mRNA_E-siliculosus-1a_F_contig141.2421.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig141.2421.1
Unique NamemRNA_E-siliculosus-1a_F_contig141.2421.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: D8LE88_ECTSI (Flavoprotein Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE88_ECTSI)

HSP 1 Score: 427 bits (1097), Expect = 8.280e-148
Identity = 206/212 (97.17%), Postives = 210/212 (99.06%), Query Frame = 1 
Query:  436 MTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPATPRGEFRMSYATKQAIYYGEVEEGVTMWSFTCWRDGEIERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTL 1071
            MTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLE LDT EGEGITELRFRGQSEVVRARAV+GADGRRS+VRKKVLAAEERNCDWALTWWALADIPEPATP+GEFRMSY+TKQAIYYGEVEEGVTMWSFTCWRDGEIERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTL
Sbjct:    1 MTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLERLDTDEGEGITELRFRGQSEVVRARAVIGADGRRSIVRKKVLAAEERNCDWALTWWALADIPEPATPKGEFRMSYSTKQAIYYGEVEEGVTMWSFTCWRDGEIERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTL 212
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: A0A6H5JVL1_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVL1_9PHAE)

HSP 1 Score: 411 bits (1057), Expect = 1.610e-142
Identity = 201/209 (96.17%), Postives = 207/209 (99.04%), Query Frame = 1 
Query:  310 SFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPATPRGEFRMSYATKQAIYYGEVEEGVTMWSFTCWRDGEIERDPELRAGRALKELEGWPEEVRN 936
            SFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAV+GADGRRS+VRKKVLAAEERNCDWALTWWALADIPEP TP+GEFRMSY+TKQAIYYGEVEEGVTMWSFTCWRDGE+ERDPELRAGRALKELEGWPEEV +
Sbjct:    2 SFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVIGADGRRSIVRKKVLAAEERNCDWALTWWALADIPEPTTPKGEFRMSYSTKQAIYYGEVEEGVTMWSFTCWRDGEVERDPELRAGRALKELEGWPEEVNS 210
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: A0A3B8Y6P0_9CYAN (FAD-binding monooxygenase n=1 Tax=Cyanothece sp. UBA12306 TaxID=2055757 RepID=A0A3B8Y6P0_9CYAN)

HSP 1 Score: 116 bits (291), Expect = 8.820e-26
Identity = 88/301 (29.24%), Postives = 153/301 (50.83%), Query Frame = 1 
Query:  172 LDLAIVGGGPAGLAAAVGLKEKGLNVKVFEAAPEFSERGAAVFLQQSFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPATPRGEFRMSYATKQAIYYGEVEEGVTMWSFTCWR-DGEIERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTL 1071
            +++AI+G G  GLA A+ L+++G  V+V+E A +F   G  + L  + GL  L+ I+P L  +    G  ++ + +   +GETI     T + +  G   I I    LQ++L   L ++ + L  +   LD  + E    + F+G  +  RA  ++GADG  S VRK +   E+ N   +++W A     +      E     + KQ ++   + +G   W+   +  +  +  + +    R L++L  W E +RN+++NTP +KI  V + D P    +WS Q  V+L+GDAAH M P++
Sbjct:   13 INIAIIGAGLGGLACAIALRKQGFEVQVYEQAKDFRPVGGGLGLFPN-GLNFLELIEPDLVEQIKNYGCCLQKIVVKNIAGETINSNPTTQLIEKYGRTIITIWWWHLQQILAKKLPENCIHLDCQC--LDFEQTEQDVIIHFKG-GKTARADLLIGADGIHSAVRKTLFGDEQINYLKSMSWRANLKCQQELIKPDEIVRIISDKQFLFLVNIGDGYINWTTRKFAPEYHLSTNSQAMKDRILQDLTNWAEPIRNIIKNTPADKIFAVPICDRP-PLNSWS-QGRVTLLGDAAHPMSPSM 307
