mRNA_E-siliculosus-1a_F_contig14.2353.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14.2353.1
Unique NamemRNA_E-siliculosus-1a_F_contig14.2353.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: D7G110_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G110_ECTSI)

HSP 1 Score: 587 bits (1512), Expect = 4.390e-206
Identity = 300/307 (97.72%), Postives = 304/307 (99.02%), Query Frame = 1
Query:    1 SFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGLLSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKVAG 921
            SFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSW GLLSFLEVPNAFML KGRSW+VPMFSVTPVVRLACA+PAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIES+HETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRK +G
Sbjct:  316 SFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWNGLLSFLEVPNAFMLSKGRSWVVPMFSVTPVVRLACAVPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIESMHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKASG 622          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: A0A6H5KFP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP7_9PHAE)

HSP 1 Score: 576 bits (1485), Expect = 1.270e-205
Identity = 297/303 (98.02%), Postives = 299/303 (98.68%), Query Frame = 1
Query:    7 TSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGLLSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKV 915
            TSVAGLPFLPVYAWVGLWTSAFLATLAFV ASNLIEFATQFTDDVFNALLS+NFIYEAARSLMRNF+PAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGLLSFLEVPNAFMLCKGRSWIVPMFSV PVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPA SAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFL LGRKV
Sbjct:   10 TSVAGLPFLPVYAWVGLWTSAFLATLAFVEASNLIEFATQFTDDVFNALLSLNFIYEAARSLMRNFNPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGLLSFLEVPNAFMLCKGRSWIVPMFSVPPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPAMSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLDLGRKV 312          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: A0A835ZK65_9STRA (HCO3 transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK65_9STRA)

HSP 1 Score: 367 bits (943), Expect = 4.040e-123
Identity = 189/305 (61.97%), Postives = 233/305 (76.39%), Query Frame = 1
Query:    4 FTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGL-LSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKV 915
            FTS   LPFLPVY+W G+WTS ++  LA  GASNLI +ATQFTDDVFNALL+VNF++EA+RSL RNF     GY ++GA ++LN+A+ TY   RKT  A +S +FN  IREF+SD GP++VIV MS    +P+   + + FL VP+ FMLC  R W+ PM SV   VR+ACA+PA+LLTSLFFLDQNIS+RVVNSP+H M K  AYHQD+LVLG+ITG LSV+GLPWQCAATVQSLNHVR M+T E   S  G + E I+ + ETR+TGF +HAL+L S+ +LP L +IPM VVSGIFLYLGRKV
