mRNA_E-siliculosus-1a_F_contig1412.2442.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1412.2442.1
Unique NamemRNA_E-siliculosus-1a_F_contig1412.2442.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 433 bits (1114), Expect = 8.870e-145
Identity = 216/225 (96.00%), Postives = 218/225 (96.89%), Query Frame = 1
Query:    1 MYVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNPGARQVIDTVKKVVEHLNKSTLMKVR 675
            MYVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFV ELY ATVSKFSYSIR+AITGAGGAVLHANFD WTSK SNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSS+QLSDILLIWVQEVLKEFGLDTNH FCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKN GARQVIDTVKKVVEHLNKSTLMK R
Sbjct:  172 MYVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYDATVSKFSYSIRKAITGAGGAVLHANFDLWTSKWSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSKQLSDILLIWVQEVLKEFGLDTNHLFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNLGARQVIDTVKKVVEHLNKSTLMKAR 396          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: A0A2V3ILY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY8_9FLOR)

HSP 1 Score: 166 bits (420), Expect = 2.040e-47
Identity = 81/216 (37.50%), Postives = 129/216 (59.72%), Query Frame = 1
Query:   22 ISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNPGARQVIDTVKKVVEHLNKSTLMK 669
            +   L FS+    + R F  V  + +   + L P  I+  V ++Y  T S     +R+ I+    A LH N + WTS+LS +++ G++LF+ +  + + + L+AV+ F PS +L     LSDIL +W  +++ EF +  +    + +D GSDVKRLC  ++  +WEWC PHMLNCVLV AFGT  +    +N GAR+++  +KKV+ H+NKS++MK
Sbjct:   20 VKKFLPFSMVSFSEFRTFIGVLDQKSELNNQLQPGSIRKLVVKIYIGTTSSLMKKLRKEISVTPLAFLHINVNLWTSRLSKDRFFGIQLFYVSREWEVKAVLLAVRHFCPSGNLLPGRSLSDILQLWTNKIILEFNVSYDKILSSTSDTGSDVKRLCSVLIPESWEWCLPHMLNCVLVGAFGTGLNCVNIRNNGARRLLKDLKKVIRHVNKSSVMK 235          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 9.790e-47
Identity = 91/222 (40.99%), Postives = 132/222 (59.46%), Query Frame = 1
Query:    4 YVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNPGARQVIDTVKKVVEHLNKSTLMK 669
            +VK  +I      S  + + VRA  ++     FP + ++ + +K  V E+Y AT S+F   +   I G    +LH + D W  K S+ KY+G+ LF+   T+VL S L+AV+ F P+ +L    +LS ++   ++ VL+E+GLD +  F   +D+GSDVKRLC  +L   WEWC  HM+NC LVEAFGT+   A  +NPGAR+VI   KKVVEH+ KS   K
Sbjct:  167 WVKCNMIEGFCPVSHGEKEWVRASLKLTALKNFPITGIHNEAVKQMVVEMYAATASQFKMEMAAQIGGM--RLLHLSLDLWVDKFSSLKYVGIPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDSAKSRNPGARKVITMGKKVVEHIPKSPRAK 386          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 3.560e-43
Identity = 84/203 (41.38%), Postives = 119/203 (58.62%), Query Frame = 1
Query:    4 YVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNPGARQ 612
            +VK  II      S  + + VRA  ++     FP + ++ + +K  V E+Y AT S+F   +   I G    +LH N D W  K S+ KYIG+RLF+   T+VL S L+AV+ F P+ +L    +LS +L  +++ VL+E+GLD +  F   +DAGSDVKRLC  +L   WEWC  HM+NC LVEAFGT+ + A   NP   Q
Sbjct:   14 WVKCNIIQGFCPLSHGEKEWVRASLQLTALKNFPITGIHNKAVKQMVVEMYAATASQFKMEMAAQIGGM--RLLHLNLDLWVDKFSSLKYIGIRLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVNPAKSINPRCTQ 214          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 6.200e-43