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: A0A2S6N7C4_RHOGL (FAD_binding_3 domain-containing protein n=2 Tax=Rhodopila globiformis TaxID=1071 RepID=A0A2S6N7C4_RHOGL)

HSP 1 Score: 115 bits (289), Expect = 1.400e-25
Identity = 99/305 (32.46%), Postives = 156/305 (51.15%), Query Frame = 1 
Query:  172 LDLAIVGGGPAGLAAAVGLKEKGLNVKVFEAAPEFSERGAAVFLQQSFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLD-THEGEGITELRFRGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPATPRGEFRMSYATKQAIYYG--EVEEGVTMWSFTC-WRDGEIERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGD-SPLQWTTWSKQPGVSLMGDAAHSMLPTL 1071
            + +AI+G G  GLA+A+ L+++G++V+VFE A E    GA + L  + GL  L+ I P + A  +  G +   L+L R +G+ I ++ +T + +  G P + I    LQKVL G L+ D V L  RL G + T++G     L F G+  V  A  ++GADG  S VR+ ++          L W ++     P+    E    +A      +   +V  G+  WS T  W    I  D      R  +   GW   V++V+  TPP  I+E  + D +PL   +W +   V+L+GDAAH+M+P+L
Sbjct:    6 MKVAIIGAGLGGLASAIALRKRGVDVQVFERARELRPIGAGLTLAPN-GLKALNAIDPDIVARLLELGSQNSRLYLRRANGDLITEIPITFMDRY-GQPMLNIVWSCLQKVLTGFLKADAVRLDHRLVGFERTNDG---LSLHFDGRDPVT-ADVLVGADGINSTVRQIMVGDGPPRYAGRLCWRSVVSYQHPSLLPDEVTF-FAGVDGRNFSMFDVGSGLVFWSATALWPAWPIS-DGIAPRQRVTEAFAGWAPLVQDVLAATPPEDIVERPIEDRAPL--ASW-RSHRVTLLGDAAHAMVPSL 299
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: A0A0P4UQ09_9CYAN (2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase n=1 Tax=Leptolyngbya sp. NIES-2104 TaxID=1552121 RepID=A0A0P4UQ09_9CYAN)

HSP 1 Score: 115 bits (287), Expect = 2.620e-25
Identity = 94/303 (31.02%), Postives = 149/303 (49.17%), Query Frame = 1 
Query:  172 LDLAIVGGGPAGLAAAVGLKEKGLNVKVFEAAPEFSERGAAVFLQQSFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPATPRGEFRMSYATKQAIYYGEVEEGVTMWSFTCWR--DGEIERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGD-SPLQWTTWSKQPGVSLMGDAAHSMLPTL 1071
            +++ IVG G  GLA A  L ++  NV+V+E A      GA + L  + GL  L+ +QPG+    + AG   + L + + +GETIA   +T + +  G P + I    LQ +L   L  D + L  R  G          E+ F    E V+A  ++GADG  S+VR+ ++          ++W A+        P     +  A  + I   +V +G T WS    +  D   +R  +++A R L+   GW E V  +++ TP   I+E  + D SP++   WSK   V+LMGDAAH ++P+L
Sbjct:    1 MNIVIVGAGIGGLATANALLKQRFNVQVYEQAQALRAIGAGLTLTPN-GLNSLNAVQPGIVESLIKAGSLAQMLMIRQSTGETIASKPVTTLQQY-GQPLLNIQWSKLQAILANALPPDIIHLQHRCVGFQQQNNS--IEVFF-ADGETVQADLLIGADGVNSVVRQGLIGDGAPTYAGRMSWRAVIQYAHEQLPPDTGTIMTADGKIIVLTDVGQGYTFWSAGVLQEDDSVCDRASDVKA-RVLELFAGWGEPVEAIIKATPDESIVERPICDRSPVE--RWSKGR-VTLMGDAAHPVVPSL 294
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: A0A6H5JXQ7_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ7_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 6.260e-25
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1 
Query:  922 EEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTL 1071
            EEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTL
Sbjct:   27 EEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTL 76
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: A0A6B3PLS9_9CYAN (NAD(P)-binding protein n=2 Tax=Okeania TaxID=1458928 RepID=A0A6B3PLS9_9CYAN)

HSP 1 Score: 113 bits (282), Expect = 1.640e-24
Identity = 85/300 (28.33%), Postives = 148/300 (49.33%), Query Frame = 1 
Query:  178 LAIVGGGPAGLAAAVGLKEKGLNVKVFEAAPEFSERGAAVFLQQSFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPATPRGEFRMSYATKQAIYYGEVEEGVTMWSFT-CWRDGEIERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGDS-PLQWTTWSKQPGVSLMGDAAHSMLPTL 1071
            +AI+GGGP GLA A+ L+++G++  V+E A EF   GA + L  + GL  LD I+P + +    +  +V+ + L   +GETI +   +PI +  G P + I    LQ++L   L  + + L  R  G + ++   IT        + V +  ++G DG  S +R+ ++   +     +++W A+ +  E   P  E  +    K  ++   + EG   W       D  +         R L+E   W E VR ++  T P +I+E  + D  PL+  ++ +   V+L+GDAAH M P++
Sbjct:   12 VAIIGGGPGGLATAIALRKQGIDAHVYEQAREFRPVGADISLLPN-GLKCLDAIKPDIVSTLKCSSCQVQRVTLKTSTGETI-RTFPSPIMRKYGQPALTIWWWHLQQILASALPAEVIHLNHRCIGFEQNQNRVITHFE---NGKTVESDLLIGVDGVNSRIREILIGDGQPRYLGSMSWRAVVNYQEELLPPNEVIVMNGEKTILFLLNLGEGDMYWGARKLLPDSTLSSTFAEAKSRVLREFANWMEPVRELMAQTDPERILEGRICDRLPLKQWSYGR---VTLLGDAAHPMAPSV 303
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BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: UPI00123C1DA1 (FAD-dependent monooxygenase n=1 Tax=Nocardiopsis quinghaiensis TaxID=464995 RepID=UPI00123C1DA1)

HSP 1 Score: 110 bits (275), Expect = 1.460e-23
Identity = 87/296 (29.39%), Postives = 131/296 (44.26%), Query Frame = 1 
Query:  184 IVGGGPAGLAAAVGLKEKGLNVKVFEAAPEFSERGAAVFLQQSFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPATPRGEFRMSYATKQAIYYGEVEEGVTMWSFTCWRDGEIERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTL 1071
            +VG G  GL AA+ L+  G++V+V+E APE    G  + +  +  +A LD +  G+       GR ++T H+    G  I +     I   +G P + ISR  L + L        +ELG   E  +T        L   G  E   A  ++GADG  S+VR ++   E  +    + W  + D   P    G     +   Q     ++  G   W  T     E   + +      L+ L GWP+EVR+ VR TPP+ I+ +   D       W   P V+L+GDAAH ML +L
Sbjct:    9 VVGAGIGGLTAAIALRRVGVDVRVYERAPEIRAAGFGLSVMSN-AVAALDAL--GIDLRLAKRGRTLDTYHVRDTRGRLIREFPFPEIIARLGVPSVCISRADLLRALTEEAAGIPIELGRSAERFETEGDRVRLHLADGGADE---ADLLVGADGFHSVVRAQIAGPEPAHDSGYICWLGITDYEHPRFAPGSVVHYWGDGQRFGLVDIGHGRLYWWATKNMPAERSANWDGDKAEVLRALSGWPDEVRHAVRVTPPSDILGIPSRDRTFL-ERWGHGP-VTLLGDAAHPMLTSL 296
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: A0A5M6ILW1_9PROT (NAD(P)-binding protein n=1 Tax=Rhodovastum atsumiense TaxID=504468 RepID=A0A5M6ILW1_9PROT)

HSP 1 Score: 108 bits (270), Expect = 6.000e-23
Identity = 93/301 (30.90%), Postives = 142/301 (47.18%), Query Frame = 1 
Query:  184 IVGGGPAGLAAAVGLKEKGLNVKVFEAAPEFSERGAAVFLQQSFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPIT--KLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPAT-PRGEFRMSYATKQAIYYGEVEEGVTMWSFTCWRDGEIERDPELRAGRALKEL-EGWPEEVRNVVRNTPPNKIIEVYVGD-SPLQWTTWSKQPGVSLMGDAAHSMLPTL 1071