Sbjct:   20 FTSAMSLPFLPVYSWCGVWTSGYMLLLAMGGASNLIRYATQFTDDVFNALLAVNFLFEASRSLFRNFQD---GYNKSGAFLALNLALLTYTTTRKTVAARNSRYFNEEIREFLSDSGPVIVIVAMSLLTQVPALSSMGIEFLSVPSKFMLCGSRPWLSPMLSVPLNVRMACAVPAVLLTSLFFLDQNISSRVVNSPKHNMKKPPAYHQDLLVLGLITGTLSVLGLPWQCAATVQSLNHVRAMSTAEIIDSPDGSKEEVIKDVVETRVTGFSIHALILASVGMLPVLKRIPMPVVSGIFLYLGRKV 321          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: A0A836CJA6_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA6_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.860e-108
Identity = 177/306 (57.84%), Postives = 220/306 (71.90%), Query Frame = 1
Query:    1 SFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGL-LSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKV 915
            +FTS A LPFLPVY W GLWTSA +  LA  GASNL+ +ATQFTDDVFNAL+++NF+ EA   L RNF    AG +  GAL+++NVA A+Y+  +  + A  S +FN G+RE +SDFGP++ I  M+    LP+   + L FL VP +FML  GR W+ P+ SV   VRL C LPA+LLTSLFFLDQNISARVVN P HK+ K  AYHQD+L LG+ITG+LSV+GLPWQCAATVQSLNHVR ++T +      G + E +  + ETR+TGF  HAL+L S+  LP L  IPM VVSG+FLYLGRKV
Sbjct:  118 AFTSAAALPFLPVYTWCGLWTSALMVALAAGGASNLVRYATQFTDDVFNALIALNFLAEACGGLARNFKLGGAGGS-GGALLAVNVAGASYLLTQALTQARGSVYFNKGVREQVSDFGPVLAIAAMTAVSHLPAVSSIGLDFLSVPASFMLQGGRGWLSPLLSVPVSVRLLCLLPALLLTSLFFLDQNISARVVNRPAHKLKKPPAYHQDLLTLGVITGVLSVLGLPWQCAATVQSLNHVRALSTTQVVDGPDGEKQEVVTEVCETRVTGFATHALILMSVGALPLLRLIPMPVVSGMFLYLGRKV 422          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: A0A7S1TD95_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD95_9RHOD)

HSP 1 Score: 283 bits (724), Expect = 5.660e-88
Identity = 151/306 (49.35%), Postives = 202/306 (66.01%), Query Frame = 1
Query:    1 SFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGL-LSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKV 915
            SF    GLPFLP+Y+WVGLWT A L  L    AS++I + T+FTDDVFN+L++ NF+YEA+RSL   F  + +  T+    M+L++A+ TY+  R  +    + F    +REF +DFGP + I  MS    LPS + + L  L VP+ F L  GR+W+VP+ +V    R    +PA+LLT LFFLDQNIS RVVNSP H + K AAYH D+L+L ++T + S+ GLPW CAATVQSLNHVR ++T    T   G + E I ++ ETRLTGF +H  +  SL LLP +  IPMAV+SG+FLYLGR +
Sbjct:  172 SFCGRYGLPFLPMYSWVGLWTGAILFFLVIFNASDMIRYCTRFTDDVFNSLIATNFLYEASRSLASGFKSSGSDKTKP--FMALSLALGTYILGRSLAEFRRTRFLRRSVREFFADFGPTIAITAMSALSLLPSVRQISLETLAVPSTFQLANGRAWLVPLSAVAMPYRFLAIVPAILLTCLFFLDQNISVRVVNSPSHALKKPAAYHLDLLILSLVTVICSLFGLPWMCAATVQSLNHVRALSTTRSVTGNDGTKKEQI-TVVETRLTGFLIHLSIGVSLLLLPVIKLIPMAVISGLFLYLGRNI 474          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: M1V6M5_CYAM1 (Probable anion transporter n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6M5_CYAM1)

HSP 1 Score: 280 bits (717), Expect = 6.330e-86
Identity = 154/303 (50.83%), Postives = 202/303 (66.67%), Query Frame = 1
Query:   16 AGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGL-LSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRS--ETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKV 915