Identity = 91/222 (40.99%), Postives = 125/222 (56.31%), Query Frame = 1
Query:    4 YVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNPGARQVIDTVKKVVEHLNKSTLMK 669
            +VK  II      S  + + VRA  ++     FP + ++ + +K  +                      G  +LH N D W  K S+ KYIG+RLF+   T+VL S L+AV+ F P+ +L    +LS +L  +++ VL+E+GLD +  F   +DAGSDVKRLC  +L   WEWC  HM+NC LVEAFGT+   A   NPGAR+VI TVKKVVEH+ KS   K
Sbjct:  112 WVKCNIIEGFCPLSHGEKEWVRASLKLTALKNFPITGIHNKAVKQMIG---------------------GMRLLHHNLDLWVDKFSSLKYIGIRLFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAK 312          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: D7G3L2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L2_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 2.030e-30
Identity = 73/225 (32.44%), Postives = 121/225 (53.78%), Query Frame = 1
Query:    4 YVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTSAW--EWCFPHMLNCVLVEAFGTNASRAACKNPGARQVIDTVKKVVEHLNKSTLMKV 672
            YVK + I     F+  +   VR  + +  +D F  + +  + +K  +AE+YHAT  +F+ S+++ +  A   +L+ N D WTS +S  KYIG+R+F+      + + L+A++ F+P        Q  D++  WV++VL + G+        VTDAGSDV+    K ++ AW  EWC PH LN   ++  G    +   KNP  R +++ +K +V H NKS   K+
Sbjct:   75 YVKAYPIDSAEPFNRVERSSVRRLYSLLNKD-FDVTGINNKAVKKVIAEMYHATTQEFNASMQKTLRNATIPILYVNCDLWTSHVSGLKYIGVRVFYLDEKMNVKTHLLAIRGFRPPG-----AQTGDVVCKWVRQVLGQHGIRDEDIAGAVTDAGSDVR----KGVSQAWPWEWCLPHALNRATIDGTGMTQVKEKSKNPLCRDLLELIKGIVGHFNKSAADKI 289          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 8.790e-30
Identity = 75/215 (34.88%), Postives = 112/215 (52.09%), Query Frame = 1
Query:   49 SDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSAL--VAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTS----AWEWCFPHMLNCVLVEAFGTNASRAACKNPGARQVIDTVKKVVEHLNKSTLMKVR 675
            S   ++R    +  +  FP   L P+ +KH + ELY AT      ++ + +  A   VLH   D WT K S  K++G+ L++ T++F +  AL  V VK + P     S  + S++LL  V+ +L E GL  +      TD+GSDVK + +  L       W WC  HM+     +AFG +      KNPGAR VI  V KVVE+LNKS+ ++ +
Sbjct:   55 SSGDELRTLLALIGDSDFPP--LRPRRVKHLLTELYVATKKVVVGNMLEEVRKAPLPVLHHMIDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDVKAVSVNGLHPHYGVLWNWCACHMMVKAAEQAFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSYLRAK 267          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: D7G4Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z8_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 4.160e-29
Identity = 71/225 (31.56%), Postives = 121/225 (53.78%), Query Frame = 1
Query:    4 YVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTSAW--EWCFPHMLNCVLVEAFGTNASRAACKNPGARQVIDTVKKVVEHLNKSTLMKV 672
            YVK + I     F+ ++   VR  + +  +D F  + +  + +K  +A++YH T  +F+ S+++ +  A   +L+ N D WTS +S  KYIG+R+F+      + + L+A++ F+P        Q  D++  WV++VL + G+        VTDAGSDV+    K ++ AW  EWC PH LN   ++  G    +   KNP  R +++ +K +V H NKS   K+
