mRNA_E-siliculosus-1a_F_contig141.2425.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig141.2425.1
Unique NamemRNA_E-siliculosus-1a_F_contig141.2425.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: D8LE84_ECTSI (CLP1_P domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE84_ECTSI)

HSP 1 Score: 1326 bits (3431), Expect = 0.000e+0
Identity = 689/738 (93.36%), Postives = 699/738 (94.72%), Query Frame = 1
Query:    1 GKVHRVAGGVSAAADDAPGAIVVGLDALEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRALDAEERPDVALARGSTATDDAGAANDDKMENEIEEAIDRIAEHFPVVVVLKSLSGRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPLQSNRRRGLQTAEGGELGGGQKDDTETAATGSPPPVASGCTGDVLDDNFAAELRLPGMQVVTTEAAGLRPLTIPQDWANAIDAVLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSSPPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGLVAMARQPWEGGRSGSFGGGAEPPPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVMLYDPNWCSHPYFSSEVVGGGVIKNRNNLLRRGGQHA 2214
            GKVHRVAGGVSAAADDAPGA+VVGL +LEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRALDAE+RPDVA+ARGS ATDDAGAANDDKMENEIEEAIDRIAEHFPVVVV KSLSGRSPLKFLSAQADADALYAPSIGADDSSDPVAESQP QSNRRRGLQTAEGGELGGG +DDTETA T SPPPVASGCTGDVLD +FAAELRLPGMQVVTTE AGLRPLT+PQDWANAIDAVLASPPRPAGGGSNDS LVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGA  XXX                TPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPE CEVHRVG WSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQG RGCGD  PGGVSPGCLSG +EA ATAAAVAGRQRGAGSAV+G EDSSVA GLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGLVAMARQPWEGGRSGS GGGAE PPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLR+VNVLVMGPLQLPMVMLYDPNWCSHPYFSSEVVGGGVIKNRNNLLRRGGQHA
Sbjct:   95 GKVHRVAGGVSAAADDAPGALVVGLHSLEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRALDAEDRPDVAIARGSIATDDAGAANDDKMENEIEEAIDRIAEHFPVVVVFKSLSGRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPPQSNRRRGLQTAEGGELGGGHQDDTETATTCSPPPVASGCTGDVLDGSFAAELRLPGMQVVTTEVAGLRPLTLPQDWANAIDAVLASPPRPAGGGSNDSVLVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAXXXXXXXXXXXXXXXXXXXXXTPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEECEVHRVGVWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGTRGCGDVFPGGVSPGCLSGGAEAVATAAAVAGRQRGAGSAVTGTEDSSVASGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGLVAMARQPWEGGRSGSVGGGAERPPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLRDVNVLVMGPLQLPMVMLYDPNWCSHPYFSSEVVGGGVIKNRNNLLRRGGQHA 832          
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: A0A836CLB9_9STRA (CLP1_P domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB9_9STRA)

HSP 1 Score: 254 bits (648), Expect = 1.340e-68
Identity = 279/952 (29.31%), Postives = 370/952 (38.87%), Query Frame = 1
Query:    1 GKVHRVAGGVSAAADDAPGAIVVGLDALEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRALDAEERPDVALARGSTATDDAGAA-----------------------NDDKMENEIEEAIDRIAEHFPVVVVLKSLSGRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPLQSNRRRGLQTAEGGELGGGQKDDTETAATGSPPPVA--------SGCTGDVL--DDNFAAELRLPGMQVVTTEAAGLRPLTIPQDWANA--------------IDAVLAS---------------------------------PPRPA-----GGGS----NDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSSPPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQ-------------------------------------------------------------------ILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPS--PQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRA-VQIRIMNGS---VSPSLVLHAINGALVGLVAMARQ------------------------PWEGGRSGSFGGGAEPPPGEGLVCLAETPLAPCVGLGI-----------------------VRSVDV---EKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVMLYDPNWCSHPYFSSEVV---GGGVIKNRNNLLRRGGQH 2211
            GKV RV G       DA G +VV L+  E+LCFVG+ALVR GRG A + G  L     G Y E               +++ + + A+   S A+  A A                          + +E  +E A + +   +  V++ + L   SP  FLSA ADAD LY      D               R  GL T E G +GG           G P  VA         G    ++  D   A  LR   + V      G+ PL +P DWA A              + AV+ S                                 PP PA      G +      SAL CGA+G GKSTLCR+LANR+L RH  +A+MDCD GQPE TPPG VS+H+L  P++GPPH +L+H  +++F+G+++SK EP+LYSA VRALA+                A  L            PLVVNTDGWVKGMG +LLGA++D V P HI Q                                                                   ++G + A+S  L+  R+P+GC VH + + S   V  G    P   S    DQRTLRL+AYF                                                            +  +D           L   ++RGG   D  H +A  LA+ RP  VP+   +++R+M  +   V P L  +A+N ALVGL+A                            P       +F G    PP    VCLAE  +APCVGLGI                          VDV   +K +LY+LTP  P+ L  V +L  G L  P  +L+D   C HPYFS E +   GG  +++RNNL RRG  H
