mRNA_E-siliculosus-1a_F_contig1401.2377.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: D7FZT7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT7_ECTSI) HSP 1 Score: 1015 bits (2624), Expect = 0.000e+0 Identity = 577/614 (93.97%), Postives = 588/614 (95.77%), Query Frame = 1
Query: 1 MLQPNSQGHGSYFEAFKRRSNVTLDAAQRDKMLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEEQGREQGRINDAMEIRLESLEQQIDAVSAAVDDAAMAQPNNLNVRTCMGDGGIPSARHPPVYPPGLHEINTAGLSEWMTGVDKQLEDLRNLVSAQLTTGSXXXXXXXXXXXGSKATTAVGSSPQSEDDAEEATAVPETKTAAVATARDECARIEERVRRLEEAMGETSPGAGHSGGDSLLLSPATTVVDQRDRGRRLERCAELAREGLTRSRSASRSPVRRSPSAPPPATEIAAAPLASDAGTRTVEDDNDALLGAEEDGTAVARRASEVAEEALKAGREAIERSERTESLAKTIAVRSFKLAKERHEEVTTVLDRLGEDIRRKGDSTVRRRPRSAGESRGDGVDSARPTGASGTALSAGATGGRRGRCRRAVSATPEERRRSAKARRGDARGFGRQALHDAEGATEELAAAQGPGGGETGTHRSVREIREILENSSFADSDNGRRIALGAARTALESILREASPGPPPDRGTGRRPRAAQARAGAVLAGGDGGNEGRRADELREAIRGAVTILSGIGGGG 1842
MLQPNSQGHGSYFEAFKRRSNVTLDAAQRDKMLTDRGAYLNFLEIQLERVSAACITSQHFG RIDAATAKATAAEDKVMSATKLVRLAQTYSEEQGREQGRIND MEIRLESLEQQIDAVSAAVDDAAMAQ NL+V TCMGD GIPSARHPPVYPP LHEINTAGLSEWMTGVDKQLEDLRNLVSAQ+TTGSXXXXXXXXXXXGSKATTAVG+SPQSE+DA EATAVPETKT AVATARDECARIEERVRRLEEA+GETS GAGHSGGDS LLSPATTVVDQRDRGRRLERCAELAREGLTRSRSASRSPVRRSPSAPPP+TEIAAAPLASDAGT TVE DNDALLGA EDGTAVARRASEVAEEALKAGREAIERSERTESLAKTIAVRSFKLAKERH+EVTTVLDRLGEDIRRKGD TVRRRPRSAGESRGDGVDSARP G SGT LSAGA GGRRGRCRRAVSATP+ER RSAKARRGDARGFGRQALHD EGATE+LAAAQ PGGG+TGTHRSVREIREILENS+FADSDNGRRIALGAARTALESILREASPG PPD GTGRRPRAAQAR AVLAGGDGGNEGRRADELREAIRGAVTILSGIGGGG
Sbjct: 1 MLQPNSQGHGSYFEAFKRRSNVTLDAAQRDKMLTDRGAYLNFLEIQLERVSAACITSQHFGCRIDAATAKATAAEDKVMSATKLVRLAQTYSEEQGREQGRINDVMEIRLESLEQQIDAVSAAVDDAAMAQSYNLDVGTCMGDDGIPSARHPPVYPPDLHEINTAGLSEWMTGVDKQLEDLRNLVSAQITTGSXXXXXXXXXXXGSKATTAVGNSPQSENDAAEATAVPETKTEAVATARDECARIEERVRRLEEAIGETSAGAGHSGGDSSLLSPATTVVDQRDRGRRLERCAELAREGLTRSRSASRSPVRRSPSAPPPSTEIAAAPLASDAGTLTVEADNDALLGAVEDGTAVARRASEVAEEALKAGREAIERSERTESLAKTIAVRSFKLAKERHKEVTTVLDRLGEDIRRKGDGTVRRRPRSAGESRGDGVDSARPAGTSGTTLSAGAAGGRRGRCRRAVSATPKERHRSAKARRGDARGFGRQALHDVEGATEQLAAAQDPGGGDTGTHRSVREIREILENSAFADSDNGRRIALGAARTALESILREASPGRPPDCGTGRRPRAAQARPRAVLAGGDGGNEGRRADELREAIRGAVTILSGIGGGG 614
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: K3X5Y2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5Y2_GLOUD) HSP 1 Score: 77.8 bits (190), Expect = 1.650e-11 Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 22 GHGSYFEAFKRRSNVTLDAAQRD--KMLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEE 282
G GSY+E + R S + +++ K+LTDR AY++FLE+QLERVSAAC+T+Q F +RI A TA++ KV S +K+ RL Q Y E+
Sbjct: 3 GSGSYYEEYMRSSALAKHGHEKNAKKLLTDRNAYISFLEVQLERVSAACLTTQSFEARIAELEAAQTASDQKVSSLSKVFRLNQEYIEQ 91
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: A0A8J2EZL6_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2EZL6_9DINO) HSP 1 Score: 75.1 bits (183), Expect = 2.300e-10 Identity = 36/74 (48.65%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 70 LDAAQRDKMLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEEQGR 291
LD A+++++LTDR AYLNFLE+QLERVS++C+T Q F RI+ + E+KV++ +L++L Q Y+EE R
Sbjct: 20 LDKAEKNRLLTDRAAYLNFLEVQLERVSSSCLTVQGFSERIEQVQTQVNGMEEKVLNCGRLIKLMQQYNEEVNR 93
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: A0A8J1ZL28_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZL28_9DINO) HSP 1 Score: 73.9 bits (180), Expect = 4.940e-10 Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 10 PNSQGHGSYFEAFKRRSNVTLDAAQRDKMLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEEQGR 291
P S G G A S V D ++++LTDR AYLNFLE+QLERVS++C+T Q F RI+ + A E+KV++ +L++L Q Y+EE R
Sbjct: 15 PRSTGGGGAGAAVGPSSLV--DKVDKNRLLTDRAAYLNFLEVQLERVSSSCLTVQAFSERIEQVQTQVNAMEEKVLNCGRLIKLMQQYNEEVNR 106
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: A0A6A3QG94_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3QG94_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.260e-9 Identity = 57/186 (30.65%), Postives = 95/186 (51.08%), Query Frame = 1
Query: 16 SQGHGSYFEAFKRRSNVTLDAAQRD--KMLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEEQGREQGRINDAMEIRLESLEQQIDAVSAAVD--DAAMAQPNNLNVRTCMGDGGIPSARHPPVYPPGLHEINTAGLSEWMTGVDKQLEDLRNLVSA 561