Sbjct:   75 YVKAYPIDSAEPFNRAERASVRRLYSLLNKD-FDVTGINNKAVKKVIAKMYHVTTREFNASMQKTLRNATIPILYVNCDLWTSHVSGLKYIGVRVFYLDEKMNVKTHLLAIRGFRPPG-----AQTGDVVCKWVRQVLGQHGIRDEDIAGAVTDAGSDVR----KGVSQAWPWEWCLPHALNRATIDGTGMTQVKEKSKNPLCRDLLELIKGIVGHFNKSAADKI 289          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: A0A6H5L6Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z1_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 7.950e-29
Identity = 74/228 (32.46%), Postives = 120/228 (52.63%), Query Frame = 1
Query:    4 YVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQ---MIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPS--ADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNPGARQVIDTVKKVVEHLNKSTLMKV 672
            + K FII    AFSL+D   VR      C D    + +  +    IK  + E+Y AT   F+  + + +  A   +L+ N D WTS++S EKYIG+R+ +     V+ S ++ VKLF+P     +   +    ++L W  +VL + GL   +    V+D+GSDV     K      EWC PHM+N V ++  G + S A+ KN   R +++ +KK+++H N+S+  K+
Sbjct:  211 FTKAFIIHAGCAFSLADHDRVRRCLATMCPDHLDVAAINARGATCIKKMIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYIGVRVCYMNENMVIKSFMLGVKLFRPKPGVGMDDGKITGRVVLKWNAQVLGQHGLRNENFAGAVSDSGSDVSTGIAKAFRR--EWCIPHMINRVTIDGTGMSNSPASSKNHLCRDLLEKMKKIIQHFNRSSGDKI 436          
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 8.110e-29
Identity = 74/228 (32.46%), Postives = 120/228 (52.63%), Query Frame = 1
Query:    4 YVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQ---MIKHFVAELYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCTSTFVLDSALVAVKLFQPS--ADLTSSEQLSDILLIWVQEVLKEFGLDTNHRFCTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNPGARQVIDTVKKVVEHLNKSTLMKV 672
            + K FII    AFSL+D   VR      C D    + +  +    IK  + E+Y AT   F+  + + +  A   +L+ N D WTS++S EKYIG+R+ +     V+ S ++ VKLF+P     +   +    ++L W  +VL + GL   +    V+D+GSDV     K      EWC PHM+N V ++  G + S A+ KN   R +++ +KK+++H N+S+  K+
Sbjct:  132 FTKAFIIHAGCAFSLADHDRVRRCLATMCPDHLDVAAINARGATCIKKMIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYIGVRVCYMNENMVIKSFMLGVKLFRPKPGVGMDDGKITGRVVLKWNAQVLGQHGLRNENFAGAVSDSGSDVSTGIAKAFRR--EWCIPHMINRVTIDGTGMSNSPASSKNHLCRDLLEKMKKIIQHFNRSSGDKI 357          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1412.2442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE8.870e-14596.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A2V3ILY8_9FLOR2.040e-4737.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6H5KWS6_9PHAE9.790e-4740.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEC8_9PHAE3.560e-4341.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ82_9PHAE6.200e-4340.99Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D7G3L2_ECTSI2.030e-3032.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ81_9PHAE8.790e-3034.88Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G4Z8_ECTSI4.160e-2931.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6Z1_9PHAE7.950e-2932.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX27_9PHAE8.110e-2932.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1412contigE-siliculosus-1a_F_contig1412:29401..31281 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size690
Model size690
Exons3
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2CZK4@1,2SARG@2759
Seed eggNOG ortholog2880.D7G3L2
Seed ortholog evalue4.3e-28