Sbjct:  192 GKVVRVGG----EGRDARG-LVVALEPGERLCFVGSALVRSGRGCASVCGHVLQQAPRGAYAE---------------ESQNQRNAAVHSDSAASHRARARAPXXXXXXXXXXXXXXXXXXXXXXXEALEAALEAAAETVPGQYGTVLLFRPLPP-SPASFLSAAADADGLYQRRERGDRGG-----------TRVWGLDTEEEG-IGGXXXXXXXXXXAG-PVAVARALRLRGLQGVPRSLIHVDTILAHRLRRAQVVVDALSTVGVEPLDVPADWAAAAEVRARCRRRLRARVTAVVMSALAHLERLWCERVALPFLHCCSDAQRTDRLGRLPPTPACLAVAAGRAVALRGASALACGARGAGKSTLCRYLANRLLARHAAIAFMDCDAGQPELTPPGMVSVHILRRPLLGPPHTHLQHAEVSFFLGSSSSKAEPMLYSARVRALAD-----------WYRAHASHL------------PLVVNTDGWVKGMGHELLGAIVDVVAPDHIFQWVLDDGCEVDDAAREGTAHGGPVGGFPGGAACEIAARYGRMPLLLTGEENVAFRRSRCGHAIDHQAALMGATPARSPLLE--RVPQGCRVHELKSRSLEAVVDGAAAAPVHRSNLASDQRTLRLLAYFF-----------------------------------------------------------QAPLDPPAAAPPHDYGLGAVAVRGGTAVDRAHAMAAALAAQRPYAVPWAPPLRVRLMGDAGAGVPPRLAPYALNAALVGLIAAXXXXXXXXXXXXXXXXXXXXXXXXXAAPAVVPADCAFRGPIFTPP---PVCLAEDVVAPCVGLGIGPAGAYVEELLLPLSLSDGGNCSATGVDVVACQKGLLYILTPVDPQRLSTVTLLCKGSLHPPTELLFDAARCCHPYFSMEALTSGGGATMRSRNNL-RRGAGH 1021          
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: A0A6G0X2K6_9STRA (CLP1_P domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2K6_9STRA)

HSP 1 Score: 236 bits (603), Expect = 4.270e-65
Identity = 213/722 (29.50%), Postives = 319/722 (44.18%), Query Frame = 1
Query:   64 VVGLDALEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRALDAEERPDVALARGSTATDDAGAANDDKMENEIEEAIDRIAEH----FPVVVVLKSLSGRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPLQSNRRRGLQTAEGGELGGGQKDDTETAATGSPPPVASGCTGDVLDDNFAAELRLPGMQVVTTEAAGLRPLTIPQDWANAIDAVLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSSPPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGLVAMARQPWEGGRSGSFGGGAEPPPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVMLYDPNWCSH-PYFSSEVV-----GGGVIKNRNNLLRR 2199
            V+G++  EKL   G   +R  +G+  + G+ + P   G Y +  SPRW  L+ ++A D    P  A     T        ++D ++   E A D +A+     FP+V+VL+++        LS+  DA AL     G           + L+S +   L+TA           D  T A      V S  T                    T E   ++ + +P  W +++ ++L S      G SN   LVCGAKGVGKST  R+L NR+L  HR VAY+D D+GQPE   PG +SLH + TP++GP + +L+    +YF G ++ K +P LY   V                      E L + +A S   + PLV+NTDGW+K MG DLL A + A  P H+VQ++  S AKSF++ ++       +H +  W   P      P P+R S ++ R  RL AYFLG           +P  VS                                           LV+        S + R+  +           ++ +     P RVPF  V +R    SV PS VLH +NG++VGL                      P  +G + + + P+ PCVG GIVRS+DVE+R  +++TP PP++L+ VN+LV G + L   +L       H PY   +V+     G  ++++RNNL R+
Sbjct:   34 VIGMELNEKLVGAGMVHLRVFQGEVSILGYNV-PR--GIYFDLFSPRWSNLMAIQASDTSTAPFQAPCSNLTVKR-WKLTHNDPIDPTDEAAADTLAQEIAMRFPIVLVLRAM--HLTYGNLSSYFDATALSDALPGFRIIRHKEVNVEKLKSKK---LKTAS----------DAHTDAL----TVFSSIT--------------------TIEPHPVKEILVPPSWTSSVASILES-----FGESNRKVLVCGAKGVGKSTFSRYLVNRLLNVHRVVAYLDTDVGQPELAAPGVLSLHFITTPLLGPGYTHLQPAFRSYFFGFSSPKADPTLYMNGV----------------------EALVAAYA-SHDTSIPLVINTDGWIKSMGYDLLNATLTATSPAHVVQVVALSKAKSFDVPIS---SEWTLHPIEMWDADP------PQPTRSS-KELRQFRLHAYFLGDVP--------VPDNVS-------------------------------------------LVNVHCT----SEQTRYGRL-----------LSTIYPQQVPYRVPFANVALRFSGASVPPSQVLHVLNGSVVGLCIHPHDV--------------KPANDGPLVILDNPMVPCVGHGIVRSIDVERREYHIVTPVPPKILQHVNLLVRGHISLAFQLLDQSAVYGHTPYVVIDVLPAEGTGASLMESRNNLKRK 594          
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: A0A5D6XJ55_9STRA (CLP1_P domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ55_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.670e-61
Identity = 221/734 (30.11%), Postives = 321/734 (43.73%), Query Frame = 1
Query:   61 IVVGLDALEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRA-LDAEERPDVA--------------LARGSTATDDAGAANDDKMENEIEEAIDRIAEHFPVVVVLKSLSGRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPLQSNRRRGLQTAEGGELGGGQKDDTETAATGSPPPVASGCTGDVLDDNFAAELRLPGMQVVTTEAAGLRPLTIPQDWANAIDAVLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSS-PPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGLVAMARQPWEGGRSGSFGGGAEPPPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVMLYDPNWCSHPY-----FSSEVVGGGVIKNRNNLLRR 2199
