mRNA_E-siliculosus-1a_F_contig14033.2391.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14033.2391.1
Unique NamemRNA_E-siliculosus-1a_F_contig14033.2391.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A0F9W5A9_9ZZZZ (UDP-N-acetylmuramate dehydrogenase n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9W5A9_9ZZZZ)

HSP 1 Score: 435 bits (1119), Expect = 1.200e-151
Identity = 215/250 (86.00%), Postives = 225/250 (90.00%), Query Frame = 1
Query:    1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLIN 750
            AHVGAGVNWH  VMATAERGLWGIENLALIPG CGAAPVQNIGAYGVEL DTLQAV+VME ATG TYWLSA+EC FGYRDS FKG L NKVVITQLVLRLSR+P PRLNYGDLAARL   PTPLEVA+AVCAIRREKLPDP VLANAGSFFKNPLVS+Q  +QLLK++PTMP FPQ   QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDR GLM+ ASAIADKVEA FGVRLEPEPR+I 
Sbjct:  105 AHVGAGVNWHDLVMATAERGLWGIENLALIPGCCGAAPVQNIGAYGVELGDTLQAVKVMEFATGATYWLSAKECAFGYRDSAFKGPLANKVVITQLVLRLSRKPTPRLNYGDLAARLPQAPTPLEVAEAVCAIRREKLPDPQVLANAGSFFKNPLVSDQSVAQLLKIYPTMPHFPQGKGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRDGLMKTASAIADKVEARFGVRLEPEPRVIK 354          
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A0D6EAH0_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=4 Tax=Halomonas TaxID=2745 RepID=A0A0D6EAH0_9GAMM)

HSP 1 Score: 428 bits (1101), Expect = 3.480e-149
Identity = 212/253 (83.79%), Postives = 226/253 (89.33%), Query Frame = 1
Query:    1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSS--TPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
            AHVGAGVNWH  VM TA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATG   WLS+Q+C FGYRDS+FKG L   VVITQLVLRLSR PAPRL YGDLAARL++  TPTPL VA+AVCAIRREKLPDP VLANAGSFFKNPLVS+QWA+QLLK HP+MP FPQ+  QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM+ A  IA +VEA FG+RLEPEPRL+NP
Sbjct:   85 AHVGAGVNWHTLVMTTAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGQVDWLSSQQCAFGYRDSLFKGELAGSVVITQLVLRLSRTPAPRLGYGDLAARLANSLTPTPLAVAEAVCAIRREKLPDPQVLANAGSFFKNPLVSHQWAAQLLKEHPSMPHFPQEGGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMKTADYIAAQVEARFGLRLEPEPRLVNP 337          
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: UPI0018689F40 (UDP-N-acetylmuramate dehydrogenase n=1 Tax=Halomonas sp. FME64 TaxID=2742613 RepID=UPI0018689F40)

HSP 1 Score: 423 bits (1087), Expect = 4.380e-147
Identity = 208/250 (83.20%), Postives = 224/250 (89.60%), Query Frame = 1
Query:    4 HVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
            HVGAGVNWHA VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQ+VQVME+A+G   WLSAQEC FGYRDSVFKGA+ +KVVITQLVLRLSR+PAP+L YGDLAARLS  PTPLEVA+AVC IRREKLPDP VLANAGSFFKNPL+S+  A++LL+ +P MP FPQ   QTKLAAGWLIDQCGLKGMRDG FGVHQHQALVLVHFGGGDR GLM+IAS IA +VEA FGVRL PEPRLINP
Sbjct:   86 HVGAGVNWHALVMATARRGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQSVQVMEVASGQLAWLSAQECQFGYRDSVFKGAMADKVVITQLVLRLSRKPAPQLGYGDLAARLSPVPTPLEVAEAVCTIRREKLPDPKVLANAGSFFKNPLISDDQAARLLRQYPDMPHFPQMKGQTKLAAGWLIDQCGLKGMRDGVFGVHQHQALVLVHFGGGDRHGLMKIASYIAVQVEARFGVRLSPEPRLINP 335          
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A2A3XIA2_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A3XIA2_9GAMM)

