGTAGCAAGAGCAG CACCAGCAGGGACGACGGCCCGAGTGAGCTGACTATGAAGGAGGTCTGCC AGCAGGAGTTCGACCGCTTCATGGCGCGCTTCGCCGACACCACCATCTCG GACTACCCGATAGAGGTGCTGCTGGAGTTCTGGGCGGGCGAGGGGAAGGC GCTCTACCCAAACATGGCCCGTGCCGCCAGGGTACTGTTGTCGGTGCCGG CGTCTTCGGCGGTGCTCGAGAGGGACTTCAGCACAGCTGGGCGCCTGATC ACCGGGGCACGTAGCCGTCTCAGTGCGGCCTATGTGGAGATGGTGCTGTT CCTCAACGGCAACCAACAGTACATCCCGATGGAGGTGCCCAAGCTGTCAA AAACGCAGGGCCAGGAGGCGGTGCCAAGACGGCTTTCCAACCCCAACGAG GAGACGGAGAGACTCTCC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1412:31689..32906+

>mRNA_E-siliculosus-1a_F_contig1412.2443.1 ID=mRNA_E-siliculosus-1a_F_contig1412.2443.1|Name=mRNA_E-siliculosus-1a_F_contig1412.2443.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2436bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1412:31689..32906+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCAAGTCGACGAAGCTCGTCAACGCCGTCCCTCACCGCTGGATCTCTAC
GTGCAACGTCCTGGAGGAGATTCTCCGCAGCTGGCAGGCGCTCGAGGAGC
ACTACCAGAAGAACGAGCAAGGGGGGACTTTCCCTCTCGCTCAACACAAG
ACGGTGATAGAAGAGCTCTACAGCTTGATGAAGCCCGTCTCTGTTATCAT
GAAGGAAAGCCAGGAGAAGGGGGTGCCGACAGGCCTGAGTACGTTCGCCG
CCCTCGTCATGCTTCGGGCCGACACGCTGGACGTCACAAAGCCCCTGGAA
GTGACCGTGCCCCGCAAGGCCACGACTACAGATGGGGCCCACACCTCGGC
GACAACCACCATCGAGCGCCCGGCCGACAGCCTCCAAGACGTCACCACGA
CCACTCGCACCATGCTCGCTGCCGCGCTCGACAAGCGCTTCTTCAGTAAA
CGCTACGACGCCAGCGTAGTGGCGGTGCCACCGTCGGACTACGTCTTCGA
GATGGCGGCGTGCATGAGCCCCGCCCTTCACACACTGCCCTGGCTGACAT
CGATGTGCAGCAGTGATGAGGAAGCGGGACGTGTCCACAAGCTCATCAAG
GGTAAGGTTGTCGACCTCATGGTGAAGCTGGCGGAGGGAGCGGGTGCTGA
GCCGGGGAAAACGACCGAGGGTGACACCAGTGGCGCCAGCGCGTCTGCCC
CGCCACCCTTCAAGCGGTCGCGTGGCCCGTTGACCGTCGGCACTACAGAG
AGGACGAAGCGGCTACTCAAGAGCGGTGTCTTTGGCGGTAGCAAGAGCAG
CACCAGCAGGGACGACGGCCCGAGTGAGCTGACTATGAAGGAGGTCTGCC
AGCAGGAGTTCGACCGCTTCATGGCGCGCTTCGCCGACACCACCATCTCG
GACTACCCGATAGAGGTGCTGCTGGAGTTCTGGGCGGGCGAGGGGAAGGC
GCTCTACCCAAACATGGCCCGTGCCGCCAGGGTACTGTTGTCGGTGCCGG
CGTCTTCGGCGGTGCTCGAGAGGGACTTCAGCACAGCTGGGCGCCTGATC
ACCGGGGCACGTAGCCGTCTCAGTGCGGCCTATGTGGAGATGGTGCTGTT
CCTCAACGGCAACCAACAGTACATCCCGATGGAGGTGCCCAAGCTGTCAA
AAACGCAGGGCCAGGAGGCGGTGCCAAGACGGCTTTCCAACCCCAACGAG
GAGACGGAGAGACTCTCCGGCAAGTCGACGAAGCTCGTCAACGCCGTCCC
TCACCGCTGGATCTCTACGTGCAACGTCCTGGAGGAGATTCTCCGCAGCT
GGCAGGCGCTCGAGGAGCACTACCAGAAGAACGAGCAAGGGGGGACTTTC
CCTCTCGCTCAACACAAGACGGTGATAGAAGAGCTCTACAGCTTGATGAA
GCCCGTCTCTGTTATCATGAAGGAAAGCCAGGAGAAGGGGGTGCCGACAG
GCCTGAGTACGTTCGCCGCCCTCGTCATGCTTCGGGCCGACACGCTGGAC
GTCACAAAGCCCCTGGAAGTGACCGTGCCCCGCAAGGCCACGACTACAGA
TGGGGCCCACACCTCGGCGACAACCACCATCGAGCGCCCGGCCGACAGCC
TCCAAGACGTCACCACGACCACTCGCACCATGCTCGCTGCCGCGCTCGAC
AAGCGCTTCTTCAGTAAACGCTACGACGCCAGCGTAGTGGCGGTGCCACC
GTCGGACTACGTCTTCGAGATGGCGGCGTGCATGAGCCCCGCCCTTCACA
CACTGCCCTGGCTGACATCGATGTGCAGCAGTGATGAGGAAGCGGGACGT
GTCCACAAGCTCATCAAGGGTAAGGTTGTCGACCTCATGGTGAAGCTGGC
GGAGGGAGCGGGTGCTGAGCCGGGGAAAACGACCGAGGGTGACACCAGTG
GCGCCAGCGCGTCTGCCCCGCCACCCTTCAAGCGGTCGCGTGGCCCGTTG
ACCGTCGGCACTACAGAGAGGACGAAGCGGCTACTCAAGAGCGGTGTCTT
TGGCGGTAGCAAGAGCAGCACCAGCAGGGACGACGGCCCGAGTGAGCTGA
CTATGAAGGAGGTCTGCCAGCAGGAGTTCGACCGCTTCATGGCGCGCTTC
GCCGACACCACCATCTCGGACTACCCGATAGAGGTGCTGCTGGAGTTCTG
GGCGGGCGAGGGGAAGGCGCTCTACCCAAACATGGCCCGTGCCGCCAGGG
TACTGTTGTCGGTGCCGGCGTCTTCGGCGGTGCTCGAGAGGGACTTCAGC
ACAGCTGGGCGCCTGATCACCGGGGCACGTAGCCGTCTCAGTGCGGCCTA
TGTGGAGATGGTGCTGTTCCTCAACGGCAACCAACAGTACATCCCGATGG
AGGTGCCCAAGCTGTCAAAAACGCAGGGCCAGGAGGCGGTGCCAAGACGG
CTTTCCAACCCCAACGAGGAGACGGAGAGACTCTCC
back to top