            +V+G+     +   G AL R  +G  ++ GF     A G Y    SPRW  LLVL    +A+ R   A               +R   A  +  A  D   E++ +     IAE FP+V+V +++    P+ F +  +  +   AP  GA            +    +  L   +  EL  G   D +  A   PP   S       D   +A +           A   R + I   W   +DA+ AS    AGG +  S +VCGAKGVGKST CR+L NR+L  +  VA++D DLGQ E TPPG VSLH L  P++GP  A+++ P  ++F G      +PL Y  AVR+L    +                 A++ AG+   P  PLV+NTDGW+K MG DLL +VI    P H+VQ+L T+  K F +          +H V  W P    +G  P P   + +D R  R  AYFLG+                            +AA +A +QR                     L D   V        RH +         D  ++       P  VPF  V +     SV PS +LH++N ++VGL    R+P    +    G  A PP       L E P APC+G+G+VR+VD E+R+L++++P    V+R VN+LV G L L  + +   +    PY      ++E  G  V+++RNN+ R+
Sbjct:   44 VVLGMRVDAAINCAGMALFRVFQGHVEVLGFQ---PALGTYYSLFSPRWSNLLVLSGRTNADTRSHAAKQLLGAAYQAPFCDASRRLLALAEPAAVVDMDDEHDADALARDIAEEFPIVLVFRAV----PVTFGNVVSYYERSRAPDAGA-----------VVLPGFKIVLAKEDWQELRVG---DADADAALGPPAGLSPVELQYHDWKSSARVLAE-----LAHADAYRTIQITPQWRATVDAIEAS--LRAGGWAAQSVVVCGAKGVGKSTFCRYLVNRLLAHYGAVAFLDTDLGQSELTPPGLVSLHALAAPLLGPGFAHMKPPLRSFFCGGANPGTDPLYYMRAVRSLLRLYA-----------------ATWGAGAGRQPPMPLVINTDGWIKSMGHDLLCSVIQDAAPDHVVQLLATTKNKQFTVPTD---PKWTIHGVPPWDP----TGLLPLPR--ASKDMRLYRWHAYFLGR---------------------------RSAAHLAAQQR---------------------LQDLHLVA------ERHRA---------DGAISRAYTLVAPFAVPFDCVDVSFAGSSVPPSQLLHSLNNSVVGLCVNPRRPQP--QPQLVGRPAGPPR-----VLLEPPHAPCLGIGLVRAVDAERRLLFIVSPLALAVVRRVNLLVRGNLALESIAVDVESPVQAPYVVTDGLAAEGTGAAVMQSRNNIKRK 653          
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: A0A485KJZ3_9STRA (Aste57867_8325 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJZ3_9STRA)

HSP 1 Score: 225 bits (573), Expect = 9.980e-61
Identity = 208/731 (28.45%), Postives = 322/731 (44.05%), Query Frame = 1
Query:   61 IVVGLDALEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRALDAEERPDVALARGSTATDDAGAAND--DKMENEIEEAIDRIAEH----FPVVVVLKSLS---GRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPLQSNRRRGLQTAEGGELGGGQKDDTETAATGSPPPVASGCTGDVLDDN--FAAELRL-PGMQVVTTEAAGLRPLTIPQDWANAIDAVLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSSPPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGLVAMARQPWEGGRSGSFGGGAEPPPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVMLYDPNWCSH-PY-----FSSEVVGGGVIKNRNNLLRR 2199
            +++G+++ EKL   G   +R  +G A + GF   P   G Y +  SPRW  L+ + A +   +  +  A  +T T    AA    D ++   E A D +A+     FPVV+V +++    G     F     ++ A      G       VA S  + S  ++    A+                              V DD+  +  E  L P +   + E   +R L  P  W +A   +LAS    A   +N   LVCGAKGVGKST  R++ NR+L  HR VAY+D D+GQPE   PG +SLH + TP++GP + +L+  + +YF G ++ K +P +Y  A+ AL                     L ++ A  +    PLV+NTDGW+K MG DLL + + A  P H+VQ++  S AKSF++  + L    ++H +  W   P      P P+R S ++ R  RL  YFLG         + +P  V    L   SE                                                      R G++      ++ +    RP  VPF  + +R+   SV PS +LH +NG++VGL              SF     P   +G + + + P+APCVG GIVRS+D+E++  ++LTP P  +L+ VN+ + G + L   +L       H PY      ++E  G  ++++RNNL R+
Sbjct:   31 VIIGMESHEKLVGAGMVHMRVFQGAATMFGFVAPP---GIYFDLFSPRWSNLMAIHATEPAVQSPLFQAPCTTLTQKRWAATHPTDPLDLAEEGAADALAKSIATLFPVVLVFRAMHPTYGNLSSYFDGNMTESTAAAVGLPGFKFIRHKVASSDKVVSKPKKFKGAAK------------------------------VNDDSVIYHGESTLFPSLS--SLEPHPVRELLFPSTWTHATADILASFATEA---TNRKVLVCGAKGVGKSTFSRYVVNRLLSTHRVVAYLDTDVGQPELAAPGVLSLHYVVTPLLGPGYTHLQPAYRSYFFGFSSPKADPSMYMDAIHAL---------------------LDAYAARDT--TIPLVINTDGWIKSMGYDLLHSTLTAATPAHVVQVVALSKAKSFDVPPSSL---WKLHPIEMWDADP------PQPARSS-KELRQFRLHEYFLGH--------EPIPPTVPLLNLHCTSE----------------------------------------------------QTRYGRL------LSTIYPQQRPYCVPFDKIALRVSGASVPPSHILHVLNGSIVGLCVHP----------SF----RPKDAQGPLVVLDNPMAPCVGHGIVRSIDIERQEFHILTPLPLSILQHVNLFIRGHISLAFQLLDQSAVYGHTPYAIVDVLAAEGTGASLMESRNNLKRK 610          
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: A0A024TF99_9STRA (CLP1_P domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TF99_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.120e-59
Identity = 209/730 (28.63%), Postives = 328/730 (44.93%), Query Frame = 1
Query:   61 IVVGLDALEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRALDAE---ERPDVALARGS---TATDDAGAANDDKMENEIEEAIDR-IAEHFPVVVVLKSLSGRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPLQSNRRRGLQTAEGGELGGGQKDDTETAATGSPPPVASGCT----GDVLDDNFAAELRLPGMQVVTTEAAGLRPLTIPQDWANAIDAVLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSSPPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGLVAMARQPWEGGRSGSFGGGAEPPPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVML-YDPNWCSHPY-----FSSEVVGGGVIKNRNNLLRR 2199
            +V+G++  EKL   G A +R  +G   + G+   P   G YV+  SPRW  L+ +  + +    + P  +L +     T  DD+ A     +E    +A+ + IA  FP+V++++S+  R     LS+  DA      S G      P+   + ++   +    T E        K   +    G+P     G      G+ +D  FA+        V + E   +R + IP  W+    ++L +        SN   LVCGAKGVGKST  R+L N++L  +  VAY+D D+GQPE   PG +SLH + TP++GP + +L+  + +YF G ++ K +P +Y  A+ AL                     L  + A     A PLV+NTDGW+K MG DLL A + A  P+H+VQ++  S AKSFE+  +  P+   +H +  W   P      P P+R S ++ R  RL AYFLG+          +P  V    +   SE                                               + R+  +           ++ +     P RVPF  V +R+  GSV PS +LH +N ++VGL      P+E     +   G           + + P+ PCVG GIVRS+DV++   ++LTP P E+L+ VN+LV G + L   +L     +   PY      ++E  G  ++++RNNL R+
Sbjct:   36 VVIGMEVHEKLVCAGMAHLRVFQGGVSMLGYEAKP---GVYVDVFSPRWSNLMSITGIASTSVFQAPCSSLVQAHWNLTHEDDSLAM----VEEGAADALAKDIAVRFPIVLIIRSM--RVTYGNLSSYFDAG-----STGTSGGGVPLPGFKFIR--HKNMTHTVE--------KTKIKKPKHGAPATNFDGSLVVYHGESVD--FAS--------VTSLEPHPVREILIPPTWSTVASSILEN----LAASSNRKVLVCGAKGVGKSTFSRYLVNQLLNVYSIVAYLDTDVGQPELAAPGVLSLHYITTPLLGPGYTHLQPAYRSYFFGFSSPKADPTVYMDAISAL---------------------LNDYSA--KDLAIPLVINTDGWIKSMGYDLLQATLTAASPKHVVQVVALSKAKSFEVPAS--PQWT-LHPIEMWDVEP------PQPAR-SGKELRQFRLHAYFLGR--------IPVPSHVPLQSIHCTSE-----------------------------------------------QTRYTRL-----------LSTIYPQQIPYRVPFSKVNLRVSGGSVPPSQILHVLNASVVGLCI---HPFEMASDATEHNGPR--------AVVDNPIVPCVGHGIVRSIDVDRHEFHILTPVPIEILQHVNLLVRGHISLAFQLLDQSAVYGCAPYVVVDVLAAEGTGASLMESRNNLKRK 617          
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: W4FJX1_9STRA (CLP1_P domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJX1_9STRA)

HSP 1 Score: 219 bits (559), Expect = 9.250e-59
Identity = 210/727 (28.89%), Postives = 320/727 (44.02%), Query Frame = 1
Query:   61 IVVGLDALEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRALDAE---ERPDVALARGS---TATDDAGAANDDKMENEIEEAIDRIAEHFPVVVVLKSLSGRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPLQ-SNRRRGLQTAEGGELGGGQKDDTETAATGSPPPVASGCTGD-VLDDNFAAELRLPGMQVVTTEAAGLRPLTIPQDWANAIDAVLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSSPPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGLVAMARQPWEGGRSGSFGGGAEPPPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVML-YDPNWCSHPY-----FSSEVVGGGVIKNRNNLLRR 2199
            +V+G++A EKL   G   +R  +G   + GF       G Y++  SPRW  LL ++ +      + P  +L       T  DD     D   E E +     IA  FP+V+V +S+        L++  D      PS   +D   P+   + ++  N    L                +   T      AS   G  VL    + +       + + E   +R + IP  W+    ++L S    A    N   LVCGAKGVGKST  R++ NR+L  +  VAY+D D+GQPE   PG +SLH + +P++GP + +L   + +YF G ++ K +P +Y  A+ AL                     L  + A  S    PLV+NTDGW+K MG DLL A + A  P H+VQ++  S AKSF++ L+  P+   +H +  W   P      P P+R S ++ R  RL AYFLG+          +P  VS   +   SE                                               + R+  +           ++ +     P RVPF  V +R+  GSV PS +LH +N ++VGL      P+E     + GG          V + + P+ PCVG GIVRS+DVE+R  ++LTP P E+L+ VN+LV G + L   +L     + + PY      ++E  G  ++++RNNL R+
Sbjct:   31 VVIGMEAEEKLVGAGMVHLRVFQGGVSILGFHAKA---GAYLDVFSPRWSNLLSIQGIATTSVFQSPCTSLTEAHWNLTHVDDRLTMAD---EAEADALAKDIAVRFPIVLVFRSM--HVTYGNLASYFDGGP---PSATTNDMVVPMPGFKFIRHKNAAHAL----------------DKPKTKKAKHAASNADGSSVLYHGESVDFT----SITSLEPHPVREILIPPTWSKVAASILDSMATSA----NRKMLVCGAKGVGKSTFSRYVVNRLLNVYPMVAYLDTDVGQPELAAPGVLSLHYITSPLLGPGYTHLEPAYRSYFFGFSSPKADPTVYMEAISAL---------------------LNDYAAKDS--TIPLVLNTDGWIKSMGYDLLQATLSAATPEHVVQVVALSKAKSFDVPLS--PQWT-LHPIEMWDIEP------PQPAR-SGKELRQFRLHAYFLGRVP--------VPSHVSLQNIHCTSE-----------------------------------------------QTRYTRL-----------LSTIYPQQAPYRVPFSKVGLRVSGGSVPPSQILHVLNASVVGLCC---HPYEIKPDATNGG---------PVTVLDNPMVPCVGHGIVRSIDVERREFHILTPVPFEILQHVNLLVRGHISLAFQLLDQSAVYGTTPYAVVDVLAAEGTGASLMESRNNLKRK 611          
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: K3WRU7_GLOUD (CLP1_P domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRU7_GLOUD)

HSP 1 Score: 219 bits (557), Expect = 5.260e-58
Identity = 221/742 (29.78%), Postives = 322/742 (43.40%), Query Frame = 1
Query:   58 AIVVGLDALEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRA--------------LDAEERPDVALARGSTAT--DDAGAANDDKMENEIEEAIDR-IAEHFPVVVVLKSLS---GRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPLQSNRRRGLQTAEGGELGGGQKDDTETAATGSPPPVASGCTGDVLDD--NFAAELRLPGMQVVTTEAAGLRPLTIPQDWANAIDAVLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSSPPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGL-VAMARQPWEGGRSGSFGGGAEPPPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVMLYDPNWCSHPY-----FSSEVVGGGVIKNRNNLLRR 2199