+QG GSY++ + R + + ++ K+LTDR AY++FLE+QLERVSAAC+T+Q F R+ + A + K+ S +K+ RL Q Y E+ ++ A ++ ++ +D SA ++ + MA + R C + P L E N A L + + ++E+LR V A
Sbjct: 2 AQGSGSYYDDYMRSNAMLKHCGEKSAKKLLTDRSAYISFLEVQLERVSAACLTTQTFERRLAELESSQLANDQKLASLSKVFRLNQEYVEQTAQQNQSELTAHAVKADAW---MDKFSAELERQEPRMATLED-QFRQCQE------------FLPRLAETNDAALHDVKHQAEHEIEELREQVFA 171
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: A0A2P4X7G8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7G8_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 3.450e-9 Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 16 SQGHGSYFEAFKRRSNVTLDAAQRD--KMLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEE 282
+QG GSY++ + R + + +++ K+LTDR AY++FLE+QLERVSAAC+ +Q F R+ + KV S +K++RL Q Y E+
Sbjct: 2 AQGSGSYYDDYMRSNAMLKHCGEKNTRKLLTDRNAYISFLEVQLERVSAACLNTQTFEKRLAELENSQITNDQKVGSLSKVIRLNQEYVEQ 92
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: G5A4A8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4A8_PHYSP) HSP 1 Score: 70.1 bits (170), Expect = 3.570e-9 Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 16 SQGHGSYFEAFKRRSNVTLDAAQRD--KMLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEE 282
+QG GSY++ + R + + +++ K+LTDR AY++FLE+QLERVSAAC+T+Q F R+ A + KV S +K+ RL Q Y E+
Sbjct: 2 AQGSGSYYDDYMRSNAMLKHCGEKNAKKLLTDRNAYISFLEVQLERVSAACLTTQTFERRLAELECAQLANDQKVGSLSKVFRLNQEYVEQ 92
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: A0A8J5M8G1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M8G1_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 5.300e-9 Identity = 37/91 (40.66%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 16 SQGHGSYFEAFKRRSNVTLDAAQRD--KMLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEE 282
+QG GSY++ + R + + +++ K+LTDR AY++FLE+QLERVSAAC+T+Q F R+ + + K+ S +K+ RL Q Y E+
Sbjct: 2 AQGSGSYYDDYMRSNAMLKHCNEKNTKKLLTDRSAYISFLEVQLERVSAACLTTQTFEKRLAELESAQMTNDQKLGSLSKVFRLNQEYVEQ 92
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: A0A225WAZ8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WAZ8_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 7.070e-9 Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 16 SQGHGSYFEAFKRRSNVTLDAAQRD--KMLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEE 282
+QG GSY++ + R + + ++++ K+LTDR AY++FLE+QLERVS AC+T+Q F R+ A A + K+ S +K+ RL Q Y E+
Sbjct: 2 AQGAGSYYDDYMRSNAMLKHCSEKNAKKLLTDRNAYISFLEVQLERVSTACLTTQAFEKRLAALENAQVANDQKLGSLSKVFRLNQEYVEQ 92
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Match: A0A421GGW7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GGW7_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 8.180e-9 Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 16 SQGHGSYFEAFKRRSNVTLDAAQRDK--MLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEDKVMSATKLVRLAQTYSEE 282
+QG GSY++ + R + V ++ +LTDR AY++FLE+QLERVSAAC+T+ F R+ + T + KV S +K+ RL Q Y E+
Sbjct: 2 AQGSGSYYDDYMRSNAVLKHCGDKNAKTLLTDRNAYISFLEVQLERVSAACLTTHTFERRLAELESAQTTNDQKVGSLSKVFRLNQEYVEQ 92 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1401.2377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1401.2377.1 >prot_E-siliculosus-1a_F_contig1401.2377.1 ID=prot_E-siliculosus-1a_F_contig1401.2377.1|Name=mRNA_E-siliculosus-1a_F_contig1401.2377.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=716bp MLQPNSQGHGSYFEAFKRRSNVTLDAAQRDKMLTDRGAYLNFLEIQLERVback to top mRNA from alignment at E-siliculosus-1a_F_contig1401:11298..15518- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1401.2377.1 ID=mRNA_E-siliculosus-1a_F_contig1401.2377.1|Name=mRNA_E-siliculosus-1a_F_contig1401.2377.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4221bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1401:11298..15518- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1401:11298..15518- >mRNA_E-siliculosus-1a_F_contig1401.2377.1 ID=mRNA_E-siliculosus-1a_F_contig1401.2377.1|Name=mRNA_E-siliculosus-1a_F_contig1401.2377.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4296bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1401:11298..15518- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |