mRNA_E-siliculosus-1a_F_contig1405.2401.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1405.2401.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1405.2401.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 1.650e-104
Identity = 230/393 (58.52%), Postives = 252/393 (64.12%), Query Frame = 1

Query:    1 MGAASAVGRGHLSSKRPVYRYIFSCPAKAQAQAQAISGVCYFNMRAQEEGK-------------------------------------VVPAEETTEGILCIEMRIRMYHDGSMSKLLEKLSKDTDNAAVQLQGPFLINKLAPPPAHSNVIMIAAGTGVNPTFSSRPRLVLVWQSTTEADFYGSDEIMAMQGTTRVLLVTGCYATTMPRMLSLPCAATVGRSNLDSSDSGKP--PPYITPTRIGRGHQQQXXXXXXXGRDENKQTASAAGAKKERTPNGVSKLLPKK--RSISWVDWSARLPCSTLPSCSSLLPCESAA-CQVGGGLVQGSVNREILNTVFGEALITSIAAYNNQRAVNSLLRSDSDGEDEKEGQEVDDGGLVGTDRTAGKLQ 1053
            MGAASAVGRGHL SKRPVYRYIFSCPAKAQAQAQA+SGVCYFNMRAQEEGK                                     VVPAEETTEG+LCIEMRIRMYHDG+MSKLLEKLSKDTDN AVQLQGPFL+NKLAPPPAH NVIMIAAGTGVNP     PR    W S                G  R  L +     T+P   S PC     RSNLDSS SGKP  PPY T  R G G  +QXXXXXX GR+E K++A+ AGAKKER P GV KLL  +  R+  W +       S   S     P +  +  QVG GLV+G VNREIL TVFGEALI+SIAAYN QRA+NSL  SDSD  D KEG+  DD  L+GTD+TAGKLQ
Sbjct: 1102 MGAASAVGRGHLPSKRPVYRYIFSCPAKAQAQAQAVSGVCYFNMRAQEEGKGVVQRPYNAFAVRLLDVEPPTPGGRVAWSKTSAKLPKVVPAEETTEGVLCIEMRIRMYHDGAMSKLLEKLSKDTDNVAVQLQGPFLVNKLAPPPAHRNVIMIAAGTGVNPRTPRFPR-GRGWSSC---------------GRARRRLTS-----TVPTK-SRPC-----RSNLDSSSSGKPKPPPYSTLARDG-GRDEQXXXXXXPGREEKKRSAADAGAKKERAPTGVGKLLTTRTWRNSKWNE-------SPTTSGRRRAPMQDTSNYQVGDGLVRGRVNREILETVFGEALISSIAAYNRQRALNSLACSDSDVGDNKEGEGEDDRDLIGTDQTAGKLQ 1459

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 1.800e-96
Identity = 219/389 (56.30%), Postives = 241/389 (61.95%), Query Frame = 1

Query:    1 MGAASAVGRGHLSSKRPVYRYIFSCPAKAQAQAQAISGVCYFNMRAQEEGK-------------------------------------VVPAEETTEGILCIEMRIRMYHDGSMSKLLEKLSKDTDNAAVQLQGPFLINKLAPPPAHSNVIMIAAGTGVNPTFSSRPRLVLVWQSTTEADFYGSDEIMAMQGTTRVLLVTGCYATTMPRMLSLPCAATVGRSNLDSSDSGKPPPYITPTRIGRGHQQQXXXXXXXGRDENKQTASAAGAKKERTPNGVSKLLPKKRSISWVDWSARLPCSTLPSCSSLLPCE-SAACQVGGGLVQGSVNREILNTVFGEALITSIAAYNNQRAVNSLLRSDSDGEDEKEGQEVDDGGLVGTDRTAGKLQ 1053
            MGAASAVGRGHL SKRPVYRYIFSCPA  QAQAQA+SGVCYFNMRAQEEGK                                     +VPA ETTEGILCIEMRIRMYHDG+MSKLLEKLS+DTDNAAVQLQGPFLINKLAPPP + NVIMIAAGTGVNP     PR    W S   A                         +T+P M S PC     + NLDSS SGKPPPY TP+R G G +Q XXXXXXX        +  A  K++RT  GV KLLPKK   +W +   R   S+ P      P + S+  QVG GLV+G VNREIL TVFGEAL T IAA N QR V SLLRSDSD  DEKEGQ+ DDG L  TD+T+ KLQ
Sbjct: 1108 MGAASAVGRGHLPSKRPVYRYIFSCPANGQAQAQAVSGVCYFNMRAQEEGKGVVQRAYNAFAVRLLDVEPPTPGGRVAWTKGFAKLPKIVPAGETTEGILCIEMRIRMYHDGAMSKLLEKLSQDTDNAAVQLQGPFLINKLAPPPVYRNVIMIAAGTGVNPRTPRSPR-GRGWSSCGRA--------------------RPRPTSTVP-MKSRPC-----KFNLDSS-SGKPPPYRTPSRTGHGDEQXXXXXXXXXXX-----SRPADGKEKRTTTGVGKLLPKK---TWRN--LRRSDSSTPGAHRRPPIQDSSTYQVGDGLVRGKVNREILETVFGEALTTPIAADNRQREVKSLLRSDSDISDEKEGQDEDDGDLTSTDQTSRKLQ 1458

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.280e-57
Identity = 149/381 (39.11%), Postives = 188/381 (49.34%), Query Frame = 1

Query:    1 MGAASAVGRGHLSSKRPVYRYIFSCPAKAQAQAQAISGVCYFNMRAQEEGK-------------------------------------------VVPAEETTEGILCIEMRIRMYHDGSMSKLLEKLSKDTDNAAVQLQGPFLINKLAPPPAHSNVIMIAAGTGVNPTF---------------SSRPRLVLVWQSTTEADFYGSDEIMAMQGTTRVLLVTGCYATTMPRMLSLPCAA-------TVGRSNLDSSDSGKPPPYITPTRIGRGHQQQXXXXXXXGRDENKQTASAA-------GAKKERTPNGVSKLLPKKRSISWVDWSARLPCSTLPSCSSLLPCESAACQVGGGLVQGSVNREILNTVFGEALITSIAA 927
            MGA SAVGRG+L + RPVYRYIF CP   QAQ   I+GVCYFNMRAQE+GK                                           VVPA +TTEG+LCIEMRIR+YHDG+MSKLLE+L+KDTDN AVQLQGPF+I KL PPPAH NV+MIAAGTG+NP                 SSR RL LVWQ+T+EAD YGS+E+  +Q  +  LL      +   R  ++P AA        + ++ L S  +  P         GR  +               +T+S         GA+      G S L   +R +     S R+P +T                V   L  G V+RE+L  VFG +L+  + A
Sbjct: 1419 MGATSAVGRGNLPTTRPVYRYIFLCPG--QAQVLNITGVCYFNMRAQEKGKGVIQRSYNAYAVRVRDTNPTPAVGGMLMGGLSHGGDKGAGTLKVVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKTGLVSPAAASPASSFRTMPSGRRVRVPSGKNSVSSIKSINETSSVVFPEDSDKGARGVEISTGTSILSTVRRHLRT---SERIPSNT---------------SVASALAHGKVSREVLEEVFGPSLLGVVEA 1779

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: D7FX04_ECTSI (Dopamine beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 3.660e-57
Identity = 152/392 (38.78%), Postives = 191/392 (48.72%), Query Frame = 1

Query:    1 MGAASAVGRGHLSSKRPVYRYIFSCPAKAQAQAQAISGVCYFNMRAQEEGK-------------------------------------------VVPAEETTEGILCIEMRIRMYHDGSMSKLLEKLSKDTDNAAVQLQGPFLINKLAPPPAHSNVIMIAAGTGVNPTF---------------SSRPRLVLVWQSTTEADFYGSDEIMAMQGTTRV-------LLVTGCYATTMPRMLSLPCAA-TVGRSNLDSSDSGKPPPYITPTRIGRGHQQQXXXXXXXGRDENKQTASAAGAKKERTP-----------------NGVSKLLPKKRSISWVDWSARLPCSTLPSCSSLLPCESAACQVGGGLVQGSVNREILNTVFGEALITSIAA 927
            MGA SAVGRG+L + RPVYRYIF CP +AQ   Q I+GVCYFNMRAQE+G                                            VVPA +TTEG+LCIEMRIR+YHDG+MSKLLE+L+KDTDN AVQLQGPF+I KL PPPAH NV+MIAAGTG+NP                 SSR RL LVWQ+T+EAD YGS+E+  +Q   R+       LL      +   R  ++P AA   G   L +      P   +P    R            GR  NK + S+  +  E +                   G S L   +R +     S R+P +T                V G L +G V+RE+L  VFG +L+  + A
Sbjct:  727 MGATSAVGRGNLPTTRPVYRYIFLCPGQAQVLPQNITGVCYFNMRAQEKGNGVIQRSYNAYAVRVRDTNPTPTAGGMLMGGLSHGSDKGAGTLIVVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQYDRRLCEAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKAGLVSPAAASPANSFR--------TMPSGRPSNKNSVSSIKSINETSSAVFPEDSEKEGRGVEISTGTSILSTVRRHLRT---SERIPSNT---------------SVAGALARGKVSREVLEEVFGPSLLGVVEA 1092

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 4.480e-54
Identity = 113/227 (49.78%), Postives = 138/227 (60.79%), Query Frame = 1

Query:    1 MGAASAVGRGHLSSKRPVYRYIFSCPAKAQAQAQAISGVCYFNMRAQEEGK--------------------------------VVPAEETTEGILCIEMRIRMYHDGSMSKLLEKLSKDTDNAAVQLQGPFLINKLAPPPAHSNVIMIAAGTGVNP---------------TFSSRPRLVLVWQSTTEADFYGSDEIMAMQGTTRVLLVTGCYATTMPRMLSLPCAA 540
            MG  S +GRG L +KRP YRYIFSCP +AQA  + I GVC+F+M  Q  GK                                VVPA+ET+EG+LCIEMRIR+YHDG+MS+LLEKLSKDTDN A+QLQGPF+I KL PPPAH NV+MIAAGTGVNP                 S+R RL L+WQS +EA+ YGS+EI  MQ  ++ LL      +   R  ++P AA
Sbjct:  940 MGTDSPIGRGLLFTKRPTYRYIFSCPGQAQALVETIHGVCHFHMPGQVPGKGVIQRAYNAYAVRVQGFVDGKDGSGKGATPPRVVPAQETSEGVLCIEMRIRLYHDGAMSQLLEKLSKDTDNPAIQLQGPFIITKLVPPPAHRNVVMIAAGTGVNPMVQQIRDYLALPRDQAHSTRSRLCLIWQSMSEAELYGSEEITEMQAKSKGLLEVIVLVSGDQRRRNVPGAA 1166

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 4.290e-44
Identity = 126/342 (36.84%), Postives = 173/342 (50.58%), Query Frame = 1

Query:    1 MGAASAVGRGHLSSKRPVYRYIFSCPAKAQAQAQAISGVCYFNMRAQEEG-----------------------KVVPAEETTEGILCIEMRIRMYHDGSMSKLLEKLSKDTDNAAVQLQGPFLINKLAPPPAHSNVIMIAAGTGVNPTF---------------SSRPRLVLVWQSTTEADFYGSDEIMAMQGTTRVLLVTGCYATTMPRMLSLPCAATVGRSNLDSSDSGKPPPYITPTRIGRGHQQQXXXXXXXGRDENKQTASAAGAKKERTPNGVSKLLPKKRSISWVDWSARLPCSTLPSCSSLLPCESAACQVGGGLVQGSVNREILNTVFGEALI 912
            MGA S+ GRG+L + RPVYRYIF CP +AQ           + +R Q+                         KVVPA ET  G+LCIEMRIR+Y DG+MSKLLE L+KD+DN  V+LQ PF+I KL PPPAH NV+MIAAGTG+NP                 SS+ RL LVWQ+T+EAD +G+DEI AMQ  +  LL      +   R  ++P AA    +      +G     I+P+     +  +        R+ +  T S      E  P     +    RS+   + S      T+ + +S +    ++  VG  L +G V+RE+L+ VFG  L+
Sbjct: 1198 MGAVSSFGRGYLPTSRPVYRYIFLCPGQAQILGVVQRSYNAYAVRVQDTNGSLTPGAIMGGLSQGSDKGQGTLKVVPAGETKAGVLCIEMRIRLYTDGAMSKLLENLAKDSDNPTVRLQAPFVIQKLVPPPAHRNVMMIAAGTGINPMVQQIRDYLALPKSGAQSSKSRLALVWQATSEADLFGADEIAAMQEKSDGLLEVVMLISGQHRKRNIPGAAFRKGAETFLKKAG----LISPSVSAPSNSIRHWTPGRPSRELSMGTIS------EAKPG----VFVSGRSVVRDNTSTSASTKTIATRASSIERRMSSTVVGT-LTRGKVSREVLDEVFGPNLL 1524

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: A0A6H5JTF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTF1_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 1.780e-35
Identity = 123/292 (42.12%), Postives = 145/292 (49.66%), Query Frame = 1

Query:  376 FSSRPRLVLVWQSTTEADFYGSDEIMAMQGTTRVLLVTGCYATTMPRMLSLPCAA--------------------------TVGRSNLDSSDSGKPPPYITPT--RIGRGHQQQXXXXXXXGRDENKQTASAAGAKKERTPNGVSKLLPKK--RSISW------------------------------VDWSARLPCSTLPSCSSLLPCESAAC------QVGGGLVQGSVNREILNTVFGEALITSIAAYNNQRAVNSLLRSDSDGEDEKEGQEVDDGGLVGTDRTAGKLQ 1053
            FS RPRLVLVWQSTTEADFY +DEI AMQ  +  LL      +   R  + P AA                          T   SNLDSS S         +  R G G    XXXXX  GRDE K TA+ AG KKER P G+  LLP +  R++ W                               +   ++P   +    +    +   C      QVG GLV+G VNREIL  VFGEAL++SIAAYN QRA+NSL  SDSD  DEKEGQ  DDG L+GTD+TAGKLQ
Sbjct:   19 FSKRPRLVLVWQSTTEADFYSTDEITAMQEKSNGLLEVTALTSEGGRRRNAPGAAFRKARDIAWNVFGSPAPSNTSSANPFTPAGSNLDSSSSEXXXXXXXXSLARDG-GRXXXXXXXXTPGRDE-KHTAADAGTKKERAPKGIGNLLPTRTWRNVKWKESPTTSDHRRAPMQDTSVSFRHVHEFGVATEIEFKMPEKDVFRVKAPHREKVGICVMGENYQVGDGLVRGRVNREILENVFGEALLSSIAAYNRQRALNSLACSDSDVGDEKEGQGEDDGELIGTDQTAGKLQ 308

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: A0A6H5KC42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC42_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.690e-21
Identity = 80/249 (32.13%), Postives = 104/249 (41.77%), Query Frame = 1

Query:   46 RPVYRYIFSCPAKAQAQAQAISGVCYFNMRA---------------------QEEGK--VVPAEETTEGILCIEMRIRMYHDGSMSKLLEKLSK--------------------------------------------------------------------------------DTDNAAVQLQGPFLINKLAPPPAHSNVIMIAAGTGVNPTFSSRPRLVLVWQSTTEADFYGSDEIMAMQGTTRVLL 483
            RPV++++F+CP  A A   ++ GVC+F MR                       EEGK  VVPA E++EG+LC+EMRIR+Y DG MS LL +L K                                                                                + DN AVQLQGPFL ++L PPPAH NV+MIAAGTGVNP+  +          + EAD Y +DE+ A+Q     LL
Sbjct:  422 RPVHKFVFACPGTAAALVGSMEGVCHFKMRLTQEAGMTVVERAYNAFAVRVLDEEGKRRVVPALESSEGVLCVEMRIRLYPDGLMSGLLARLIKVVPTVAITGHCSTHKNHKLFISASNKLSRSPIGDRPTNRSTDGSTYALDRLFWEERSIRVSPTIRAPCSCCGWVRGGGHQNLDNPAVQLQGPFLQHRLTPPPAHRNVVMIAAGTGVNPSECN----------SVEADLYCTDELTALQAKANGLL 660

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: A0A6H5K303_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K303_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.210e-19
Identity = 47/81 (58.02%), Postives = 60/81 (74.07%), Query Frame = 1

Query:  256 KDTDNAAVQLQGPFLINKLAPPPAHSNVIMIAAGTGVNPTF-----------SSRPRLVLVWQSTTEADFYGSDEIMAMQG 465
            ++TDN +V+LQ PF+I KLAPPPA+ NVI+IAAGT +NP+            SSR RL LVWQ+T+EAD +G+DEI AMQG
Sbjct:    8 QETDNPSVKLQDPFVIQKLAPPPANCNVILIAAGTSINPSVPLLPSEESGAPSSRSRLALVWQATSEADLFGADEIAAMQG 88

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BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Match: D8LN38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN38_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.360e-19
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 1

Query:  199 MRIRMYHDGSMSKLLEKLSKDTDNAAVQLQGPFLINKLAPPPAHSNVIMIAAGTGVNPT 375
            M IRMYHDG+MSKLLEKLS+D DN  VQLQ PFLI KLAP PAH  VIMIAAGT VNP+
Sbjct:    1 MHIRMYHDGAMSKLLEKLSEDADNPTVQLQVPFLIEKLAPRPAHRKVIMIAAGTAVNPS 59

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1405.2401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
D7G7J2_ECTSI	1.650e-104	58.52	Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
D7G7J1_ECTSI	1.800e-96	56.30	Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A6H5JBL8_9PHAE	1.280e-57	39.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FX04_ECTSI	3.660e-57	38.78	Dopamine beta-monooxygenase, putative n=1 Tax=Ecto...	[more]
D7FQW8_ECTSI	4.480e-54	49.78	Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
D8LFE6_ECTSI	4.290e-44	36.84	Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A6H5JTF1_9PHAE	1.780e-35	42.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KC42_9PHAE	1.690e-21	32.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K303_9PHAE	1.210e-19	58.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LN38_ECTSI	1.360e-19	77.97	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1405	contig	E-siliculosus-1a_F_contig1405:1083..7554 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	0
Cds size	1119
Model size	1119
Exons	9
Ec32 ortholog	Ec-02_000500.1
Ec32 ortholog description	Hypothetical protein
Hectar predicted targeting category	mitochondrion
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	S
EggNOG OGs	KOG2408@1,KOG2408@2759
EggNOG free text desc.	peroxidase activity
Seed eggNOG ortholog	2880.D7G7J2
Seed ortholog evalue	2.5e-94
Seed ortholog score	352.4
Taxonomic scope	Eukaryota

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1405.2401.1	prot_E-siliculosus-1a_F_contig1405.2401.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1405 1083..7554 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1405:1083..7554+
coding sequence from alignment at E-siliculosus-1a_F_contig1405:1083..7554+

protein sequence of mRNA_E-siliculosus-1a_F_contig1405.2401.1

>prot_E-siliculosus-1a_F_contig1405.2401.1 ID=prot_E-siliculosus-1a_F_contig1405.2401.1|Name=mRNA_E-siliculosus-1a_F_contig1405.2401.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=373bp
MGAASAVGRGHLSSKRPVYRYIFSCPAKAQAQAQAISGVCYFNMRAQEEG
KVVPAEETTEGILCIEMRIRMYHDGSMSKLLEKLSKDTDNAAVQLQGPFL
INKLAPPPAHSNVIMIAAGTGVNPTFSSRPRLVLVWQSTTEADFYGSDEI
MAMQGTTRVLLVTGCYATTMPRMLSLPCAATVGRSNLDSSDSGKPPPYIT
PTRIGRGHQQQPPPYRTPGRDENKQTASAAGAKKERTPNGVSKLLPKKRS
ISWVDWSARLPCSTLPSCSSLLPCESAACQVGGGLVQGSVNREILNTVFG
EALITSIAAYNNQRAVNSLLRSDSDGEDEKEGQEVDDGGLVGTDRTAGKL
QSNSSSTVICCRHPMYGTIGDSS

mRNA from alignment at E-siliculosus-1a_F_contig1405:1083..7554+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1405.2401.1 ID=mRNA_E-siliculosus-1a_F_contig1405.2401.1|Name=mRNA_E-siliculosus-1a_F_contig1405.2401.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6472bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1405:1083..7554+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGAGCCGCCAGTGCCGTGGGCCGCGGTCACTTGTCCAGCAAGCGCCC
GGTCTACAGATACATTTTTTCGTGTCCCGCTAAGGCGCAAGCCCAGGTAA
GCACACCGTGTCCTTCGCCGTGCTCCGCTCTAGACGCGAGTACACGCCCG
CCGAAGAAACTAGCTTTTTTGCAACTCCCTCTGCTCTCGAAAAACACGAC
TGCGAGAGACACGGCGATCAACGAGATAGGCCATCGATCCTGACTGATAG
ACGAAACATCAGAACACCGACAAGAGGGCGGATACATCGGTTAGGGCCTG
TCGAATACGTACGTTGAATGTGACACCCATGGCAGCACAGGAAGTGAGGT
CGGTCAAGTCGATGCCTCTTGTGGTCCCGCCGTGGGCGCTGATATGGCAC
CAAATCTCATCCACGCCACATGACACGAAAACGCCAATTTTTCGTCGGAC
TAGGCCTCTCACGCTGGTATCTCTTAGGTCTCGCAGAATTTACACCACAG
TTTCTCGATTATTTATTGTGCGGTCCCACATTTTTTGGACCACGTCGTAG
GCCAACCGACATGCAAATTGCCAGGTGACGATAGTTTGTACCGCCAAATT
TATTCTGGACGGTCTTCAAACCTTTCGAATGTTTTTTGGGCGCATCAGCT
GCGGTGATATAGGGCGAAGGGCACCCAGGAGGTTATTTAAGATATATTTC
CATTATTTTCTTGCCCCTACGTTGTTCACGAAAAATATTCGGGCGTGGTC
CAAGTTGTTGCGTACACAAGACAAATTCACCCTCGATACAAACGCAATAT
TTCTTCGGTCCCGTCATTTTCGGCGCAACAGGCGCAGGCGATTTCGGGTG
TCTGCTACTTCAACATGCGCGCACAGGAAGAGGGAAAGGTGAGGTTTGAA
ACGAATGGGCAGGGTGAAAGCTCTGTGGGTTCGCACTTTCATTAACCTTT
AGGGCTCGGGTAACTGAAGCATTATGGCCGCTCGCGCGGCCCTAGCGACC
ACATGAGTGAAGACAGCGCATTCTGCGCCCGCCGATATCATTGGCATTTT
TCAGTGCTATATTTTCTTGCAAAATCCGTGAAGCTCAACAACAACCAATG
ATAATATTCGAGTTACTTCGGCCACCACCGCATCTGCCTCCCGTTCCTGT
TTGTGTACTGGCGGCAGTTCCACATAGGAGATGACAGAGGGTGCTCGCCT
CCATTGGGCCTGATATTAACACGAAACATAACCATACAGGGAGACCCCTT
GTACCCTCCGAAACAGCAGTGTATGAGAGTTACTCATTGTATATTAGTGC
GCATAGAACAACAACTCTGGGAAGTCCACAGAGAAAAAGAATACTGTTGT
GGGTGGCCGGAGTTCCTGACGAAGATAATCAACTGTGGTAGCCCTCTCCA
GACCCGCCTGGACAGCTCATCTAGATAATCAATTTGGCCAAACACGATTT
AGAAATCGGGGATAAACCTCCCAAAGTTAAACGTACCACAACAGCCGGAC
GACTACCACAATCTGCATCATCAGTGAGTGAGACATCCAATATTGTTCGA
CAATGTCCACCAATTTCAGTTTCAAGAACCTCAGCGAAGCGACCATTGTC
ACCAGTTTTCTATGAGTATATGTCGTTCCTTGTTCAGTCCAAGCCAAACT
GCGCTACTGAGCACGTGTGCGTCGCTTCGTTGTCACCGGCTTTGTTGATG
ATCGCGGGTAACAATCCTGCGACGATGCGCCCATCTCAACGTGGTTTGCG
TCTTGGCGACAGGGCATAGTTCAGCGGGCGTACAACGCCTTTGCTGTGAG
ATTGCTGGACGTTGAACCACCCACACCGGGCGGGAGGGTGGCCTGGAGCA
AGACTTCTGCCAAGCTGCCGAAGGTCAGCACACTCCAACATATCGGTCGG
GCGAAATATGTTCTCGATGTTGAAGACGTAGGTTTCTTTGCTCCTCGCAA
GGTACAGAGCAACCTGGACGGCAGAGGGTGTCGGAGCAATGGGGAACACG
GCAAAAGTCTCGATATGGCCTAGCGGCAAATATGTGCCGCTAGGTTCGTT
CGAGTCCGGCATCAGTACCTCCGTAGACGTATGTGTCTAAACATCGTGGC
CATTTTTTCTGTATGTGAAAGGTTGTACCCGCGGAGGAGACTACGGAGGG
CATACTGTGCATCGAGATGCGCATCAGGATGTACCACGACGGGTCCATGA
GCAAGCTGCTAGAAAAACTCTCCAAGGTGAGCTCTACGATCGACCCCTTA
ACGAGACGCACTCCACCAGGTTGGCGAGGTTGGTTGCGTTGCGTTTTGCC
GCAAACGTTCCTCGGGTATCGAACTTAACTGTCTCGTAAGGCCTTTGCCG
CGGATTGTTTTTTGGGACGTGCACATTTCTCGATAGAGTTGCGGTACACC
GGTGAAAGACAATTTTCTTTTTTGGTTTTTACTTCTGAAACTTTGTGGCA
CGCGTACCAATCGTCTTGAGGGTCCTAGGTAGATCAAGATGCGGTTGAAA
TGTTGTTACTTCACCTTGAAAGGGCTGTCGTGGATGAAATTGATGCACGG
GAACATGTGTCAAGTAACGTACTCTAGAGGCAACTGTTCCACCGAGGAAA
CCTGTACGCTTAGCACATGTATCATTAGATAAAGAGTCATACTGAAGCTC
AGGAACACAATCGACCTTTCCCAATCAAAGTCATGCTTCGCTTGGATGCT
GAGCACCCAGACTGAACGAAATTGCGCCCAAACAACCCGTGTCCAGGATA
CGGACAACGCTGCTGTCCAGCTGCAAGGACCGTTCCTCATCAACAAGCTC
GCTCCGCCACCGGCCCACAGCAACGTCATCATGATTGCGGCAGGCACAGG
CGTCAACCCAAGTAAGCAGCACATTCTCTGACGCTTGTACTCTGCTTCTA
TTGCATCCCTCCCGATTCTTGTGGCGACATCGCCGAGTGCGCACTGTGTC
GCGGAAATTCCCTCCGCTGACAAGGCTCATGAGCTGAGTTCGGCTTCTAT
TATCGTTTGTCTTGGGTTCGAACCGCAGGCTGCACTTGAGATTTTTTTCG
TGGATACTCTCGGCCAGCGTTTGTGTAAAGGAAAGACTCGCTTGAGATCT
TGGAGCAATACCCCGGGTGTAGTGGGTGACGATGAGGCCAATGAAGCGAA
ATATGGACTGTAGATAGCAGTGCTGCCGAGCTGAGGCACCTTCCTCTGAG
TGAAGGGGTCGGGTCATTCGGACCCCGTGACTAACTTTTATGGGAGCCGA
AATCAAACAATTTTACTATAATAGCGTAGACATCCGCTCCCTTTCGAATA
GAAGACGGGAAAACATGGAATTTGATCATCTAAACGTTTTGGCGGTGTAG
CCACATCTGCTCTCGTACATTGCCGTGCAATGAATTTCAGAGATCGTTTG
TTCACCACTTCGTGATGAATTACCTATGGCGTTGTCCAGACCCTGGGCGG
GGCACAGTCCATGACCGCAAGAGACCGCTGGCTCCTTCATCTAATATCTC
CCCGTGAGGCGTGCTGGACGATGCAGCGCTTGTGCCTTTGTCGTACGGCG
TATCTCTCGCCGCCAAGGATGTCATGACACCGCCGCACGACACATTAAAC
GAAAGCGGTGCTAAAGCTGCTCGATGACGAAAGCAACGACGTTCAGCAGC
CTGTTGGCGCCCTCTCTTGACTTCCCCACGCAACCTACTCTCCCCCCGCG
TGAACTGACTCTCGATATTACGTCCCTTACCGGTGGTCTTCGACGGCCGA
AAAAACGGCCCACGGCACAGTGGTCCAGCAGATTCGGAACTATCTCAGCG
TTTTCAGGTGGGTGGTAAACCGTAGAAAATGGCGATAATCACCACTTGCA
CGACTTTTCCGAACGCGTGGTGTCTTGCCGCCAGCTCTTGTGAACAGCAG
AAGAGACGATATCTCGCGCTCACTGCGGGATCCCTACCTTCGCACGGTAA
TTTGCCGCAGGGACACAGCGTTCTCCAGCAGGCCGCGGCTGGTCCTCGTA
TGGCAGAGCACGACCGAGGCCGACTTCTACGGTTCCGACGAAATCATGGC
CATGCAGGTTAGGCACCTCTTCATGGCTCAGTGTGCAAAAAGTTGGAAGC
ATCTCCAATCGGCAACTTGGTCATACGGACATGGCTGGCCCTTTGCCTTC
CGCCGGAGGTTCCCTTCCGAGAAAAGTCCCGACCAACGTCCCGACCTTTT
CCACCGATGCATCCGGCTTGCCCTTTCTTATTGAATCGTTGTGAATCCAG
GAGAAGAGTGATGGACTTCTCGAAGTGACTGCTCTCACCAGTGAAGGAGG
TCGTCGTCGGAATGCTCCCAGTGCAGCCTTTCGCAAGGCGCGTCATATGG
CCCGGAACATCTTCGCTTCGCCGGCGCCTTCGAATACCAGCTCCGCTAAT
CCCTTCACTCCTGTGGGGTACGGCAACGCGAATGTTTGACACCCTTTCGG
TTATCCTCCCCTGACACAGCGACTATTTGTTTGAAGTGCGTGTCCGTTGT
CTGACAATAGCATGGTGTACCAAAGAATGACCGCGTTTCGCGCTTCTTCA
GTGTCCAGCCTTGCTCTGCTTGGCCCACTCGCTTTGCAAAGTCCCTGCAA
GGCCAAACCACCTAGCGGGCGCAGCATGTGTAATTCTGCACCACCTTGGT
TGGTGCTTGATTGCCGTGGGCGCGCTTCCCAACTACGAAGTTCGAAGTTC
CCGTATTCCCTTGTCTCATATCTACGTACACTTGTGGTTACGGAAGACGC
CTCTCTCACAACCAGGGTACGACGAGAGTCCTACTTGTGACCGGCTGTTA
TGCAACCACAATGCCACGAATGCTGAGTCTACCTTGTGCTGCAACCGTCG
GCAGGTCCAACCTAGACAGCAGCGACTCTGGGAAACCTCCACCCTATATC
ACTCCGACCCGAATCGGTCGAGGGCATCAGCAGCAGCCACCCCCGTACCG
CACTCCGGGTCGTGACGAGAATAAGCAAACTGCCTCTGCAGCAGGGGCCA
AGAAAGAAAGGACACCGAATGGCGTTAGCAAGCTACTTCCCAAGAAGGTG
AGACGCACCACTTGACAGTAACGCACTGGAAAATTCGCGTACGTAAAAAC
CACGCCCAGACCTATTATTGTCACACGGATGGAGCTCTGGCGTTGCCCAG
ACAGTTGAATGGCGAGTCCCGGACGTATGATTTTGTCCGTGACTACAGTA
ATCACCAAAACTATGCAGCTAGGCCCGATGGAAACCACCAGCGGTCTATC
TCTTGGGTTGATTGGTCGGCTCGACTACCCTGTAGCACATTGCCGTCGTG
CTCTTCCTTGTTGCCGTGCGAAAGTGCAGTGAGGACAGCTTATGAACAGC
GGCGACATCTAGCGGGGGATCATGTCGTCAAACGGGGAAAATACAGATTC
CACCCTGATACTGTTACGCTCCAACGTTTCTGGTTGCTTCGAGGGTACTG
GCACGTTTTTTGCGCGGAACGACACATTCCCAACCGCGCAGCTCGATGGC
ATGCCAGAGGAAAACGCCAAACAGTGTCGCTTCCGAAAGCTGTAATACAA
GAGCAAGGCCCGTGTACTCTCCGCGAGATATTGTTGATGGTCGGGCCGTA
CCGCATCAAGGCAGGGGGTCTCGTTCGAGCTCTTGATGCTGATGTTTGAT
GTGTCGTGTGTCTGAAGGGAACGACTGGATCAGCTTTGTTGCCTGGAAAA
GTCTGGTAATGTTCATGTCATTCCATCCCGCATATTTTATGACCACACCT
TGCGTGATGTCGTGGCGCGTTGCACGTTCCGACGGATGGCTATTGTTCAT
GCTGCTGTAGCAGTAGGTGTACACTTGTCGCCGTTGAGCCTACGCCCCGT
CCGCCGGATTTTTGTCATTGTCAGGCGTGTCAAGTGGGAGGTGGTCTTGT
TCAAGGCAGCGTAAACCGGGAGATCCTCAACACGGTCTTCGGCGAAGCCC
TGATCACCTCAATCGCGGCGTACAACAACCAGCGAGCGGTGAACAGTCTT
CTTCGCAGTGACAGCGACGGGGAGGACGAGAAGGAAGGGCAAGAGGTGGA
CGATGGGGGCCTCGTTGGCACCGACCGAACCGCAGGGAAACTTCAGGTGA
CAGCTAAGAAAAGTTGTTGGATCGTGGCCGGTATCTCCATGTTGTTTTTT
GTGCAAAGAAAGGAGCGCAGGTACGACGGTGGAACCTGCAACGAACCCGT
CGACTGCATGTACGACTTATGCCATTCCATTGTCTAGGAAAGCAGTAGCA
GCAACACGGTCACCACACACCAGCGGTGTCTGGGGTCTGGGGACATACCT
TTCGACACTCCTTTCGCTGCTTCTTCGTCGTATAGAGAGTTTGGGATCTC
GTATTTGGCGAATTGCTCTCATGAAATGAAATGAACTCTTGCTCCTCATC
GCCAAGAGCAACTCCAGCAGCACAGTAATTTGTTGTCGCCATCCTATGTA
TGGCACCATCGGCGATTCGAGC

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1405:1083..7554+

>mRNA_E-siliculosus-1a_F_contig1405.2401.1 ID=mRNA_E-siliculosus-1a_F_contig1405.2401.1|Name=mRNA_E-siliculosus-1a_F_contig1405.2401.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2238bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1405:1083..7554+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGAGCCGCCAGTGCCGTGGGCCGCGGTCACTTGTCCAGCAAGCGCCC
GGTCTACAGATACATTTTTTCGTGTCCCGCTAAGGCGCAAGCCCAGATGG
GAGCCGCCAGTGCCGTGGGCCGCGGTCACTTGTCCAGCAAGCGCCCGGTC
TACAGATACATTTTTTCGTGTCCCGCTAAGGCGCAAGCCCAGGCGCAGGC
GATTTCGGGTGTCTGCTACTTCAACATGCGCGCACAGGAAGAGGGAAAGG
CGCAGGCGATTTCGGGTGTCTGCTACTTCAACATGCGCGCACAGGAAGAG
GGAAAGGTTGTACCCGCGGAGGAGACTACGGAGGGCATACTGTGCATCGA
GATGCGCATCAGGATGTACCACGACGGGTCCATGAGCAAGCTGCTAGAAA
AACTCTCCAAGGTTGTACCCGCGGAGGAGACTACGGAGGGCATACTGTGC
ATCGAGATGCGCATCAGGATGTACCACGACGGGTCCATGAGCAAGCTGCT
AGAAAAACTCTCCAAGGATACGGACAACGCTGCTGTCCAGCTGCAAGGAC
CGTTCCTCATCAACAAGCTCGCTCCGCCACCGGCCCACAGCAACGTCATC
ATGATTGCGGCAGGCACAGGCGTCAACCCAAGATACGGACAACGCTGCTG
TCCAGCTGCAAGGACCGTTCCTCATCAACAAGCTCGCTCCGCCACCGGCC
CACAGCAACGTCATCATGATTGCGGCAGGCACAGGCGTCAACCCAACGTT
CTCCAGCAGGCCGCGGCTGGTCCTCGTATGGCAGAGCACGACCGAGGCCG
ACTTCTACGGTTCCGACGAAATCATGGCCATGCAGCGTTCTCCAGCAGGC
CGCGGCTGGTCCTCGTATGGCAGAGCACGACCGAGGCCGACTTCTACGGT
TCCGACGAAATCATGGCCATGCAGGGTACGACGAGAGTCCTACTTGTGAC
CGGCTGTTATGCAACCACAATGCCACGAATGCTGAGTCTACCTTGTGCTG
CAACCGTCGGCAGGTCCAACCTAGACAGCAGCGACTCTGGGAAACCTCCA
CCCTATATCACTCCGACCCGAATCGGTCGAGGGCATCAGCAGCAGCCACC
CCCGTACCGCACTCCGGGTCGTGACGAGAATAAGCAAACTGCCTCTGCAG
CAGGGGCCAAGAAAGAAAGGACACCGAATGGCGTTAGCAAGCTACTTCCC
AAGAAGGGTACGACGAGAGTCCTACTTGTGACCGGCTGTTATGCAACCAC
AATGCCACGAATGCTGAGTCTACCTTGTGCTGCAACCGTCGGCAGGTCCA
ACCTAGACAGCAGCGACTCTGGGAAACCTCCACCCTATATCACTCCGACC
CGAATCGGTCGAGGGCATCAGCAGCAGCCACCCCCGTACCGCACTCCGGG
TCGTGACGAGAATAAGCAAACTGCCTCTGCAGCAGGGGCCAAGAAAGAAA
GGACACCGAATGGCGTTAGCAAGCTACTTCCCAAGAAGCGGTCTATCTCT
TGGGTTGATTGGTCGGCTCGACTACCCTGTAGCACATTGCCGTCGTGCTC
TTCCTTGTTGCCGTGCGAAAGTGCACGGTCTATCTCTTGGGTTGATTGGT
CGGCTCGACTACCCTGTAGCACATTGCCGTCGTGCTCTTCCTTGTTGCCG
TGCGAAAGTGCAGCGTGTCAAGTGGGAGGTGGTCTTGTTCAAGGCAGCGT
AAACCGGGAGATCCTCAACACGGTCTTCGGCGAAGCCCTGATCACCTCAA
TCGCGGCGTACAACAACCAGCGAGCGGTGAACAGTCTTCTTCGCAGTGAC
AGCGACGGGGAGGACGAGAAGGAAGGGCAAGAGGTGGACGATGGGGGCCT
CGTTGGCACCGACCGAACCGCAGGGAAACTTCAGGCGTGTCAAGTGGGAG
GTGGTCTTGTTCAAGGCAGCGTAAACCGGGAGATCCTCAACACGGTCTTC
GGCGAAGCCCTGATCACCTCAATCGCGGCGTACAACAACCAGCGAGCGGT
GAACAGTCTTCTTCGCAGTGACAGCGACGGGGAGGACGAGAAGGAAGGGC
AAGAGGTGGACGATGGGGGCCTCGTTGGCACCGACCGAACCGCAGGGAAA
CTTCAGAGCAACTCCAGCAGCACAGTAATTTGTTGTCGCCATCCTATGTA
TGGCACCATCGGCGATTCGAGCAGCAACTCCAGCAGCACAGTAATTTGTT
GTCGCCATCCTATGTATGGCACCATCGGCGATTCGAGC