mRNA_E-siliculosus-1a_F_contig14033.2391.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A0F9W5A9_9ZZZZ (UDP-N-acetylmuramate dehydrogenase n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9W5A9_9ZZZZ) HSP 1 Score: 435 bits (1119), Expect = 1.200e-151 Identity = 215/250 (86.00%), Postives = 225/250 (90.00%), Query Frame = 1
Query: 1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLIN 750
AHVGAGVNWH VMATAERGLWGIENLALIPG CGAAPVQNIGAYGVEL DTLQAV+VME ATG TYWLSA+EC FGYRDS FKG L NKVVITQLVLRLSR+P PRLNYGDLAARL PTPLEVA+AVCAIRREKLPDP VLANAGSFFKNPLVS+Q +QLLK++PTMP FPQ QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDR GLM+ ASAIADKVEA FGVRLEPEPR+I
Sbjct: 105 AHVGAGVNWHDLVMATAERGLWGIENLALIPGCCGAAPVQNIGAYGVELGDTLQAVKVMEFATGATYWLSAKECAFGYRDSAFKGPLANKVVITQLVLRLSRKPTPRLNYGDLAARLPQAPTPLEVAEAVCAIRREKLPDPQVLANAGSFFKNPLVSDQSVAQLLKIYPTMPHFPQGKGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRDGLMKTASAIADKVEARFGVRLEPEPRVIK 354
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A0D6EAH0_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=4 Tax=Halomonas TaxID=2745 RepID=A0A0D6EAH0_9GAMM) HSP 1 Score: 428 bits (1101), Expect = 3.480e-149 Identity = 212/253 (83.79%), Postives = 226/253 (89.33%), Query Frame = 1
Query: 1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSS--TPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
AHVGAGVNWH VM TA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATG WLS+Q+C FGYRDS+FKG L VVITQLVLRLSR PAPRL YGDLAARL++ TPTPL VA+AVCAIRREKLPDP VLANAGSFFKNPLVS+QWA+QLLK HP+MP FPQ+ QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM+ A IA +VEA FG+RLEPEPRL+NP
Sbjct: 85 AHVGAGVNWHTLVMTTAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGQVDWLSSQQCAFGYRDSLFKGELAGSVVITQLVLRLSRTPAPRLGYGDLAARLANSLTPTPLAVAEAVCAIRREKLPDPQVLANAGSFFKNPLVSHQWAAQLLKEHPSMPHFPQEGGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMKTADYIAAQVEARFGLRLEPEPRLVNP 337
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: UPI0018689F40 (UDP-N-acetylmuramate dehydrogenase n=1 Tax=Halomonas sp. FME64 TaxID=2742613 RepID=UPI0018689F40) HSP 1 Score: 423 bits (1087), Expect = 4.380e-147 Identity = 208/250 (83.20%), Postives = 224/250 (89.60%), Query Frame = 1
Query: 4 HVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
HVGAGVNWHA VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQ+VQVME+A+G WLSAQEC FGYRDSVFKGA+ +KVVITQLVLRLSR+PAP+L YGDLAARLS PTPLEVA+AVC IRREKLPDP VLANAGSFFKNPL+S+ A++LL+ +P MP FPQ QTKLAAGWLIDQCGLKGMRDG FGVHQHQALVLVHFGGGDR GLM+IAS IA +VEA FGVRL PEPRLINP
Sbjct: 86 HVGAGVNWHALVMATARRGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQSVQVMEVASGQLAWLSAQECQFGYRDSVFKGAMADKVVITQLVLRLSRKPAPQLGYGDLAARLSPVPTPLEVAEAVCTIRREKLPDPKVLANAGSFFKNPLISDDQAARLLRQYPDMPHFPQMKGQTKLAAGWLIDQCGLKGMRDGVFGVHQHQALVLVHFGGGDRHGLMKIASYIAVQVEARFGVRLSPEPRLINP 335
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A2A3XIA2_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A3XIA2_9GAMM) HSP 1 Score: 420 bits (1080), Expect = 4.750e-146 Identity = 209/250 (83.60%), Postives = 224/250 (89.60%), Query Frame = 1
Query: 1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLIN 750
AHVGAGVNWHA VMATA RGLWGIENLALIPG+CGAAPVQNIGAYGVELADTLQ+VQVMELA+G WLSAQEC FGYRDSVFKGA+ +KVVITQLVLRLSR+PAP+L YGDLAARLSS PTPLEVA+AVC IRREKLPDP VLANAGSFFKNPL+S++ A+ LL +P MP F Q QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDR GLM+IAS IA +VEA FGVRL PEPRLIN
Sbjct: 83 AHVGAGVNWHALVMATARRGLWGIENLALIPGNCGAAPVQNIGAYGVELADTLQSVQVMELASGQLAWLSAQECQFGYRDSVFKGAMADKVVITQLVLRLSRKPAPQLGYGDLAARLSSVPTPLEVAEAVCTIRREKLPDPKVLANAGSFFKNPLISDEQAAHLLCQYPDMPHFRQMKGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRHGLMKIASYIAAQVEARFGVRLSPEPRLIN 332
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: UPI001F0EE60B (UDP-N-acetylmuramate dehydrogenase n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0EE60B) HSP 1 Score: 420 bits (1079), Expect = 7.230e-146 Identity = 207/249 (83.13%), Postives = 223/249 (89.56%), Query Frame = 1
Query: 4 HVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLIN 750
HVGAGVNWH+ VMATAE GLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATG +YWLSAQEC FGYRDS+FKG+L +VVITQLVLRLSR PAP+L+YGDLAARLS TPTP EVA+AVCAIRREKLPDP VLANAGS+FKNPL+ + A+QLL+ +P MP FP K+ TKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM AS IA +VE FGVRLE EPRLIN
Sbjct: 86 HVGAGVNWHSLVMATAELGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGRSYWLSAQECAFGYRDSIFKGSLNGRVVITQLVLRLSRVPAPQLDYGDLAARLSHTPTPWEVAEAVCAIRREKLPDPEVLANAGSYFKNPLIKDAQAAQLLREYPAMPHFPLKDGHTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMNTASYIAAQVETRFGVRLESEPRLIN 334
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A0D5M4N4_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=9 Tax=Halomonas TaxID=2745 RepID=A0A0D5M4N4_9GAMM) HSP 1 Score: 420 bits (1079), Expect = 9.230e-146 Identity = 207/249 (83.13%), Postives = 222/249 (89.16%), Query Frame = 1
Query: 7 VGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
VGAGVNWHA VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATG YWLS QEC F YRDS+FKG L + VVITQL+LRLSR PAP+LNYGDLAARLS+TP+PLEVA+AVCAIRREKLPDP VLANAGSFFKNPLVS++ A+QL + +P MP FPQ QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDR GLM+IAS IA +V+ FGV LEPEPR INP
Sbjct: 94 VGAGVNWHALVMATAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGRCYWLSTQECAFAYRDSIFKGELADSVVITQLILRLSRMPAPQLNYGDLAARLSATPSPLEVAEAVCAIRREKLPDPEVLANAGSFFKNPLVSDEQAAQLSRQYPAMPHFPQAGGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRLGLMKIASYIAAQVKTRFGVLLEPEPRFINP 342
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A1J8P8H6_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=16 Tax=Halomonas TaxID=2745 RepID=A0A1J8P8H6_9GAMM) HSP 1 Score: 415 bits (1067), Expect = 5.010e-144 Identity = 204/251 (81.27%), Postives = 218/251 (86.85%), Query Frame = 1
Query: 1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
AHVGAGVNWHA VM TA RG+WGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATG WL AQ+C FGYR+S+FKG L VVITQLVLRLSR PAP+L YGDLA RL+ PTP VA+AVCAIRREKLPDP VLANAGSFFKNPLV+ A+QLL+ P MP FPQ+ QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM+ A+ IAD VEA FGVRLEPEPRL+NP
Sbjct: 85 AHVGAGVNWHALVMTTAARGMWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGRVEWLDAQQCAFGYRESIFKGELAGSVVITQLVLRLSRTPAPQLGYGDLAKRLTGAPTPFAVAEAVCAIRREKLPDPQVLANAGSFFKNPLVAGAQAAQLLQQFPAMPHFPQEGGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMKTANYIADLVEARFGVRLEPEPRLVNP 335
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A265DXD4_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Halomonas boliviensis LC1 TaxID=1072583 RepID=A0A265DXD4_9GAMM) HSP 1 Score: 414 bits (1065), Expect = 1.380e-143 Identity = 207/256 (80.86%), Postives = 224/256 (87.50%), Query Frame = 1
Query: 1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSS-----TPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