            I GGG  GLAAA+ L+ +G++ +V+E A +    GA + +  + GL  L  I P +       G E    HL R  GE +A    TP T  +  G P + +    LQ+ L G L  D + LG RL G        +T  RF   +  VRA  ++GADG  S VR+ ++          L+W  +  +  P+  PR    ++    +     ++ +G+T WS           D    A + + +L  GW   V +++  TP   I+E  + D +PL  T WS    V+L+GDAAH+M+P L
Sbjct:    7 IAGGGLGGLAAAIALRRQGIDAEVYEKARDLRPIGAGLSVAPN-GLKALRAIDPAIVDALRPRGSEAACFHLRRAGGELVAT---TPTTHEERYGAPVLNLLWSRLQETLAGFLPGDAIHLGHRLAGFTQQADHVVT--RFENGA-TVRADLLVGADGIHSAVRRSLVDEGPPRYAGRLSWRGVVGLAHPSLRPRDVTMIAGTDGKTFAIFDIGDGLTFWSAGALSPEPTPSDSAAAAKQRVIDLFAGWAPPVGDLLAATPAGDIVERPIEDRTPL--TRWS-HGRVTLLGDAAHAMVPAL 297
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Match: UPI001CCD27DB (FAD-dependent monooxygenase n=1 Tax=Kovacikia minuta TaxID=2931930 RepID=UPI001CCD27DB)

HSP 1 Score: 108 bits (269), Expect = 8.040e-23
Identity = 87/302 (28.81%), Postives = 148/302 (49.01%), Query Frame = 1 
Query:  172 LDLAIVGGGPAGLAAAVGLKEKGLNVKVFEAAPEFSERGAAVFLQQSFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPITKLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRFRGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPATPRGEFRMSYATKQAIY-YGEVEEGVTMWSFTCWRDGE-IERDPELRAGRALKELEGWPEEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAAHSMLPTL 1071
            + + ++G G  GLAAA+ L+++G++ +V+E A      GA + L  + GL  L+ I PGLA   +  G + + ++L + +G+ IA+ +  P+ +  G P + I    LQ+ L   L  D + L  R  G D  +  G+ E++F    E  +A  ++GADG  S+VR+ ++          L+W A+        P  E  +  +    I+   +V +G   WS     + E + +         L+   GW E V  +V  T    I+E  + D P    +W+K   V+L+GDAAH M+P+L
Sbjct:    1 MKVTVIGAGLGGLAAAIALRQQGIDTQVYEKARGLQPIGAGLSLFPN-GLNVLNAILPGLADSLIRVGSQAQRVNLRKSNGDLIAQ-NQLPLQEQYGQPMLNIRWSQLQETLASVLPPDLIHLNYRCVGFDQTDS-GV-EVQFEN-GETAQADVLIGADGIHSIVRQLLVGDGSPRYAGRLSWRAVLQYQHQLLPADEVTIMTSIDGKIFTLIDVGDGQIFWSAGALSERENLHKQATEVKSHVLETFAGWAEPVEAIVTATAAEAIVERPIWDRP-PLESWNKGR-VTLLGDAAHPMVPSL 295
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig141.2421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE88_ECTSI8.280e-14897.17Flavoprotein Monooxygenase n=1 Tax=Ectocarpus sili... [more]
A0A6H5JVL1_9PHAE1.610e-14296.17FAD_binding_3 domain-containing protein n=1 Tax=Ec... [more]
A0A3B8Y6P0_9CYAN8.820e-2629.24FAD-binding monooxygenase n=1 Tax=Cyanothece sp. U... [more]
A0A2S6N7C4_RHOGL1.400e-2532.46FAD_binding_3 domain-containing protein n=2 Tax=Rh... [more]
A0A0P4UQ09_9CYAN2.620e-2531.022-polyprenyl-6-methoxyphenol hydroxylase and relat... [more]
A0A6H5JXQ7_9PHAE6.260e-25100.00FAD_binding_3 domain-containing protein n=1 Tax=Ec... [more]
A0A6B3PLS9_9CYAN1.640e-2428.33NAD(P)-binding protein n=2 Tax=Okeania TaxID=14589... [more]
UPI00123C1DA11.460e-2329.39FAD-dependent monooxygenase n=1 Tax=Nocardiopsis q... [more]
A0A5M6ILW1_9PROT6.000e-2330.90NAD(P)-binding protein n=1 Tax=Rhodovastum atsumie... [more]
UPI001CCD27DB8.040e-2328.81FAD-dependent monooxygenase n=1 Tax=Kovacikia minu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig141contigE-siliculosus-1a_F_contig141:519..5255 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size1071
Model size1071
Exons5
Ec32 orthologEc-00_001320.1
Ec32 ortholog descriptionFlavoprotein Monooxygenase
Hectar predicted targeting categorychloroplast
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.CH
EC1.14.13.1
EggNOG OGsCOG0654@1,KOG2614@2759
EggNOG free text desc.FAD binding
GOsGO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0019748,GO:0044550,GO:0055114,GO:0071704,GO:1900558,GO:1900560,GO:1900561,GO:1900563,GO:1901576
KEGG ModuleM00661
KEGG Pathwayko00403,ko00621,ko00624,ko00626,ko01100,ko01110,ko01120,ko01220,map00403,map00621,map00624,map00626,map01100,map01110,map01120,map01220
KEGG ReactionR00818,R05632,R06915,R06936,R06939,R10350,R10351
KEGG koko:K00480,ko:K18386
KEGG rclassRC00201,RC00389,RC03133
Seed eggNOG ortholog2880.D8LE88
Seed ortholog evalue2e-117
Seed ortholog score429.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig141.2421.1prot_E-siliculosus-1a_F_contig141.2421.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig141 519..5255 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927923.9926705-CDS-E-siliculosus-1a_F_contig141:518..6621622927923.9926705-CDS-E-siliculosus-1a_F_contig141:518..662Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 519..662 -
1696318738.8799524-CDS-E-siliculosus-1a_F_contig141:518..6621696318738.8799524-CDS-E-siliculosus-1a_F_contig141:518..662Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 519..662 -
1622927924.005485-CDS-E-siliculosus-1a_F_contig141:2206..23231622927924.005485-CDS-E-siliculosus-1a_F_contig141:2206..2323Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 2207..2323 -
1696318738.9032292-CDS-E-siliculosus-1a_F_contig141:2206..23231696318738.9032292-CDS-E-siliculosus-1a_F_contig141:2206..2323Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 2207..2323 -
1622927924.0165467-CDS-E-siliculosus-1a_F_contig141:3005..31591622927924.0165467-CDS-E-siliculosus-1a_F_contig141:3005..3159Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 3006..3159 -
1696318738.9180956-CDS-E-siliculosus-1a_F_contig141:3005..31591696318738.9180956-CDS-E-siliculosus-1a_F_contig141:3005..3159Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 3006..3159 -
1622927924.0268698-CDS-E-siliculosus-1a_F_contig141:3800..41501622927924.0268698-CDS-E-siliculosus-1a_F_contig141:3800..4150Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 3801..4150 -
1696318738.9337878-CDS-E-siliculosus-1a_F_contig141:3800..41501696318738.9337878-CDS-E-siliculosus-1a_F_contig141:3800..4150Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 3801..4150 -
1622927924.036455-CDS-E-siliculosus-1a_F_contig141:4949..52551622927924.036455-CDS-E-siliculosus-1a_F_contig141:4949..5255Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 4950..5255 -
