mRNA_E-siliculosus-1a_F_contig14029.2385.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14029.2385.1
Unique NamemRNA_E-siliculosus-1a_F_contig14029.2385.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: A0A1A0FMR0_9GAMM (6-carboxyhexanoate--CoA ligase n=9 Tax=Halomonas TaxID=2745 RepID=A0A1A0FMR0_9GAMM)

HSP 1 Score: 701 bits (1809), Expect = 9.190e-249
Identity = 372/396 (93.94%), Postives = 380/396 (95.96%), Query Frame = 1
Query:    1 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFF ELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDH TA KLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILL+S+SYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIG+PL  GG   +V LPDL+ LP GSIDEAAAKQLFA+ GISVP SRVVHSREEAERAA ELDA VVLK+MDASLLHKSDIGGVALHLN+DTIGQRFDQMVSDVEAHVARRPDTFLVE MVAGGHELILGANRDALGTAILLGAGGVTAELFK
Sbjct:  209 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFRELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHATAEKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLESDSYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGRPLFGGGGSPQVTLPDLTALPKGSIDEAAAKQLFAQAGISVPPSRVVHSREEAERAASELDAPVVLKIMDASLLHKSDIGGVALHLNSDTIGQRFDQMVSDVEAHVARRPDTFLVETMVAGGHELILGANRDALGTAILLGAGGVTAELFK 604          
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: A0A3T1DZZ4_9GAMM (ATP-grasp domain-containing protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DZZ4_9GAMM)

HSP 1 Score: 644 bits (1660), Expect = 8.320e-230
Identity = 341/364 (93.68%), Postives = 351/364 (96.43%), Query Frame = 1
Query:   97 VFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            +FKIGRSEAGASAASSHTGALAGEDRVYDAFF ELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDH TA KLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILL+S+SYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAP TLQRLNRASIPGFSSPESCSAVLEALHFIG+PL +GGE ++V LPDL+ LP GSIDEAAAKQLFA+ GISVP SRVVHSREEAERAARELDA VVLKVMDASLLHKSDIGGVALHLNA+TIGQRFDQMVSDVEAHVA RPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK
Sbjct:    1 MFKIGRSEAGASAASSHTGALAGEDRVYDAFFCELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHATAEKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLESDSYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPSTLQRLNRASIPGFSSPESCSAVLEALHFIGRPLLSGGESAQVVLPDLTALPKGSIDEAAAKQLFAQAGISVPPSRVVHSREEAERAARELDAPVVLKVMDASLLHKSDIGGVALHLNAETIGQRFDQMVSDVEAHVAHRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 364          
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: A0A2A2ER62_9GAMM (6-carboxyhexanoate--CoA ligase n=4 Tax=Halomonas TaxID=2745 RepID=A0A2A2ER62_9GAMM)

HSP 1 Score: 642 bits (1655), Expect = 2.240e-225
Identity = 339/396 (85.61%), Postives = 362/396 (91.41%), Query Frame = 1
Query:    1 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            TKVIALYLES+RHPARFREVA+RAR AGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFF ELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLG+NGF+TP PD  TA KLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILL+S+SYDALIVIIGSSGLAMPDLVVGAISDSL  ++KP+LAYVSPYAP TLQRLNRA+IPGFSSPESCSAVLEAL+  GQPL  G     V LPDLS LP G+IDEAAAKQLF++ GI+VP+SRVV +REEAERAA E+ A VVLKV+DA+LLHKSDIGGVALHLNADTIG R +QM   VE+HV RR D +LVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK
Sbjct:  209 TKVIALYLESIRHPARFREVAIRAREAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFRELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGINGFETPPPDQATAEKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLESDSYDALIVIIGSSGLAMPDLVVGAISDSLGASDKPVLAYVSPYAPNTLQRLNRAAIPGFSSPESCSAVLEALYLTGQPLSAGASQPSVQLPDLSGLPQGAIDEAAAKQLFSQAGIAVPASRVVRTREEAERAASEVGAPVVLKVLDANLLHKSDIGGVALHLNADTIGDRLEQMAHQVESHVGRRADAYLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 604          
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: UPI001C2D03F1 (acetate--CoA ligase family protein n=1 Tax=Marinobacterium ramblicola TaxID=2849041 RepID=UPI001C2D03F1)