            A+V+G+     +   G AL+R  +G  +L GF     A G Y   ++P+W  L+V+                LDA  +   + A  S  T  + A AA  +  E    +A+ + IAE FP+V+V +S+    G +   + S+ A+A  L   S             Q +    +  +   E  EL        +TAA G     A    G  L    ++ + +R+     V   A   R + I   W +  DA+ +S             +VCGAKGVGKST CR+L NR+L  +  VA++D DLGQ E TPPG VSLH L +P++GP   +++ P  A+F G T    +PL Y  AV++L  R  E   G  +    +A+              PLV+NTDGW+K MG DLL AVI    P H+VQ+L T+  K F +  +      +VH V  W      S G   PSR S +D R  R   YFL Q                                                                ++       L   S +      +D ++    A   P  V F AV +     SV+PS  L ++N ++VGL + +AR+P     S S  G    PP      L +   APC+G+G++R+VDVE RVLYVL+P P  +L  VN+LV G   L  ++L   +  + PY      SSE  G  V+++RNN+ R+
Sbjct:   45 AVVLGMRVDAAINCAGMALMRVFQGHVELLGFQ---PALGSYYSLYAPKWNSLVVIEGRTNANTRSEATKQLLDAAYQAPYSDASRSLLTLIEPAAAAALEMDEEHAADALAKEIAEEFPIVLVFRSVPVSFGNATCYYESSSANATFLEKDSSA-----------QVVLPGFKIIVAKEEYAEL--------QTAAAGVEKEEAPKVPGSDLQQYHDWKSSVRVLSELFV---ADAFRTIQITPQWKDTADAIESSLLANNNEKRQQRIVVCGAKGVGKSTFCRYLVNRLLSHYGMVAFLDTDLGQSELTPPGLVSLHALVSPLLGPGFTHMKSPLRAFFCGATNPGNDPLYYMQAVKSLL-RVYEAKWGSTDSKPKQAD-------------VPLVINTDGWIKSMGHDLLCAVIQDANPDHVVQLLATTKNKQFTVPSS---PSWKVHGVEPWD-----SFGATQPSRSS-KDMRLYRWHHYFLAQS----------------------------------------------------------FCTTTQLPRAQLQNLHTISEKN----RIDDQICRAFARLTPYVVSFDAVDVSFAGSSVAPSQSLFSLNNSIVGLCINVAREPLH--ESSSRTG----PPR----ILLKPAHAPCLGVGLIRAVDVEARVLYVLSPLPINMLARVNLLVRGNFPLEALVLGSSS-ANEPYVVTDVLSSEGTGAAVMQSRNNIKRK 665          
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: A0A6A5AXT1_9STRA (CLP1_P domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AXT1_9STRA)

HSP 1 Score: 202 bits (514), Expect = 7.500e-54
Identity = 161/521 (30.90%), Postives = 242/521 (46.45%), Query Frame = 1
Query:  679 VVTTEAAGLRPLTIPQDWANAIDAVLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSSPPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSP--------SLVLHAINGALVGLVAMARQPWEGGRSGSFGGGAEPPPGEGLVCLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVML-YDPNWCSHPY-----FSSEVVGGGVIKNRNNLLRR 2199
            + + E   +R + IP  W+    ++L S    A    N   LVCGAKGVGKST  R++ NR+L  +  VAY+D D+GQPE   PG +SLH + +P++G  + +L   + +YF G ++ K +P +Y  A+ AL                     L  + A  S    PLV+NTDGW+K MG DLL A + A  P H+VQ++  S AKSF++ L+  P+   +H +  W   P      P P+R S ++ R  RL AYFLG+          +P  VS   +   SE                                               + R+  +           ++ +     P RVPF  V +R+  GSV P        S +LH +N ++VGL      P+E     + GG          V + + P+ PCVG GIVRS+DVE+R  ++LTP P E+L+ VN+LV G + L   +L     + + PY      ++E  G  ++++RNNL R+
Sbjct:   53 ITSLEPHPVREILIPPTWSKVAASILDSMATSA----NRKMLVCGAKGVGKSTFSRYVVNRLLNVYPMVAYLDTDVGQPELAAPGVLSLHYITSPLLGTGYTHLEPAYRSYFFGFSSPKADPTVYMEAISAL---------------------LNDYAAKDS--TIPLVLNTDGWIKSMGYDLLQATLSAATPEHVVQVVALSKAKSFDVPLS--PQWT-LHPIEMWDIEP------PQPAR-SGKELRQFRLHAYFLGRVP--------VPSHVSLQNIHCTSE-----------------------------------------------QTRYTRL-----------LSTIYPQQAPYRVPFSKVGLRVSGGSVPPXXXXXXXLSQILHVLNASVVGLCC---HPYEIKPDATNGG---------PVTVLDNPMVPCVGHGIVRSIDVERREFHILTPVPFEILQHVNLLVRGHISLAFQLLDQSAVYGTTPYAVVDVLAAEGTGASLMESRNNLKRK 458          
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Match: A0A1V9Z9K0_9STRA (CLP1_P domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9K0_9STRA)

HSP 1 Score: 210 bits (534), Expect = 3.970e-53
Identity = 215/731 (29.41%), Postives = 305/731 (41.72%), Query Frame = 1
Query:   61 IVVGLDALEKLCFVGAALVRCGRGQADLSGFTLLPEAWGPYVEAHSPRWMGLLVLRALDAE-----ERPDVALARGSTATDDAGAANDDKMENEIEEAIDRIAE----HFPVVVVLKSLSGRSPLKFLSAQADADALYAPSIGADDSSDPVAESQPLQSNRRRGLQTAEGGELGGGQKDDTETAATGSPPPVASGCTGDVLDDNFAAELRLPGMQVVTTEAAGLRPLTIPQDWANAIDAVLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDCDLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLLYSAAVRALAERASEGVVGGAEQXXXEAERLASFFAGSSPPATPLVVNTDGWVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRVGAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGGVSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGEKVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMNGSVSPSLVLHAINGALVGL-VAMARQPWEGGRSGSFGGGAEPPPGEGLV--CLAETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPMVMLYDPNWCSH-PY-----FSSEVVGGGVIKNRNNLLRR 2199
