mRNA_E-siliculosus-1a_F_contig14108.2436.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14108.2436.1
Unique NamemRNA_E-siliculosus-1a_F_contig14108.2436.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: A0A0D5M841_9GAMM (tRNA(Ile)-lysidine synthase n=3 Tax=Halomonas TaxID=2745 RepID=A0A0D5M841_9GAMM)

HSP 1 Score: 459 bits (1181), Expect = 4.360e-159
Identity = 231/299 (77.26%), Postives = 255/299 (85.28%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEGQVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPPSQPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTRLTS 897
            LAALRGSGLRGLA MPYRRDA+ IALVRPWL+ R+A LE AA  L L WCEDPTN DI  DRNRLRHR+LPA+R+RWP+AE ALA+SAAH SEAD VLSEY+ AEL EL  GEGQV AS  SQRSRPRQRLLVR LCQQQGLPTPPQKRLESLL+QLT+K DA+VCIEW GAQARLWRQRLY++ PL  LPPWEV+WDG+TPL TP+GPLGW + +S    Q  SQ L  +WRQGGEVIQLP+RGRRDLKRLLQE+D+PPWERERLVV+MQ EACIGVICPPA LLWQAEG  FTRLTS
Sbjct:  136 LAALRGSGLRGLAGMPYRRDAQSIALVRPWLTVRRAELEAAAGLLELRWCEDPTNQDIRFDRNRLRHRLLPAIRERWPAAETALANSAAHASEADAVLSEYLAAELTELFTGEGQVDASALSQRSRPRQRLLVRTLCQQQGLPTPPQKRLESLLDQLTAKADAEVCIEWPGAQARLWRQRLYLLQPLEPLPPWEVSWDGQTPLETPIGPLGWQLASS----QSHSQVLTASWRQGGEVIQLPKRGRRDLKRLLQEADMPPWERERLVVVMQGEACIGVICPPAQLLWQAEGVRFTRLTS 430
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BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: A0A0F9YLW3_9ZZZZ (tRNA(Ile)-lysidine synthetase n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9YLW3_9ZZZZ)

HSP 1 Score: 459 bits (1181), Expect = 4.670e-159
Identity = 230/298 (77.18%), Postives = 256/298 (85.91%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEGQVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPPSQPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTRLT 894
            LAALRGSGLRGLA MPYRRD +GI LVRPWLS  +A LE  A SLAL WCEDPTN DI  DRNRLRHRVL A+R+RWP+AEAALA+SAAH SEAD VLSEYV+AELAELVVGEGQV A+   +RSRPRQRLL+RALCQQQGL TPPQKRLE+LLEQLT+K  A+VC+EW GAQARLWR RLYVMAPL ALPPW+V+WDG+ PL TPLGPLGW V  S     P S+P+RVTWRQGGEVI LP+RGRRDLKRLLQESDVPPWER+RLVV+MQ +AC+GVI PPATLLWQAE  +F+RLT
Sbjct:  136 LAALRGSGLRGLAGMPYRRDTQGITLVRPWLSVNRAQLEAVAHSLALVWCEDPTNRDINFDRNRLRHRVLAALRERWPAAEAALANSAAHASEADAVLSEYVKAELAELVVGEGQVDANALRKRSRPRQRLLIRALCQQQGLSTPPQKRLENLLEQLTAKAGAEVCVEWPGAQARLWRDRLYVMAPLKALPPWQVHWDGQMPLETPLGPLGWQVALSKRFSAPLSEPMRVTWRQGGEVIHLPERGRRDLKRLLQESDVPPWERKRLVVVMQEQACLGVISPPATLLWQAEDVVFSRLT 433
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BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: A0A101D4C4_9GAMM (tRNA(Ile)-lysidine synthase n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A101D4C4_9GAMM)

