mRNA_E-siliculosus-1a_F_contig1398.2349.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1398.2349.1
Unique NamemRNA_E-siliculosus-1a_F_contig1398.2349.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: D7FP83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP83_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 8.800e-81
Identity = 143/166 (86.14%), Postives = 147/166 (88.55%), Query Frame = 1 
Query:    1 FAFRLVVGGLGWVWLRGYAIFRLFFKRKTVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPDIASDAGKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQLRQEVTDGATVLVQRRE 498
            F  R+V+G L  V L  YAIFRLF ++  VVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPDIASDAGKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIE GWSQSIWPLAMQLR       TVLVQRRE
Sbjct:   40 FDIRMVMGVLACVSLLAYAIFRLFVRK--VVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPDIASDAGKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIEPGWSQSIWPLAMQLR-------TVLVQRRE 196
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: A0A835Z738_9STRA (Pre protein translocase subunit Sec66-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z738_9STRA)

HSP 1 Score: 169 bits (429), Expect = 4.820e-45
Identity = 90/152 (59.21%), Postives = 111/152 (73.03%), Query Frame = 1 
Query:    1 FAFRLVVGGLGWVWLRGYAIFRLFFKRKTVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPDIASDAGKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQLRQ 456
            F  R+V+G L    L  Y  +RL+  +  VV  DDF ADLGISY DF++PDE+++YYEAKE      DA  LRN LLKRAIADIPII+R+Q EGPG+ N+YQQAMIG++EW A+Q AE +I EEIE VQ EA+EIE GW Q IW +A +LRQ
Sbjct:   49 FDMRMVLGALTLFGLLSYFAYRLYMNK--VVAGDDFIADLGISYADFELPDEIEEYYEAKEA--AGDDATALRNPLLKRAIADIPIIMRLQKEGPGMQNLYQQAMIGDREWQAYQAAEALIGEEIEQVQAEAEEIEPGWGQQIWRMASELRQ 196
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: A0A1Z5KHC6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHC6_FISSO)

HSP 1 Score: 110 bits (275), Expect = 3.170e-23
Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 1 
Query:   58 IFRLFFKRKTVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPDIAS-DAGK----------------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQLRQEVTDGATVLVQRRE 498
            I+ L  + K    EDDFFA+L     +  +P EVD+YYE K   + A  + G+                L  AL+KRAIADIP++  +Q E  G+  +Y Q+M   K+W ++Q+AE+++S+E+E V+ EADEIE GWSQSIW  AMQ  Q +     +  ++RE
Sbjct:   64 IYFLXXRAKXXXSEDDFFAELDGDKFNLKLPSEVDEYYETKAKCEAAGWEPGQPIKDPKDQQATQPQRLLAQALMKRAIADIPMVQHIQKESSGMNKLYSQSMCSVKQWRSYQQAESLVSQEVEEVRAEADEIEPGWSQSIWRQAMQYHQMLKQRHELEEKQRE 227
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: A0A7S3L5D8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5D8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.820e-22
Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = 1 
Query:   76 KRKTVVGEDDFFADLGISYKDFDMPDEVDDYYEAKEN-----------PDIASDAGK-----LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQLRQ 456
            ++K     DDFFA L     +  +P EVD+YY+ KE            P    +A       +  AL+KRAIADIPI+  +Q E PG+  +Y Q+M  EK+W A+Q+AE ++S E++ V+ E+D+IE GWSQ IW  AMQ  Q
Sbjct:   80 RKKDENDGDDFFASLDTEKFNLKLPSEVDEYYKIKEKCESAGWEPGSKPATPQEAANGPHRVMAQALMKRAIADIPILQHIQKESPGMNKLYSQSMCSEKQWRAYQKAEALVSAEVDEVRRESDQIEPGWSQMIWRQAMQYHQ 222
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: K0T2G4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T2G4_THAOC)

HSP 1 Score: 102 bits (255), Expect = 2.570e-20
Identity = 62/159 (38.99%), Postives = 86/159 (54.09%), Query Frame = 1 
Query:   13 LVVGGLGWVWLRGYAIFRLFFKRKTVVGEDDFFADLGISYKDFDMPDEVDDYYEAKE--------------NPDIASDAGKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQ 447
            ++VGGL         ++ L  KRK     DDFF++L     +  +P  VD+YYE K               N    +    L  AL+KR IADIPI+  +Q E  G+  +Y Q+M   K+W ++Q AE M+S E+E V+ EADEIE GWSQ++W  AMQ
Sbjct:   56 IIVGGL--------FLYNLLKKRKDNANMDDFFSNLDGDKFNIKLPSAVDEYYEVKAKCESDGWEPGQPMANGQPTNHHRLLAQALMKRCIADIPIVTHIQKESQGMNKLYSQSMCSVKQWKSYQAAEAMVSAEVEEVRAEADEIEPGWSQAVWRQAMQ 206
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: A0A448YU82_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU82_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.340e-19
Identity = 63/147 (42.86%), Postives = 86/147 (58.50%), Query Frame = 1 
Query:   55 AIFRLFFKRKTVVGEDDFFADLGISYKDFD--MPDEVDDYYEAKENPDIAS-DAGK-------------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQ 447
            AI  L + +K+   EDD+F+    SY+ F+  +P EVD+YY  KE    A  + GK             +  AL+KRAI DIPI+  +Q E  G+  +Y Q+M    +W A+Q AETM+S E++ V+ EADEIE GWSQ IW  AMQ
Sbjct:   56 AILYLLYLKKSRSNEDDYFS----SYEKFNIKLPAEVDEYYSVKEKCMKAGWEPGKPPTDKNPNGPHRVMAQALMKRAIGDIPIVTFIQKESAGMNKLYSQSMCSVSQWRAYQNAETMVSTEVDEVRAEADEIEPGWSQVIWRQAMQ 198
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: A0A7S2S0P4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0P4_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 5.910e-19
Identity = 65/166 (39.16%), Postives = 90/166 (54.22%), Query Frame = 1 
Query:    4 AFRLVVGGLGWVWLRGYAIFRLFFKRKTVVGEDDF--FADLGISYKDFDMPDEVDDYYEAKEN-PDIASDAGK---------------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQ 447
            A  LV+G L  V      I+   + R++   +DDF  F+DL     + ++P  VD+YYE K+   D   + GK               L  AL+KR IADIP++  +Q E  G+  +Y Q+M   K+W  +Q AE M+S E+E V+ EADEIE GWSQ IW  AMQ
Sbjct:   50 AIYLVLGVLAMV-----LIWYFLYSRRSKKDDDDFAFFSDLDGEKFNLNLPAAVDEYYEVKDKCEDNGWEPGKPPTNQQEAASGPHRVLAQALMKRCIADIPLVTHIQKESAGMNKLYSQSMCSVKQWKTYQAAEAMVSAEVEEVRAEADEIEPGWSQVIWRQAMQ 210