            +V+G++A E L   G   +R  +G     GFT  P   G Y + +SPRW  L  L A  +        P   L R             D ++   E A D IA+     FPVV+VL+++                  Y       D   PV      +  R     +AE                  +PP   +     V+ D  A    L  +     E   +R L  P  W    + VLAS        +    LVCGAKGVGKST  +FL NR+L  HR VAY+D D+GQPE   PG +SLH +  P++GP   +L+ P  +Y+ G ++ K +P +Y  A+  L                     LA++ A    P  PLV+NTDGW+K MG DLL +++D   P+H+VQ++  + AKSF  D+A  P+   +H V  W   P      P P+R S ++ R  R  AYFL      R      P  +            AT  AV+ + R                                                L   ++++     P RVPF A+ +R+   +  PS +L+A+N ++VGL VA A            G  A  P  +  V   L + PL PCVG GIVRS+D  +   ++LTP P  +L  VNVLV G L L   +L       H PY      +SE  G  ++++RNNL R+
Sbjct:   21 VVMGMEADENLVGAGMVHIRVFQGHVVSCGFTFPP---GVYYDLYSPRWSNLATLVASTSPTASLYHAPCTDLTRQRWTIHHPS----DPLDVADEAAADAIAKDMAARFPVVIVLRAMR---------------LTYGNLASYFDGQTPVVRLPGFKFIRYASAPSAE------------------APPKKRAKVASAVVHDGEALFASLSSL-----EPNIVRELLFPASWHTMANTVLASFQTAV---AARKVLVCGAKGVGKSTCTQFLVNRLLSAHRVVAYIDTDVGQPELCAPGVLSLHYVTEPLLGPGFTHLQPPFRSYYFGFSSPKADPTMYMQAIGTL---------------------LAAYTA--KDPTIPLVINTDGWIKSMGHDLLHSILDCAAPQHVVQVVAMTKAKSF--DVAPSPQWT-LHPVEMWDAAP------PQPARSS-KELRQYRWHAYFL------RHVVIDNPADLQ----------LATCHAVSEQTR------------------------------------------------LGRVISMVYTRQLPYRVPFAALAVRVAGSAAPPSHILYALNASVVGLCVAPA------------GILAARPASDSAVPTVLLDNPLLPCVGHGIVRSIDKARGEFHILTPVPLALLSHVNVLVRGHLSLSFQLLDQNAVMGHSPYAVVDVLASEGTGASLMESRNNLKRK 594          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig141.2425.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE84_ECTSI0.000e+093.36CLP1_P domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A836CLB9_9STRA1.340e-6829.31CLP1_P domain-containing protein n=1 Tax=Tribonema... [more]
A0A6G0X2K6_9STRA4.270e-6529.50CLP1_P domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A5D6XJ55_9STRA1.670e-6130.11CLP1_P domain-containing protein n=1 Tax=Pythium b... [more]
A0A485KJZ3_9STRA9.980e-6128.45Aste57867_8325 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024TF99_9STRA2.120e-5928.63CLP1_P domain-containing protein n=1 Tax=Aphanomyc... [more]
W4FJX1_9STRA9.250e-5928.89CLP1_P domain-containing protein n=1 Tax=Aphanomyc... [more]
K3WRU7_GLOUD5.260e-5829.78CLP1_P domain-containing protein n=1 Tax=Globispor... [more]
A0A6A5AXT1_9STRA7.500e-5430.90CLP1_P domain-containing protein (Fragment) n=1 Ta... [more]
A0A1V9Z9K0_9STRA3.970e-5329.41CLP1_P domain-containing protein n=1 Tax=Achlya hy... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig141contigE-siliculosus-1a_F_contig141:35851..38067 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size2217
Model size2217
Exons1
Ec32 orthologEc-00_001280.1
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko03009,ko03019
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC2.7.1.78
EggNOG OGsCOG1341@1,KOG2750@2759
EggNOG free text desc.polynucleotide 5'-hydroxyl-kinase activity
GOsGO:0000166,GO:0000228,GO:0000394,GO:0000448,GO:0000460,GO:0000463,GO:0000466,GO:0000469,GO:0000470,GO:0000478,GO:0000479,GO:0000775,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005724,GO:0005730,GO:0005737,GO:0005829,GO:0005856,GO:0006139,GO:0006325,GO:0006342,GO:0006351,GO:0006353,GO:0006355,GO:0006360,GO:0006363,GO:0006364,GO:0006378,GO:0006379,GO:0006388,GO:0006396,GO:0006397,GO:0006399,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016301,GO:0016310,GO:0016458,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019205,GO:0019219,GO:0019222,GO:0019438,GO:0022613,GO:0030554,GO:0030702,GO:0030874,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031618,GO:0031933,GO:0031934,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035639,GO:0036094,GO:0040029,GO:0042254,GO:0042273,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043631,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044452,GO:0044454,GO:0044464,GO:0045111,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051731,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090730,GO:0097159,GO:0097356,GO:0097367,GO:0097659,GO:0098687,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1902555,GO:1902679,GO:1902911,GO:1903506,GO:1903507,GO:1905348,GO:1905354,GO:1990234,GO:2000112,GO:2000113,GO:2001141
KEGG Pathwayko03015,map03015
KEGG koko:K06947,ko:K14399
Preferred nameNOL9
Seed eggNOG ortholog2880.D8LE84
Seed ortholog evalue0.0
Seed ortholog score1341.6
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927924.7205703-CDS-E-siliculosus-1a_F_contig141:35850..380671622927924.7205703-CDS-E-siliculosus-1a_F_contig141:35850..38067Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 35851..38067 -