1696318738.9455323-CDS-E-siliculosus-1a_F_contig141:4949..52551696318738.9455323-CDS-E-siliculosus-1a_F_contig141:4949..5255Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig141 4950..5255 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig141.2421.1

>prot_E-siliculosus-1a_F_contig141.2421.1 ID=prot_E-siliculosus-1a_F_contig141.2421.1|Name=mRNA_E-siliculosus-1a_F_contig141.2421.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=357bp
MAPALRIWLLASLVVLSVGDTEGFVAQPAFVRKCPSTGLASSATASASAT
AASGQKVLDLAIVGGGPAGLAAAVGLKEKGLNVKVFEAAPEFSERGAAVF
LQQSFGLAELDKIQPGLAAEAVAAGREVETLHLTRPSGETIAKVDMTPIT
KLVGYPFIGISRHALQKVLLGHLEDDDVELGARLEGLDTHEGEGITELRF
RGQSEVVRARAVLGADGRRSMVRKKVLAAEERNCDWALTWWALADIPEPA
TPRGEFRMSYATKQAIYYGEVEEGVTMWSFTCWRDGEIERDPELRAGRAL
KELEGWPEEVRNVVRNTPPNKIIEVYVGDSPLQWTTWSKQPGVSLMGDAA
HSMLPTL
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mRNA from alignment at E-siliculosus-1a_F_contig141:519..5255-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig141.2421.1 ID=mRNA_E-siliculosus-1a_F_contig141.2421.1|Name=mRNA_E-siliculosus-1a_F_contig141.2421.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4737bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig141:519..5255- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGCCCGCCTTGCGCATATGGCTACTGGCCTCTCTAGTGGTGCTTTC
GGTGGGCGATACCGAGGGATTTGTGGCTCAGCCTGCTTTTGTCAGAAAGT
GTCCTTCAACAGGCCTCGCCTCGTCAGCGACAGCTTCTGCAAGTGCCACG
GCAGCTTCCGGGCAGAAAGTCCTCGACTTGGCCATTGTGGGTGGTGGCCC
TGCTGGACTTGCCGCAGCCGTCGGGTTAAAAGAAAAGGGGTTGAATGTGA
AGGTGTTCGAAGCCGCCCCAGAGTTCTCTGAGAGAGGGGCAGCCGTCTTC
CTCCAGGTGATGATTTAATCTACGGCGTAAGTTGTAGGTGACACTAATTG
TAGATAACACACCCCCTGGACCGATTTTCAAAGCTCGATTACTCCAAGGA
CGAAGAGGATGCATAAACGAAACGATACGTTTTCGGAGAGGTCTCGACCA
GACGGAACGCCGCCTTTTTCGGCCCTGTGACTCTTTCGGCTGTTGATAAA
ATTGCTTTGAAAATCGATCCAAGAGGTGTTGTGGTATGTTGTGTCGTACG
TATGGACATGTAGGCCAGGCACCGAAAAAAATGAGTTTGCCCGCAGTTTC
GTAGAACTACTTGTAATTCAACAGTTCCCCGACCTACGGTGTGCTGTGCG
GTCGATATGCATTCAAAGCAGCCCCCCCACAGCCAAGTTGCAGTGTGTGT
GAACCCAAGCTAGCGGCACTGTCACGGTCAAGCTCTCTGTCCTCAGCAGC
TACAGCTTGCTACAGCTGTAGATTAGCCTGCAGTTCTAGTGTAGATATAC
TCTGCGGGAGGCGTTTTTCTCGGCGAACCCTCGCCAACACAACTCCAGAA
GATTGCGTACTTCTGTTCTATCTCGCTGGAAATGGTGAGAGCCTGCACTT
CGTGTGTGTAGTTGTCCCCTTGTTTTATGCATTCGGCTCTGTGGGCAGGC
CGCCGAAGGGCCGTCAGTTGTTGTGGTTATCTCGTGAAATCCCTTCTCTC
GGTTCTACACTGAACCGGCAGGCACTCAACTGGGTACAGTAGCCCCCAAA
CACCAACAAATAACGCTCTCCCTTCTCTACCTTGCGTCCCCCTGCCCGAA
ACAAGCAGTCCTTTGGGCTTGCGGAGCTCGACAAGATCCAGCCGGGGTTG
GCGGCGGAGGCTGTGGCTGCTGGTCGTGAGGTTGAAACACTTCATCTCAC
CCGGCCCTCCGGCGAGACGATCGCTAAGGTGGACATGACTCCTATCACCA
AATTGGTGGGCTACCCGTTCATTGGCATTTCACGGCACGCGTTGCAGAAG
GTCCTGCTGGGCCATCTGGAGGATGACGATGTTGAGCTGGGGGCGCGCCT
TGAGGGACTCGATACCCATGAGGGGGAGGGGATCACGGAGCTCCGCTTCC
GCGGACAAAGCGAGGTCGTGCGTGCTCGGGCAGTGTTAGGAGCGGATGGG
CGAAGGTATTGACCGACCGAAGTTGGATTAGGCTGTGACGTGCGGGCGCT
TTTGTCGTTTGTCGGGAAGGGAGTGGAGGACCTTGCTGCAACACTGTAAA
CAAGTCAATACCACCGTCGTTTGGAATACAGCTGAACACCGTCCGCTGGT