Seed ortholog score131.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1412.2442.1prot_E-siliculosus-1a_F_contig1412.2442.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1412 29401..31281 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927927.462525-CDS-E-siliculosus-1a_F_contig1412:29400..296771622927927.462525-CDS-E-siliculosus-1a_F_contig1412:29400..29677Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1412 29401..29677 +
1696318740.7298176-CDS-E-siliculosus-1a_F_contig1412:29400..296771696318740.7298176-CDS-E-siliculosus-1a_F_contig1412:29400..29677Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1412 29401..29677 +
1622927927.4779494-CDS-E-siliculosus-1a_F_contig1412:30100..303811622927927.4779494-CDS-E-siliculosus-1a_F_contig1412:30100..30381Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1412 30101..30381 +
1696318740.741141-CDS-E-siliculosus-1a_F_contig1412:30100..303811696318740.741141-CDS-E-siliculosus-1a_F_contig1412:30100..30381Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1412 30101..30381 +
1622927927.4945426-CDS-E-siliculosus-1a_F_contig1412:31149..312811622927927.4945426-CDS-E-siliculosus-1a_F_contig1412:31149..31281Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1412 31150..31281 +
1696318740.7519956-CDS-E-siliculosus-1a_F_contig1412:31149..312811696318740.7519956-CDS-E-siliculosus-1a_F_contig1412:31149..31281Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1412 31150..31281 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1412.2442.1

>prot_E-siliculosus-1a_F_contig1412.2442.1 ID=prot_E-siliculosus-1a_F_contig1412.2442.1|Name=mRNA_E-siliculosus-1a_F_contig1412.2442.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=230bp
MYVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVAE
LYHATVSKFSYSIRQAITGAGGAVLHANFDPWTSKLSNEKYIGLRLFWCT
STFVLDSALVAVKLFQPSADLTSSEQLSDILLIWVQEVLKEFGLDTNHRF
CTVTDAGSDVKRLCLKVLTSAWEWCFPHMLNCVLVEAFGTNASRAACKNP
GARQVIDTVKKVVEHLNKSTLMKVRSAGG*
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mRNA from alignment at E-siliculosus-1a_F_contig1412:29401..31281+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1412.2442.1 ID=mRNA_E-siliculosus-1a_F_contig1412.2442.1|Name=mRNA_E-siliculosus-1a_F_contig1412.2442.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1881bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1412:29401..31281+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACGTCAAGGTCTTCATCATCTCGCACTTGCTCGCGTTTAGCCTGTC CGACAGCCAGGACGTCCGCGCGTTTTTCGAAGTGTGCTGTGAAGACACGT TCCCGAAGAGTACCTTGTACCCCCAGATGATCAAGCACTTCGTTGCCGAG CTCTACCACGCCACGGTATCCAAGTTTTCGTACTCTATACGGCAAGCGAT CACCGGGGCCGGAGGTGCCGTACTGCATGCGAACTTCGACCCTTGGACAA GCAAGTTGTCGAACGAGAAGTACATAGGTGAGTCTAGACGAATTTCTCAT GGCGGTATATGGACGGCGTTGATGATTTTATCGTTCGGTAGTGCCTTAAA GCGGCACGAGTGCCTGGGCTTCCACGTCGCACATTGATGCGGAGAGACGG CGGAGAGGGCGGTTTTGTTTTCGATTGGCCACACGCTGGCCCTGACTTAA GGAGAACAAGAAAAATCTCAAAATCGTCAAATTTGTTTCTGCTGCAGTAC TGCTGTTGCCGGTGGTTTTGAGGTGTTCCCGAAGATATCGTTCGTGCTCC CTACCAATGCACCTCTCGATAGCTGGTTGACGAATTTCCAACAACAATGG ATATAGATGTGATTCCTAACGAACCTTAACGTTTTACCGTTTCTGGCGCT ACCCTTGATTCCTCTGGCCCCTGCCTGATTTCGTTTTCGTCGATATACAG GCCTGCGACTCTTTTGGTGCACATCTACGTTTGTGCTCGACTCAGCTCTA GTCGCCGTCAAGTTATTTCAGCCTTCAGCTGACTTGACCAGCAGTGAACA ACTCTCTGACATCCTTCTCATCTGGGTTCAAGAGGTGTTGAAGGAGTTCG GCTTGGATACCAACCACCGTTTCTGTACCGTAACCGACGCTGGCTCGGAT GTTAAACGGTTGTGCTTGAAGGTGCTGACGTCGGCATGGGAGTGGTGCTT CCCCCACATGCTCAACTGCGTACTCGTCGAGGTGAGACCCATCAGTAGTT TTACCAGCAAACAAGGCAGTTGCAACAAAAGCTGCAAAGTCTTTTGGCAA CTTAGGTCGTGAACGGTTGTCACTAGAACTTTAACTTCTGTCATTGGGAC TTGGTGCACGCGCTTGATGGGACGAAGAAAGTTTGGTGCACGGGACTGAC TGGTGGATTGCCGTTGTTTGATTTTTATTAGCAGCAGCTAGAAGCAGGCA CCCCCCTTCGTATCACACCGCGAAGAAACCGTCCAGAGCATGCGGGAGAG GGTAGTTGCAACCTTCTCGCTCCACCCTCACGATACCCCAAGGCGTCTGT GCCAGAAAGATGATGGGTAGAGCTACCTCCCTCGGAGTGGCACTGCTGTT GCTGTTGCCTCCTTCGAACATTTATCGGTGGAAAGCCATACCATGTAGGT TAAAACACCGAACGAACTTGAACGAACCGCTCTCCCAATCGAACCTGGAG AGGGGGTCTACGTGTGTGGTAGGGGTAGTAGCTGGATGTGGGATGGCGGA AGTCTCGCCGCGCAACTTGTATGGGACACCTTCGTCGCAAAAAAACGTTG CACAACTTTTTCACCAGATCACATGAACATGACGCGTGTTGTATGCTTTA TGAATGCGTCATAAGTTCGGAAAAAAGTCGATAACGTGCACAATCAACAT TGGACACTCTCGCTCGCACCCACCCCGGCGTGACGACTGCAATTTGCTTC TCTTGCGTGTGTTCCCCCCCCCCCCCCCCCCCCCCCCTGTTTCGTGCAGG CGTTCGGCACTAACGCTTCGCGAGCAGCATGCAAGAACCCTGGTGCACGT CAAGTCATCGACACTGTCAAAAAGGTTGTGGAGCACCTGAACAAGAGCAC TTTGATGAAGGTTCGTAGTGCTGGTGGTTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1412:29401..31281+

>mRNA_E-siliculosus-1a_F_contig1412.2442.1 ID=mRNA_E-siliculosus-1a_F_contig1412.2442.1|Name=mRNA_E-siliculosus-1a_F_contig1412.2442.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1380bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1412:29401..31281+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACGTCAAGGTCTTCATCATCTCGCACTTGCTCGCGTTTAGCCTGTC
CGACAGCCAGGACGTCCGCGCGTTTTTCGAAGTGTGCTGTGAAGACACGT
TCCCGAAGAGTACCTTGTACCCCCAGATGATCAAGCACTTCGTTGCCGAG
CTCTACCACGCCACGGTATCCAAGTTTTCGTACTCTATACGGCAAGCGAT
CACCGGGGCCGGAGGTGCCGTACTGCATGCGAACTTCGACCCTTGGACAA
GCAAGTTGTCGAACGAGAAGTACATAGATGTACGTCAAGGTCTTCATCAT
CTCGCACTTGCTCGCGTTTAGCCTGTCCGACAGCCAGGACGTCCGCGCGT
TTTTCGAAGTGTGCTGTGAAGACACGTTCCCGAAGAGTACCTTGTACCCC
CAGATGATCAAGCACTTCGTTGCCGAGCTCTACCACGCCACGGTATCCAA
GTTTTCGTACTCTATACGGCAAGCGATCACCGGGGCCGGAGGTGCCGTAC
TGCATGCGAACTTCGACCCTTGGACAAGCAAGTTGTCGAACGAGAAGTAC
ATAGGCCTGCGACTCTTTTGGTGCACATCTACGTTTGTGCTCGACTCAGC
TCTAGTCGCCGTCAAGTTATTTCAGCCTTCAGCTGACTTGACCAGCAGTG
AACAACTCTCTGACATCCTTCTCATCTGGGTTCAAGAGGTGTTGAAGGAG
TTCGGCTTGGATACCAACCACCGTTTCTGTACCGTAACCGACGCTGGCTC
GGATGTTAAACGGTTGTGCTTGAAGGTGCTGACGTCGGCATGGGAGTGGT
GCTTCCCCCACATGCTCAACTGCGTACTCGTCGAGGCCTGCGACTCTTTT
GGTGCACATCTACGTTTGTGCTCGACTCAGCTCTAGTCGCCGTCAAGTTA
TTTCAGCCTTCAGCTGACTTGACCAGCAGTGAACAACTCTCTGACATCCT
TCTCATCTGGGTTCAAGAGGTGTTGAAGGAGTTCGGCTTGGATACCAACC
ACCGTTTCTGTACCGTAACCGACGCTGGCTCGGATGTTAAACGGTTGTGC
TTGAAGGTGCTGACGTCGGCATGGGAGTGGTGCTTCCCCCACATGCTCAA
CTGCGTACTCGTCGAGGCGTTCGGCACTAACGCTTCGCGAGCAGCATGCA
AGAACCCTGGTGCACGTCAAGTCATCGACACTGTCAAAAAGGTTGTGGAG
CACCTGAACAAGAGCACTTTGATGAAGGTTCGTAGTGCTGGTGGTTAGGC
GTTCGGCACTAACGCTTCGCGAGCAGCATGCAAGAACCCTGGTGCACGTC
AAGTCATCGACACTGTCAAAAAGGTTGTGGAGCACCTGAACAAGAGCACT
TTGATGAAGGTTCGTAGTGCTGGTGGTTAG
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