            AGLPFLP YAWVG+WT+ FL  LA   AS+LI + T+FTDD FNAL++  F+YEA RS+  NF       T+A   MSL++++ T++  R  S    S +    +REF+SDFG  + I  M+    LP W G  L  L+VP  F L   RSW++P+F+    VRL   +PA+LLT LFFLDQNI+ RVVNSP H++ KG AYH D+L+L +IT + S++GLPW CAATVQSLNHVR +A  E      G RS  E I S+ E RLTGF +H  +  SL LLP L +IP+AV+SG+FLY+GR++
Sbjct:  248 AGLPFLPTYAWVGIWTAFFLFLLAIFNASSLIRYCTRFTDDCFNALIAATFLYEAFRSIGSNFRKCGMDKTEA--FMSLSLSLGTFIVGRTLSEFRQSRYLRRTVREFLSDFGAAIAIFSMTLVSQLPEWGGYTLGRLQVPVKFQLAGNRSWLIPIFAAPVQVRLFAIIPAILLTVLFFLDQNITVRVVNSPAHRLRKGEAYHLDLLILSLITLIASLLGLPWMCAATVQSLNHVRSLAVTETYLRP-GERSPRERIVSVVENRLTGFMIHFALGMSLLLLPLLRRIPIAVISGLFLYMGRRM 547          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: A0A1E7FWX8_9STRA (Bicarbonate transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWX8_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.520e-85
Identity = 153/305 (50.16%), Postives = 209/305 (68.52%), Query Frame = 1
Query:    4 FTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSW-KGLLSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKV 915
            F ++ GLPF PVY+WVGLW S F   L   G+S LI + T+FTD++FNALLSV FIYEA  S+ RNF  A   +      ++L +A  TY    K +   SS F +  IR F+ +FGP+++   MS    LPS+ K  +  L VP+ F L  GR+++V + S+   V+L C+LPA+LLT+LFF+DQNIS RVVN+P +K+ KGAAY+ DM+ LG+ITG+LSV+GLPW C ATVQS+NHV+  A  +   +A  G +E ++ + ETRLTGF VHA++ GSL LLP +  IP+ VVSG+FL+LGRK+
Sbjct:  261 FCTLKGLPFFPVYSWVGLWASFFFTFLGLGGSSQLIRYCTRFTDEIFNALLSVTFIYEAVVSIRRNFEEADP-HNLTTPFVALAMAYTTYRATDKAASFESSKFLDQRIRRFVKNFGPVIIFCAMSGLNCLPSFDKFHIRTLSVPDTFQLAGGRNFVVAINSIPNKVKLLCSLPAVLLTALFFMDQNISVRVVNNPDNKLKKGAAYNLDMVALGLITGVLSVLGLPWMCGATVQSMNHVK--ALTDSVYNAETGETEIVD-VTETRLTGFLVHAMIAGSLLLLPLVRLIPIPVVSGVFLFLGRKL 561          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: A0A7S1FU71_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FU71_9STRA)

HSP 1 Score: 276 bits (705), Expect = 5.010e-85
Identity = 155/306 (50.65%), Postives = 207/306 (67.65%), Query Frame = 1
Query:    4 FTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPA-AAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGL-LSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKV 915
            F  V+ LPF PVYAWVGLWTS F+  L   GAS LI + T+FTD+VFN+LLS+NFIYEA  S+ RNF  A     T     +SL +A+ TY    KT+    + FFN   R  + +FGP+ VI+  +    LP ++ +    L+VP+   L +GR  ++ + +++P VRL CALPA LLT LFF+DQNIS R+VN+  +K+ KGAAY+ DM+ LG+IT  LS+VGLPW C ATVQSLNHVR ++ + P  SAA G +E ++S+ ETR TGF  HA V  S+ LLP L +IP+ VVSG+FL+LGRK+
Sbjct:  204 FCQVSALPFFPVYAWVGLWTSLFMIALGLGGASKLIRYCTRFTDEVFNSLLSMNFIYEALSSIRRNFVQADPTNLTMP--FVSLQMALCTYWLTLKTASFHRTDFFNRKWRSTIKNFGPVSVIIAATLTNLLPFFQRIGCPTLDVPHVIELAEGRRMLISLTAISPAVRLLCALPATLLTCLFFMDQNISTRLVNNKENKLKKGAAYNMDMVALGLITAGLSLVGLPWMCGATVQSLNHVRALSKYCP--SAAPG-TEELDSVIETRATGFFTHAAVASSIFLLPLLSRIPIPVVSGVFLFLGRKM 504          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: A0A7S0CB52_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CB52_9STRA)

HSP 1 Score: 266 bits (680), Expect = 2.430e-83
Identity = 148/307 (48.21%), Postives = 199/307 (64.82%), Query Frame = 1
Query:    4 FTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGL-LSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMA--TFEPATSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKV 915
            + ++ G  FLPVY WVGLWTS F+  L F GAS LI + T FTD++FN LLS+NFIYEA  S+ RNF+  A         +SL +A AT+     T    SS +FN   R  + DFGP+ VI+ MS    +P  K   +  L VP+   L  GR+ IVP  SV   +RL C LPA+LLT+L F+DQNIS RVVN+P++ + KG AY+ DM+VLG+ITG LS+ GLPW C ATVQS+NHVR M    +   T+        ++S++ETR+TG  +HA++LG+L+LL  L  +P+ VVSG+F +LGRK+
Sbjct:   20 YCTLQGFAFLPVYTWVGLWTSLFMILLGFGGASKLIRYCTHFTDEIFNGLLSLNFIYEAWASIHRNFA-LADPINLTMPFVSLGIAFATFKATMGTVAFRSSKYFNEIFRTIIKDFGPVAVIILMSFVNQIPWIKKFGVPTLSVPSTLQLAGGRNLIVPFLSVPLSLRLKCMLPALLLTTLIFMDQNISVRVVNNPKNHLKKGEAYNIDMVVLGVITGFLSIAGLPWMCGATVQSMNHVRAMTKMVYNKVTNEL-----EVDSVNETRVTGLVIHAMILGTLSLLQYLRILPIPVVSGVFFFLGRKL 320          
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Match: B7FQY4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQY4_PHATC)

HSP 1 Score: 271 bits (692), Expect = 1.820e-82
Identity = 155/306 (50.65%), Postives = 204/306 (66.67%), Query Frame = 1
Query:    4 FTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGALSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSW--KGLLSFLEVPNAFMLCKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKMTKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATSAAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLYLGRKV 915
            F  V  LPF P+YAWVGLWTS F   L   G+S LI F T+FTD+VFNALLSVNFIYEA  SL RNF   A         +SL +A++T+    K +   SS + N  IR  + DFGP+ + + MS F    +W  K  +  L VP++F L  GR++++ + ++   ++LAC LPA+LLTSLFF+DQNIS RVVN+P +K+ KGAAY+ DM+ LG+IT  LS+VGLPW C ATVQSLNHVR  A  E   +   G  E I  + ETR+TGF VHAL+  +LA+LP L  +P+ VV+G+FL+LGRK+
Sbjct:  266 FCMVKALPFFPIYAWVGLWTSFFFVLLGLGGSSQLIRFCTRFTDEVFNALLSVNFIYEAVASLKRNFD-LADPMNLTMPFVSLAMALSTFWCTAKVAAFESSKYLNQKIRSIVKDFGPVTIFILMSIFNQR-AWMKKFKVPTLTVPSSFQLSGGRNFLINLNAIPLNIKLACVLPAILLTSLFFMDQNISVRVVNNPDNKLKKGAAYNLDMVALGLITSCLSLVGLPWMCGATVQSLNHVR--ALTETRFNERTGEPEII-GVTETRVTGFAVHALICSTLAILPLLRFVPIPVVAGVFLFLGRKL 566          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14.2353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G110_ECTSI4.390e-20697.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFP7_9PHAE1.270e-20598.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZK65_9STRA4.040e-12361.97HCO3 transporter family-domain-containing protein ... [more]
A0A836CJA6_9STRA1.860e-10857.84Bicarbonate transporter n=1 Tax=Tribonema minus Ta... [more]
A0A7S1TD95_9RHOD5.660e-8849.35Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M1V6M5_CYAM16.330e-8650.83Probable anion transporter n=1 Tax=Cyanidioschyzon... [more]
A0A1E7FWX8_9STRA1.520e-8550.16Bicarbonate transporter n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1FU71_9STRA5.010e-8550.65Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0CB52_9STRA2.430e-8348.21Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
B7FQY4_PHATC1.820e-8250.65Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14contigE-siliculosus-1a_F_contig14:120..4886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size921
Model size921
Exons6
Ec32 orthologEc-22_001570.1
Ec32 ortholog descriptionBicarbonate transporter, eukaryotic
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.U
EggNOG OGsKOG1172@1,KOG1172@2759
EggNOG free text desc.inorganic anion exchanger activity
Seed eggNOG ortholog2880.D7G110
Seed ortholog evalue1.1e-164
Seed ortholog score585.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14.2353.1prot_E-siliculosus-1a_F_contig14.2353.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14 120..4886 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927910.397621-CDS-E-siliculosus-1a_F_contig14:119..2961622927910.397621-CDS-E-siliculosus-1a_F_contig14:119..296Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 120..296 +
1696318733.5564241-CDS-E-siliculosus-1a_F_contig14:119..2961696318733.5564241-CDS-E-siliculosus-1a_F_contig14:119..296Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 120..296 +
1622927910.4111664-CDS-E-siliculosus-1a_F_contig14:1360..15101622927910.4111664-CDS-E-siliculosus-1a_F_contig14:1360..1510Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 1361..1510 +
1696318733.5707688-CDS-E-siliculosus-1a_F_contig14:1360..15101696318733.5707688-CDS-E-siliculosus-1a_F_contig14:1360..1510Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 1361..1510 +
1622927910.4222994-CDS-E-siliculosus-1a_F_contig14:2200..23021622927910.4222994-CDS-E-siliculosus-1a_F_contig14:2200..2302Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 2201..2302 +
1696318733.580723-CDS-E-siliculosus-1a_F_contig14:2200..23021696318733.580723-CDS-E-siliculosus-1a_F_contig14:2200..2302Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 2201..2302 +
1622927910.435803-CDS-E-siliculosus-1a_F_contig14:2598..27061622927910.435803-CDS-E-siliculosus-1a_F_contig14:2598..2706Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 2599..2706 +
1696318733.5898514-CDS-E-siliculosus-1a_F_contig14:2598..27061696318733.5898514-CDS-E-siliculosus-1a_F_contig14:2598..2706Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 2599..2706 +
1622927910.449461-CDS-E-siliculosus-1a_F_contig14:3103..32681622927910.449461-CDS-E-siliculosus-1a_F_contig14:3103..3268Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 3104..3268 +
1696318733.601334-CDS-E-siliculosus-1a_F_contig14:3103..32681696318733.601334-CDS-E-siliculosus-1a_F_contig14:3103..3268Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 3104..3268 +
1622927910.4618406-CDS-E-siliculosus-1a_F_contig14:4667..48861622927910.4618406-CDS-E-siliculosus-1a_F_contig14:4667..4886Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 4668..4886 +
1696318733.611046-CDS-E-siliculosus-1a_F_contig14:4667..48861696318733.611046-CDS-E-siliculosus-1a_F_contig14:4667..4886Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14 4668..4886 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14.2353.1

>prot_E-siliculosus-1a_F_contig14.2353.1 ID=prot_E-siliculosus-1a_F_contig14.2353.1|Name=mRNA_E-siliculosus-1a_F_contig14.2353.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=307bp
SFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNA
LLSVNFIYEAARSLMRNFSPAAAGYTQAGALMSLNVAVATYVGCRKTSGA
LSSTFFNGGIREFMSDFGPLVVIVGMSCFCALPSWKGLLSFLEVPNAFML
CKGRSWIVPMFSVTPVVRLACALPAMLLTSLFFLDQNISARVVNSPRHKM
TKGAAYHQDMLVLGIITGLLSVVGLPWQCAATVQSLNHVRQMATFEPATS
AAGGRSETIESIHETRLTGFCVHALVLGSLALLPQLGKIPMAVVSGIFLY
LGRKVAG
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mRNA from alignment at E-siliculosus-1a_F_contig14:120..4886+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14.2353.1 ID=mRNA_E-siliculosus-1a_F_contig14.2353.1|Name=mRNA_E-siliculosus-1a_F_contig14.2353.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4767bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14:120..4886+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCTTCACGTCCGTGGCGGGGCTCCCGTTCTTGCCAGTGTATGCGTGGGT GGGGCTGTGGACGTCGGCGTTCTTGGCAACGCTGGCCTTCGTGGGGGCTT CGAACCTGATCGAGTTCGCGACGCAGTTCACGGACGACGTGTTCAACGCG CTTCTCTCGGTCAACTTCATCTACGAGGTGACGATGCCGAAGGGATACTT CTGCTACAGACCGAGAGAGAGAATAAACACATGTATCAGGATGCTCTCTG CGTCAACTTCATATTCGAGGAAATGATCCGGAGGTACTGATATATATAGA GAGAGAGCAAGCATATGTACCAAGATGCTATTGTGGGTGGGTGGGTAGGG TTGGAGGCTATTGTTTCGGCGCTATATGTTCGTAAACAATGCACCACGAT GTCCGTTTGTGGGGTTTTAATAATAGGAAAACGTTGTTTCAGTGCTTTTT CTTCGCAAGCGTAAGTCCGGGATATTTTTGGGGGGGAGAGGTTAGTCCGG CGACCCTGTTTTGGTGGTTGGTCGTGAGAGAAGTGACACCAAGCATGTCC CAAGCACGTGACCGCAGAAAGTGGTGTTGGAATGATGAAGCAGCATTTGT ATTCCATAAGAACGGAATGTGTCGCGCAAGCGCGTGTTCATCGTAGTTCA TCGTAGTTCTTCCCACCAGCTACATCCGTATTTGCGTAGAGGTAGTGAGA GGCAAGACATGAAAACCTGCACATGTAACGGCGATGAAAATCAATACGAC AGAAGTATTTATTATCGATCTTGAGTAGCACTTCAAAGAGGGTGGTTGCA GTGTTTTCGAAGCGATTTGAATGTTGTCGTGCGAGACGGAGCGGAGTCTT GGCGATCATATGGGAGAAGAAAGCAACGAAAACGCGAAACAAGAGTTAAA CAACCCTCTCGCTCGAAAACGAGCTACCACAACACTTTAAGTAGGCGAAT GACGTTGACAGGTTGGCGGCTACATGAAACCTTAACCGTGCTGTGTGTCG ATTGACGGATATGTGATCGGAATGAGCCTCTGCGGGCTCCAGCGCTGTAA CTCGTGTTTTTTATTTTTTGCTATTTTCGTTGTAGTATACACGTATCGTT TCCAAGTTTTGGCTGCATGATCACGACACTTTTCCCCACTGGCAATAAAC CGTCGATTTATTACTACCCTTGATTTTTTTAACAACGCTCTTCAAGTCAA CGATGTCAGAGAGCTGATGATGCGCCCGCGCTTGCCTGCAGGCTGCGCGG TCTCTGATGCGGAACTTCAGCCCCGCTGCGGCCGGATACACCCAGGCCGG CGCGCTGATGAGCCTGAACGTTGCGGTGGCGACGTACGTCGGATGCCGCA AGACATCGGGGGCCCTGAGCTCGACATTTTTCAACGGCGGGGTGAGAGCA GATGATAAATAAGAATCGCGTTGTCGTTTGCGAATTGGGAGGTGGTTCGG GATAAATAGGACGACCAAGGTTGTTGTGATCGATAAAGCTGTGGGGTTGA AGTGTGTAGATGGATGGAATAAAGCTGTGGGGTTGAAGTGTGTAGATGGA TGGGAATAAAGCTTGTGGGGTTCAAGGGTTTAGATGGATGGGAAATGGGT GTCGTGGTTTGTGATGGCTGCGGTGTTGTTTAAACACTGACCGCTGTTGT AGTGGAGGTGCATGGCTGTGTTGTACACGCGCCGTGAGGACCGCGCCCAA GCCTTGATCAACCTCACGTACGACGTTCTCAAACTCAGCGCACCCTCTTC CATGCCCAAGCGGAAAACCGAGCATGCTTCACCAACGGCCGGCCACTGCT GCTGCAGCCTCACCCTTAAAATAGGTCTCAAATCAGCATAACAAATGTCG GGGGCACCACACAAGTACCTATAGGCCTGGGATACAGGCCATTGATGGGC ACATTTTCGCGAGCTCTCCGTGTCCACCAGCTTACACGCCGTGAATGTGT TTCTTTGAGAGGATGAGGAAATATCGCCAAGTCATCCCCCGCCGCCGCCC CCGCCCTCGCCTTCACTGCTGATTACTCCGTGTGTTCCCGAACTGCTGTA TTTTTTGTTTTGCTTGCTGTGCTTGCGCTAGATTCGCGAGTTCATGTCAG ACTTCGGACCTTTGGTGGTGATCGTGGGCATGTCGTGCTTCTGCGCCCTC CCGTCATGGAAGGGTCTGCTGAGCTTCCTAGAGGTGGGTGGGTTGTTCCG TGGGTTGTCCCGTAGAGCCTTCCACGGGTTGTCACGCAGATGTCCCAAGG GTTGTTTCTCGGAATATTGTTCCGCGGGTTGTTCCACAATAGTAGGCGCG TTGGGTTGTATTCCGGATGTCACGTGTAATCGGTCTCGTGTTGTCACGGT TTCTTGGAGAGCGAGTACGCAGTCGCACCGTTTTGCGACGATGGCGACCC ATCACTTCGCTCACTTGGGTTTCCTCGCGTGCGCAATGCGTGCTGCATCG CCTTTGCCCTCGCTCTTATCTTGCAAAAGGTGCCGAACGCCTTCATGCTG TGTAAGGGCCGTTCCTGGATAGTTCCCATGTTCTCGGTCACGCCGGTGGT GAGGCTGGCCTGCGCTCTCCCAGCCATGTTGCTCACGGTAAGAGGCCGAA GGCCGCATGCATCATGCCACCCCCTTCCCCCCCCCCCGCCATGCCCGGTA ACGATTTTTCACGATGGATTCCTCCGAAATGGTGAATGATGGAACTGTAG ATCTGGCGGTTCGCCGAGTACCATGCCAACGGTTTGTTCCGAAGAGGTTA GACCGCCATTTTGGCTCAGCACCCTTCGGGTCACGAAGAAATTTAGCGCA CACAATGTACACCCCGCCGCCCGTACCCGCCCGGATCGCCACCGCTCATG ATATTCCTCCGCTCTCGCCTTCCCTACTACTGGTACGCCTCTTGTCAATC TTGTGGCTACTGTTGCCACCCGCTCATGATTTTCCTCCGCTCTCGTCGTC CCTGCGACTGGTGCCCCTACTGCGCCCCGCCCAGTCTCTCTTTTTCTTAG ACCAAAACATCTCGGCTAGGGTGGTGAACTCCCCGCGGCACAAGATGACA AAGGGCGCCGCCTACCACCAGGACATGCTGGTGCTTGGGATAATCACCGG CCTCTTGTCGGTGGTTGGGCTGCCGTGGCAGTGTGCCGCTACTGTGCAGG TTCGTGGGAATTACTTTGCACGCGCACCCGCCGCGACGTACCGTACACGT GCTGGCTGTCGGGTTTTGTTGTGTACTGCTGCATCGTAAGGTTTTCAGCA TGTGGCGTCGCGGGGTATTCCGTCTTACAGGCCGGGATTTTGGAGCTTAC GTGGGATGATTTTTTGTTTGTGTCGCCGAGAAAATAAAACGGAACGCGGA AGAGAATCTTAATCTCGTTGTGTTTTTATCAGAAACAAGGAAGAGAATCG TGGGCTCCCGCCAATGCCATTGTCAAACAAAAAAAGACATTTGTCCGCCG AAGCGTGCCTCAGAGCCTGGAAGAAGTTTCTGGAGGAACTCTTTTCGCGC CAACGGCGGATGTATGAATGGCATCGCATGAGTAGGGGAGGACGGGGGCG AGTAGCCGGAGGAGGGGTCGCCGGGACCCCACTTTTCGGCATGTCCCACG GCCAAAAACAAACGTTGGTACAAGTGCGCAACCAGCGCAAGGCCGCCCTC TCGAACAGCAGCAGATGGCGAACCCTGGTGTAGTTACAGGGGAGGACTGC GCAAGAAATGCCAAGCCAACAATCGTGATCTTTACCAATCGCCCCTGACG TGTGCATTTAGTACTTGCCGTAAATGTAAGGAGGGCGGCCACCGGATGGC GGCGTGCCCGAACCCGTGGGCGCCGTACACATAGACGAATGTAGTAACCC TTTACTATGTTCGTCTATGTTAACGGCGCCCACGGGGTCGGGCACGCCGC CATCCGGTGGCCGCCCTCCCTACATTTACGGCAAATCCTAAGTGCGCACG TGAGGTGTGATTGGTCGAGATCACGATTGTTGGCTTGGCATTTCTTACGC AGTTCCTCCCCCGTCGCTACACCAGCGTTCACCATCTGCAGCTGCTGGAA AAACATAGAAACGATTGTTGTGCCTGGCGTCCTCAACATCTAGACCCTTT TCGCCTCGAGAGACTTCGAACACCATCACCGCCACGCCATAGCTTCGGCT CATACCACTCTCTGAATTTTGTTATTGTATTTATTCCAAGTGCATACTTG AAGTAGATTTGATGTATGCGGTATCATCAACGTATACCTTGCGCATCATG TTTTCGGGCGATTTTTCAACACCTCGATGCTGGAGGCAATTGTTTTCAAC TAATTCGTAGGATGCAAGTAGTAGGATTGCTTCATCTCTCTACGAATCGC TCAACGCCGCCAAACAACTTGCTTCCCCTCTCCATGAAAAGCTCAACACC GCGAACAAACTTTGTTCCTCTCTCTATGAATCGCTCAACAACACGAAACA AACGGGCGTTATTTCTCTGTGAATCGCTCAACACCACCAAACAGCTCTCC TAAAGAATCTCAACATCGCCAAACAACGTGTCATCCCCCCCGGTCCAGAG CCTTAACCATGTCCGGCAGATGGCTACGTTCGAGCCGGCGACGTCGGCGG CAGGGGGTCGCTCCGAGACCATCGAATCTATCCACGAGACGAGGCTGACA GGGTTCTGCGTCCACGCCCTCGTGCTGGGCAGCCTGGCGCTGCTGCCGCA GCTTGGGAAGATCCCGATGGCGGTGGTTTCTGGGATTTTCCTGTACCTCG GCCGGAAGGTAGCTGGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14:120..4886+

>mRNA_E-siliculosus-1a_F_contig14.2353.1 ID=mRNA_E-siliculosus-1a_F_contig14.2353.1|Name=mRNA_E-siliculosus-1a_F_contig14.2353.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1842bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14:120..4886+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCTTCACGTCCGTGGCGGGGCTCCCGTTCTTGCCAGTGTATGCGTGGGT
GGGGCTGTGGACGTCGGCGTTCTTGGCAACGCTGGCCTTCGTGGGGGCTT
CGAACCTGATCGAGTTCGCGACGCAGTTCACGGACGACGTGTTCAACGCG
CTTCTCTCGGTCAACTTCATCTACGAGAGCTTCACGTCCGTGGCGGGGCT
CCCGTTCTTGCCAGTGTATGCGTGGGTGGGGCTGTGGACGTCGGCGTTCT
TGGCAACGCTGGCCTTCGTGGGGGCTTCGAACCTGATCGAGTTCGCGACG
CAGTTCACGGACGACGTGTTCAACGCGCTTCTCTCGGTCAACTTCATCTA
CGAGGCTGCGCGGTCTCTGATGCGGAACTTCAGCCCCGCTGCGGCCGGAT
ACACCCAGGCCGGCGCGCTGATGAGCCTGAACGTTGCGGTGGCGACGTAC
GTCGGATGCCGCAAGACATCGGGGGCCCTGAGCTCGACATTTTTCAACGG
CGGGGCTGCGCGGTCTCTGATGCGGAACTTCAGCCCCGCTGCGGCCGGAT
ACACCCAGGCCGGCGCGCTGATGAGCCTGAACGTTGCGGTGGCGACGTAC
GTCGGATGCCGCAAGACATCGGGGGCCCTGAGCTCGACATTTTTCAACGG
CGGGATTCGCGAGTTCATGTCAGACTTCGGACCTTTGGTGGTGATCGTGG
GCATGTCGTGCTTCTGCGCCCTCCCGTCATGGAAGGGTCTGCTGAGCTTC
CTAGAGATTCGCGAGTTCATGTCAGACTTCGGACCTTTGGTGGTGATCGT
GGGCATGTCGTGCTTCTGCGCCCTCCCGTCATGGAAGGGTCTGCTGAGCT
TCCTAGAGGTGCCGAACGCCTTCATGCTGTGTAAGGGCCGTTCCTGGATA
GTTCCCATGTTCTCGGTCACGCCGGTGGTGAGGCTGGCCTGCGCTCTCCC
AGCCATGTTGCTCACGGTGCCGAACGCCTTCATGCTGTGTAAGGGCCGTT
CCTGGATAGTTCCCATGTTCTCGGTCACGCCGGTGGTGAGGCTGGCCTGC
GCTCTCCCAGCCATGTTGCTCACGTCTCTCTTTTTCTTAGACCAAAACAT
CTCGGCTAGGGTGGTGAACTCCCCGCGGCACAAGATGACAAAGGGCGCCG
CCTACCACCAGGACATGCTGGTGCTTGGGATAATCACCGGCCTCTTGTCG
GTGGTTGGGCTGCCGTGGCAGTGTGCCGCTACTGTGCAGTCTCTCTTTTT
CTTAGACCAAAACATCTCGGCTAGGGTGGTGAACTCCCCGCGGCACAAGA
TGACAAAGGGCGCCGCCTACCACCAGGACATGCTGGTGCTTGGGATAATC
ACCGGCCTCTTGTCGGTGGTTGGGCTGCCGTGGCAGTGTGCCGCTACTGT
GCAGAGCCTTAACCATGTCCGGCAGATGGCTACGTTCGAGCCGGCGACGT
CGGCGGCAGGGGGTCGCTCCGAGACCATCGAATCTATCCACGAGACGAGG
CTGACAGGGTTCTGCGTCCACGCCCTCGTGCTGGGCAGCCTGGCGCTGCT
GCCGCAGCTTGGGAAGATCCCGATGGCGGTGGTTTCTGGGATTTTCCTGT
ACCTCGGCCGGAAGGTAGCTGGAAGCCTTAACCATGTCCGGCAGATGGCT
ACGTTCGAGCCGGCGACGTCGGCGGCAGGGGGTCGCTCCGAGACCATCGA
ATCTATCCACGAGACGAGGCTGACAGGGTTCTGCGTCCACGCCCTCGTGC
TGGGCAGCCTGGCGCTGCTGCCGCAGCTTGGGAAGATCCCGATGGCGGTG
GTTTCTGGGATTTTCCTGTACCTCGGCCGGAAGGTAGCTGGA
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