GCTCGGCTCTACCTCTTCTGGTATTCCATGCATACGAACCGAATTCCACG
GTTTCTCTTTTTGCCATACCGCACATGGCTTGGATCCACAGGGCGAGGGT
TAGCGGCGCTGTGCAGGCAGGGAAGAACATGGAAGTTCGGAAATCCATGT
TACTATATGTACCTGATCCGTATCATTGTGCCCTATGATGCAGCCTGCTG
AACAACTTAAAACGAGGAAGCACGGTGGCCACCGCAGACCGTATCAAATA
CTCCGTAGGATATTTTTTTGCCCTCATGTTTGGTTTGAACAAGTTAATTT
TAGGGTTTTGAGAAGGACGTATCTTTACAGGAAGTTATGTGTTTGGTGTG
GTCGACCAATCACGCAACTACAAGTATCCGTAGTCCCTTCCGTGCCCCCC
GTCCAAACATGCGGTCACGAATCACCCTCAGCATCTGAATGAATTAAGTT
GACCTTTTGCATCAATACTCTTCTTTTTGTTCCGCGTCGAACCCAGATCC
ATGGTACGAAAGAAGGTCTTGGCGGCCGAAGAAAGAAACTGCGACTGGGC
ACTGACCTGGTGGGCCTTGGCAGATATCCCCGAACCTGCCACACCCAGAG
GGGAGTTCCGCATGTCCTATGCCACGAAGCAGGCTATCTACTACGGCGAG
GTAAAGTGGCCTAATTCACAATAATGTGTACGTCTTTTCGTGCCTGCTAC
AACTGCCGTCGTGTCGTCCATAGTGTGAAGAACGCCATACTGACGAAGGC
ACATCAAAAGCGTCGTGTAGTTTCTGTTTATGGTTCTGATCACGTTGTGT
CAACACCTGCTGGCGGACGCCAAATGGGATGCCCGAGCAGCAGAGATGGC
CAACCACCTGTTTGAGTAAAGAGTCCCGCTCTTCTGCCTCAACAATGCTG
GTTATTCCCAACTCTCTCTCCGATTGATTGGGACATGTTCTTACCAGAAC
AGAGTCAGAGCGCGATTAGAGCAGCTTACCCTCGCGGATTTGTTTTGGGG
GCACTCGGCACTCGATACGGAGATTAGGGGGTTTTGTGTTTCATTGGTGG
TATGTGTTTCTAGAAGGGCCATCCCCCTTCTGCGTGCATGGGCACGCACG
CCTTGCTCACTCGTCCATGATCCAAGGTCTTGAGTCAACCTTCTTCTCTG
CGCTCTGACAACAAGCTGCCCACCTCAAAACAGGTTTCACCACCCGTGGG
CGCAGTGTTTTCTATTCCGGTCCTGTTTTCTCGTTCCCTGCAAGCGGTGG
GCTACTCCCGCGGGGATGGTGATGTCCAACCGTTTTTTGTGTGTAAAGTG
TCATGTTTGCTGCTCTTCTGCTGCCATCACAGGTAGAGGAAGGGGTGACC
ATGTGGTCATTCACGTGTTGGAGAGACGGTGAGATAGAACGCGACCCGGA
ACTACGGGCAGGGCGGGCGCTGAAGGAGTTGGAAGGGTGGCCGGAAGAGG
TGACACTTAAAGTCTGTTTTAAATACAGGACAGCTGTTTCAATGCTGCTG
CTGGTGGGTCAATCAATACCTCTGGTTCGGCGAAGTGCAGCGTGTATTGG
CACGTGTAGAAGACGTCGGGTAAAGGTCTCCAAAGAGCAGGCTAATGTTC
CAGGAAATATTCCCTTTTCTTTATTCAGACCTCATTCAGCCACCCTGGAT
CACGGCGGTAAGATGGGTAGTGATGTAGATTCGGCTGTATGATTGCTGTG
TGCAATGGTACTTACGCAATGACACGTAGTCGCTGTGTGATAAGCGATGG
TTGGTACAACCTATCTTGTGTAGCGACGAGTTAAAGCGAGGAGCTCATGA
ATGAATTGATTGTTGACCGTAGGAGATTAAGACTGTAGAGAGACCACTAG
GTGATGCGAGCCCAACCAGGCTCACCCCCCAACTATCCCGCTTCTTCTGA
TCTCTACAAACAGAGATAGGATCCGGTTCCACCAGCAGGCAATTATTGAA
AGCCCCTGTGACAGCAATGCCTTTACAGTCTCGACGACTGCGTACGGAGT
TTTCCGCTTTCTCGAGACCCTTCGGTACACAGCACGTCGCATTTCTACAC
AATTCTCCACGATATTCACGTGTCGTTTTCTTTCGTGAATTGCGATATAC
TGGTGTCTTCCCGCGTTGTTTCCCACCCGGCGTGAATCATTCATTGTGAT
AAAATCAAAGCTACGAGTATCGTCGGCGTTGCCTATCTGAATGAAGCCGA
TTTGTCATTGCGGGTTTATTTAGCCGATGGTTGAGTTTTCTGTGTTGGCA
GATCACGACCCGATGGTGGACGTGAGCAAAAAAAAGAAAAAACTGCTCGG
GGAACCGTAGAAATATGAGTTGGTCACCGTACAACACTATGAATTCACTG
CTAATCTACCATGGGCTCTTATGTGTGGAAAATATGGATTTGATGTTCGT
TGTAAGAAAATAAAATTAGACAGGTGCGCGTGAGAAAAAGGGTGTGGCGC
TAGAGAAATTCGCCGGCCACAGTCCGTTGTTTTGTTGACAGTATTGACAG
TCGCCTAAGGTCGATATCGCGAGACGTACGCCGTACTTCGAGATCGGTCT
GTCTGTTGTGTGCTTTCATGCGGACCCTGAGATTTTCGATTTTTTCCGAA
ATTGTTCGAAAAGACAAAAAAGAGCGATGAAGACAGGAACACGGCGAATG
AAAGGTGAAGACGAGAGAGAAACAGCGCGCATGGTCGCACATGGCCGCCC
ACTTGAGGCGTATGCTAATGCGCGTGGAAGTCGATGGAACTTGGCGAGGG
GCCATACTTTGCGATGCCGTACCGAAGCATATTCGAGATGTCGCAAGATG
TGCGCCATAGGTCGACATCGGCTTTGAATTCACGGTCGGTCAAGGGTGGG
GGTGTCGGAATGACAGGGGAACACTGCGACCAAAATGAAGTTCCGTCGGA
GAGACTGAGGTTACAGCTTCAGAATATAGGTGCAACGTTACTACTCTGTG
TTTCGTTCACGAGGCTGTAACCGACTGTCGGCTTGCTTTGCAGGTGCGAA
ATGTCGTCCGAAACACGCCCCCGAACAAGATCATCGAGGTTTACGTGGGA
GACAGCCCCTTGCAATGGACGACGTGGAGCAAGCAGCCTGGGGTTAGCTT
GATGGGCGATGCTGCCCACTCAATGCTTCCGACTTTG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig141:519..5255-

>mRNA_E-siliculosus-1a_F_contig141.2421.1 ID=mRNA_E-siliculosus-1a_F_contig141.2421.1|Name=mRNA_E-siliculosus-1a_F_contig141.2421.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2142bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig141:519..5255- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGCCCGCCTTGCGCATATGGCTACTGGCCTCTCTAGTGGTGCTTTC
GGTGGGCGATACCGAGGGATTTGTGGCTCAGCCTGCTTTTGTCAGAAAGT
GTCCTTCAACAGGCCTCGCCTCGTCAGCGACAGCTTCTGCAAGTGCCACG
GCAGCTTCCGGGCAGAAAGTCCTCGACTTGGCCATTGTGGGTGGTGGCCC
TGCTGGACTTGCCGCAGCCGTCGGGTTAAAAGAAAAGGGGTTGAATGTGA
AGGTGTTCGAAGCCGCCCCAGAGTTCTCTGAGAGAGGGGCAGCCGTCTTC
CTCCAGATGGCGCCCGCCTTGCGCATATGGCTACTGGCCTCTCTAGTGGT
GCTTTCGGTGGGCGATACCGAGGGATTTGTGGCTCAGCCTGCTTTTGTCA
GAAAGTGTCCTTCAACAGGCCTCGCCTCGTCAGCGACAGCTTCTGCAAGT
GCCACGGCAGCTTCCGGGCAGAAAGTCCTCGACTTGGCCATTGTGGGTGG
TGGCCCTGCTGGACTTGCCGCAGCCGTCGGGTTAAAAGAAAAGGGGTTGA
ATGTGAAGGTGTTCGAAGCCGCCCCAGAGTTCTCTGAGAGAGGGGCAGCC
GTCTTCCTCCAGCAGTCCTTTGGGCTTGCGGAGCTCGACAAGATCCAGCC
GGGGTTGGCGGCGGAGGCTGTGGCTGCTGGTCGTGAGGTTGAAACACTTC
ATCTCACCCGGCCCTCCGGCGAGACGATCGCTAAGGTGGACATGACTCCT
ATCACCAAATTGGTGGGCTACCCGTTCATTGGCATTTCACGGCACGCGTT
GCAGAAGGTCCTGCTGGGCCATCTGGAGGATGACGATGTTGAGCTGGGGG
CGCGCCTTGAGGGACTCGATACCCATGAGGGGGAGGGGATCACGGAGCTC
CGCTTCCGCGGACAAAGCGAGGTCGTGCGTGCTCGGGCAGTGTTAGGAGC
GGATGGGCGAAGCAGTCCTTTGGGCTTGCGGAGCTCGACAAGATCCAGCC
GGGGTTGGCGGCGGAGGCTGTGGCTGCTGGTCGTGAGGTTGAAACACTTC
ATCTCACCCGGCCCTCCGGCGAGACGATCGCTAAGGTGGACATGACTCCT
ATCACCAAATTGGTGGGCTACCCGTTCATTGGCATTTCACGGCACGCGTT
GCAGAAGGTCCTGCTGGGCCATCTGGAGGATGACGATGTTGAGCTGGGGG
CGCGCCTTGAGGGACTCGATACCCATGAGGGGGAGGGGATCACGGAGCTC
CGCTTCCGCGGACAAAGCGAGGTCGTGCGTGCTCGGGCAGTGTTAGGAGC
GGATGGGCGAAGATCCATGGTACGAAAGAAGGTCTTGGCGGCCGAAGAAA
GAAACTGCGACTGGGCACTGACCTGGTGGGCCTTGGCAGATATCCCCGAA
CCTGCCACACCCAGAGGGGAGTTCCGCATGTCCTATGCCACGAAGCAGGC
TATCTACTACGGCGAGATCCATGGTACGAAAGAAGGTCTTGGCGGCCGAA
GAAAGAAACTGCGACTGGGCACTGACCTGGTGGGCCTTGGCAGATATCCC
CGAACCTGCCACACCCAGAGGGGAGTTCCGCATGTCCTATGCCACGAAGC
AGGCTATCTACTACGGCGAGGTAGAGGAAGGGGTGACCATGTGGTCATTC
ACGTGTTGGAGAGACGGTGAGATAGAACGCGACCCGGAACTACGGGCAGG
GCGGGCGCTGAAGGAGTTGGAAGGGTGGCCGGAAGAGGTAGAGGAAGGGG
TGACCATGTGGTCATTCACGTGTTGGAGAGACGGTGAGATAGAACGCGAC
CCGGAACTACGGGCAGGGCGGGCGCTGAAGGAGTTGGAAGGGTGGCCGGA
AGAGGTGCGAAATGTCGTCCGAAACACGCCCCCGAACAAGATCATCGAGG
TTTACGTGGGAGACAGCCCCTTGCAATGGACGACGTGGAGCAAGCAGCCT
GGGGTTAGCTTGATGGGCGATGCTGCCCACTCAATGCTTCCGACTTTGGT
GCGAAATGTCGTCCGAAACACGCCCCCGAACAAGATCATCGAGGTTTACG
TGGGAGACAGCCCCTTGCAATGGACGACGTGGAGCAAGCAGCCTGGGGTT
AGCTTGATGGGCGATGCTGCCCACTCAATGCTTCCGACTTTG
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