HSP 1 Score: 454 bits (1168), Expect = 4.720e-157
Identity = 225/294 (76.53%), Postives = 256/294 (87.07%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEGQVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPPSQPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALF 882
            LAALRGSG+RGLA MPYRRDA+GI LVRPWL+A++AALE+AA SL L+WCEDPTN+DI+LDRNRLRHRVLPA+R+RWP+ +AALA+SAAH SEA  VLSEYV+AEL+ L+ GEGQV AS  S+RSRPRQRLL+RALCQQQGLPTPPQKRLESLL+QL +  DAQVC+EW+G QARLWRQRLY+MAPL  LP WEV+WDG+TPL TPLGPLGW V  S P  Q  SQPL+VTWRQGGEVI+LP RGRRDLKRLLQES+VPPWER RLVV+MQAEAC+GV  PP  LLWQA G  F
Sbjct:  136 LAALRGSGVRGLAGMPYRRDAQGITLVRPWLTAQRAALEQAARSLGLTWCEDPTNSDISLDRNRLRHRVLPALRERWPAVDAALANSAAHASEAHAVLSEYVQAELSGLMAGEGQVDASELSKRSRPRQRLLIRALCQQQGLPTPPQKRLESLLDQLLASADAQVCVEWQGVQARLWRQRLYLMAPLEPLPAWEVSWDGQTPLETPLGPLGWQVALSSPLSQRSSQPLKVTWRQGGEVIELPTRGRRDLKRLLQESNVPPWERGRLVVVMQAEACVGVFQPPDKLLWQAAGVWF 429
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BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: A0A0D6EDN6_9GAMM (tRNA(Ile)-lysidine synthase n=2 Tax=Halomonas TaxID=2745 RepID=A0A0D6EDN6_9GAMM)

HSP 1 Score: 449 bits (1155), Expect = 3.880e-155
Identity = 224/299 (74.92%), Postives = 252/299 (84.28%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEGQVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPPSQPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTRLTS 897
            LAALRGSGLRGLA MP+ R+A+GI LVRPWLS R+A LE AA  L L+WCEDPTN DI  DRNRLRHR+LPA+R+RWP+A+ ALA+SAAH SEAD VLSEY+ AEL  L  GEG V AS   QRSR RQRLLVR LCQQQGLPTPPQKRL+SLL+QLT+K DA+VC+EW GAQARLWRQRLY++APL  LPPWE  WDG+ PL TP+GPLGW + +S    QP S  LRVTWRQGGEVIQLP+RGRRDLKRLLQE+D+PPWERERLVVIMQA+ACIGVICPPA LLWQAEG  F+RLTS
Sbjct:  136 LAALRGSGLRGLAGMPFLREAEGITLVRPWLSVRRAELEAAAGLLELNWCEDPTNQDIRFDRNRLRHRILPALRERWPAADVALANSAAHASEADAVLSEYLAAELVALTTGEGHVDASALRQRSRARQRLLVRTLCQQQGLPTPPQKRLDSLLDQLTAKADAEVCVEWPGAQARLWRQRLYLIAPLEMLPPWEARWDGQAPLETPVGPLGWQLASS----QPHSHVLRVTWRQGGEVIQLPKRGRRDLKRLLQEADMPPWERERLVVIMQADACIGVICPPAKLLWQAEGVAFSRLTS 430
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BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: A0A0C3IKR9_9GAMM (tRNA(Ile)-lysidine synthase n=7 Tax=Halomonas TaxID=2745 RepID=A0A0C3IKR9_9GAMM)

HSP 1 Score: 449 bits (1154), Expect = 5.500e-155
Identity = 224/299 (74.92%), Postives = 249/299 (83.28%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEGQVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPPSQPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTRLTS 897
            LAALRGSGLRGLA MPYRR+A+   LVRPWLS R+A LE AA  L L WCEDPTN DI  DRNRLRHR+LPA+R+RWP+A AALA+SA +  +AD VLSEY+ AEL ELV GEGQ+ AS  SQRSRPRQRLLVR LCQQQGLPTPPQKRLESLL+QL +K  A VC+EW GAQARLWRQRLY+M P  AL  WEV+WDG+TPL TP+GPLGW V +     Q PSQPLR TWRQGGEVIQLP+RGRRDLKRLLQE+D+PPWER+RLVVIMQ EACIGV+CPPA LLWQAEG  FTRLTS
Sbjct:  136 LAALRGSGLRGLAGMPYRREAQSTTLVRPWLSVRRAELEAAAGLLELRWCEDPTNQDIRFDRNRLRHRILPALRERWPTAVAALANSATNAGDADAVLSEYLAAELNELVTGEGQIDASALSQRSRPRQRLLVRTLCQQQGLPTPPQKRLESLLDQLNAKAGAAVCVEWPGAQARLWRQRLYLMVPFEALSSWEVSWDGQTPLETPIGPLGWQVAS----LQEPSQPLRATWRQGGEVIQLPKRGRRDLKRLLQEADMPPWERQRLVVIMQGEACIGVVCPPAQLLWQAEGVCFTRLTS 430
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BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: A0A651DRZ8_HALSX (tRNA(Ile)-lysidine synthase n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651DRZ8_HALSX)

HSP 1 Score: 436 bits (1120), Expect = 7.230e-150
Identity = 216/297 (72.73%), Postives = 254/297 (85.52%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEGQVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPPSQPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTRL 891
            LAALRGSG+RGLA+MPYRR+A+GI L+RPWL+AR+  LE  A+ L LSWC+DPTN DI LDRNRLRHRVLP +R+RWP+A+AALA+SAAH SEAD VLSEYV  ELA+L  GEG++ A    QRSRPRQRLLVRALCQQQGLPTPPQKRLE+LL+QL++K DA VC+EW GAQARLWR++LYV+  +  LP WEV+WDG+TPL TPLGPLGW + A+    Q  +Q LRVTWRQGGEVI LP+RG+RDLKRLLQE++VPPWERERLVV+MQA+ACIGVICPPA LLWQAEG +FT L
Sbjct:  136 LAALRGSGVRGLAAMPYRREAQGITLLRPWLTARRVELEAVAKVLDLSWCDDPTNRDIRLDRNRLRHRVLPVIRERWPAADAALANSAAHASEADLVLSEYVNGELADLHAGEGRLDAVALGQRSRPRQRLLVRALCQQQGLPTPPQKRLETLLDQLSAKADAVVCVEWPGAQARLWREQLYVLTSVDPLPAWEVSWDGQTPLETPLGPLGWRLTAA----QSQAQTLRVTWRQGGEVIHLPRRGKRDLKRLLQEAEVPPWERERLVVVMQAQACIGVICPPAKLLWQAEGVVFTPL 428
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BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: A0A2G2KPU2_HALSX (tRNA(Ile)-lysidine synthase n=3 Tax=Halomonas TaxID=2745 RepID=A0A2G2KPU2_HALSX)

HSP 1 Score: 433 bits (1114), Expect = 6.520e-149
Identity = 217/299 (72.58%), Postives = 244/299 (81.61%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEGQVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPPSQPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTRLTS 897
            LAALRGSGLRGLASMPYRRDA+GI LVRPWL  R+AALEE A SLA++WCEDPTN+DI+LDRNRLRHRVLPAMR+RWP AE ALA+SAAH  EAD +L EY + EL  L+V    + A    + S  RQRLLVR  CQQ GLPTPPQKRLESLL QL +K DA+VC+EW GAQ+RLWRQRLY+M P   LP WE +WDG+T L TP+GPLGW V +     + PSQPLR TWRQGGEVIQLP+RGRRDLKRLLQE+D+PPWER+RLVVIMQ EACIGVICPPA LLWQAEG  FTRLTS
Sbjct:  136 LAALRGSGLRGLASMPYRRDAQGITLVRPWLXVRRAALEETAHSLAVTWCEDPTNSDISLDRNRLRHRVLPAMRERWPEAERALANSAAHAGEADALLCEYAQEELQRLLVDSHYIDAVALGECSLSRQRLLVRTFCQQLGLPTPPQKRLESLLNQLNAKADAEVCVEWPGAQSRLWRQRLYLMVPHEPLPAWEASWDGQTLLETPIGPLGWQVAS----LKEPSQPLRATWRQGGEVIQLPKRGRRDLKRLLQEADMPPWERQRLVVIMQGEACIGVICPPAQLLWQAEGVRFTRLTS 430
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: A0A1A9QZU1_9GAMM (tRNA(Ile)-lysidine synthase n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1A9QZU1_9GAMM)

HSP 1 Score: 432 bits (1112), Expect = 1.720e-148
Identity = 219/302 (72.52%), Postives = 244/302 (80.79%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEGQVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPPS----QPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTRLT 894
            LAALRGSGLRGLA MP+RR+A+GI LVRPWL+ R+A LE AA    LSWCEDPTN DI  DRNRLRHR+LPA+R+RWP+A+ A A+SA H SEAD VLSEY++AEL  L  G GQ+ AS   QRSR RQRLLVR LCQQQGLPTPPQKRLESLL+QLT K DA+VC+EW GAQARLWRQRLY+MAP   LP WE +WDG+ PL TP+GPLGW V +   P    S    Q LR TWRQGGEVIQLP+RGRRDLKRLLQE D+PPWERERLVVIMQAEACIGV+ PPA LLWQA G LFTRLT
Sbjct:  136 LAALRGSGLRGLAGMPFRREAQGITLVRPWLTVRRAELEAAAGLFELSWCEDPTNQDIRFDRNRLRHRILPALRERWPAADVAFANSAVHASEADAVLSEYLQAELVALATGGGQLDASALRQRSRSRQRLLVRTLCQQQGLPTPPQKRLESLLDQLTVKADAEVCVEWPGAQARLWRQRLYLMAPFEPLPLWEASWDGQAPLETPIGPLGWQVASLQKPSHQHSHQHSQVLRATWRQGGEVIQLPKRGRRDLKRLLQEIDMPPWERERLVVIMQAEACIGVVRPPAQLLWQAAGVLFTRLT 437
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: G4FC72_9GAMM (tRNA(Ile)-lysidine synthase n=4 Tax=Halomonas TaxID=2745 RepID=G4FC72_9GAMM)

HSP 1 Score: 427 bits (1099), Expect = 1.980e-146
Identity = 217/304 (71.38%), Postives = 247/304 (81.25%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEGQ------VGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPPSQPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTRLT 894
            LAALRGSG+RGLA MPYRRDA  I L+RPWL+  +AALE+AA+SL L WCEDPTN+DI+LDRNRLRHRVLP +R+RWP A+ ALASSA H SEAD +LSEY + EL  L+  + Q      + A+    RSRPRQRLLVR LCQQQGLPTPPQKRLE+LL+QLT+K DA+VC+EW+GAQARLWRQRLY+MAPL  LP WE NWDG+ PL TP+GPLGW V +     QP SQPLRVTWRQGGEVIQL  RGRRD+KRLLQE++VPPWERERLVVIMQA ACIGVI PP  LLWQAEGA F R T
Sbjct:  136 LAALRGSGVRGLAGMPYRRDAHDITLLRPWLTVGRAALEKAAQSLDLCWCEDPTNSDISLDRNRLRHRVLPTLRERWPEADEALASSAQHASEADNLLSEYAQQELQALLTIDDQCVDNQYLKAAALRARSRPRQRLLVRTLCQQQGLPTPPQKRLENLLDQLTAKVDAKVCVEWQGAQARLWRQRLYLMAPLEPLPAWEANWDGQAPLGTPIGPLGWQVSSLPASSQPSSQPLRVTWRQGGEVIQLLARGRRDVKRLLQEAEVPPWERERLVVIMQASACIGVIAPPGKLLWQAEGARFIRQT 439
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Match: A0A511UNF8_9GAMM (tRNA(Ile)-lysidine synthase n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511UNF8_9GAMM)

HSP 1 Score: 422 bits (1085), Expect = 2.380e-144
Identity = 218/303 (71.95%), Postives = 247/303 (81.52%), Query Frame = 1 
Query:    1 LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWCEDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSEYVEAELAELVVGEG-----QVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRLESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGRTPLITPLGPLGWLVGASLPPFQPP--SQPLRVTWRQGGEVIQLPQRGRRDLKRLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTR 888
            LAALRGSGLRGLA MP RRDA+GIAL+RPWLS R+A LE AA  L LSWC+DPTN DI+LDRNRLRHRVLPA+R+RWPSA AALA+SA H SEADT+L EY + EL  L+VG        + A+   +RSR RQRLLVR LCQQQGLPTPPQKRLESLL+QLT+K DA+VC+EW GAQARLWRQRLY+MAPL  LPPW V+WDG+ PL TPLGPLGW V  S P  Q    +Q L+ TWRQGGE++QL  RGRRDLKRLLQE++VPPWERERLVVI QAEACIGV+ PPA LLWQAEG +FTR
Sbjct:  136 LAALRGSGLRGLAGMPLRRDAQGIALMRPWLSVRRAELEAAAGLLDLSWCDDPTNRDISLDRNRLRHRVLPALRERWPSAAAALANSAEHASEADTLLREYAQEELQTLLVGSQYLDSLSIDATALGERSRSRQRLLVRTLCQQQGLPTPPQKRLESLLDQLTAKADAEVCVEWSGAQARLWRQRLYLMAPLPTLPPWAVSWDGQAPLETPLGPLGWQVMLSPPGAQHSCYAQRLQATWRQGGEMMQLAGRGRRDLKRLLQEAEVPPWERERLVVIHQAEACIGVVRPPAQLLWQAEGVVFTR 438
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14108.2436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D5M841_9GAMM4.360e-15977.26tRNA(Ile)-lysidine synthase n=3 Tax=Halomonas TaxI... [more]
A0A0F9YLW3_9ZZZZ4.670e-15977.18tRNA(Ile)-lysidine synthetase n=1 Tax=marine sedim... [more]
A0A101D4C4_9GAMM4.720e-15776.53tRNA(Ile)-lysidine synthase n=1 Tax=Halomonas sp. ... [more]
A0A0D6EDN6_9GAMM3.880e-15574.92tRNA(Ile)-lysidine synthase n=2 Tax=Halomonas TaxI... [more]
A0A0C3IKR9_9GAMM5.500e-15574.92tRNA(Ile)-lysidine synthase n=7 Tax=Halomonas TaxI... [more]
A0A651DRZ8_HALSX7.230e-15072.73tRNA(Ile)-lysidine synthase n=1 Tax=Halomonas sp. ... [more]
A0A2G2KPU2_HALSX6.520e-14972.58tRNA(Ile)-lysidine synthase n=3 Tax=Halomonas TaxI... [more]
A0A1A9QZU1_9GAMM1.720e-14872.52tRNA(Ile)-lysidine synthase n=2 Tax=unclassified H... [more]
G4FC72_9GAMM1.980e-14671.38tRNA(Ile)-lysidine synthase n=4 Tax=Halomonas TaxI... [more]
A0A511UNF8_9GAMM2.380e-14471.95tRNA(Ile)-lysidine synthase n=1 Tax=Halovibrio var... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14108contigE-siliculosus-1a_F_contig14108:271..1170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size900
Model size900
Exons1
Hectar predicted targeting categorymitochondrion
BRITEko00000,ko01000,ko03016
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.D
EC6.3.4.19
EggNOG OGs1MU85@1224,1RN14@1236,1XJH7@135619,COG0037@1,COG0037@2
EggNOG free text desc.Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GOsGO:0002097,GO:0002101,GO:0002136,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016879,GO:0032267,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
KEGG ReactionR09597
KEGG koko:K04075,ko:K14058
KEGG rclassRC02633,RC02634
Preferred nametilS
Seed eggNOG ortholog1504981.KO116_0454
Seed ortholog evalue1.1e-127
Seed ortholog score463.0
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927926.622183-CDS-E-siliculosus-1a_F_contig14108:270..11701622927926.622183-CDS-E-siliculosus-1a_F_contig14108:270..1170Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14108 271..1170 -
1696318740.2218978-CDS-E-siliculosus-1a_F_contig14108:270..11701696318740.2218978-CDS-E-siliculosus-1a_F_contig14108:270..1170Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14108 271..1170 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14108.2436.1prot_E-siliculosus-1a_F_contig14108.2436.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14108 271..1170 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14108.2436.1

>prot_E-siliculosus-1a_F_contig14108.2436.1 ID=prot_E-siliculosus-1a_F_contig14108.2436.1|Name=mRNA_E-siliculosus-1a_F_contig14108.2436.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=300bp
LAALRGSGLRGLASMPYRRDAKGIALVRPWLSARKAALEEAAESLALSWC
EDPTNTDIALDRNRLRHRVLPAMRQRWPSAEAALASSAAHVSEADTVLSE
YVEAELAELVVGEGQVGASTFSQRSRPRQRLLVRALCQQQGLPTPPQKRL
ESLLEQLTSKPDAQVCIEWEGAQARLWRQRLYVMAPLAALPPWEVNWDGR
TPLITPLGPLGWLVGASLPPFQPPSQPLRVTWRQGGEVIQLPQRGRRDLK
RLLQESDVPPWERERLVVIMQAEACIGVICPPATLLWQAEGALFTRLTS*
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mRNA from alignment at E-siliculosus-1a_F_contig14108:271..1170-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14108.2436.1 ID=mRNA_E-siliculosus-1a_F_contig14108.2436.1|Name=mRNA_E-siliculosus-1a_F_contig14108.2436.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=900bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14108:271..1170- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTTGCGGCCCTGCGCGGCAGCGGTTTACGCGGCTTAGCGAGTATGCCCTA
TCGGCGCGACGCCAAGGGCATTGCTCTGGTGCGCCCATGGCTATCGGCGC
GCAAGGCAGCACTTGAGGAAGCCGCGGAGTCGCTCGCTCTTAGCTGGTGC
GAAGACCCTACCAATACCGACATCGCACTTGATCGCAACCGTTTGCGTCA
CCGGGTGCTACCTGCGATGCGTCAGCGCTGGCCATCGGCAGAAGCTGCGT
TGGCAAGTAGCGCTGCCCATGTCAGTGAGGCAGATACGGTGCTTAGCGAG
TACGTAGAAGCCGAACTGGCAGAGCTCGTGGTCGGGGAGGGGCAGGTGGG
TGCGAGCACGTTTAGTCAGCGATCTCGTCCACGCCAGCGGCTGCTGGTGC
GCGCACTCTGTCAGCAGCAGGGGTTGCCAACACCGCCGCAAAAGCGCCTT
GAAAGCCTGCTAGAGCAACTTACGTCAAAACCGGATGCCCAGGTATGCAT
TGAGTGGGAAGGCGCTCAGGCGCGCCTGTGGCGCCAGCGGCTCTATGTTA
TGGCGCCGTTGGCAGCATTGCCACCATGGGAAGTGAACTGGGATGGGCGA