1696318739.333278-CDS-E-siliculosus-1a_F_contig141:35850..380671696318739.333278-CDS-E-siliculosus-1a_F_contig141:35850..38067Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 35851..38067 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig141.2425.1prot_E-siliculosus-1a_F_contig141.2425.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig141 35851..38067 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig141.2425.1

>prot_E-siliculosus-1a_F_contig141.2425.1 ID=prot_E-siliculosus-1a_F_contig141.2425.1|Name=mRNA_E-siliculosus-1a_F_contig141.2425.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=739bp
GKVHRVAGGVSAAADDAPGAIVVGLDALEKLCFVGAALVRCGRGQADLSG
FTLLPEAWGPYVEAHSPRWMGLLVLRALDAEERPDVALARGSTATDDAGA
ANDDKMENEIEEAIDRIAEHFPVVVVLKSLSGRSPLKFLSAQADADALYA
PSIGADDSSDPVAESQPLQSNRRRGLQTAEGGELGGGQKDDTETAATGSP
PPVASGCTGDVLDDNFAAELRLPGMQVVTTEAAGLRPLTIPQDWANAIDA
VLASPPRPAGGGSNDSALVCGAKGVGKSTLCRFLANRMLGRHREVAYMDC
DLGQPEFTPPGQVSLHLLNTPVVGPPHANLRHPHLAYFIGTTTSKPEPLL
YSAAVRALAERASEGVVGGAEQQQQEAERLASFFAGSSPPATPLVVNTDG
WVKGMGEDLLGAVIDAVRPRHIVQILGTSTAKSFELDLARLPEGCEVHRV
GAWSPPPVPSGGTPNPSRPSPQDQRTLRLVAYFLGQGQGARGCGDALPGG
VSPGCLSGESEAAATAAAVAGRQRGAGSAVSGAEDSSVAGGLAEGLVDGE
KVTGGDSGRLRHASMRGGKMYDLDHEVAVLLASARPRRVPFRAVQIRIMN
GSVSPSLVLHAINGALVGLVAMARQPWEGGRSGSFGGGAEPPPGEGLVCL
AETPLAPCVGLGIVRSVDVEKRVLYVLTPEPPEVLREVNVLVMGPLQLPM
VMLYDPNWCSHPYFSSEVVGGGVIKNRNNLLRRGGQHA*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig141:35851..38067-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig141.2425.1 ID=mRNA_E-siliculosus-1a_F_contig141.2425.1|Name=mRNA_E-siliculosus-1a_F_contig141.2425.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2217bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig141:35851..38067- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCAAGGTACACCGCGTGGCTGGCGGAGTGTCTGCAGCTGCCGACGACGC ACCCGGCGCGATAGTGGTGGGCCTGGACGCCCTCGAGAAGCTGTGCTTCG TCGGCGCAGCGCTTGTGCGGTGCGGCCGCGGCCAGGCCGACCTGTCGGGA TTCACCCTGCTGCCAGAGGCGTGGGGGCCTTACGTCGAGGCGCACTCGCC GCGCTGGATGGGCTTGCTGGTGCTGCGTGCATTGGACGCGGAAGAGCGCC CGGACGTAGCATTAGCCCGTGGCAGCACTGCTACAGATGACGCGGGTGCT GCCAACGACGACAAAATGGAGAACGAGATCGAGGAGGCGATCGATAGGAT CGCCGAACATTTCCCCGTGGTGGTGGTGCTCAAGTCGCTGTCCGGTCGCA GCCCGTTGAAGTTTTTGTCGGCGCAGGCCGACGCCGATGCTCTTTACGCG CCGAGTATTGGCGCCGACGACAGCTCTGACCCTGTCGCCGAAAGTCAACC ACTTCAAAGTAACCGTCGCCGGGGTTTGCAAACGGCGGAGGGGGGCGAGT TGGGGGGGGGGCAGAAAGATGACACGGAAACGGCGGCCACCGGCAGCCCA CCTCCCGTGGCGTCAGGGTGCACCGGCGACGTCCTCGATGACAACTTCGC GGCCGAGCTGCGTCTCCCGGGAATGCAGGTGGTAACGACCGAAGCAGCCG GGCTGCGCCCGCTCACCATACCTCAAGACTGGGCGAACGCCATCGACGCC GTGCTTGCGTCGCCACCCCGTCCAGCCGGCGGCGGCAGCAACGACTCGGC GCTTGTCTGCGGGGCTAAGGGCGTAGGGAAGAGCACCCTGTGTCGCTTCC TCGCGAACAGAATGCTCGGCCGGCACCGGGAAGTTGCCTACATGGACTGC GACCTGGGACAGCCTGAATTCACGCCTCCGGGACAAGTATCCCTCCACCT GCTCAACACCCCGGTGGTGGGCCCGCCGCACGCCAACCTCCGGCATCCGC ACCTGGCGTACTTCATTGGCACGACCACCTCCAAACCGGAGCCGCTACTC TACTCGGCGGCGGTGCGCGCCCTTGCCGAGCGCGCCAGCGAAGGGGTTGT GGGCGGAGCCGAGCAGCAGCAGCAGGAGGCGGAGCGGCTGGCGTCCTTTT TCGCGGGCAGCTCCCCCCCGGCCACCCCCCTCGTTGTCAACACGGACGGC TGGGTGAAGGGCATGGGGGAAGACCTCCTCGGCGCGGTGATCGACGCGGT TCGCCCCCGACACATCGTCCAGATCCTGGGCACGTCTACCGCCAAGTCGT TCGAGCTCGACCTCGCCCGCCTGCCGGAGGGTTGCGAGGTCCACCGCGTC GGGGCCTGGTCGCCGCCCCCGGTCCCCTCGGGAGGAACGCCGAACCCGTC TCGTCCCTCGCCTCAAGACCAGCGAACCCTCCGCCTGGTCGCGTACTTTC TAGGCCAGGGGCAGGGGGCCCGCGGTTGCGGCGATGCTTTGCCAGGCGGG GTGTCGCCGGGTTGTCTTTCGGGAGAGTCAGAGGCGGCCGCCACGGCGGC AGCCGTTGCGGGAAGGCAACGGGGAGCGGGTTCTGCTGTTTCCGGAGCCG AGGATAGTTCTGTCGCTGGTGGGCTCGCAGAAGGCTTAGTTGACGGGGAA AAAGTTACGGGCGGCGACAGCGGACGGTTGAGACACGCGAGCATGCGGGG AGGGAAGATGTACGACTTGGACCACGAGGTGGCGGTTCTGCTGGCGTCCG CGAGGCCTCGGCGGGTGCCGTTTCGGGCGGTCCAGATCAGGATCATGAAC GGCTCAGTTTCGCCGAGCCTCGTTCTGCACGCCATCAACGGCGCGCTTGT CGGACTTGTGGCAATGGCTAGGCAGCCTTGGGAAGGGGGGAGAAGCGGCA GTTTTGGTGGCGGTGCCGAGCCGCCGCCGGGAGAGGGCTTGGTGTGCTTA GCCGAGACACCGTTGGCACCGTGCGTAGGTCTTGGAATCGTGCGGTCTGT CGACGTCGAGAAGCGAGTGCTGTACGTGTTGACGCCCGAGCCACCGGAGG TGTTGAGAGAGGTAAACGTGTTGGTGATGGGGCCGTTGCAGCTGCCGATG GTGATGCTCTACGACCCGAACTGGTGCTCGCACCCGTACTTCTCCTCGGA GGTAGTTGGTGGGGGGGTCATCAAGAACCGGAACAATTTGTTGCGAAGAG GGGGGCAGCACGCGTAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig141:35851..38067-

>mRNA_E-siliculosus-1a_F_contig141.2425.1 ID=mRNA_E-siliculosus-1a_F_contig141.2425.1|Name=mRNA_E-siliculosus-1a_F_contig141.2425.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4434bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig141:35851..38067- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCAAGGTACACCGCGTGGCTGGCGGAGTGTCTGCAGCTGCCGACGACGC
