mRNA_E-siliculosus-1a_F_contig1399.2350.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1399.2350.1
Unique NamemRNA_E-siliculosus-1a_F_contig1399.2350.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: D8LSX2_ECTSI (Similar to intersectin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX2_ECTSI)

HSP 1 Score: 661 bits (1705), Expect = 7.330e-227
Identity = 385/397 (96.98%), Postives = 388/397 (97.73%), Query Frame = 2 
Query:  338 MPGPGGFGRGGGFRXXXXFXXXXXXXXXXXXXXXGPLFGPGPGPLGLVGAVATGAAIAAVVGXXXXXXXXXXXAGYIYVVQDPQPGQVGHAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQITMNDGYKYGVLRRYSQFDQLRERVARVIRTTTPPFPPKSSIRSSTVGLGPADLEERRQMLQAWLQSLCTAASTNTPALRVPLYDFLETASYYPPEAPVTSSDPTAASAQHTAVATPAATTATTGVPVAAAYAEALPXXXGTKGVGVPSAGPLPPKPDSAGDGWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHSSANPFG 1528
            MPGPGGFGRGGGFRXXXXFXXXXXXXXXXXXXXXGPLFGPGPGPLGLVGA+ATGAAIAAVVGXXXXXXXXXXXAGYIYVVQ+PQ GQVGHAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQITMNDGYKYGVLRRYSQFDQLRERV+RVIRTTTPPFPPKSSIRSSTVGLGPADLEERRQMLQAWLQSLCTAAS NTPALRVPLYDFLETA YYPPEAPVTSSDPTAASAQHTAVATPAATTATTGVPVAAAYAEALP   GTKGVGVPSAGPLPPKPDS G GWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHS ANPFG
Sbjct:    1 MPGPGGFGRGGGFRXXXXFXXXXXXXXXXXXXXXGPLFGPGPGPLGLVGALATGAAIAAVVGXXXXXXXXXXXAGYIYVVQEPQSGQVGHAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQITMNDGYKYGVLRRYSQFDQLRERVSRVIRTTTPPFPPKSSIRSSTVGLGPADLEERRQMLQAWLQSLCTAASANTPALRVPLYDFLETAMYYPPEAPVTSSDPTAASAQHTAVATPAATTATTGVPVAAAYAEALPPAAGTKGVGVPSAGPLPPKPDSTGYGWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHSLANPFG 397
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: A0A6H5JHJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ6_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 6.740e-121
Identity = 204/212 (96.23%), Postives = 204/212 (96.23%), Query Frame = 2 
Query:  893 MLQAWLQSLCTAASTNTPALRVPLYDFLETASYYPPEAPVTSSDPTAASAQHTAVATPAATTATTGVPVAAAYAEALPXXXGTKGVGVPSAGPLPPKPDSAGDGWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHSSANPFG 1528
            MLQAWLQSLCTAASTNTPALRVPLYDFLETASYYPPEAPVTSSDPT ASAQHTAVATPAATTATTGVPVAAAYAEALP   GTKGVGV SAGP PPKPDSA DGWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHS ANPFG
Sbjct:    1 MLQAWLQSLCTAASTNTPALRVPLYDFLETASYYPPEAPVTSSDPTTASAQHTAVATPAATTATTGVPVAAAYAEALPPAAGTKGVGVSSAGPPPPKPDSAEDGWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHSLANPFG 212
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: A0A6H5JJX9_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJX9_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 4.380e-59
Identity = 106/111 (95.50%), Postives = 109/111 (98.20%), Query Frame = 2 
Query:  557 AGYIYVVQDPQPGQVGHAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQITMNDGYKYGVLRRYSQFDQLRERVARVIRTTTPPFPPKSSIRSSTVGLGPADLEERR 889