ACGCCTCTAATAACACCGCTGGGCCCGTTAGGCTGGTTGGTAGGGGCATC
GTTGCCACCTTTTCAACCGCCATCTCAGCCATTGAGGGTGACCTGGCGGC
AGGGGGGAGAAGTCATTCAGCTGCCACAGCGGGGCCGGCGTGATCTAAAA
CGCCTGCTGCAAGAAAGTGATGTGCCACCCTGGGAGCGTGAGCGGCTAGT
GGTGATTATGCAGGCAGAGGCCTGTATTGGCGTAATTTGCCCACCTGCCA
CGTTGCTTTGGCAGGCTGAGGGAGCTCTGTTCACCCGCCTGACGTCTTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14108:271..1170-

>mRNA_E-siliculosus-1a_F_contig14108.2436.1 ID=mRNA_E-siliculosus-1a_F_contig14108.2436.1|Name=mRNA_E-siliculosus-1a_F_contig14108.2436.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1800bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14108:271..1170- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTTGCGGCCCTGCGCGGCAGCGGTTTACGCGGCTTAGCGAGTATGCCCTA
TCGGCGCGACGCCAAGGGCATTGCTCTGGTGCGCCCATGGCTATCGGCGC
GCAAGGCAGCACTTGAGGAAGCCGCGGAGTCGCTCGCTCTTAGCTGGTGC
GAAGACCCTACCAATACCGACATCGCACTTGATCGCAACCGTTTGCGTCA
CCGGGTGCTACCTGCGATGCGTCAGCGCTGGCCATCGGCAGAAGCTGCGT
TGGCAAGTAGCGCTGCCCATGTCAGTGAGGCAGATACGGTGCTTAGCGAG
TACGTAGAAGCCGAACTGGCAGAGCTCGTGGTCGGGGAGGGGCAGGTGGG
TGCGAGCACGTTTAGTCAGCGATCTCGTCCACGCCAGCGGCTGCTGGTGC
GCGCACTCTGTCAGCAGCAGGGGTTGCCAACACCGCCGCAAAAGCGCCTT
GAAAGCCTGCTAGAGCAACTTACGTCAAAACCGGATGCCCAGGTATGCAT
TGAGTGGGAAGGCGCTCAGGCGCGCCTGTGGCGCCAGCGGCTCTATGTTA
TGGCGCCGTTGGCAGCATTGCCACCATGGGAAGTGAACTGGGATGGGCGA
ACGCCTCTAATAACACCGCTGGGCCCGTTAGGCTGGTTGGTAGGGGCATC
GTTGCCACCTTTTCAACCGCCATCTCAGCCATTGAGGGTGACCTGGCGGC
AGGGGGGAGAAGTCATTCAGCTGCCACAGCGGGGCCGGCGTGATCTAAAA
CGCCTGCTGCAAGAAAGTGATGTGCCACCCTGGGAGCGTGAGCGGCTAGT
GGTGATTATGCAGGCAGAGGCCTGTATTGGCGTAATTTGCCCACCTGCCA
CGTTGCTTTGGCAGGCTGAGGGAGCTCTGTTCACCCGCCTGACGTCTTGA
CTTGCGGCCCTGCGCGGCAGCGGTTTACGCGGCTTAGCGAGTATGCCCTA
TCGGCGCGACGCCAAGGGCATTGCTCTGGTGCGCCCATGGCTATCGGCGC
GCAAGGCAGCACTTGAGGAAGCCGCGGAGTCGCTCGCTCTTAGCTGGTGC
GAAGACCCTACCAATACCGACATCGCACTTGATCGCAACCGTTTGCGTCA
CCGGGTGCTACCTGCGATGCGTCAGCGCTGGCCATCGGCAGAAGCTGCGT
TGGCAAGTAGCGCTGCCCATGTCAGTGAGGCAGATACGGTGCTTAGCGAG
TACGTAGAAGCCGAACTGGCAGAGCTCGTGGTCGGGGAGGGGCAGGTGGG
TGCGAGCACGTTTAGTCAGCGATCTCGTCCACGCCAGCGGCTGCTGGTGC
GCGCACTCTGTCAGCAGCAGGGGTTGCCAACACCGCCGCAAAAGCGCCTT
GAAAGCCTGCTAGAGCAACTTACGTCAAAACCGGATGCCCAGGTATGCAT
TGAGTGGGAAGGCGCTCAGGCGCGCCTGTGGCGCCAGCGGCTCTATGTTA
TGGCGCCGTTGGCAGCATTGCCACCATGGGAAGTGAACTGGGATGGGCGA
ACGCCTCTAATAACACCGCTGGGCCCGTTAGGCTGGTTGGTAGGGGCATC
GTTGCCACCTTTTCAACCGCCATCTCAGCCATTGAGGGTGACCTGGCGGC
AGGGGGGAGAAGTCATTCAGCTGCCACAGCGGGGCCGGCGTGATCTAAAA
CGCCTGCTGCAAGAAAGTGATGTGCCACCCTGGGAGCGTGAGCGGCTAGT
GGTGATTATGCAGGCAGAGGCCTGTATTGGCGTAATTTGCCCACCTGCCA
CGTTGCTTTGGCAGGCTGAGGGAGCTCTGTTCACCCGCCTGACGTCTTGA
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