ACCCGGCGCGATAGTGGTGGGCCTGGACGCCCTCGAGAAGCTGTGCTTCG
TCGGCGCAGCGCTTGTGCGGTGCGGCCGCGGCCAGGCCGACCTGTCGGGA
TTCACCCTGCTGCCAGAGGCGTGGGGGCCTTACGTCGAGGCGCACTCGCC
GCGCTGGATGGGCTTGCTGGTGCTGCGTGCATTGGACGCGGAAGAGCGCC
CGGACGTAGCATTAGCCCGTGGCAGCACTGCTACAGATGACGCGGGTGCT
GCCAACGACGACAAAATGGAGAACGAGATCGAGGAGGCGATCGATAGGAT
CGCCGAACATTTCCCCGTGGTGGTGGTGCTCAAGTCGCTGTCCGGTCGCA
GCCCGTTGAAGTTTTTGTCGGCGCAGGCCGACGCCGATGCTCTTTACGCG
CCGAGTATTGGCGCCGACGACAGCTCTGACCCTGTCGCCGAAAGTCAACC
ACTTCAAAGTAACCGTCGCCGGGGTTTGCAAACGGCGGAGGGGGGCGAGT
TGGGGGGGGGGCAGAAAGATGACACGGAAACGGCGGCCACCGGCAGCCCA
CCTCCCGTGGCGTCAGGGTGCACCGGCGACGTCCTCGATGACAACTTCGC
GGCCGAGCTGCGTCTCCCGGGAATGCAGGTGGTAACGACCGAAGCAGCCG
GGCTGCGCCCGCTCACCATACCTCAAGACTGGGCGAACGCCATCGACGCC
GTGCTTGCGTCGCCACCCCGTCCAGCCGGCGGCGGCAGCAACGACTCGGC
GCTTGTCTGCGGGGCTAAGGGCGTAGGGAAGAGCACCCTGTGTCGCTTCC
TCGCGAACAGAATGCTCGGCCGGCACCGGGAAGTTGCCTACATGGACTGC
GACCTGGGACAGCCTGAATTCACGCCTCCGGGACAAGTATCCCTCCACCT
GCTCAACACCCCGGTGGTGGGCCCGCCGCACGCCAACCTCCGGCATCCGC
ACCTGGCGTACTTCATTGGCACGACCACCTCCAAACCGGAGCCGCTACTC
TACTCGGCGGCGGTGCGCGCCCTTGCCGAGCGCGCCAGCGAAGGGGTTGT
GGGCGGAGCCGAGCAGCAGCAGCAGGAGGCGGAGCGGCTGGCGTCCTTTT
TCGCGGGCAGCTCCCCCCCGGCCACCCCCCTCGTTGTCAACACGGACGGC
TGGGTGAAGGGCATGGGGGAAGACCTCCTCGGCGCGGTGATCGACGCGGT
TCGCCCCCGACACATCGTCCAGATCCTGGGCACGTCTACCGCCAAGTCGT
TCGAGCTCGACCTCGCCCGCCTGCCGGAGGGTTGCGAGGTCCACCGCGTC
GGGGCCTGGTCGCCGCCCCCGGTCCCCTCGGGAGGAACGCCGAACCCGTC
TCGTCCCTCGCCTCAAGACCAGCGAACCCTCCGCCTGGTCGCGTACTTTC
TAGGCCAGGGGCAGGGGGCCCGCGGTTGCGGCGATGCTTTGCCAGGCGGG
GTGTCGCCGGGTTGTCTTTCGGGAGAGTCAGAGGCGGCCGCCACGGCGGC
AGCCGTTGCGGGAAGGCAACGGGGAGCGGGTTCTGCTGTTTCCGGAGCCG
AGGATAGTTCTGTCGCTGGTGGGCTCGCAGAAGGCTTAGTTGACGGGGAA
AAAGTTACGGGCGGCGACAGCGGACGGTTGAGACACGCGAGCATGCGGGG
AGGGAAGATGTACGACTTGGACCACGAGGTGGCGGTTCTGCTGGCGTCCG
CGAGGCCTCGGCGGGTGCCGTTTCGGGCGGTCCAGATCAGGATCATGAAC
GGCTCAGTTTCGCCGAGCCTCGTTCTGCACGCCATCAACGGCGCGCTTGT
CGGACTTGTGGCAATGGCTAGGCAGCCTTGGGAAGGGGGGAGAAGCGGCA
GTTTTGGTGGCGGTGCCGAGCCGCCGCCGGGAGAGGGCTTGGTGTGCTTA
GCCGAGACACCGTTGGCACCGTGCGTAGGTCTTGGAATCGTGCGGTCTGT
CGACGTCGAGAAGCGAGTGCTGTACGTGTTGACGCCCGAGCCACCGGAGG
TGTTGAGAGAGGTAAACGTGTTGGTGATGGGGCCGTTGCAGCTGCCGATG
GTGATGCTCTACGACCCGAACTGGTGCTCGCACCCGTACTTCTCCTCGGA
GGTAGTTGGTGGGGGGGTCATCAAGAACCGGAACAATTTGTTGCGAAGAG
GGGGGCAGCACGCGTAGGGCAAGGTACACCGCGTGGCTGGCGGAGTGTCT
GCAGCTGCCGACGACGCACCCGGCGCGATAGTGGTGGGCCTGGACGCCCT
CGAGAAGCTGTGCTTCGTCGGCGCAGCGCTTGTGCGGTGCGGCCGCGGCC
AGGCCGACCTGTCGGGATTCACCCTGCTGCCAGAGGCGTGGGGGCCTTAC
GTCGAGGCGCACTCGCCGCGCTGGATGGGCTTGCTGGTGCTGCGTGCATT
GGACGCGGAAGAGCGCCCGGACGTAGCATTAGCCCGTGGCAGCACTGCTA
CAGATGACGCGGGTGCTGCCAACGACGACAAAATGGAGAACGAGATCGAG
GAGGCGATCGATAGGATCGCCGAACATTTCCCCGTGGTGGTGGTGCTCAA
GTCGCTGTCCGGTCGCAGCCCGTTGAAGTTTTTGTCGGCGCAGGCCGACG
CCGATGCTCTTTACGCGCCGAGTATTGGCGCCGACGACAGCTCTGACCCT
GTCGCCGAAAGTCAACCACTTCAAAGTAACCGTCGCCGGGGTTTGCAAAC
GGCGGAGGGGGGCGAGTTGGGGGGGGGGCAGAAAGATGACACGGAAACGG
CGGCCACCGGCAGCCCACCTCCCGTGGCGTCAGGGTGCACCGGCGACGTC
CTCGATGACAACTTCGCGGCCGAGCTGCGTCTCCCGGGAATGCAGGTGGT
AACGACCGAAGCAGCCGGGCTGCGCCCGCTCACCATACCTCAAGACTGGG
CGAACGCCATCGACGCCGTGCTTGCGTCGCCACCCCGTCCAGCCGGCGGC
GGCAGCAACGACTCGGCGCTTGTCTGCGGGGCTAAGGGCGTAGGGAAGAG
CACCCTGTGTCGCTTCCTCGCGAACAGAATGCTCGGCCGGCACCGGGAAG
TTGCCTACATGGACTGCGACCTGGGACAGCCTGAATTCACGCCTCCGGGA
CAAGTATCCCTCCACCTGCTCAACACCCCGGTGGTGGGCCCGCCGCACGC
CAACCTCCGGCATCCGCACCTGGCGTACTTCATTGGCACGACCACCTCCA
AACCGGAGCCGCTACTCTACTCGGCGGCGGTGCGCGCCCTTGCCGAGCGC
GCCAGCGAAGGGGTTGTGGGCGGAGCCGAGCAGCAGCAGCAGGAGGCGGA
GCGGCTGGCGTCCTTTTTCGCGGGCAGCTCCCCCCCGGCCACCCCCCTCG
TTGTCAACACGGACGGCTGGGTGAAGGGCATGGGGGAAGACCTCCTCGGC
GCGGTGATCGACGCGGTTCGCCCCCGACACATCGTCCAGATCCTGGGCAC
GTCTACCGCCAAGTCGTTCGAGCTCGACCTCGCCCGCCTGCCGGAGGGTT
GCGAGGTCCACCGCGTCGGGGCCTGGTCGCCGCCCCCGGTCCCCTCGGGA
GGAACGCCGAACCCGTCTCGTCCCTCGCCTCAAGACCAGCGAACCCTCCG
CCTGGTCGCGTACTTTCTAGGCCAGGGGCAGGGGGCCCGCGGTTGCGGCG
ATGCTTTGCCAGGCGGGGTGTCGCCGGGTTGTCTTTCGGGAGAGTCAGAG
GCGGCCGCCACGGCGGCAGCCGTTGCGGGAAGGCAACGGGGAGCGGGTTC
TGCTGTTTCCGGAGCCGAGGATAGTTCTGTCGCTGGTGGGCTCGCAGAAG
GCTTAGTTGACGGGGAAAAAGTTACGGGCGGCGACAGCGGACGGTTGAGA
CACGCGAGCATGCGGGGAGGGAAGATGTACGACTTGGACCACGAGGTGGC
GGTTCTGCTGGCGTCCGCGAGGCCTCGGCGGGTGCCGTTTCGGGCGGTCC
AGATCAGGATCATGAACGGCTCAGTTTCGCCGAGCCTCGTTCTGCACGCC
ATCAACGGCGCGCTTGTCGGACTTGTGGCAATGGCTAGGCAGCCTTGGGA
AGGGGGGAGAAGCGGCAGTTTTGGTGGCGGTGCCGAGCCGCCGCCGGGAG
AGGGCTTGGTGTGCTTAGCCGAGACACCGTTGGCACCGTGCGTAGGTCTT
GGAATCGTGCGGTCTGTCGACGTCGAGAAGCGAGTGCTGTACGTGTTGAC
GCCCGAGCCACCGGAGGTGTTGAGAGAGGTAAACGTGTTGGTGATGGGGC
CGTTGCAGCTGCCGATGGTGATGCTCTACGACCCGAACTGGTGCTCGCAC
CCGTACTTCTCCTCGGAGGTAGTTGGTGGGGGGGTCATCAAGAACCGGAA
CAATTTGTTGCGAAGAGGGGGGCAGCACGCGTAG
back to top