            AGYIYVVQ+PQPGQV HAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQ+TMNDGYKYGVLRRYSQFDQLRERV+RVIRTTTPPFPPK SIRSSTVGLGPADLEERR
Sbjct:    9 AGYIYVVQEPQPGQV-HAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQVTMNDGYKYGVLRRYSQFDQLRERVSRVIRTTTPPFPPKCSIRSSTVGLGPADLEERR 118
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: A0A7S2SL29_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SL29_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.690e-12
Identity = 43/72 (59.72%), Postives = 52/72 (72.22%), Query Frame = 2 
Query: 1277 KLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKR 1492
            KL+  Q   AL T TG  +E LR+VW L+DID+DG LDRDEFAVA +L  QA AG+  PASLP ++VPP KR
Sbjct:  218 KLSPAQVRDALMT-TGLPRETLRSVWELADIDRDGKLDRDEFAVAMFLCRQAQAGSALPASLPVEVVPPGKR 288
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: A0A7S2F4E5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4E5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.270e-11
Identity = 50/107 (46.73%), Postives = 62/107 (57.94%), Query Frame = 2 
Query: 1205 WAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHSSANPF 1525
            WAV P   + + +  +  GPS  GKL+  Q   AL   TG  Q  LR +W LSDID+DG LD DEFAVA YL  QA  G   P +LP+ +VPPSK+    +   NPF
Sbjct:  132 WAVAPYQAEFNQVFYSK-GPSN-GKLSPAQVREALMA-TGVAQGVLRCIWELSDIDKDGQLDMDEFAVAMYLCRQAQRGQPMPQALPSQVVPPSKKS---YIVGNPF 232
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: A0A8C4S9C0_ERPCA (Epidermal growth factor receptor pathway substrate 15 n=4 Tax=Polypteridae TaxID=8289 RepID=A0A8C4S9C0_ERPCA)

HSP 1 Score: 77.8 bits (190), Expect = 1.030e-10
Identity = 64/179 (35.75%), Postives = 85/179 (47.49%), Query Frame = 2 
Query: 1205 WAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHSSANPF--G*PGEKRDQTRFRGVQYVVSQNS*YVVST*SGFDRARVFVFFSRVFLPSAPSKD--VGYPRRQDAHFRRG 1729
            W+V PE +   D      GP   G L+G++    L        + L  VW LSDID+DGMLDRDEFAVA YL ++A      P SLPA +VPPSKR+ A   S  P     P  K  +          S+   +VVS     D+A+    +  +FL +   KD  V  P  +D   + G
Sbjct:  123 WSVKPEEKLKFDTIFDSLGP-VKGMLSGDKVKPVLLNSK-LPVDVLGRVWELSDIDRDGMLDRDEFAVAMYLVYRALEKEPVPMSLPAALVPPSKRKKATLPSIVPLLPSPPSSKESRQSLPASNAAASKALPWVVSA---ADKAK----YDEIFLKTDKDKDGLVSGPEVRDIFLKTG 292
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: UPI00146EE9B3 (epidermal growth factor receptor substrate 15-like n=1 Tax=Pseudochaenichthys georgianus TaxID=52239 RepID=UPI00146EE9B3)

HSP 1 Score: 75.1 bits (183), Expect = 2.100e-10
Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 2 
Query: 1190 SAGD-GWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQ 1495
            SAGD  W V PE +   D      GPS  G LTG++    L        + L  VW LSDID+DGMLDRDEF+VA YL ++A  G   P SLP  +VPPSKR+
Sbjct:   31 SAGDLHWVVKPEEKMKFDAIFESLGPSG-GILTGDKVKPVLLNSK-LPVDILGRVWELSDIDRDGMLDRDEFSVAMYLVYRALEGEPVPMSLPPPLVPPSKRK 131
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: A0A6P8WJF3_GYMAC (LOW QUALITY PROTEIN: epidermal growth factor receptor substrate 15-like 1 n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8WJF3_GYMAC)

HSP 1 Score: 75.1 bits (183), Expect = 2.370e-10
Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 2 
Query: 1190 SAGD-GWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQ 1495
            SAGD  W V PE +   D      GPS  G LTG++    L        + L  VW LSDID+DGMLDRDEF+VA YL ++A  G   P SLP  +VPPSKR+
Sbjct:  113 SAGDLHWVVKPEEKMKFDAIFESLGPSG-GILTGDKVKPVLLNSK-LPVDILGRVWELSDIDRDGMLDRDEFSVAMYLVYRALEGEPVPMSLPPPLVPPSKRK 213
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: A0A7S3URG0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URG0_HETAK)

HSP 1 Score: 68.9 bits (167), Expect = 3.860e-10
Identity = 43/74 (58.11%), Postives = 51/74 (68.92%), Query Frame = 2 
Query: 1319 TGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAA-GNKPPA--SLPADIVPPSKR--QAAQHSSANPF 1525
            TGA  + L  VW LSD+D+DG LDR+EFAVA YLA + AA G   PA  SLPA +VPPS+R   AA  S+ NPF
Sbjct:   52 TGADAQALAQVWELSDLDRDGALDREEFAVAHYLAAEVAAKGGALPAGPSLPAALVPPSRRGRPAASASANNPF 125
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BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Match: A0A0L0D9J8_THETB (EH domain-containing protein 3 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9J8_THETB)

HSP 1 Score: 74.3 bits (181), Expect = 7.130e-10
Identity = 53/120 (44.17%), Postives = 67/120 (55.83%), Query Frame = 2 
Query: 1175 PPKPDSAGDG-WAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQA--AAGNKPPASLPADIVPPSKRQAAQHSSANPF 1525
            PP P  A D  WA+ PE +   D      GP  AGKL+G  A  A+   +      LR +W L+DID+DG LD DEFAV  +L  Q   A G+  P +LPA++VPPSKR     S A+PF
Sbjct:  410 PPNPFGASDSDWAIGPEEKQKWDSYFVKMGP-VAGKLSGASAKPAM-VASKLDTTTLRDIWTLADIDRDGHLDADEFAVCMHLLQQKKNAPGSPLPTALPANLVPPSKRGG---SEASPF 524
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1399.2350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSX2_ECTSI7.330e-22796.98Similar to intersectin 2 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JHJ6_9PHAE6.740e-12196.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJX9_9PHAE4.380e-5995.50PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S2SL29_9STRA5.690e-1259.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2F4E5_9STRA1.270e-1146.73Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8C4S9C0_ERPCA1.030e-1035.75Epidermal growth factor receptor pathway substrate... [more]
UPI00146EE9B32.100e-1048.54epidermal growth factor receptor substrate 15-like... [more]
A0A6P8WJF3_GYMAC2.370e-1048.54LOW QUALITY PROTEIN: epidermal growth factor recep... [more]
A0A7S3URG0_HETAK3.860e-1058.11Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0L0D9J8_THETB7.130e-1044.17EH domain-containing protein 3 n=1 Tax=Thecamonas ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1399contigE-siliculosus-1a_F_contig1399:19374..25388 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1194
Model size3354
Exons5
Ec32 orthologEc-26_001740.1
Ec32 ortholog descriptionPhox homologous domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGsKOG0998@1,KOG0998@2759
EggNOG free text desc.endocytosis
KEGG Pathwayko04144,map04144
KEGG koko:K12472
Seed eggNOG ortholog2880.D8LSX2
Seed ortholog evalue5.8e-190
Seed ortholog score670.2
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927910.1373358-UTR-E-siliculosus-1a_F_contig1399:19373..197101622927910.1373358-UTR-E-siliculosus-1a_F_contig1399:19373..19710Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1399 19374..19710 +
1696318733.418978-UTR-E-siliculosus-1a_F_contig1399:19373..197101696318733.418978-UTR-E-siliculosus-1a_F_contig1399:19373..19710Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1399 19374..19710 +
1622927910.2355118-UTR-E-siliculosus-1a_F_contig1399:23565..253881622927910.2355118-UTR-E-siliculosus-1a_F_contig1399:23565..25388Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1399 23566..25388 +
1696318733.4902668-UTR-E-siliculosus-1a_F_contig1399:23565..253881696318733.4902668-UTR-E-siliculosus-1a_F_contig1399:23565..25388Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1399 23566..25388 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927910.1543348-CDS-E-siliculosus-1a_F_contig1399:19710..198461622927910.1543348-CDS-E-siliculosus-1a_F_contig1399:19710..19846Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 19711..19846 +
1696318733.4313369-CDS-E-siliculosus-1a_F_contig1399:19710..198461696318733.4313369-CDS-E-siliculosus-1a_F_contig1399:19710..19846Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 19711..19846 +
1622927910.1673326-CDS-E-siliculosus-1a_F_contig1399:20481..207231622927910.1673326-CDS-E-siliculosus-1a_F_contig1399:20481..20723Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 20482..20723 +
1696318733.446676-CDS-E-siliculosus-1a_F_contig1399:20481..207231696318733.446676-CDS-E-siliculosus-1a_F_contig1399:20481..20723Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 20482..20723 +
1622927910.1924093-CDS-E-siliculosus-1a_F_contig1399:21403..215761622927910.1924093-CDS-E-siliculosus-1a_F_contig1399:21403..21576Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 21404..21576 +
1696318733.459214-CDS-E-siliculosus-1a_F_contig1399:21403..215761696318733.459214-CDS-E-siliculosus-1a_F_contig1399:21403..21576Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 21404..21576 +
1622927910.2110326-CDS-E-siliculosus-1a_F_contig1399:22392..229031622927910.2110326-CDS-E-siliculosus-1a_F_contig1399:22392..22903Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 22393..22903 +
1696318733.470283-CDS-E-siliculosus-1a_F_contig1399:22392..229031696318733.470283-CDS-E-siliculosus-1a_F_contig1399:22392..22903Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 22393..22903 +
1622927910.2240481-CDS-E-siliculosus-1a_F_contig1399:23433..235651622927910.2240481-CDS-E-siliculosus-1a_F_contig1399:23433..23565Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 23434..23565 +
1696318733.481517-CDS-E-siliculosus-1a_F_contig1399:23433..235651696318733.481517-CDS-E-siliculosus-1a_F_contig1399:23433..23565Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1399 23434..23565 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1399.2350.1prot_E-siliculosus-1a_F_contig1399.2350.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1399 19711..23565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1399.2350.1

>prot_E-siliculosus-1a_F_contig1399.2350.1 ID=prot_E-siliculosus-1a_F_contig1399.2350.1|Name=mRNA_E-siliculosus-1a_F_contig1399.2350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=398bp
MPGPGGFGRGGGFRGGGGFGRGFGRGFGWGPRFGGPLFGPGPGPLGLVGA
VATGAAIAAVVGPPPHRRYPPPPAGYIYVVQDPQPGQVGHAPPRAVRAAE
TPFIIMRVALASYRTGQGGEVLFEVQITMNDGYKYGVLRRYSQFDQLRER
VARVIRTTTPPFPPKSSIRSSTVGLGPADLEERRQMLQAWLQSLCTAAST
NTPALRVPLYDFLETASYYPPEAPVTSSDPTAASAQHTAVATPAATTATT
GVPVAAAYAEALPPAAGTKGVGVPSAGPLPPKPDSAGDGWAVPPESRDAS
DLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGML
DRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHSSANPFG*
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mRNA from alignment at E-siliculosus-1a_F_contig1399:19374..25388+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1399.2350.1 ID=mRNA_E-siliculosus-1a_F_contig1399.2350.1|Name=mRNA_E-siliculosus-1a_F_contig1399.2350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6015bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1399:19374..25388+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTCACAGTTCCGCAGCACGTTCCGCCTCTAGAACAACACGCAAGCACACG
CGCCCTTCCAAGCTAGAAAACGGAGCAGCGGGCCCTGCTTCTTTTGCCCA
TTATCTTCTCTCTCTCCCGGTTGGTCGTCAGTTGCCTTTGGTCCTCCTCA
ATTCTCTTCGATCCGAAATACTACACGCAGCCTGCCTACTGAGCGGCTAA
CTTCAACACGAACCGAAGCTGCGCTTCAAGAGAGGAGCACCTGCTGCTGC
AGAGTTTACTGCGGCTGGACACGGGGTTGAAGCAAGCGCACGCAGAAGAA
GACCAACAACCCGGCATCTACATCTTCTTGAGCCACAATGCCTGGCCCTG
GAGGTTTCGGACGCGGCGGCGGGTTTAGAGGCGGCGGAGGATTCGGGAGA
GGATTCGGAAGAGGGTTCGGATGGGGGCCGAGGTTCGGTGGCCCTCTGTT
TGGTCCAGGCCCGGGGCCTCTCGGTAAGCTAAGGGCCAAGTTCTGGTCTT
GTGACATGATGAGTCTGTGCACTGGTGTAAACTTGTGCGTGGCTGCTGCT
GTGGTTTATTGTTTTTTGTATCATGCGCGCGTGTACGAGAGCCCACCTGG
AGTCGCGTTTGTCTGAGCCAGCAGCCTGCGAGCAAGAGTTTTTTCTCGCT
TCTCCTGAGAGCACCCTTTGCCACACGTCCGCGTGTTGATTATCCTTCTC
CTGCGAATCCCATTCGCTCTCACTCTATATCTAGATACAGCAGTCAGATG
TGCTGCTCAACCGCGTTTTCCGATTTTGTCGGCCCCGTGTGAGTAATTCT
GAAGAGCCCGGACTGGCTCTTTTTTGTTTCTTGTCGGGTGCTGCTGTATC
GTGTAACCTGATTCAGAGTACATGCGCATTCAACAGCAGTTTCACCCGTC
CTCTTGCAAACGTAGACATTTTCTGAGCCACGTGCAGATAGGCATACGCC
TACCCTGCTGCTGCTGTTGCTGCTGCTGTATGGATCACTTCGTAGATCGC
GCGGCTTATAGCAATCACCTCTGCTCGTGGTGCCCGTACATAAATGGTGT
AATCCCTATCCAAACCGCATCACCGGTACACAACGCCCCCGTCCTTCTTC
GTTCCCAGGCTTGGTGGGTGCTGTGGCAACCGGAGCAGCCATCGCCGCTG
TAGTCGGCCCGCCCCCGCACCGCAGGTACCCCCCCCCGCCAGCCGGCTAC
ATCTACGTCGTGCAGGACCCGCAGCCAGGGCAAGTAGGGCACGCGCCTCC
TAGGGCGGTGCGAGCGGCGGAGACGCCGTTCATCATCATGCGGGTCGCCT
TGGCGTCGTACCGCACGGGACAGGGGGGAGAGGTGCTCTTCGAAGTGCAG
GTGAGAGAGAGACAGAGCGCCATGCCGAAGGTCGCGAAATCGAAATCTAC
CACGGTCGGTCATGGGTGGGGGTGATGTGTACGGTGGGGGGCTACGCTGG
ATCAGGTTGGTTGTCCGTAGGCAGGCTGTAGGGCGCCGGTCGCGGTTAGC
GATCTAGGAGGAGGGTTTGAAGCTATGAGAAAAAATTATCCCCCCAGGGC
AGCGCGACCGTACCTATGGTTGTCACGCACCGTTCTTGGGCAACGAAGAG
ACGTTCTATTAGTGACAGAAAGCCAGTACTGGAATGGTCGCGGAAACAAG
TCCATGCTGAGAGATTTTGTGTTGAAGCAATACAGAAAGATCGGGACGTT
TTCTCGATTTCTTGCAGGAGTTCTGAACCCCCCGGTGAGCAGCGTTAACG
CCTCCTCTGGATTCGTCGTGACTGTGCACGCCTTGCGGCTTTCATAGAGT
GGCGTTGTTGCGCATACGGCGGGATACTGTACCTTGCCAGCAGCTCACAT
TAGCTCGAAGACCTCTCACTCTCTGACATGTTCCTCCACCCCCCCCTTCA
GAATTCGCCATTACCATCTGGTGTTTCAGGATCCCTTTCGAAAATGTGCG
CCGGACACTTACGCCGAGTTACAACCGCTTTTTTGTCCCTCGTGCTGCTG
CTGCTTCTCCGCCCTCTGTCTCTCGCCCAGATCACCATGAACGACGGCTA
CAAGTACGGTGTGCTGAGGCGCTACTCGCAGTTCGACCAGCTCCGAGAAC
GCGTTGCGCGGGTTATTCGCACGACGACCCCGCCCTTCCCCCCCAAGAGC
AGCATCCGGAGCTCGACCGTGGGGCTCGGACCGGCTGACTTGGAAGAGCG
GCGGTAAGAACGAGAGCGTGGTCATGATCGATCGTGTGTCGTGTGTGTTC
GTCCCGTTTGTTGTTGCCCCAGTCTACACGCCAACACAGATATTTTTTTG
TATGTCTGGCGTACCAGCCGGGGTCACTCAAGAGGAAGGTCACACAGGAA
CTTTTATCCTTTTTTTGTTCTTGGTGCCCCACCTTTCTCCCTGCGCCGCT
TGCCCTAGTTTTTGCCGTGATAAGGTTGTGCCATCATGCGACAAACCAAG
ACGTGACGTCATGCGTGTCTTTGTACCACATGCCATGAATGGTTCTCTGT
GTGTTCCGTACCGCGGTACCAGAGTAGATGGGACGAAATCTAAACGGAGG
GTGCTGCAATATATAGGAGCAATGGTATATCGCAGCAGCGTCTCCCGGCA
CCCTTGCAGGGTTAGCCACCGATCGCCATCGTGTTTCGAGGCTCAACACC
TTGCAGCTGTTGGACTTGCGATAGAGAAGGCTTAAACATCCCCTGACGGT
GACGGGAGAACCTGCCATACCCCTACACACGATAAACACGCTTTTTGATA
CGACTCCCCCTCTTTGCCCAGCCACCCTCCCTAGCCCACTGGATACCGCG
TAGGCCGAGTAAGGGGTGATGGTGTGGTCAGATTGAACGTAATAGATGCT
CGCGACAAGTATGGGTGTACAGCACCCTACCTCACAAGACCTTAGCAGCC
GCCCTTGTACGCGCACTACCCTGCTCCGTCTCCTCAAGGACGGAGTGGTC
AACCGTCTAATAACGAAGGCATGGTAACGATGACTACCTCCCCCCCCCCC
CTTCCCCCCCCACCTCCAGACAAATGCTGCAGGCGTGGCTGCAGTCCCTC
TGCACGGCGGCCTCCACCAACACCCCGGCCCTCCGCGTGCCCCTGTACGA
CTTCCTCGAGACGGCCTCGTACTACCCGCCCGAAGCGCCCGTCACGTCGT
CCGACCCGACCGCCGCCTCCGCCCAGCACACCGCCGTGGCCACTCCCGCC
GCCACCACCGCCACCACCGGCGTACCGGTCGCCGCTGCCTACGCCGAGGC
CTTGCCCCCCGCCGCGGGTACCAAGGGCGTCGGAGTTCCGTCCGCCGGCC
CCCTGCCACCGAAGCCGGACTCCGCCGGAGACGGCTGGGCGGTACCCCCG
GAGTCGCGAGACGCGTCCGACCTCAAGATGGCCATGGCCGGCCCGAGCGC
GGCGGGAAAGCTTACCGGAGAGCAGGCGGCGGTGGCCTTGAGGACGGGGA
CCGGGGCCGGGCAGGAGGACTTGAGGGCCGTGTGGGCGCTGTCGGACATC
GACCAGGACGGGATGTTGGACCGCGACGAGGTGCGCCGAAAATTGTGGTT
TTGGCTGCTGGGGGAGCCTGTTTTGTCTCGAAGGGTTTTTTGGGGGAGAT
TTTGGGAGGCAACAACGGCTTAGTGGACAGTTTTTTTGAGTTTCTTTCTC
AACAAACTCGTGTGGTTTTTTCGTTTTTTGCTTTCCCGCTTTCGAGTGTT
ACCGTGGCGACGAATACGTCTCGATTTCAAGGGTTTTGTTTCTCGCGGTG
TGACAAATGCAATGCCTCCTACGAATCCGAACTACTACTGTACCGAGGAT
TCAACGAGGTTCTGCGAAACAGTAATCACCCTTCCTGCCCCGGTTCCACA
TGGACACGACGCTGCAAGAAATTTTGAAATTCCCTCGTATGTTGCTACCT
GCTGTCCCTGTTTGTAACAACACGAAGAGTCTTCACCTACTTAGCGCCCT
CCTTTGTCGCCCCCCGCCCGCCCATCCGTTTTTCATTTTTTTCTCTATCG
CACATCCGACCTTCGTTTCATGTCGCTTGGGCCACGCACATGTGGGTTCT
GCTGGAACAGTTTGCCGTTGCGTGGTACCTGGCCCACCAAGCCGCGGCGG
GCAACAAGCCGCCTGCTTCGCTTCCAGCCGACATCGTGCCGCCTTCCAAG
CGCCAAGCCGCACAGCACAGCTCGGCGAACCCGTTCGGTTAGCCGGGGGA
AAAGAGAGATCAAACCCGCTTTCGGGGGGTACAATACGTTGTTTCACAAA
ACTCGTAGTACGTGGTATCAACGTAGAGTGGGTTCGACCGGGCACGCGTT
TTCGTTTTTTTTTCTCGTGTATTTTTGCCGTCGGCACCGAGCAAAGACGT
AGGGTACCCTCGTCGTCAGGACGCCCACTTCCGGAGGGGGCAGGCAGCCT
TCTTTCGTTGTATACGGTGGCATGAAGGTGTAGTCTCGAAAGAATTCCCG
CCCCTCTTCGCCTCAGCCGCCGGCTTTGGAATCAGGAGTGGGATCCAGAG
CGGGGTTTCTTATCCACAGCAGGGAATCAACATGATAGCCCCGTTCAATT
CGTGTCTCCTCTGTATATTTTGTATGTACTTCGTCTACTGCAGTACTGCA
GTAGTGGCCGCGTCATCTCGACGCCTGTCATCGACAGGTGAACATATTTT
TCTCAGTTCAGGTTGTTGCCGCTGCGCCGGGTGTGCTGGATAGAGCATGG
GCGGGGACCCGAAAGGTGCGGTTGTGGTATGCGTAGCAAGACGGTGACAT
TGCTCACACCCGACTCGTGCCAAAAACGCAACGAGAGACGAGACTCGAGT
TCCGGTTCTACAGTAGCCGCGTTCATGTTCGTTTCGCACGAAGGGCAGAG
AATCATCCATTTCAAGAGGCTAAGAGGAGGACGAGATGATTCGGAATCTG
CGGATGCGACGTAGAAGGACTGCCTTGGAGAACGGACAAACAATCGAGCG
TGGTCATGTGTTCGAGGAGTGACCCTGGAAACGTTAAGACTCCGGCTGTG
GAGGACAACATGCTGATATTTCGGCCGCTGATGTTACCTGGCTGTCCGCG
TGTTTAGAGGGGATAGAGCCAGGGAGGTCAAGCGAGTATCTTTCGTGCGC
GCGCCTTCCTAGAACGTACACCTACAGCAAGTAGCTTAAAAGACCGACCA
TGGGCTGTTGAGTCGTGACACGGCGAAACCATCTCAAGTCTAGAATGCTA
GGTGCACGAAAAACGCCCAAACGAGTTGTTCATCGCAAGGGTCATGGGGC
TATTTGGTGGGAAATAGGCGAGAAGAACCCCAAGGCTTCAAAGCCAGGTG
CACGAAACACGAAAACGTGTTTATCGTAATGGCCACCGGGGCATTTTGGT
GCGCTGTATGCTCCAACAACTAGCCTTGAAAGGGTTTGCGCGCAGGTTGT
GAGGAAAAATGCCACCCACGCGACGATAGAGGAGGCCACGGTGCGCATTA
TGGTTCCTAGTGCACCGCCGTCTCTGCGCCCTCGCCCCCAAGCACGAAAT
TCGGGGCACATCTTGCGATGTCCGGCAAAAAAACACAAAAGTCCAGGTCT
TCGCATCGAAGCAACCCGATCACACGCCGCACTCGCTTCCATCACAAGCG
CCAGCCACGCTTGACGCAAACACAAGACGCAAAACCGTGCGCCAAACAAA
AAAAAAACGGAATACCTCGTCCGTTCTTTTTTTTCTTGATTTTTTAGGAT
CTCCTTTTCTTTATTGGTGGTTGGCCCCTCTCAACTCGCTTTCAGAAACC
GAACGGATGGGAGCCAGCCCCTCCAGGGGGAAGAGGGGTAAAAACAACGA
GCCTAGACACTAGCACCTTCCGACGTAACTCTCTCAAGGGCAACCTGCTA
CCTTATACGGGCTATACCGTGCGCTTGGCAACAGGTGTCTGCTTGGAGTG
TCATAGGACGCATCAAGCAAAAATACGACACCCCGACTGCACGCCAATGT
TGGGACAACGTCAGACAGATAACCCCTGCGATGTGCTCCGCGGTCGGTCG
ATCGATTCATCGGCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1399:19374..25388+

>mRNA_E-siliculosus-1a_F_contig1399.2350.1 ID=mRNA_E-siliculosus-1a_F_contig1399.2350.1|Name=mRNA_E-siliculosus-1a_F_contig1399.2350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2388bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1399:19374..25388+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCTGGCCCTGGAGGTTTCGGACGCGGCGGCGGGTTTAGAGGCGGCGG
AGGATTCGGGAGAGGATTCGGAAGAGGGTTCGGATGGGGGCCGAGGTTCG
GTGGCCCTCTGTTTGGTCCAGGCCCGGGGCCTCTCGATGCCTGGCCCTGG
AGGTTTCGGACGCGGCGGCGGGTTTAGAGGCGGCGGAGGATTCGGGAGAG
GATTCGGAAGAGGGTTCGGATGGGGGCCGAGGTTCGGTGGCCCTCTGTTT
GGTCCAGGCCCGGGGCCTCTCGGCTTGGTGGGTGCTGTGGCAACCGGAGC
AGCCATCGCCGCTGTAGTCGGCCCGCCCCCGCACCGCAGGTACCCCCCCC
CGCCAGCCGGCTACATCTACGTCGTGCAGGACCCGCAGCCAGGGCAAGTA
GGGCACGCGCCTCCTAGGGCGGTGCGAGCGGCGGAGACGCCGTTCATCAT
CATGCGGGTCGCCTTGGCGTCGTACCGCACGGGACAGGGGGGAGAGGTGC
TCTTCGAAGTGCAGGCTTGGTGGGTGCTGTGGCAACCGGAGCAGCCATCG
CCGCTGTAGTCGGCCCGCCCCCGCACCGCAGGTACCCCCCCCCGCCAGCC
GGCTACATCTACGTCGTGCAGGACCCGCAGCCAGGGCAAGTAGGGCACGC
GCCTCCTAGGGCGGTGCGAGCGGCGGAGACGCCGTTCATCATCATGCGGG
TCGCCTTGGCGTCGTACCGCACGGGACAGGGGGGAGAGGTGCTCTTCGAA
GTGCAGATCACCATGAACGACGGCTACAAGTACGGTGTGCTGAGGCGCTA
CTCGCAGTTCGACCAGCTCCGAGAACGCGTTGCGCGGGTTATTCGCACGA
CGACCCCGCCCTTCCCCCCCAAGAGCAGCATCCGGAGCTCGACCGTGGGG
CTCGGACCGGCTGACTTGGAAGAGCGGCGATCACCATGAACGACGGCTAC
AAGTACGGTGTGCTGAGGCGCTACTCGCAGTTCGACCAGCTCCGAGAACG
CGTTGCGCGGGTTATTCGCACGACGACCCCGCCCTTCCCCCCCAAGAGCA
GCATCCGGAGCTCGACCGTGGGGCTCGGACCGGCTGACTTGGAAGAGCGG
CGACAAATGCTGCAGGCGTGGCTGCAGTCCCTCTGCACGGCGGCCTCCAC
CAACACCCCGGCCCTCCGCGTGCCCCTGTACGACTTCCTCGAGACGGCCT
CGTACTACCCGCCCGAAGCGCCCGTCACGTCGTCCGACCCGACCGCCGCC
TCCGCCCAGCACACCGCCGTGGCCACTCCCGCCGCCACCACCGCCACCAC
CGGCGTACCGGTCGCCGCTGCCTACGCCGAGGCCTTGCCCCCCGCCGCGG
GTACCAAGGGCGTCGGAGTTCCGTCCGCCGGCCCCCTGCCACCGAAGCCG
GACTCCGCCGGAGACGGCTGGGCGGTACCCCCGGAGTCGCGAGACGCGTC
CGACCTCAAGATGGCCATGGCCGGCCCGAGCGCGGCGGGAAAGCTTACCG
GAGAGCAGGCGGCGGTGGCCTTGAGGACGGGGACCGGGGCCGGGCAGGAG
GACTTGAGGGCCGTGTGGGCGCTGTCGGACATCGACCAGGACGGGATGTT
GGACCGCGACGAGACAAATGCTGCAGGCGTGGCTGCAGTCCCTCTGCACG
GCGGCCTCCACCAACACCCCGGCCCTCCGCGTGCCCCTGTACGACTTCCT
CGAGACGGCCTCGTACTACCCGCCCGAAGCGCCCGTCACGTCGTCCGACC
CGACCGCCGCCTCCGCCCAGCACACCGCCGTGGCCACTCCCGCCGCCACC
ACCGCCACCACCGGCGTACCGGTCGCCGCTGCCTACGCCGAGGCCTTGCC
CCCCGCCGCGGGTACCAAGGGCGTCGGAGTTCCGTCCGCCGGCCCCCTGC
CACCGAAGCCGGACTCCGCCGGAGACGGCTGGGCGGTACCCCCGGAGTCG
CGAGACGCGTCCGACCTCAAGATGGCCATGGCCGGCCCGAGCGCGGCGGG
AAAGCTTACCGGAGAGCAGGCGGCGGTGGCCTTGAGGACGGGGACCGGGG
CCGGGCAGGAGGACTTGAGGGCCGTGTGGGCGCTGTCGGACATCGACCAG
GACGGGATGTTGGACCGCGACGAGTTTGCCGTTGCGTGGTACCTGGCCCA
CCAAGCCGCGGCGGGCAACAAGCCGCCTGCTTCGCTTCCAGCCGACATCG
TGCCGCCTTCCAAGCGCCAAGCCGCACAGCACAGCTCGGCGAACCCGTTC
GGTTAGTTTGCCGTTGCGTGGTACCTGGCCCACCAAGCCGCGGCGGGCAA
CAAGCCGCCTGCTTCGCTTCCAGCCGACATCGTGCCGCCTTCCAAGCGCC
AAGCCGCACAGCACAGCTCGGCGAACCCGTTCGGTTAG
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