HSP 1 Score: 625 bits (1613), Expect = 5.250e-219
Identity = 334/396 (84.34%), Postives = 357/396 (90.15%), Query Frame = 1
Query:    1 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            TKVIALYLES+R+P RFREVALRAR AGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFF ELGVIR NTFDEFLD+PAVLVAGR+L GRRVA+LTSTGGAGTLIADSLG+N FDTPAPD  TA KLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIR LL+SESYDAL+VIIGSSGLAMPDLVVGAI DSL TN+KP+LAYVSPYAP TL+RLNRA+IPGFSSPESCSAVLEALHF GQPL  G  ++   LPDLS L +GS+DEAAAK LF+E GISVP SRVV SR EAE+AA EL A VVLKV+DA+LLHKSDIGGVALHLN  TIG+RFD+MV DV +H  RRPDTFLVE MV GGHELILGANRDALGTAILLGAGGVTAELFK
Sbjct:  209 TKVIALYLESIRNPQRFREVALRAREAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFRELGVIRANTFDEFLDIPAVLVAGRKLPGRRVAILTSTGGAGTLIADSLGMNDFDTPAPDAVTAEKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRTLLESESYDALVVIIGSSGLAMPDLVVGAIQDSLDTNDKPVLAYVSPYAPDTLKRLNRAAIPGFSSPESCSAVLEALHFTGQPLLAGNTVAAGQLPDLSAL-SGSVDEAAAKALFSEAGISVPDSRVVKSRAEAEQAASELGAPVVLKVLDANLLHKSDIGGVALHLNDQTIGERFDRMVDDVASHTDRRPDTFLVEKMVGGGHELILGANRDALGTAILLGAGGVTAELFK 603          
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: A0A1H9J0L0_9GAMM (CoA binding domain-containing protein n=1 Tax=Amphritea atlantica TaxID=355243 RepID=A0A1H9J0L0_9GAMM)

HSP 1 Score: 620 bits (1599), Expect = 6.300e-217
Identity = 327/397 (82.37%), Postives = 357/397 (89.92%), Query Frame = 1
Query:    1 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGEL-SRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            TKVIALYLES+R+P RFREVA+RAR AGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFF ELGVIRVNTFDEFLD+PAVLVAGR+LAGRRVAVLTSTGGAGTLIADSLGV  FDTP PD DTA KLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILL+S+SYDAL+VIIGSSGLAMPDLVVGAI+DSL  N+KP+LAYVSPYAP TL+RLNRA IPGFSSPESCSAVLEALHF GQPL +     + +++PDL  LP GS+DEA AK LF E GI VP SR+V SREEA +AAREL   VVLK++DASLLHKSDIGGVAL LNA+ IG RF+QM+S+V++H+ R PD FLVEAMVAGGHELILGANRDALGTAILLGAGGVTAEL+K
Sbjct:  209 TKVIALYLESIRNPQRFREVAIRAREAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFRELGVIRVNTFDEFLDIPAVLVAGRKLAGRRVAVLTSTGGAGTLIADSLGVTAFDTPPPDVDTAEKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLESDSYDALVVIIGSSGLAMPDLVVGAITDSLDVNDKPVLAYVSPYAPDTLKRLNRAKIPGFSSPESCSAVLEALHFTGQPLLSASAAGATISIPDLDTLPGGSMDEATAKALFREAGIQVPESRIVTSREEAVQAARELGEPVVLKILDASLLHKSDIGGVALFLNAENIGDRFEQMISEVQSHIGRCPDQFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELYK 605          
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: A0A7Y6Z5V6_9GAMM (Acetate--CoA ligase family protein n=2 Tax=Oceanospirillaceae TaxID=135620 RepID=A0A7Y6Z5V6_9GAMM)

HSP 1 Score: 617 bits (1592), Expect = 9.150e-216
Identity = 329/396 (83.08%), Postives = 353/396 (89.14%), Query Frame = 1
Query:    1 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            TKVIALYLES+R+P RFREVA+RAR AGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFF ELGVIR NTFDEFLD+PAVLVAGR+LAGRRVA+LTSTGGAGTLIADSLG+N FDTPAPD  TA KLRALQGDTPTALDRNPIDVTLAGLQP+LLRQAIR LL S+SYDAL+VIIGSSGLAMPDLVVGAI D L TN+KP+LAYVSPYAP TL+RLN A IPGFSSPESCSAVLEAL F GQPL +G  +  VALPD++ L  GSIDEA+AK LF++ GI VP+SRVV SREEA +AAREL   VVLKV+DA LLHKSDIGGVALHLNADTIG RF QM+ DV  HV  RPD FLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK
Sbjct:  209 TKVIALYLESIRNPQRFREVAIRARDAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFRELGVIRANTFDEFLDIPAVLVAGRKLAGRRVAILTSTGGAGTLIADSLGMNDFDTPAPDAGTAEKLRALQGDTPTALDRNPIDVTLAGLQPELLRQAIRTLLASDSYDALVVIIGSSGLAMPDLVVGAIQDCLDTNDKPVLAYVSPYAPDTLKRLNSAGIPGFSSPESCSAVLEALFFTGQPLLSGQAVPSVALPDMTGLGEGSIDEASAKALFSQAGIPVPASRVVTSREEAVQAARELGQPVVLKVLDADLLHKSDIGGVALHLNADTIGARFGQMIEDVARHVGHRPDRFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 604          
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: A0A1H8LAY3_9PSED (CoA binding domain-containing protein n=3 Tax=Pseudomonas TaxID=286 RepID=A0A1H8LAY3_9PSED)

HSP 1 Score: 608 bits (1568), Expect = 4.100e-212
Identity = 324/396 (81.82%), Postives = 348/396 (87.88%), Query Frame = 1
Query:    1 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            TKVIALYLES+R+P RFREVALRAR AGKPLVVFKIGRSEAGA+AASSHTGALAGEDRVYDAFF ELGVIR NTFDEFLD+PAVLV GR LAGRRVA+LTSTGGAGTLIADSLG+N FDTP PD DTA KLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIR LL+S+SYDAL+VIIGSSGLAMPDLVV AI D L TNNKP+LAYVSPYAP TL+RLN A IPGF SPESCSAVLEAL+F  QPL +        LPD++ L  GSIDEAAAK LF++VGISVP SRVV SRE+A  AAREL   VVLKV+DA+LLHKSDIGGVALH  ADTIG RFDQM++DV +HV  RPD FL+EAMVAGGHELILGANRDALGTAILLGAGGVTAELFK
Sbjct:  210 TKVIALYLESIRNPQRFREVALRAREAGKPLVVFKIGRSEAGATAASSHTGALAGEDRVYDAFFRELGVIRANTFDEFLDIPAVLVTGRPLAGRRVAILTSTGGAGTLIADSLGMNHFDTPKPDADTAEKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRTLLKSDSYDALVVIIGSSGLAMPDLVVCAIQDCLDTNNKPVLAYVSPYAPDTLKRLNSAGIPGFCSPESCSAVLEALYFRAQPLPSTHAAPTAQLPDMTALAEGSIDEAAAKALFSQVGISVPESRVVTSREQAVHAARELSQPVVLKVLDANLLHKSDIGGVALHQTADTIGARFDQMITDVGSHVGYRPDRFLIEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 605          
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: A0A5C1NGI1_9GAMM (Acetate--CoA ligase family protein n=1 Tax=Halomonas sp. Y2R2 TaxID=2562282 RepID=A0A5C1NGI1_9GAMM)

HSP 1 Score: 601 bits (1549), Expect = 3.010e-209
Identity = 318/396 (80.30%), Postives = 349/396 (88.13%), Query Frame = 1
Query:    1 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            T+VIALYLESVR+P RFRE A+RAR AGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFF ELGVIR NTFDEFLD+PAVLV+GR+L GRRVA+LTSTGGAGTLIADSLG+N FDTPAPD +TA +LRALQG+TPTALDRNPIDVTLAGLQP+LLRQAIR LL S+SYDALIV+IGSSGLAMPDLVVGAI D L  N+KP+LAYVSP+AP TL+RLNRA IPGFSSPESCSAVLEALHF GQPL  G     V LPDL+ L  G+IDEA+AK LF+  GI VP+SRVV  R+EA +AAREL   VVLKV+DA+LLHKSDIGGVALH NADTIG RF+QM+ DV + + RRPD FLVEAMV GGHELILGANRDALGTAILLGAGGVTAELFK
Sbjct:  209 TRVIALYLESVRNPKRFREAAIRARDAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFRELGVIRANTFDEFLDIPAVLVSGRKLTGRRVAILTSTGGAGTLIADSLGMNHFDTPAPDANTASQLRALQGNTPTALDRNPIDVTLAGLQPELLRQAIRTLLASDSYDALIVVIGSSGLAMPDLVVGAIQDCLDINDKPVLAYVSPHAPDTLKRLNRAGIPGFSSPESCSAVLEALHFTGQPLPGGRPTPSVELPDLTGLTGGAIDEASAKSLFSRTGIQVPASRVVTCRDEAVQAARELGQPVVLKVLDANLLHKSDIGGVALHQNADTIGARFEQMIQDVGSRIDRRPDRFLVEAMVTGGHELILGANRDALGTAILLGAGGVTAELFK 604          
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: A0A379IU97_PSEME (CoA-binding domain-containing protein n=6 Tax=Pseudomonas TaxID=286 RepID=A0A379IU97_PSEME)

HSP 1 Score: 597 bits (1540), Expect = 6.720e-208
Identity = 321/396 (81.06%), Postives = 345/396 (87.12%), Query Frame = 1
Query:    1 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            TKVIALYLESVR+P RFREVALRARAAGKPLVVFKIGRSEAGA+AASSHTGALAGEDRVYDAFF ELGVIR NTFDEFLD+PAVLVAGR+LAGRRVA+LTSTGGAGTLIADSLG+N FDTPAPD  TA KLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIR LL S+SYDAL+VIIGSSGLAMPDLVV AI D L TN+KP+LAYVSPYAP TL+RLN A IPGFSSPESCSAVL AL  I QPL       R+ LP +     GS+DEAAAK LF++VG+ VP SRVV SREEA +AAREL+  VVLKV+DA LLHKSDIGGVALH  ADTIG RFD+MV++V  HV  RPD FLVEAMVAGGHELILGANRDALGT ILLGAGGVTAEL+K
Sbjct:  209 TKVIALYLESVRNPQRFREVALRARAAGKPLVVFKIGRSEAGATAASSHTGALAGEDRVYDAFFRELGVIRANTFDEFLDIPAVLVAGRRLAGRRVAILTSTGGAGTLIADSLGMNHFDTPAPDAATAEKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRTLLASDSYDALVVIIGSSGLAMPDLVVNAIQDCLDTNDKPVLAYVSPYAPDTLKRLNSAGIPGFSSPESCSAVLGALDLIAQPLPNLAAAPRIPLPAMFEQAEGSLDEAAAKALFSQVGLRVPQSRVVASREEAVQAARELEHPVVLKVLDAKLLHKSDIGGVALHQTADTIGARFDKMVTEVTGHVGYRPDRFLVEAMVAGGHELILGANRDALGTTILLGAGGVTAELYK 604          
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Match: UPI000DA11CE2 (acetate--CoA ligase family protein n=3 Tax=Salinicola TaxID=404432 RepID=UPI000DA11CE2)

HSP 1 Score: 525 bits (1352), Expect = 1.720e-179
Identity = 281/396 (70.96%), Postives = 323/396 (81.57%), Query Frame = 1
Query:    1 TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHTGALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLTSTGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVTLAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLATNNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHTGGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAERAARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAHVARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK 1188
            T+VIALYLES+RHPARFR  A RARAAGKP+VVFKIGRSEAGA +ASSHTGALAGEDRVYDAFF +LG++R +TFDE LD+PAVL AGR++  RRVA+LTSTGGAGTLIADSLG+ GF+ P PD  TA +LR LQGDTP  LDRNPIDVTLAGLQPDLLRQAIR LL+SE+YDAL+VIIGSSGLAMPDLVVGAI  +LA ++KP+LAYVSP+AP TL+RLNRA IPGFSSPESCSA LEA+H     + T    + V  P ++  P GS+DEA+AKQLF   GI+VP+SR V + +EA  AA E+   VVLKV+D +LLHKSDIGGVAL+L ADTI +R  +M   V  H    P  FLVEAMV GG ELILGANRDALGT+ILLGAGGVTAELFK
Sbjct:  209 TRVIALYLESIRHPARFRAAAERARAAGKPVVVFKIGRSEAGARSASSHTGALAGEDRVYDAFFRDLGIVRADTFDELLDIPAVLTAGRRMQKRRVAILTSTGGAGTLIADSLGMKGFEAPVPDEATAARLRELQGDTPAELDRNPIDVTLAGLQPDLLRQAIRTLLESETYDALVVIIGSSGLAMPDLVVGAIQANLALSDKPVLAYVSPHAPETLKRLNRAGIPGFSSPESCSAALEAIHVTSTRV-TSAPAAAVT-PAMADTPQGSLDEASAKQLFRTHGIAVPASRTVTTPQEAAHAAAEIATPVVLKVLDGTLLHKSDIGGVALNLGADTIAERLTRMQQAVAEHTGHTPQRFLVEAMVPGGFELILGANRDALGTSILLGAGGVTAELFK 602          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14029.2385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1A0FMR0_9GAMM9.190e-24993.946-carboxyhexanoate--CoA ligase n=9 Tax=Halomonas T... [more]
A0A3T1DZZ4_9GAMM8.320e-23093.68ATP-grasp domain-containing protein n=1 Tax=Halomo... [more]
A0A2A2ER62_9GAMM2.240e-22585.616-carboxyhexanoate--CoA ligase n=4 Tax=Halomonas T... [more]
UPI001C2D03F15.250e-21984.34acetate--CoA ligase family protein n=1 Tax=Marinob... [more]
A0A1H9J0L0_9GAMM6.300e-21782.37CoA binding domain-containing protein n=1 Tax=Amph... [more]
A0A7Y6Z5V6_9GAMM9.150e-21683.08Acetate--CoA ligase family protein n=2 Tax=Oceanos... [more]
A0A1H8LAY3_9PSED4.100e-21281.82CoA binding domain-containing protein n=3 Tax=Pseu... [more]
A0A5C1NGI1_9GAMM3.010e-20980.30Acetate--CoA ligase family protein n=1 Tax=Halomon... [more]
A0A379IU97_PSEME6.720e-20881.06CoA-binding domain-containing protein n=6 Tax=Pseu... [more]
UPI000DA11CE21.720e-17970.96acetate--CoA ligase family protein n=3 Tax=Salinic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14029contigE-siliculosus-1a_F_contig14029:2..1189 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1188
Model size1188
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelPseudomonas aeruginosa group
COG Functional cat.C
EggNOG OGs1MW98@1224,1RPXX@1236,1YEUR@136841,COG0045@1,COG0045@2,COG1042@1,COG1042@2
EggNOG free text desc.CoA binding domain
Seed eggNOG ortholog1001585.MDS_2753
Seed ortholog evalue4.3e-169
Seed ortholog score600.9
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927918.7846088-CDS-E-siliculosus-1a_F_contig14029:1..11891622927918.7846088-CDS-E-siliculosus-1a_F_contig14029:1..1189Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14029 2..1189 +
1696318736.6593564-CDS-E-siliculosus-1a_F_contig14029:1..11891696318736.6593564-CDS-E-siliculosus-1a_F_contig14029:1..1189Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14029 2..1189 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14029.2385.1prot_E-siliculosus-1a_F_contig14029.2385.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14029 2..1189 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14029.2385.1

>prot_E-siliculosus-1a_F_contig14029.2385.1 ID=prot_E-siliculosus-1a_F_contig14029.2385.1|Name=mRNA_E-siliculosus-1a_F_contig14029.2385.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=396bp
TKVIALYLESVRHPARFREVALRARAAGKPLVVFKIGRSEAGASAASSHT
GALAGEDRVYDAFFHELGVIRVNTFDEFLDVPAVLVAGRQLAGRRVAVLT
STGGAGTLIADSLGVNGFDTPAPDHDTAGKLRALQGDTPTALDRNPIDVT
LAGLQPDLLRQAIRILLQSESYDALIVIIGSSGLAMPDLVVGAISDSLAT
NNKPLLAYVSPYAPGTLQRLNRASIPGFSSPESCSAVLEALHFIGQPLHT
GGELSRVALPDLSVLPNGSIDEAAAKQLFAEVGISVPSSRVVHSREEAER
AARELDASVVLKVMDASLLHKSDIGGVALHLNADTIGQRFDQMVSDVEAH
VARRPDTFLVEAMVAGGHELILGANRDALGTAILLGAGGVTAELFK
back to top

mRNA from alignment at E-siliculosus-1a_F_contig14029:2..1189+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14029.2385.1 ID=mRNA_E-siliculosus-1a_F_contig14029.2385.1|Name=mRNA_E-siliculosus-1a_F_contig14029.2385.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1188bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14029:2..1189+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACCAAGGTCATTGCGCTTTATCTGGAAAGTGTTCGTCACCCTGCGCGTTT CCGTGAAGTTGCCCTGCGCGCTCGGGCTGCCGGCAAGCCGCTGGTGGTGT TCAAAATTGGCCGTTCAGAAGCAGGCGCAAGCGCGGCCAGCTCCCACACC GGTGCCCTGGCTGGGGAAGACCGCGTTTATGATGCTTTCTTCCATGAGTT GGGGGTTATTCGCGTCAATACCTTTGACGAGTTTTTGGACGTACCTGCAG TGCTGGTCGCTGGCCGCCAACTGGCGGGACGTCGCGTTGCCGTACTTACC TCGACAGGGGGCGCTGGCACATTGATTGCCGATAGTTTGGGCGTCAACGG CTTTGATACGCCTGCGCCTGATCATGATACAGCAGGAAAACTGCGCGCCC TGCAGGGCGATACACCGACCGCACTAGACCGTAACCCCATTGATGTGACC CTGGCGGGGCTGCAGCCCGACTTGCTGCGCCAAGCCATCCGTATTCTGCT GCAAAGCGAAAGCTACGATGCCTTGATCGTCATTATTGGCTCATCAGGAT TGGCGATGCCTGACCTTGTAGTAGGGGCCATCAGCGACAGTTTGGCGACC AACAATAAGCCACTACTGGCTTATGTTAGCCCCTACGCTCCAGGCACGCT GCAGCGCTTGAATCGCGCCTCGATCCCAGGCTTTAGCTCACCGGAAAGCT GTAGTGCGGTGCTGGAAGCGCTGCACTTTATTGGCCAGCCATTGCATACA GGTGGTGAGTTGTCACGGGTAGCGTTACCCGATTTAAGTGTGTTGCCTAA TGGTTCAATTGATGAAGCCGCCGCCAAGCAGCTGTTCGCTGAGGTAGGTA TTAGCGTACCGTCTAGCCGGGTGGTTCACTCCCGTGAAGAGGCGGAGCGC GCTGCCAGAGAGTTGGACGCCTCCGTAGTGCTCAAGGTGATGGATGCCAG CTTGCTGCACAAAAGTGACATTGGTGGTGTTGCGCTGCATTTAAATGCCG ACACCATAGGTCAGCGGTTTGATCAAATGGTGAGTGACGTTGAAGCGCAC GTTGCGCGCCGCCCTGATACCTTCCTTGTGGAAGCGATGGTGGCGGGCGG GCACGAGCTGATCCTCGGTGCTAACCGTGATGCGCTCGGTACGGCGATTT TACTAGGCGCAGGTGGTGTTACAGCGGAGCTGTTTAAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14029:2..1189+

>mRNA_E-siliculosus-1a_F_contig14029.2385.1 ID=mRNA_E-siliculosus-1a_F_contig14029.2385.1|Name=mRNA_E-siliculosus-1a_F_contig14029.2385.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2376bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14029:2..1189+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACCAAGGTCATTGCGCTTTATCTGGAAAGTGTTCGTCACCCTGCGCGTTT
CCGTGAAGTTGCCCTGCGCGCTCGGGCTGCCGGCAAGCCGCTGGTGGTGT
TCAAAATTGGCCGTTCAGAAGCAGGCGCAAGCGCGGCCAGCTCCCACACC
GGTGCCCTGGCTGGGGAAGACCGCGTTTATGATGCTTTCTTCCATGAGTT
GGGGGTTATTCGCGTCAATACCTTTGACGAGTTTTTGGACGTACCTGCAG
TGCTGGTCGCTGGCCGCCAACTGGCGGGACGTCGCGTTGCCGTACTTACC
TCGACAGGGGGCGCTGGCACATTGATTGCCGATAGTTTGGGCGTCAACGG
CTTTGATACGCCTGCGCCTGATCATGATACAGCAGGAAAACTGCGCGCCC
TGCAGGGCGATACACCGACCGCACTAGACCGTAACCCCATTGATGTGACC
CTGGCGGGGCTGCAGCCCGACTTGCTGCGCCAAGCCATCCGTATTCTGCT
GCAAAGCGAAAGCTACGATGCCTTGATCGTCATTATTGGCTCATCAGGAT
TGGCGATGCCTGACCTTGTAGTAGGGGCCATCAGCGACAGTTTGGCGACC
AACAATAAGCCACTACTGGCTTATGTTAGCCCCTACGCTCCAGGCACGCT
GCAGCGCTTGAATCGCGCCTCGATCCCAGGCTTTAGCTCACCGGAAAGCT
GTAGTGCGGTGCTGGAAGCGCTGCACTTTATTGGCCAGCCATTGCATACA
GGTGGTGAGTTGTCACGGGTAGCGTTACCCGATTTAAGTGTGTTGCCTAA
TGGTTCAATTGATGAAGCCGCCGCCAAGCAGCTGTTCGCTGAGGTAGGTA
TTAGCGTACCGTCTAGCCGGGTGGTTCACTCCCGTGAAGAGGCGGAGCGC
GCTGCCAGAGAGTTGGACGCCTCCGTAGTGCTCAAGGTGATGGATGCCAG
CTTGCTGCACAAAAGTGACATTGGTGGTGTTGCGCTGCATTTAAATGCCG
ACACCATAGGTCAGCGGTTTGATCAAATGGTGAGTGACGTTGAAGCGCAC
GTTGCGCGCCGCCCTGATACCTTCCTTGTGGAAGCGATGGTGGCGGGCGG
GCACGAGCTGATCCTCGGTGCTAACCGTGATGCGCTCGGTACGGCGATTT
TACTAGGCGCAGGTGGTGTTACAGCGGAGCTGTTTAAGACCAAGGTCATT
GCGCTTTATCTGGAAAGTGTTCGTCACCCTGCGCGTTTCCGTGAAGTTGC
CCTGCGCGCTCGGGCTGCCGGCAAGCCGCTGGTGGTGTTCAAAATTGGCC
GTTCAGAAGCAGGCGCAAGCGCGGCCAGCTCCCACACCGGTGCCCTGGCT
GGGGAAGACCGCGTTTATGATGCTTTCTTCCATGAGTTGGGGGTTATTCG
CGTCAATACCTTTGACGAGTTTTTGGACGTACCTGCAGTGCTGGTCGCTG
GCCGCCAACTGGCGGGACGTCGCGTTGCCGTACTTACCTCGACAGGGGGC
GCTGGCACATTGATTGCCGATAGTTTGGGCGTCAACGGCTTTGATACGCC
TGCGCCTGATCATGATACAGCAGGAAAACTGCGCGCCCTGCAGGGCGATA
CACCGACCGCACTAGACCGTAACCCCATTGATGTGACCCTGGCGGGGCTG
CAGCCCGACTTGCTGCGCCAAGCCATCCGTATTCTGCTGCAAAGCGAAAG
CTACGATGCCTTGATCGTCATTATTGGCTCATCAGGATTGGCGATGCCTG
ACCTTGTAGTAGGGGCCATCAGCGACAGTTTGGCGACCAACAATAAGCCA
CTACTGGCTTATGTTAGCCCCTACGCTCCAGGCACGCTGCAGCGCTTGAA
TCGCGCCTCGATCCCAGGCTTTAGCTCACCGGAAAGCTGTAGTGCGGTGC
TGGAAGCGCTGCACTTTATTGGCCAGCCATTGCATACAGGTGGTGAGTTG
TCACGGGTAGCGTTACCCGATTTAAGTGTGTTGCCTAATGGTTCAATTGA
TGAAGCCGCCGCCAAGCAGCTGTTCGCTGAGGTAGGTATTAGCGTACCGT
CTAGCCGGGTGGTTCACTCCCGTGAAGAGGCGGAGCGCGCTGCCAGAGAG
TTGGACGCCTCCGTAGTGCTCAAGGTGATGGATGCCAGCTTGCTGCACAA
AAGTGACATTGGTGGTGTTGCGCTGCATTTAAATGCCGACACCATAGGTC
AGCGGTTTGATCAAATGGTGAGTGACGTTGAAGCGCACGTTGCGCGCCGC
CCTGATACCTTCCTTGTGGAAGCGATGGTGGCGGGCGGGCACGAGCTGAT
CCTCGGTGCTAACCGTGATGCGCTCGGTACGGCGATTTTACTAGGCGCAG
GTGGTGTTACAGCGGAGCTGTTTAAG
back to top