HSP 1 Score: 420 bits (1080), Expect = 4.750e-146
Identity = 209/250 (83.60%), Postives = 224/250 (89.60%), Query Frame = 1
Query:    1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLIN 750
            AHVGAGVNWHA VMATA RGLWGIENLALIPG+CGAAPVQNIGAYGVELADTLQ+VQVMELA+G   WLSAQEC FGYRDSVFKGA+ +KVVITQLVLRLSR+PAP+L YGDLAARLSS PTPLEVA+AVC IRREKLPDP VLANAGSFFKNPL+S++ A+ LL  +P MP F Q   QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDR GLM+IAS IA +VEA FGVRL PEPRLIN
Sbjct:   83 AHVGAGVNWHALVMATARRGLWGIENLALIPGNCGAAPVQNIGAYGVELADTLQSVQVMELASGQLAWLSAQECQFGYRDSVFKGAMADKVVITQLVLRLSRKPAPQLGYGDLAARLSSVPTPLEVAEAVCTIRREKLPDPKVLANAGSFFKNPLISDEQAAHLLCQYPDMPHFRQMKGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRHGLMKIASYIAAQVEARFGVRLSPEPRLIN 332          
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: UPI001F0EE60B (UDP-N-acetylmuramate dehydrogenase n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0EE60B)

HSP 1 Score: 420 bits (1079), Expect = 7.230e-146
Identity = 207/249 (83.13%), Postives = 223/249 (89.56%), Query Frame = 1
Query:    4 HVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLIN 750
            HVGAGVNWH+ VMATAE GLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATG +YWLSAQEC FGYRDS+FKG+L  +VVITQLVLRLSR PAP+L+YGDLAARLS TPTP EVA+AVCAIRREKLPDP VLANAGS+FKNPL+ +  A+QLL+ +P MP FP K+  TKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM  AS IA +VE  FGVRLE EPRLIN
Sbjct:   86 HVGAGVNWHSLVMATAELGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGRSYWLSAQECAFGYRDSIFKGSLNGRVVITQLVLRLSRVPAPQLDYGDLAARLSHTPTPWEVAEAVCAIRREKLPDPEVLANAGSYFKNPLIKDAQAAQLLREYPAMPHFPLKDGHTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMNTASYIAAQVETRFGVRLESEPRLIN 334          
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A0D5M4N4_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=9 Tax=Halomonas TaxID=2745 RepID=A0A0D5M4N4_9GAMM)

HSP 1 Score: 420 bits (1079), Expect = 9.230e-146
Identity = 207/249 (83.13%), Postives = 222/249 (89.16%), Query Frame = 1
Query:    7 VGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
            VGAGVNWHA VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATG  YWLS QEC F YRDS+FKG L + VVITQL+LRLSR PAP+LNYGDLAARLS+TP+PLEVA+AVCAIRREKLPDP VLANAGSFFKNPLVS++ A+QL + +P MP FPQ   QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDR GLM+IAS IA +V+  FGV LEPEPR INP
Sbjct:   94 VGAGVNWHALVMATAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGRCYWLSTQECAFAYRDSIFKGELADSVVITQLILRLSRMPAPQLNYGDLAARLSATPSPLEVAEAVCAIRREKLPDPEVLANAGSFFKNPLVSDEQAAQLSRQYPAMPHFPQAGGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRLGLMKIASYIAAQVKTRFGVLLEPEPRFINP 342          
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A1J8P8H6_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=16 Tax=Halomonas TaxID=2745 RepID=A0A1J8P8H6_9GAMM)

HSP 1 Score: 415 bits (1067), Expect = 5.010e-144
Identity = 204/251 (81.27%), Postives = 218/251 (86.85%), Query Frame = 1
Query:    1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
            AHVGAGVNWHA VM TA RG+WGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATG   WL AQ+C FGYR+S+FKG L   VVITQLVLRLSR PAP+L YGDLA RL+  PTP  VA+AVCAIRREKLPDP VLANAGSFFKNPLV+   A+QLL+  P MP FPQ+  QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM+ A+ IAD VEA FGVRLEPEPRL+NP
Sbjct:   85 AHVGAGVNWHALVMTTAARGMWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGRVEWLDAQQCAFGYRESIFKGELAGSVVITQLVLRLSRTPAPQLGYGDLAKRLTGAPTPFAVAEAVCAIRREKLPDPQVLANAGSFFKNPLVAGAQAAQLLQQFPAMPHFPQEGGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMKTANYIADLVEARFGVRLEPEPRLVNP 335          
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A265DXD4_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Halomonas boliviensis LC1 TaxID=1072583 RepID=A0A265DXD4_9GAMM)

HSP 1 Score: 414 bits (1065), Expect = 1.380e-143
Identity = 207/256 (80.86%), Postives = 224/256 (87.50%), Query Frame = 1
Query:    1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSS-----TPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
            AHVGAGV+WHA VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTL AVQVMELATG   WL+AQ+C FGYRDS+FKGAL   VVITQLVLRLSR PAPRL YGDLAARL+S     TPTPL VA+AVCAIRREKLPDP VLANAGSFFKNPLV++  A++LL  +P MP FPQ+  QTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM+ A+ IA +V+  FGVRLEPEPRL+NP
Sbjct:   90 AHVGAGVSWHALVMATAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLLAVQVMELATGRVEWLNAQQCAFGYRDSIFKGALAGSVVITQLVLRLSRTPAPRLGYGDLAARLASSSLTPTPTPLAVAEAVCAIRREKLPDPQVLANAGSFFKNPLVADAQAAELLHQYPAMPHFPQRGGQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMKTANYIAAQVDTRFGVRLEPEPRLVNP 345          
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A117KJH5_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A117KJH5_9GAMM)

HSP 1 Score: 414 bits (1063), Expect = 2.510e-143
Identity = 205/251 (81.67%), Postives = 220/251 (87.65%), Query Frame = 1
Query:    1 AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
            AHVGAGVNWHA VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELAD L AVQVMELATG   WLSA+EC FGYRDS+FKG L   VVITQLVLRLSR PAP+L YGD+AARL S PTPL VA+AVCAIRREKLPDPHVLANAGSFFKNPLV+++  +QLL+ +P MP FPQ   +TKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDR GLM+ A+ IA +VEA FGV LEPEPRLINP
Sbjct:   92 AHVGAGVNWHALVMATAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADVLHAVQVMELATGRVDWLSAEECAFGYRDSLFKGELAGGVVITQLVLRLSRTPAPKLGYGDIAARLPSFPTPLAVAEAVCAIRREKLPDPHVLANAGSFFKNPLVNDEQVTQLLRQYPAMPHFPQGGGKTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRHGLMKTANYIAAQVEARFGVLLEPEPRLINP 342          
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Match: A0A511ULN4_9GAMM (UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511ULN4_9GAMM)

HSP 1 Score: 411 bits (1056), Expect = 2.530e-142
Identity = 203/250 (81.20%), Postives = 218/250 (87.20%), Query Frame = 1
Query:    4 HVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRLSRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSFFKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLINP 753
            +VGAGVNWH  VMATA RGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMEL +G  YWLSA+ C FGYRDS+FKG L  +VVITQ VLRLSR  APRL YGDLAARL  TPTPL VA+AVCAIRREKLPDP VLANAGSFFKNPLV+++ A+QLL+ +P MP FPQ    TKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLM+ A  IA +VEA FG+RLEPEPRLINP
Sbjct:   89 YVGAGVNWHRLVMATAARGLWGIENLALIPGSCGAAPVQNIGAYGVELADTLQAVQVMELTSGRVYWLSAEACAFGYRDSIFKGELAGRVVITQWVLRLSRTSAPRLGYGDLAARLPGTPTPLGVAEAVCAIRREKLPDPQVLANAGSFFKNPLVTDEQAAQLLRQYPAMPHFPQGEGLTKLAAGWLIDQCGLKGMRDGAFGVHQHQALVLVHFGGGDRQGLMKTADYIAARVEARFGMRLEPEPRLINP 338          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14033.2391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F9W5A9_9ZZZZ1.200e-15186.00UDP-N-acetylmuramate dehydrogenase n=1 Tax=marine ... [more]
A0A0D6EAH0_9GAMM3.480e-14983.79UDP-N-acetylenolpyruvoylglucosamine reductase n=4 ... [more]
UPI0018689F404.380e-14783.20UDP-N-acetylmuramate dehydrogenase n=1 Tax=Halomon... [more]
A0A2A3XIA2_9GAMM4.750e-14683.60UDP-N-acetylenolpyruvoylglucosamine reductase n=2 ... [more]
UPI001F0EE60B7.230e-14683.13UDP-N-acetylmuramate dehydrogenase n=1 Tax=Halomon... [more]
A0A0D5M4N4_9GAMM9.230e-14683.13UDP-N-acetylenolpyruvoylglucosamine reductase n=9 ... [more]
A0A1J8P8H6_9GAMM5.010e-14481.27UDP-N-acetylenolpyruvoylglucosamine reductase n=16... [more]
A0A265DXD4_9GAMM1.380e-14380.86UDP-N-acetylenolpyruvoylglucosamine reductase n=1 ... [more]
A0A117KJH5_9GAMM2.510e-14381.67UDP-N-acetylenolpyruvoylglucosamine reductase n=1 ... [more]
A0A511ULN4_9GAMM2.530e-14281.20UDP-N-acetylenolpyruvoylglucosamine reductase n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14033contigE-siliculosus-1a_F_contig14033:433..1188 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size756
Model size756
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko01011
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.M
EC1.3.1.98
EggNOG OGs1MXDH@1224,1RNXK@1236,1XHN4@135619,COG0812@1,COG0812@2
EggNOG free text desc.Cell wall formation
KEGG Pathwayko00520,ko00550,ko01100,map00520,map00550,map01100
KEGG ReactionR03191,R03192
KEGG koko:K00075
KEGG rclassRC02639
Preferred namemurB
Seed eggNOG ortholog1415755.JQLV01000001_gene2107
Seed ortholog evalue2.9e-118
Seed ortholog score431.4
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927919.3358078-CDS-E-siliculosus-1a_F_contig14033:432..11881622927919.3358078-CDS-E-siliculosus-1a_F_contig14033:432..1188Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14033 433..1188 -
1696318736.8844397-CDS-E-siliculosus-1a_F_contig14033:432..11881696318736.8844397-CDS-E-siliculosus-1a_F_contig14033:432..1188Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14033 433..1188 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14033.2391.1prot_E-siliculosus-1a_F_contig14033.2391.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14033 433..1188 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14033.2391.1

>prot_E-siliculosus-1a_F_contig14033.2391.1 ID=prot_E-siliculosus-1a_F_contig14033.2391.1|Name=mRNA_E-siliculosus-1a_F_contig14033.2391.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=252bp
AHVGAGVNWHAFVMATAERGLWGIENLALIPGSCGAAPVQNIGAYGVELA
DTLQAVQVMELATGHTYWLSAQECDFGYRDSVFKGALTNKVVITQLVLRL
SRQPAPRLNYGDLAARLSSTPTPLEVADAVCAIRREKLPDPHVLANAGSF
FKNPLVSNQWASQLLKVHPTMPSFPQKNEQTKLAAGWLIDQCGLKGMRDG
AFGVHQHQALVLVHFGGGDRQGLMEIASAIADKVEAHFGVRLEPEPRLIN
P*
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mRNA from alignment at E-siliculosus-1a_F_contig14033:433..1188-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14033.2391.1 ID=mRNA_E-siliculosus-1a_F_contig14033.2391.1|Name=mRNA_E-siliculosus-1a_F_contig14033.2391.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=756bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14033:433..1188- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCCCATGTAGGGGCTGGGGTTAATTGGCATGCCTTCGTCATGGCGACTGC CGAGCGTGGCCTGTGGGGAATTGAAAATTTGGCGTTAATTCCCGGCAGCT GTGGGGCGGCGCCGGTGCAGAATATTGGTGCTTATGGCGTTGAGCTTGCC GATACCCTGCAAGCAGTTCAGGTTATGGAGCTTGCCACGGGTCATACTTA TTGGTTGAGCGCCCAAGAGTGTGACTTTGGTTATCGTGATAGTGTGTTTA AAGGCGCCCTGACCAATAAGGTAGTGATTACCCAGCTAGTCTTGCGTTTG TCTCGGCAGCCAGCGCCTAGGCTGAATTATGGTGACCTTGCCGCGCGCTT ATCGAGCACGCCCACGCCACTAGAAGTAGCAGACGCGGTATGCGCTATTC GGCGTGAAAAATTACCCGACCCACACGTACTTGCCAATGCAGGTAGTTTT TTTAAAAACCCCCTCGTCAGCAATCAATGGGCGTCGCAGCTATTGAAAGT GCACCCGACCATGCCGAGTTTTCCACAAAAGAACGAGCAAACAAAGTTAG CGGCAGGTTGGCTAATTGATCAGTGTGGCTTAAAGGGCATGCGTGATGGC GCGTTTGGAGTGCATCAGCATCAAGCGCTAGTGTTGGTACATTTTGGTGG GGGAGACCGGCAGGGGCTCATGGAAATAGCAAGCGCAATCGCTGACAAGG TAGAAGCGCATTTTGGGGTACGGTTGGAGCCAGAGCCGCGCCTAATTAAC CCTTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14033:433..1188-

>mRNA_E-siliculosus-1a_F_contig14033.2391.1 ID=mRNA_E-siliculosus-1a_F_contig14033.2391.1|Name=mRNA_E-siliculosus-1a_F_contig14033.2391.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14033:433..1188- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCCCATGTAGGGGCTGGGGTTAATTGGCATGCCTTCGTCATGGCGACTGC
CGAGCGTGGCCTGTGGGGAATTGAAAATTTGGCGTTAATTCCCGGCAGCT
GTGGGGCGGCGCCGGTGCAGAATATTGGTGCTTATGGCGTTGAGCTTGCC
GATACCCTGCAAGCAGTTCAGGTTATGGAGCTTGCCACGGGTCATACTTA
TTGGTTGAGCGCCCAAGAGTGTGACTTTGGTTATCGTGATAGTGTGTTTA
AAGGCGCCCTGACCAATAAGGTAGTGATTACCCAGCTAGTCTTGCGTTTG
TCTCGGCAGCCAGCGCCTAGGCTGAATTATGGTGACCTTGCCGCGCGCTT
ATCGAGCACGCCCACGCCACTAGAAGTAGCAGACGCGGTATGCGCTATTC
GGCGTGAAAAATTACCCGACCCACACGTACTTGCCAATGCAGGTAGTTTT
TTTAAAAACCCCCTCGTCAGCAATCAATGGGCGTCGCAGCTATTGAAAGT
GCACCCGACCATGCCGAGTTTTCCACAAAAGAACGAGCAAACAAAGTTAG
CGGCAGGTTGGCTAATTGATCAGTGTGGCTTAAAGGGCATGCGTGATGGC
GCGTTTGGAGTGCATCAGCATCAAGCGCTAGTGTTGGTACATTTTGGTGG
GGGAGACCGGCAGGGGCTCATGGAAATAGCAAGCGCAATCGCTGACAAGG
TAGAAGCGCATTTTGGGGTACGGTTGGAGCCAGAGCCGCGCCTAATTAAC
CCTTAAGCCCATGTAGGGGCTGGGGTTAATTGGCATGCCTTCGTCATGGC
GACTGCCGAGCGTGGCCTGTGGGGAATTGAAAATTTGGCGTTAATTCCCG
GCAGCTGTGGGGCGGCGCCGGTGCAGAATATTGGTGCTTATGGCGTTGAG
CTTGCCGATACCCTGCAAGCAGTTCAGGTTATGGAGCTTGCCACGGGTCA
TACTTATTGGTTGAGCGCCCAAGAGTGTGACTTTGGTTATCGTGATAGTG
TGTTTAAAGGCGCCCTGACCAATAAGGTAGTGATTACCCAGCTAGTCTTG
CGTTTGTCTCGGCAGCCAGCGCCTAGGCTGAATTATGGTGACCTTGCCGC
GCGCTTATCGAGCACGCCCACGCCACTAGAAGTAGCAGACGCGGTATGCG
CTATTCGGCGTGAAAAATTACCCGACCCACACGTACTTGCCAATGCAGGT
AGTTTTTTTAAAAACCCCCTCGTCAGCAATCAATGGGCGTCGCAGCTATT
GAAAGTGCACCCGACCATGCCGAGTTTTCCACAAAAGAACGAGCAAACAA
AGTTAGCGGCAGGTTGGCTAATTGATCAGTGTGGCTTAAAGGGCATGCGT
GATGGCGCGTTTGGAGTGCATCAGCATCAAGCGCTAGTGTTGGTACATTT
TGGTGGGGGAGACCGGCAGGGGCTCATGGAAATAGCAAGCGCAATCGCTG
ACAAGGTAGAAGCGCATTTTGGGGTACGGTTGGAGCCAGAGCCGCGCCTA
ATTAACCCTTAA
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