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: A0A1E7F2C2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F2C2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.370e-18
Identity = 60/141 (42.55%), Postives = 85/141 (60.28%), Query Frame = 1 
Query:   73 FKRKTVVGEDDFFADLG-ISYKDFDMPDEVDDYYEAKE----------NP--DIASDAGKLR---NALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQ 447
            +KR +   +D++F++ G  + K   +P EVD+YY  KE          NP  D +S  G  R    AL+KRAI DIPI+  +Q E PG+  +Y Q+M    +W A+Q AE ++S E++ V++EADEIE GWSQ IW  AMQ
Sbjct:   66 YKRSSRSEDDEYFSNYGKFNIK---LPAEVDEYYAVKEKCINAGWEAGNPPKDKSSVTGPHRVMAQALMKRAIGDIPIVTFIQKESPGMNKLYAQSMCSVSQWRAYQTAEAVVSTEVDEVRSEADEIEPGWSQVIWRQAMQ 203
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: A0A6U3U3N1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U3N1_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.990e-18
Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = 1 
Query:   61 FRLFFKRKTVVGE-DDFFADLGISYKDFDMPDEVDDYYEAKENPDIAS-----DAGK-------------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQ 447
            F ++++RK    + ++FF++L     +  +P  VD+YYE K   + A       AG+             L  AL+KR IADIPI+  +Q E PG+  +Y Q+M   K+W ++Q AE M+S E++ V+ EADEIE GWSQ IW  AMQ
Sbjct:   63 FFIWYRRKKAQDDSNNFFSELDGEKFNLKLPAAVDEYYEVKAKCEEAGWEPGQGAGQGAAAANANGPHRVLAQALMKRCIADIPIVTHIQKESPGMNKLYSQSMCSVKQWRSYQAAEAMVSAEVDEVRAEADEIEPGWSQVIWRQAMQ 210
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BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Match: A0A7S1E5I0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E5I0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.630e-18
Identity = 61/169 (36.09%), Postives = 89/169 (52.66%), Query Frame = 1 
Query:   67 LFFKRKTVVGEDDFFADLGISYKDFDMPDEVDDYYEAKEN-------PDIASDAGK----------LRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAMQLR--------QEVTDGATVLVQRRE 498
            LF  +K+ V  +DFF +L     +  +P  V++YY+ K+        P  A   G+          +  AL+KR IADIPI+  +Q E PG+  +Y Q+M   K+W  +Q AE ++S E++ V+ EADEIE GWSQ IW  AMQ          QE    A   V+++E
Sbjct:   29 LFRPKKSEV--EDFFDELDGDKFNLKLPAAVEEYYQVKDKCLDAGWEPGTAPTPGQQQAANGPHRVMAQALMKRCIADIPIVTHIQKESPGMNKLYSQSMCSVKQWRTYQAAEALVSGEVDEVRAEADEIEPGWSQVIWKQAMQYHNMLKQKHEQEAQQVAAAAVKKKE 195
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP83_ECTSI8.800e-8186.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z738_9STRA4.820e-4559.21Pre protein translocase subunit Sec66-domain-conta... [more]
A0A1Z5KHC6_FISSO3.170e-2339.63Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3L5D8_9STRA4.820e-2241.26Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
K0T2G4_THAOC2.570e-2038.99Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A448YU82_9STRA1.340e-1942.86Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2S0P4_9STRA5.910e-1939.16Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7F2C2_9STRA2.370e-1842.55Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A6U3U3N1_9STRA4.990e-1839.19Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1E5I0_9STRA5.630e-1836.09Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1398contigE-siliculosus-1a_F_contig1398:26572..33172 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size546
Model size1796
Exons6
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2BH0U@1,2S501@2759
EggNOG free text desc.Preprotein translocase subunit Sec66
Seed eggNOG ortholog2880.D7FP83
Seed ortholog evalue5.8e-52
Seed ortholog score210.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1398.2349.1prot_E-siliculosus-1a_F_contig1398.2349.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1398 27678..30646 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927910.0183613-UTR-E-siliculosus-1a_F_contig1398:26571..276771622927910.0183613-UTR-E-siliculosus-1a_F_contig1398:26571..27677Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1398 26572..27677 -
1696318733.3351493-UTR-E-siliculosus-1a_F_contig1398:26571..276771696318733.3351493-UTR-E-siliculosus-1a_F_contig1398:26571..27677Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1398 26572..27677 -
1622927910.0815306-UTR-E-siliculosus-1a_F_contig1398:30646..307041622927910.0815306-UTR-E-siliculosus-1a_F_contig1398:30646..30704Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1398 30647..30704 -
1696318733.3911443-UTR-E-siliculosus-1a_F_contig1398:30646..307041696318733.3911443-UTR-E-siliculosus-1a_F_contig1398:30646..30704Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1398 30647..30704 -
1622927910.0928826-UTR-E-siliculosus-1a_F_contig1398:32682..326961622927910.0928826-UTR-E-siliculosus-1a_F_contig1398:32682..32696Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1398 32683..32696 -
1696318733.4000711-UTR-E-siliculosus-1a_F_contig1398:32682..326961696318733.4000711-UTR-E-siliculosus-1a_F_contig1398:32682..32696Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1398 32683..32696 -
1622927910.1058805-UTR-E-siliculosus-1a_F_contig1398:33100..331721622927910.1058805-UTR-E-siliculosus-1a_F_contig1398:33100..33172Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1398 33101..33172 -
1696318733.409034-UTR-E-siliculosus-1a_F_contig1398:33100..331721696318733.409034-UTR-E-siliculosus-1a_F_contig1398:33100..33172Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1398 33101..33172 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927910.0313468-CDS-E-siliculosus-1a_F_contig1398:27677..278941622927910.0313468-CDS-E-siliculosus-1a_F_contig1398:27677..27894Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1398 27678..27894 -
1696318733.3456838-CDS-E-siliculosus-1a_F_contig1398:27677..278941696318733.3456838-CDS-E-siliculosus-1a_F_contig1398:27677..27894Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1398 27678..27894 -
1622927910.048671-CDS-E-siliculosus-1a_F_contig1398:29317..294431622927910.048671-CDS-E-siliculosus-1a_F_contig1398:29317..29443Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1398 29318..29443 -
1696318733.3645046-CDS-E-siliculosus-1a_F_contig1398:29317..294431696318733.3645046-CDS-E-siliculosus-1a_F_contig1398:29317..29443Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1398 29318..29443 -
1622927910.0582693-CDS-E-siliculosus-1a_F_contig1398:30100..302411622927910.0582693-CDS-E-siliculosus-1a_F_contig1398:30100..30241Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1398 30101..30241 -
1696318733.3736029-CDS-E-siliculosus-1a_F_contig1398:30100..302411696318733.3736029-CDS-E-siliculosus-1a_F_contig1398:30100..30241Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1398 30101..30241 -
1622927910.0697374-CDS-E-siliculosus-1a_F_contig1398:30584..306461622927910.0697374-CDS-E-siliculosus-1a_F_contig1398:30584..30646Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1398 30585..30646 -
1696318733.3824155-CDS-E-siliculosus-1a_F_contig1398:30584..306461696318733.3824155-CDS-E-siliculosus-1a_F_contig1398:30584..30646Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1398 30585..30646 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1398.2349.1

>prot_E-siliculosus-1a_F_contig1398.2349.1 ID=prot_E-siliculosus-1a_F_contig1398.2349.1|Name=mRNA_E-siliculosus-1a_F_contig1398.2349.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=182bp
MPDEVDDYYEAKENPDIASDAGKLRNALLKRAIADIPIILRMQNEGPGIY
NMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIETGWSQSIWPLAM
QLRQEVTDGATVLVQRREQAEAAAEKKADEEAEAAAAKNKKAAGGGGKKA
AASATAAKKVPAAAAAAKKDDGSDDEMPAID*
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mRNA from alignment at E-siliculosus-1a_F_contig1398:26572..33172-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1398.2349.1 ID=mRNA_E-siliculosus-1a_F_contig1398.2349.1|Name=mRNA_E-siliculosus-1a_F_contig1398.2349.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6601bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1398:26572..33172- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTCGCTTTCCGGCTGGTGGTGGGGGGCCTGGGGTGGGTGTGGTTGCGGGG
GTACGCGATATTCCGGCTCTTCGTACGCAAGGGGGCCCCCCCCCCCCCCC
CCCAACAACAGGGCACACGAGAAGCTTGGTTCGCTGTTTATTTGCCGAAT
CCTGTAGCGAATGGTCCAACAACCGCGAGTAGTACCTGGGCCGGCTCTCG
CCCCCAGTCAGGGTTGCATGAGATGTACACCCCCCCCCCCCTCGGTATAC
ATTGCGCTAGGTGCCCTTGCCGCAGCAGTCTGCTGGTCGCAGGCTTCAGC
GGCCCTTGCAGTTGCTGCTTGCTGCCACCCGTTGGTAATTTTCCTTTTCG
TTTCGGCGGCGTTGGTGCTTGTCTCTGGACAAGCAGTACGTCTTGTACCT
TTCCCTCTTGTTCTAGGCGCCGTCGGTGCCTGTCTCGAGGAGACAATCAC
CAGAGACAGGCACCAACGCCTCCTAGTTCAAGAGGAAAACGTGCACGACG
TACTGCTTGTCCAGAGACAAGCACGAACGCCGCGGACACGAAAGGAAAGT
TACCAACGGGTGGCAGCAAGCAGCCACTGTAAGGGCCGCTGAAGCCCGCG
ACCAGCAGACTGCTGGGGCAAGCGCAAATAGCGCAACGTAGAAAAGGAAA
GTGAGTGGGAGGGAGGTGAGAGGAGAGGATTCGGCGCCGCGGTTTGCCGC
TTCCGATGAGCAGGCGGTCATCTCCGACAGACAAAAACGTCGGCATTGCC
TTTGTGGCAAGCCCTTCCTTTGCCTGCCGTTGGTGATATGACGTAAGGTA
TCACACCCGCTGGATTGGTTTTCACAGCTCCATAACTCCACGATGAAAAG
GATGTTTAAGTCAAGCGATACGTTTTGGAGAGGCTCTCGACGACACGGTT
CCAACGCCGCCATTCTCTGCACCGCCACTCTTTGTTGGGGATTCGAGCTT
TGAAAATCAGCCCAGGAGGTATCTTGTGTCACCTACGTTACCTGTGCTTG
TCTGTGTACCCGTAGACATGGCGGTGGCAAGCTGCCGAATAGTATTCTAC
CGTGGGTCATGCTGCGGATGAGTAGTTCGTTGTGTTGATCGGAAAATAGT
GACATGCAAATGGACGGAGCGACTATCGAGTGTGTTATCCCTTCTGTGTG
CTACCGCCTCCCTTGGGGACGTGATTGGCCTGTTGTGTTTGTCCATGAAG
TTGCGGACATGTACTTGTAGGGAGTCAAAATGTCATTTTTAACGCCCCTC
TGTGTGGTCTTGTGTGTCACGGTGATGGTGGTGGCGACGGTTGGCTTGTT
GTGGCCGGTAATATTGTGCCAAAATCGAACCTCAATATCAAGCCCTGGTC
GAACGACAATTCAACAACGGCCAGGCATTACTTCGATGTACCAATTTTGA
TTTCCCGACATGGAAAAAATGTCCTTCCAGGAATTCTAATTTCATTTCTT
ATGTCCTGCCAACCGAACCGATTCTGAGTGTCGGTTTTGTCGATGGTGAC
GGTTGGACCTTCGTTAATACGGTACTACCGAAGATCCAAAATTCAATATT
CAACATCCACAACATCCAAGCTCAACATCGGTTTCGTTGACCGAAATGAA
AACATAAAAATAATGAAAGAACAGCAGTCCTCGGAGGACTTTTTTTGCAA
TTGAGGAAATCAAAAGTTGATCTCTGCCCCCCCCCTTTATTAGGTCTTGG
ACCGATCAGAGCTCGGTTTTGGTTGTTGATATTGCATTTTGGCACCTCGC
AGATATGTACCCGGCCTTACGGTGGTCGAGGAAGACGACTGTTCAGCACA
TCTGGTATCAGCTCATCATGCCCCCCCCCCCCCCACTCACACACCTTAGT
GTAGTTTTGCGTGTCGCTGTGATTGTGGCCACGGTTTGTTCCTTGGGGGC
GGTAACAACGTAATACGAGGTGCAAAATTCCATCTCAAAAATCATAATCA
AGCTCTGATTGGTGGTAGGACAATGTACGAAAAAATAAAGGACATTTATG
CATCAATGTTGGTTTCCTGACTTCGAAAAGTTAAGCCAATCGAGGAGTTT
TGCTTTCATTTTTCATTTCCTGCCAACGAAACTGATGTTGTCTACTAGAT
TCTTTCGATGTTGATTTTTGTACCATCGTTAATACCCGGCTTCGTATTGA
CGAAGGTCTACAATCAAAATCGAAAAAATCCAAAATCGCAATCGGCTCCG
TTGACGGGAAATGAAAAATGAAACTAGAAGACCTCATGACTTTTTTCAAA
GCCAGGAAATCGAAATTGATGTCTGCCTTGTGTTTTTCGTGTCTACGACC
AATCAGAGCTCGTTAATACCTGGCCAGGGTCGCTTGCGTGTCGCGGTGAT
GGTGGTGGCGACGGTTGGTTCGTTAGGTTGGGCCGGGGAAGACGAGATTA
TTCGGAAATGTATGCAAGGAGGTTGAGATCGTTGTTCATCCCCCCCCCCA
ATCATGTCGCTGTGTTAGGGTTGTCGGAGAGGACGACTTTTTCGCAGACC
TGGGCATCAGCTACAAGGACTTCGACATGCCTGACGAGGTGGATGACTAC
TATGAGGCGAAGGAGAACCCGGACATCGCTAGTGACGCGTGAGAAGAAAA
GAGAAGAGAAGAGAAGAGAAGAGAAGCAAAGAAAAGATAAACTTGCAATG
TCGTCTTGTACTGCAAGGGAATTGGCCGGCCTTGTACCGAGCACCCGACA
CTATCCAGAGGATGAGACAGCTGGCATGTTCCGTCTGCGGCAAGATATTT
CACCAGCCTTGTATTGTATCACGAGGACGGCCAGCCTTATTTGTGCGACC
TTACGCAAAGATCACTACTGGTATGCAATACTGCCCCACGCCATAGCGCC
ATGTCTCCAGCTCACGCTTTCTGATGGCTTTCTTCCCCTCCCCTCTCGTT
CCCACGCTTTCTTTCACCTCCTGTTTCTCAGCGGTAAGCTGCGGAATGCG
TTGCTGAAGCGAGCAATCGCTGACATCCCCATTATCCTGCGCATGCAGAA
CGAGGGGCCAGGCATCTACAACATGTACCAGCAGGCGATGATCGGGGAGA
AGGAGTGGCACGCCTTCCAAGAGTGAGTAGAAACCCGTCATCACGTTTTT
CGGAACAATAATACACAGGTACAGTGGGTCCTGTTCTTCAGAAGAAAAGA
AGTACCATCAGCAGTAGGTTGTTCGTCATGTTTGTCGCATGGAATAGAAC
GCAGCACAGTAGACGTTGTTGGTCATGTTTTTCAGGAAAAAGGACACAAG
TATTAATACAAAGTAAGCTGTTCTTGTTGCTCTCTGGACTGCTGCTTTTT
GAGTGGTTTTGGTTTCGGAGATGGATTCCGATTACCACAGAATTGCCTCG
CAAGTTAGAGGGACAGTCCCTGTCATGCGCAACGCCTTGTCAATTTCACT
TCTGTGCTCCTCGGGCCCAGATCTTCTGCATCAGAAGCACGATACGCTGC
GTATCAAAGTTAAAGCCCTCTATCGGGTGTAGCGGAGAGCAATTGAGCAC
GTGCCAGTACAAGACACACACCTTTTTTCCAGCAGCAGCTGGCACCGGTG
GTTACGACCCTCCTCCCTTAATGGCGTCACTTCCATCGTGTGACGAACAA
CCCCCTTGGCACGGTATTGTAGCACCACCACCACCAACCAGCGCTTGCCA
TGATCCGCATCGCTTCGTTGACAACCTTTTTTTCCCTTTCGCTCTTGCTT
GCTGGTGTGGTTTGTTTCTGTGCACGCAGGGCGGAAACGATGATCTCGGA
AGAAATCGAGTCGGTGCAGAACGAGGCGGACGAGATCGAGACGGGCTGGA
GCCAGTCCATCTGGCCCTTGGCGATGCAGCTCAGGCAAGAGGTTACAGAC
GGAGCGTGAAGAGAGACAGAGATAGATAGACAGACAGACAGACAGACAGA
CAGACAGACACGTCGCTTCCTGCAGGAACCGACGACATCTTTCCGCTGCT
GTAAACTCGTAGGATCGCGAGCAGGTAAGTTTAAGCTGTGGGTTGACCGG
GGTTCTAGCAGCTCAACAATGTCATCGACTCCTGCTGGAACGGCCGCAGA
GTGGTGTTTTTCCTCTCGCCCTCCTCGCGGAACATGCCGGTCATGGGTTC
GATAACCGGCATGATCCGGGCTGACGGCGAGGTGGAGGACACGATTTTGC
GTCGCTTCCTGAAGGAACCCATGACGTGTTCCCGCTGTTGTAAGCTCGTC
AGATGGCGTACAGTTGATGTGTGAGTCGACCGGAGTTGTTGCAGCTTAGC
AATGCCGTGGACTCCTGCGGGAATGAGCGCAAAATCGTCTACTTGATGGT
ACGTCCTCGCGGATCATGTCGGTTATCGCATGCCGGTTATGGGTTCGATA
ACCGGCATGATCGGGACTGACGGTGATATGAAGTATTCCAGTTTTGCGTC
GCTTCCTGCAGGAGCCGATAACATATTTTCCGCTGCTGTAAACACGTCAG
ATCGCGGTTGGGTAAATTTGATCTGTGCGTCGACCGGAGTGCTGCTTTAC
CGTGCTCTCTCCCCTTTTGAGAAACGCCAACTATCGTCTCTATTCTTCTG
TGAGAAGCACCCGTCTACACACCTAATTTTGTGTTTCGTGAACTTCAATA
GCACAATCTGTTTTCACCTGCTTGGTTCGAAGACAGCAAAAAGGCGTATG
TACGTGACGTGATTTTGATGTGGCACAATTTTTGGTGTTTGAAGCGCTTA
AGGTCGGACATTTATCGCCGCTATGCGTCCCGCACTGGGAGTGCTCGTGA
ACTACCGGTAGGAAAAGCCTTCAAGGCAAGCTTGTCCCAGATGCCCCAAG
CGTTTTCTAGGGACCCCCCCTACGGCGGGGCAACAGGAGCAAGCGAGTTT
GGTGCCTCCGCCCGCCGCCTGCTCTTATCTGGGCTGCCAGTTTGTCGGCC
CCCGTCACTGTCGCTCATATTGAGAATGTCGCGAGACGAGGAATTGGCAG
GACAGATAAGAGTAGGCGGCGAGCGGCGGCACCAAGCTCACTTACTCGTG
TTGCCCCTCCGTACCGTGGGTCCTATTCACGTCCGAGGACATCTGGGACA
AAAAAGCCAAGCCTCGGCTTTGGTAGCTCGGCCCATTGTAGCTAGCGGTC
TTCGCCCAAAGCTATGATATTGATATGGAATCGCTGCGGTGAACCCGTGA
ATCGCACGCACAGGTGTAAACACATAACACCCGACGATCCTACAATTGTG
TACTAACTATTTTTTTCTCTCTCTCTCTCGCTCTGTTGTTTCTCGTTTCG
CCAACACGAACGAAACACTTGAATGCAGAACTGTGCTGGTTCAACGAAGG
GAGCAAGCAGAGGCAGCGGCGGAGAAGAAGGCGGACGAGGAGGCAGAGGC
GGCAGCAGCAAAGAACAAGAAGGCCGCGGGGGGAGGGGGTAAGAAGGCGG
CCGCATCAGCGACAGCAGCAAAGAAGGTGCCGGCGGCGGCAGCAGCGGCC
AAGAAGGATGATGGCAGCGACGACGAAATGCCGGCCATCGACTAAACATC
CCCTGTTGTCGTATCCCTAGTTCCTTATCGTGCTCACAATGAGGGTTAGG
TGGCAGGTGCCACGTACCACAGCTTTGTGAGGGAGTAATTATGTCAGCTC
TGCCGAGAGGGGATACATGGGGTAGGGCCTACGTTTTGATATGGACATTG
CTGGTGGTGGTTGTCGACGCGTTGTTGTGTGTTGTCTTCTGTCGTCTTCG
GTTTGTTGTGCGTCTTGCCGATTCGAGTGGTATAGGCTAACCGAGCTGAC
CTGATTATTTGTGAGCGCCAGCTATTGTCGCGCCCTGGTGTTCTAGGTTC
AACCTCTCACGATCGTGTTCATGATCGATCGCATCCAATGGTATGTATTG
ATCGTGTTCATGATCGATCGTATTCAATGATATGTATGGATCGTGTTCAC
GATCGATCGTATTCAATGGTATGTATTAGGAGGCGTTTTCTTGTCTATCA
AGAAGTCAAGAAGAATAGACGTGAAGGGTTGGAAGTAGCAATGCCGTCGA
CGACTAGCGATGTCGTGTCCTCAAACTGTCTTCTTTCTTACGGTCGTGGT
CAGGAAGAGTGTAAGAAGGCGTTTTTTTGCCAAGTAGTGTACAGCGGCAT
GTTTTTAGAGGGGGGCACGCGAACGGTTGGAAATGTCAAGCCGTCGACGA
CGAGCGCTTCTTTCGATGCAGACATGTGTCTTCCATACAAGAACATAGAT
GTATCGTGATGTGTTGGGGTTTGGTCGTGCCCAACCTACCTTAAGAACGG
CTTTGTCACTTTGTGTGACACGCAGAAAATGTGATGATGTAGGTGCTGCC
AACTCGCTGAAGGCCACGGGTAAGGAAGAAAAAGTAATGGCAAGGAAGAA
CCAGACCACGATCTTCTTCTGTCACACCGATCGATGTGTGTACACGGCTG
GCTCCCGTTTTCACCTTCCCGGATCGCTTTTTCCGGTCATGAAGAAATGT
TCAGATGCGTGCTGGGCCTTTTCTCGAAACCTCAGGCAAGAAATTTGCGG
CATGTCTTTGACCTGTTTCTTGCCCTCTCCGCTCCCTGGAATTCTCCGTC
AGGGTATGTTCAAGTCTTTACGTCGTGAGTTTTGAGGGAAATCTGCTGGA
T
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1398:26572..33172-

>mRNA_E-siliculosus-1a_F_contig1398.2349.1 ID=mRNA_E-siliculosus-1a_F_contig1398.2349.1|Name=mRNA_E-siliculosus-1a_F_contig1398.2349.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1092bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1398:26572..33172- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCTGACGAGGTGGATGACTACTATGAGGCGAAGGAGAACCCGGACAT
CGCTAGTGACGCATGCCTGACGAGGTGGATGACTACTATGAGGCGAAGGA
GAACCCGGACATCGCTAGTGACGCCGGTAAGCTGCGGAATGCGTTGCTGA
AGCGAGCAATCGCTGACATCCCCATTATCCTGCGCATGCAGAACGAGGGG
CCAGGCATCTACAACATGTACCAGCAGGCGATGATCGGGGAGAAGGAGTG
GCACGCCTTCCAAGACGGTAAGCTGCGGAATGCGTTGCTGAAGCGAGCAA
TCGCTGACATCCCCATTATCCTGCGCATGCAGAACGAGGGGCCAGGCATC
TACAACATGTACCAGCAGGCGATGATCGGGGAGAAGGAGTGGCACGCCTT
CCAAGAGGCGGAAACGATGATCTCGGAAGAAATCGAGTCGGTGCAGAACG
AGGCGGACGAGATCGAGACGGGCTGGAGCCAGTCCATCTGGCCCTTGGCG
ATGCAGCTCAGGCAAGAGGTTACAGACGGAGCGGCGGAAACGATGATCTC
GGAAGAAATCGAGTCGGTGCAGAACGAGGCGGACGAGATCGAGACGGGCT
GGAGCCAGTCCATCTGGCCCTTGGCGATGCAGCTCAGGCAAGAGGTTACA
GACGGAGCAACTGTGCTGGTTCAACGAAGGGAGCAAGCAGAGGCAGCGGC
GGAGAAGAAGGCGGACGAGGAGGCAGAGGCGGCAGCAGCAAAGAACAAGA
AGGCCGCGGGGGGAGGGGGTAAGAAGGCGGCCGCATCAGCGACAGCAGCA
AAGAAGGTGCCGGCGGCGGCAGCAGCGGCCAAGAAGGATGATGGCAGCGA
CGACGAAATGCCGGCCATCGACTAAAACTGTGCTGGTTCAACGAAGGGAG
CAAGCAGAGGCAGCGGCGGAGAAGAAGGCGGACGAGGAGGCAGAGGCGGC
AGCAGCAAAGAACAAGAAGGCCGCGGGGGGAGGGGGTAAGAAGGCGGCCG
CATCAGCGACAGCAGCAAAGAAGGTGCCGGCGGCGGCAGCAGCGGCCAAG
AAGGATGATGGCAGCGACGACGAAATGCCGGCCATCGACTAA
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