AHVGAGV+WHA VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTL AVQVMELATG WL+AQ+C FGYRDS+FKGAL VVITQLVLRLSR PAPRL YGDLAARL+S TPTPL VA+AVCAIRREKLPDP VLANAGSFFKNPLV++ A++LL +P MP FPQ+ QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM+ A+ IA +V+ FGVRLEPEPRL+NP
Sbjct: 90 AHVGAGVSWHALVMATAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLLAVQVMELATGRVEWLNAQQCAFGYRDSIFKGALAGSVVITQLVLRLSRTPAPRLGYGDLAARLASSSLTPTPTPLAVAEAVCAIRREKLPDPQVLANAGSFFKNPLVADAQAAELLHQYPAMPHFPQRGGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMKTANYIAAQVDTRFGVRLEPEPRLVNP 345
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A117KJH5_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A117KJH5_9GAMM) HSP 1 Score: 414 bits (1063), Expect = 2.510e-143 Identity = 205/251 (81.67%), Postives = 220/251 (87.65%), Query Frame = 1
Query: 1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
AHVGAGVNWHA VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELAD L AVQVMELATG WLSA+EC FGYRDS+FKG L VVITQLVLRLSR PAP+L YGD+AARL S PTPL VA+AVCAIRREKLPDPHVLANAGSFFKNPLV+++ +QLL+ +P MP FPQ +TKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDR GLM+ A+ IA +VEA FGV LEPEPRLINP
Sbjct: 92 AHVGAGVNWHALVMATAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADVLHAVQVMELATGRVDWLSAEECAFGYRDSLFKGELAGGVVITQLVLRLSRTPAPKLGYGDIAARLPSFPTPLAVAEAVCAIRREKLPDPHVLANAGSFFKNPLVNDEQVTQLLRQYPAMPHFPQGGGKTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRHGLMKTANYIAAQVEARFGVLLEPEPRLINP 342
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A511ULN4_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511ULN4_9GAMM) HSP 1 Score: 411 bits (1056), Expect = 2.530e-142 Identity = 203/250 (81.20%), Postives = 218/250 (87.20%), Query Frame = 1
Query: 4 HVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
+VGAGVNWH VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMEL +G YWLSA+ C FGYRDS+FKG L +VVITQ VLRLSR APRL YGDLAARL TPTPL VA+AVCAIRREKLPDP VLANAGSFFKNPLV+++ A+QLL+ +P MP FPQ TKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM+ A IA +VEA FG+RLEPEPRLINP
Sbjct: 89 YVGAGVNWHRLVMATAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELTSGRVYWLSAEACAFGYRDSIFKGELAGRVVITQWVLRLSRTSAPRLGYGDLAARLPGTPTPLGVAEAVCAIRREKLPDPQVLANAGSFFKNPLVTDEQAAQLLRQYPAMPHFPQGEGLTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMKTADYIAARVEARFGMRLEPEPRLINP 338 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14033.2391.1 >prot_E-siliculosus-1a_F_contig14033.2391.1 ID=prot_E-siliculosus-1a_F_contig14033.2391.1|Name=mRNA_E-siliculosus-1a_F_contig14033.2391.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=252bp AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELAback to top mRNA from alignment at E-siliculosus-1a_F_contig14033:433..1188- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14033.2391.1 ID=mRNA_E-siliculosus-1a_F_contig14033.2391.1|Name=mRNA_E-siliculosus-1a_F_contig14033.2391.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=756bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14033:433..1188- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14033:433..1188- >mRNA_E-siliculosus-1a_F_contig14033.2391.1 ID=mRNA_E-siliculosus-1a_F_contig14033.2391.1|Name=mRNA_E-siliculosus-1a_F_contig14033.2391.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14033:433..1188- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |