mRNA_E-siliculosus-1a_F_contig1398.2347.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI) HSP 1 Score: 1743 bits (4515), Expect = 0.000e+0 Identity = 980/1201 (81.60%), Postives = 988/1201 (82.26%), Query Frame = 1
Query: 1 MGSLIDQTEGALARVLSLCSSGPVGEHDVDALQRHDEEALALLDINDDDAIKALGPWIKCLEAWSRKPKPSQGREEGPWTTVTQPCTAVLSRAEPSPETPPPAPGTPPLAAHKALTVILFRAMLLGEETEGSPHRNPSLAAWAAARAYLLMLSLPGAAPYGVLQSAVLGMVLTNLRSWCRNSGVYRPGGGGAPGVXXXXXXXXXXXXXXXXXGKDAEEGEDGDSXXXXXXAGPRGVGRXXXXXXXRGSGGEVLACLELLKSCLACVSLESHQDLVVKLSEVLVGVSVVAAIEGPASLADLASASMVGLVTGASSHTEVVQGVVLQALMPVILMTTGKADVPPRSRDSVKAHNSAVDTAKAIAAALRNAAPKNGYKTRGGTPSTPGQSTDVLSEGGLASQSPSATTPAGXXXXXXXXXXXXXXXXXXXXGPVVVVGKKGDGXXXXXXXXXXXKPVLTLLQHLCVSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWAADDSSRANGSGEGAAVSTPRAIGDGDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLSGIQGRRSGYKGGAFRQAVMEACGWGEAGMERRHDGPLLETIRTRVEDEKANVRRNAVPALEAILKLSPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQNRLVEIVRTVLIDRVVEWHKTEADTGKNKGKGGSTNSSTSSNRPTRGVSTSVNDDGETGEEPAVAAAGETNAGGVSSVWPLLAKAGQGGAHKSLKKAVSTLMQQNGSTGFKVAPILRALRAAAVMALPPKTSQDSAAVATGGDVGGESHDQERAKEVQEEESWTVEDMRLISLAEKLPRASLTTIRRGTWVLLEAFLDRAPSAGDSSGKEQQQQQSDMDPMFVVRCWNRIRVHILEEALSGPEDANVSSPGSGEAFEADGRRVLGVLARLAGSVPPDVAMPLAESLLEMLQDLVATPETSAALVAALHMLCFAQATTEEAGAAMCNEWANSALTKFEQLLDVFVYQGSEALRDHSGARACGFDMAILVERLIFAVGEVALVGFTSKEDAAGPSDPQAPGAGKKSVEVTARPTASPRLVELVQVLLPPRLPTSAHGVEEGEEGPETPSPVRALAFVTLG 3603
MGSLIDQTE ALARVLSLCSSGPVGE DVDALQRHDE ALALLDINDDDAIKALGPWIKCLEAWSRK +QG EEGPWTTVTQPCTAVLSRA+PS ETP GTPPLAAHKALTVILFR MLLGEETEGSPHRNPS AAWAAARAYLLMLSLPGAAPYGVLQSAVLGMVLTNLRSWCRNSGVYRPGGGGAPGV GKDAEEGE XXX AGPRGVGR R SGGEVLACLELLKSCLACV LESHQ+LVVKLSEVLVGVSVVAAIEGPASLADLASASMVGLVTGAS HTEVVQGVVLQALMPVILMTTGKADVPPRSRD VKAHNSA+DTAKAIAAALRNAA KNGYKTRGGTPSTPGQSTDVLSEGGLASQSPSATTPAG XXXXXXXXXXGPVVVVGKKGDG KPVLTLLQHLCVSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWA DDSS A+GSGEGAAVSTPRA GD DGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLSGIQGRRSGYKGGAF+QAVMEACGWGEAGMERRHDGPLLETIRTRVEDEKANVRRNAVPALEAILKLSPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDE+LQKAWVSSVLPLAGDPEQTCQ TNAGGVSSVWPLLAKAGQGGAHK LKK ESWTVEDMRLISLAEKLPRASLTTIRRGTWVLLEAFLDRAPSAGDSSGKEQQQQ DMDPMFVVRCWNRIRVHILEEALSGP DANVSSPGSGEAFEADGRRVLGVLARLAGSVPPDVAMPLAESLLEMLQDLVATPETSAALVAALHMLCFAQATTEEAGAAMCNEWANSALTKFEQLLDVFVYQGSEALRDHSGARACGFDMAILVERLIFAVGEVALVGFTSKEDAAGPSDPQAPGAGKKS E+TARPTASPRLVELVQVLLPPRLPTSAHGVEEGEEGPETPSPVRALAFVTLG
Sbjct: 1 MGSLIDQTEAALARVLSLCSSGPVGEQDVDALQRHDEAALALLDINDDDAIKALGPWIKCLEAWSRKTNAAQGGEEGPWTTVTQPCTAVLSRADPSSETPXXXXGTPPLAAHKALTVILFRVMLLGEETEGSPHRNPSPAAWAAARAYLLMLSLPGAAPYGVLQSAVLGMVLTNLRSWCRNSGVYRPGGGGAPGVEGGGVGRKKGPQKRRR-GKDAEEGEXXXXXXXGDEAGPRGVGRCAAGGGGRWSGGEVLACLELLKSCLACVPLESHQELVVKLSEVLVGVSVVAAIEGPASLADLASASMVGLVTGASGHTEVVQGVVLQALMPVILMTTGKADVPPRSRDCVKAHNSAIDTAKAIAAALRNAATKNGYKTRGGTPSTPGQSTDVLSEGGLASQSPSATTPAGGGDDTSASPTXXXXXXXXXXGPVVVVGKKGDGDGQTGTGGDGGKPVLTLLQHLCVSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWATDDSSSADGSGEGAAVSTPRANGDADGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLSGIQGRRSGYKGGAFQQAVMEACGWGEAGMERRHDGPLLETIRTRVEDEKANVRRNAVPALEAILKLSPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDESLQKAWVSSVLPLAGDPEQTCQ---------------------------------------------------------------------TNAGGVSSVWPLLAKAGQGGAHKCLKK----------------------------------------------------------------ESWTVEDMRLISLAEKLPRASLTTIRRGTWVLLEAFLDRAPSAGDSSGKEQQQQHFDMDPMFVVRCWNRIRVHILEEALSGPGDANVSSPGSGEAFEADGRRVLGVLARLAGSVPPDVAMPLAESLLEMLQDLVATPETSAALVAALHMLCFAQATTEEAGAAMCNEWANSALTKFEQLLDVFVYQGSEALRDHSGARACGFDMAILVERLIFAVGEVALVGFTSKEDAAGPSDPQAPGAGKKSAEITARPTASPRLVELVQVLLPPRLPTSAHGVEEGEEGPETPSPVRALAFVTLG 1067
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: A0A6H5JQJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ4_9PHAE) HSP 1 Score: 926 bits (2392), Expect = 0.000e+0 Identity = 550/621 (88.57%), Postives = 555/621 (89.37%), Query Frame = 1
Query: 367 MLLGEETEGSPHRNPSLAAWAAARAYLLMLSLPGAAPYGVLQSAVLGMVLTNLRSWCRNSGVYRPGGGGAPGVXXXXXXXXXXXXXXXXXGKDAEEGEDGDSXXXXXXAGPRGVGRXXXXXXXRGSGGEVLACLELLKSCLACVSLESHQDLVVKLSEVLVGVSVVAAIEGPASLADLASASMVGLVTGASSHTEVVQGVVLQALMPVILMTTGKADVPPRSRDSVKAHNSAVDTAKAIAAALRNAAPKNGYKTRGGTPSTPGQSTDVLSEGGLASQSPSATTPAGXXXXXXXXXXXXXXXXXXXXGPVVVVGKKGDGXXXXXXXXXXXKPVLTLLQHLCVSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWAADDSSRANGSGEGAAVSTPRAIGDGDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLSGIQGRRSGYKGGAFRQAVMEACGWGEAGMERRHDGPLLETIRTRVEDEKANVRRNAVPALEAILKLSPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQ 2229
MLLG+ETEGSPHRNPS AAWAAARAYLLMLSLPGAAPYGVLQSAVLGMVLTNLRSWCRNSGVYRPGGGGAPGVXXXXXXXXXXXXXXX GKDAE GED DS GPRGVGR RGSGGEVLACLELLKSCLACVSLESHQDLVVKLSEVLVGVSVVAAIEGPASLADLASASMVGLVTGAS HTEVVQGVVLQALMPVILM TGKADVPPRSRD VKAHNSAVDTAKAIAAALRNAA KNGY+TRG TPSTPGQSTDV SEG LASQSPSATTPAG XXXXXXXXX PVVVVGKKGDGXXXXXXXXXXXKPVLTLLQHLCVSSPERAEGRARLAEGLA LLPELEE DR RFVVFLAK ELSSRLLTEDWPWA DD+S A+GS EG AVST RA G GDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLSGIQGRRSGYKG AFRQAVMEACGWGEAGMER HDGPLLETIRTRVEDEKANVRRNAVPALEAILKLSPAFS GRASAD GEAAIGKEHEADFELLQERCND+SLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQ
Sbjct: 1 MLLGKETEGSPHRNPSPAAWAAARAYLLMLSLPGAAPYGVLQSAVLGMVLTNLRSWCRNSGVYRPGGGGAPGVXXXXXXXXXXXXXXXR-GKDAEGGEDADSSDGGEETGPRGVGRRATGGGGRGSGGEVLACLELLKSCLACVSLESHQDLVVKLSEVLVGVSVVAAIEGPASLADLASASMVGLVTGASGHTEVVQGVVLQALMPVILMNTGKADVPPRSRDCVKAHNSAVDTAKAIAAALRNAATKNGYETRGATPSTPGQSTDVPSEGDLASQSPSATTPAGGGYDTSSSPXXXXXXXXXGGAPVVVVGKKGDGXXXXXXXXXXXKPVLTLLQHLCVSSPERAEGRARLAEGLAGLLPELEEHDRARFVVFLAK--------------ELSSRLLTEDWPWATDDNSSADGSREGPAVSTLRANGGGDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLSGIQGRRSGYKGAAFRQAVMEACGWGEAGMERGHDGPLLETIRTRVEDEKANVRRNAVPALEAILKLSPAFSSGRASADVGEAAIGKEHEADFELLQERCNDISLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQ 606
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: A0A6H5JKF8_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF8_9PHAE) HSP 1 Score: 407 bits (1047), Expect = 2.270e-121 Identity = 216/221 (97.74%), Postives = 217/221 (98.19%), Query Frame = 1
Query: 2941 ALSGPEDANVSSPGSGEAFEADGRRVLGVLARLAGSVPPDVAMPLAESLLEMLQDLVATPETSAALVAALHMLCFAQATTEEAGAAMCNEWANSALTKFEQLLDVFVYQGSEALRDHSGARACGFDMAILVERLIFAVGEVALVGFTSKEDAAGPSDPQAPGAGKKSVEVTARPTASPRLVELVQVLLPPRLPTSAHGVEEGEEGPETPSPVRALAFVTLG 3603
A GPEDANVSSPGSGEAFEADGRRVLGVLARLAGSVPPDVAMPLAESLLEMLQDLVATPETSAALVAALHMLCFAQATTEEAGAAMCNEWANSALT FEQLLDVFVYQGSEALRDHSGARACGFDMAILVERLIFAVGEVALVGFTSKEDAAGPSDPQAPGAGKKS E+TARPTASPRLVELVQVLLPPRLPTSAHGVEEGEEGPETPSPVRALAFVTLG
Sbjct: 3 APPGPEDANVSSPGSGEAFEADGRRVLGVLARLAGSVPPDVAMPLAESLLEMLQDLVATPETSAALVAALHMLCFAQATTEEAGAAMCNEWANSALTNFEQLLDVFVYQGSEALRDHSGARACGFDMAILVERLIFAVGEVALVGFTSKEDAAGPSDPQAPGAGKKSAEITARPTASPRLVELVQVLLPPRLPTSAHGVEEGEEGPETPSPVRALAFVTLG 223
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: A0A7S1ZLL9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLL9_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.140e-24 Identity = 173/683 (25.33%), Postives = 279/683 (40.85%), Query Frame = 1
Query: 1699 TMLDLVVARAADTAPTVRSKAASTLSEVLSGIQ-------------GRRSGYKGGAFRQAVMEACGWGEAGMERRHDGPLLETIRTRVEDEKANVRRNAVPALEAILKLSPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLR------------PSDET--LQKAWVSSVLPLAGDPEQTCQNRLVEIVRTVLIDRVVEWHKTEADTGKNKGKGGSTNSSTSSNRPTRGVSTSVNDDGETGEEPAVAAAGETNAGGVSSVWPLLAKAGQGGAHK----SLKKAVSTLMQQNGSTGFKVA-PILRALRAAAVMALPPKTSQDSAAVATGGDVGGESHDQERAKEVQEEE--SWTVEDMRLISLAEKLPRASLTTIRRGTWVLLEAFLD-RAPSAGDSSGK---EQQQQQSDMDPMFVVRCWNRIRVHILEEALSGPEDANVSSPGSGEAFEADGRRVLGVLARLAGSVPPDVAMPLAESLLEMLQDLVATP----ETSAALVAALHMLCFAQATTEEAGAAM--CNEWANSALTKFEQLLDVFVYQGSEALRDHSGARACGFDMAILVERLIFAVGEVALVGFTSKEDAAGPSDPQAP----GAGKKSVEVTARPTASPRLVELVQVLLPPRLPTSAHGVEEGEEGPETPSPVRALAFVTLG 3603
T+L + R D P VR++AA +LS+ L ++ G + +FR AV + +R G D++A VRR A+ A +L + +DG + K ++D +L C D S++TRKAA A++ LL R SD+T L W +SVLPL D E TC ++ +E ++++ +VE EA+ + T NR + W +L+K +GGA + SL+ A+ ++ + G + ++ P+L+ LR AV +L + DVG V ++ +++VE++ A K+ + R G W LL+A + D++G EQ + S +D F+ W + L + S PE + S +A R L V++RL +P A A +L ++L+ + ++ALV+ LC E C W N E L+ ++ S ++ G D L+ER IF VGEV++VGF + ED++ + G+G K +S RLV+L+Q +LPP LP V++ TP RA AF+TLG
Sbjct: 12 TLLKALEGRLVDRIPAVRARAAHSLSDALRNLELLDADPSTSDDVNGTNTRMAVDSFRDAVANIAPGLSLVLRKRASG-----------DDRATVRRAAISAWLGLLTTT--------KSDGEDVV--KLSQSDVTVLGHLCGDPSVATRKAAAEAITLLLERRYDEEQTDFPLSSTSDQTSCLVSTWAASVLPLVIDAETTCASKAIEHFSKIILEPIVEVGGKEANWS----------NLTEKNR-------------------------------YLTAWRVLSKVSEGGAARGGVGSLRSALKKILDEKGDSHKSLSKPLLQELRRVAVWSLGLGGRESL-------DVG-----------VNDDSILTYSVEEL----CASKIFDEKVEVQRVGAWCLLDALTQCDSKQQKDTTGVFSLEQSVRSSRIDASFLSLSWEK-----LHKLSSSPETPSSSR----DAIFTTSRACLRVISRLGSFIPIPEAKKSAITLRKLLESFLMPMGLIGSATSALVSLTKRLCNNDGLDETNSDVYQACTTWINEINRNCENKLEAYI--SSTENSNNEVIATAGRDDIRLLERAIFTVGEVSMVGFATDEDSSSKEFSKQTNLQEGSGSKDPVRGLHVQSSNRLVQLIQTMLPPTLPK----VDDASVERRTPKTARAYAFITLG 595
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: A0A6P8I066_ACTTE (condensin-2 complex subunit D3-like isoform X1 n=3 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I066_ACTTE) HSP 1 Score: 115 bits (287), Expect = 5.060e-22 Identity = 88/313 (28.12%), Postives = 149/313 (47.60%), Query Frame = 1
Query: 1360 VLTLLQHLCVSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWAADDSSRANGSGEGAAVSTPRAIGDGDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLSGIQGRRSGYKGGAFRQAVMEACGWGEAGMERRHDGPLLETIRTRVEDEKANVRRNAVPALEAILKLSPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQNRLVEIVRTVLIDRVVEWHKTEA 2298
V L+QHLC P++A+ R +A+ +L L + + ++ K S++AK+ +R F+++ S LL ++ P+ D + LT + +LD+++ R +D APTVR+KA LS+ ++ G K ++A+ E E G + IR R DEK VR+ A+ ALE+++ L + + D +L +RC D +LS RK AM +L++LL +PSD LQ W+ ++ PL D E T Q + I+ V++ ++V H++ A
Sbjct: 372 VRVLIQHLCTKCPDKADYRVLVAKAAVDVLKSLPDKSYSSLMEWITKYSKNAKMSYRVFALDFISELLLQE--------------------KRPKNQVQTDQETQVLTTK--KVLLDILIGRCSDRAPTVRAKALQHLSQSIT--SGDAELVK--LVQEALKEPLDKSVNSNEIHTVGSM---IRKRTCDEKVGVRKAALQALESVVHLD----------------LSCLKKPDVMMLHDRCMDPALSVRKQAMVSLTALLQEQPSDTVLQSLWLDAIFPLVLDRETTAQEKCYSILEDVILSKIVPLHRSIA 639
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: B8LBX8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBX8_THAPS) HSP 1 Score: 114 bits (286), Expect = 6.950e-22 Identity = 198/796 (24.87%), Postives = 316/796 (39.70%), Query Frame = 1
Query: 1357 PVLTLLQHLC-----VSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWAADDSSRANGSGEGAAVSTPRAIGDGDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLSGIQGRRSGYKGGAFRQAVMEACGWGEAGMERRHDGP--------LLETIRTRVE-DEKANVRRNAVPALEAILKLSPAFSGGRASADGGEAAIGKEHEADFEL-------LQERCNDMSLSTRKAAMGALSSLLMLR-------PSDETLQKAWVSSVLPLAGDPEQTCQNRLVEIVRTVLIDRVVEWHKTEADTGKNKGKGGSTNSSTSSNRPTRGVSTSVNDDGETGEEPAVAAAGETNAGGV--SSVWPLLAKAGQGGAHKSLKKAVSTLMQQNGSTGFKVAPILRALRAAAVMALPPKTSQDSAAVATGGDVGGESHDQERAKEVQEEESWTVEDMRLISLAEKLPRASLTTIRRGTWVLLEAFLD-RAPSAGDSS-----GKEQQQQQSDMDPMFVVRCWNRIRVHILEEALSGPEDANVSSPGSGEAFEADGRRVLGVLARLAGSVPPDVAMPLAESLLEMLQDLVATPETSAALVAALHMLCFAQATTEEAGAAM---CNEWANSALTKFEQLLDV-FVYQGSEALRDHSGARACGFDMAILVERLIFAVGEVALVGFTSKEDAAGPSDPQAPGAGKKSVEVTARPTA-------SPRLVELVQVLLPPRLPTSAHGVEEGEEGPETPSPVRALAFVTLG 3603
P+L+L+ + ERAE R+R+ L +R + + F+ + S HR VEL +L +W W +D ++ N + + TP D + + +L + R D +PTVR++AA LSEV ++ + G +E + + + L++++R R D++A VR+ A+ A +L L+ ++++ADF + L CND S++TRKAA AL+ L+ P L+ AW +VLPL D E TC + VE +++I+ +VE + A+ K K GS+ + R VS S + G G N G +++ L AG KSL K + + Q G+ + L +TSQDS SHD E L + L ++R G W LL+A ++G SS Q + S++D F+ ++R L + P D R L V+AR+ VP D A LL L + + +A V AL L + +E+G + C EW LT E ++ F E + G D L+ R++F VGE+ +VGF+S+E+ P G+ + + T R S ++++LV+++LP LP + E TPS +RA AF+TLG
Sbjct: 607 PILSLIMGMLHKLFTTKGLERAETRSRVCALGVLCLSHFPSMERTQMIKFVGDMCESKISSHRMLGVELIGEILCTEWYW--EDVAKEN---KKNGLITPFEKDDEENKMVSSST----VLLAALQGRLTDKSPTVRTRAAMALSEV---VRKANVAQEEGMTLDGDVENTPMSDVAVSSKVLNEALCSIGTGLVDSLRRRASTDDRATVRKAAIIAWLQMLSLAQ-----------------RKNQADFVVSNLDVSALCTLCNDASVATRKAAADALTKLVKANYDSDEYTPQASALEMAWAHTVLPLVSDVEVTCVTKAVEFFSSLIIEPIVELGRDTAE----KLKEGSSTRYLVAWRILSKVSDSCKEAG-----------GSRNGPGSLQTAIQKLFVNAGND--CKSLAKNLLRAVYQVGAIS---------------LCLDRRTSQDSLM----------SHDSE--------------------LEDDLFGIRTQSMRTGAWCLLDALTSCLTNTSGKSSVAANVSLSQAVRSSNIDSSFLALSLTKLRS--LSNSNEVPYDKRAG-------LVTTSRDCLRVIARMGSFVPLDDARACFSDLLNDLDSFNVSIDLISAAVGALVSLT--KRLCDESGKDVYTECEEWVGRLLTHCENAIEPSFSSVAKEGM--------VGEDEEQLLLRVLFTVGELNMVGFSSQEE------PAKQGSTRTNDLATEREPVRGLFVRPSHKMLQLVKLMLPNTLPMQS---STDNEMMPTPSTIRAHAFITLG 1283
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: UPI00077A6225 (condensin-2 complex subunit D3-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A6225) HSP 1 Score: 113 bits (283), Expect = 1.280e-21 Identity = 92/319 (28.84%), Postives = 148/319 (46.39%), Query Frame = 1
Query: 1360 VLTLLQHLCVSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWAADDSSRANGSGEGAAVSTPRAIGDGDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLSGIQGRRSGYKGGAFRQAVMEACG-----WGEAGMERRHDGPLLETIRTRVEDEKANVRRNAVPALEAILKLSPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQNRLVEIVRTVLIDRVVEWHKTEAD 2301
V L+Q +C PERAE R+ +A+ + ++ +L V ++ K S++AKI +R F+++L S LL S P G + L+ +LD+V+AR +D APTVR+KA ++ L+ F +A+ +A +G + G + IR R D+K VR+ A+ ALE+I++LS + +AD L +RC D +LS RK AM +L++LL +PS +Q W+ V PL D E T Q + +I+ VL+ + K+ +D
Sbjct: 205 VKVLVQVICTRCPERAEYRSIVAKAVIDIMDKLPVTLYASLVEWINKFSKNAKISYRIFALDLISLLLLRP------------------EKSCPMEYGTNENIKTLLSK---TYLLDIVIARCSDRAPTVRAKALQYFAQCLTSEDSSLVTNIKAHFNEAIEKATDSTPTLTQTSGQQNESKG-ISAIIRQRTCDDKVGVRKAALEALESIIRLS----------------LDSLQKADVLTLHDRCMDPALSVRKQAMISLTALLQEKPSCTMVQSLWLDGVFPLVMDRETTAQEKCFQILDEVLLSNIAPQSKSTSD 485
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: A0A210PG51_MIZYE (Condensin-2 complex subunit D3 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PG51_MIZYE) HSP 1 Score: 113 bits (283), Expect = 1.560e-21 Identity = 99/367 (26.98%), Postives = 163/367 (44.41%), Query Frame = 1
Query: 1360 VLTLLQHLCVSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWAADDSSRANGSGEGAAVSTPRAIGDGDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAAST---------------LSEVLSGIQGRRSGYK---------GGAFRQAVMEACGWGEAGM-----------------------------ERRHDGPLLETIRTRVEDEKANVRRNAVPALEAILKL-SPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQNRLVEIVRTVLIDRVVEWHKTEA 2298
V TLLQH+C P++ E R+R+ + + +L +L + V + +LS+ +KI R F++E++S LL P D S SGEG A R+++ L++AR +D+APTVR++A + L E+++ G R + +Q E G G D ++ +R R DEK NVR++A+ A+E I++ +P + + ELL ERC D +LS RK AM +L+SLL+ P+++TLQ+AW+ V+PL D E + Q++ +E + +LI +V K+ +
Sbjct: 351 VRTLLQHMCTKVPDKTEYRSRVTQSVIKILKDLPNEAFGKMVEWFYRLSKHSKISSRAFTIEIASMLLVT--PERDVDES----SGEGLADYVKH-----------------RSIMGLLLARCSDSAPTVRARAITAFAQCFVSADNNIKGALREIVTPFPGPRPAHAPHLIPTPMMDNRVQQLTAEDSIQGAGGKTPDCTASNTQAILNPKTPFGGVMLTPFNPNLPDDDGVMSMLRRRSRDEKVNVRKSALLAVENIIRFEAPDY-----------------RRQNLELLVERCRDPALSARKQAMQSLTSLLLEMPTEKTLQQAWLEGVMPLTIDRESSLQDKCMETLEDILIHNIVPAPKSRS 677
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: UPI00145909B1 (LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145909B1) HSP 1 Score: 109 bits (272), Expect = 3.100e-20 Identity = 92/361 (25.48%), Postives = 158/361 (43.77%), Query Frame = 1
Query: 1360 VLTLLQHLCVSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWAADDSSRANGSGEGAAVSTPRAIGDGDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAAST---------------LSEVLSGIQGRRSGYKGGAFRQAVME----ACGWGEAGMERR-------------------------------HDGPLLETIRTRVEDEKANVRRNAVPALEAILKL-SPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQNRLVEIVRTVLIDRVVEWHK 2289
V TL+QH+C P++ E R+R+ + + +L EL + V +L +LS+ AK +R F++++++ LL S P D + + +++ L++AR +D APTVR++A + L E+++ G R + M+ E E+ D ++ +R R DEK NVR+ A+ A+E I++ +P + + ELL ERC D +LS RK AM +L+SLL+ P ++TLQ+AW+ V+PL D E + Q++ +EI+ +L+ ++V HK
Sbjct: 350 VRTLIQHMCTKVPDKVEYRSRVTQSVIKILNELPNEAFAKVVEWLYRLSKHAKNANRAFTIDIAAMLL-----------------------SIPERDVDENFDEGLADNMKHLSLMGLLLARCSDIAPTVRARAITAFAQCFVSSDNNIRVALKEIVTPCLGSRPAHAPHLIPTPAMDNRAQQLTTDEEAAEKTLNRTATNTQSRLNPKTPFGGVLLTPFNPNLADDDGVMSMLRRRSRDEKVNVRKAALLAVENIIRFEAPDY-----------------RRQNLELLVERCRDPALSARKQAMQSLTSLLLEMPEEKTLQQAWLEGVMPLIIDRESSLQDKCMEILEDMLLHKIVPVHK 670
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Match: A0A8C5YT73_MARMA (Condensin-2 complex subunit D3 n=2 Tax=Marmotini TaxID=337730 RepID=A0A8C5YT73_MARMA) HSP 1 Score: 107 bits (268), Expect = 7.730e-20 Identity = 95/322 (29.50%), Postives = 141/322 (43.79%), Query Frame = 1
Query: 1357 PVLT-LLQHLCVSSPERAEGRARLAEGLAALLPELEEPDRVRFVVFLAKLSRSAKIVHRGFSVELSSRLLTEDWPWAADDSSRANGSGEGAAVSTPRAIGDGDGPSPCLTDGGGRTMLDLVVARAADTAPTVRSKAASTLSEVLS-GIQGRRSGYKGGAFRQAVMEACGWGEAGMERRHDGPLLET---------IRTRVEDEKANVRRNAVPALEAILKLSPAFSGGRASADGGEAAIGKEHEADFELLQERCNDMSLSTRKAAMGALSSLLMLRPSDETLQKAWVSSVLPLAGDPEQTCQNRLVEIVRTVLIDRVVEWHK 2289
PVL LLQH+C +++E R A+ L LL +L D FV +L K SRS+KI HR F++++ LL + P D + + E + + + +++ R D APTVRSKA S+ + L I ++ G H G LL +R R+ DEK NVR++AV L ILK S F E D LQ+ C D ++S RK A+ +L+ LLM +P +QKAW+ V+P+ D E T Q + +E + +L+ + K
Sbjct: 351 PVLRILLQHICAKVIDKSEYRTFAAQSLVQLLSKLPSADYATFVAWLYKYSRSSKIPHRVFTLDVVLALL--ELPEREIDGTVSL---EHQKFLKHKFL-----------------VQEIMFDRCLDKAPTVRSKALSSFAHCLELSISNASESVLELLINSPIVSQLG--------THTGTLLRNSSERCVMAMLRKRIRDEKTNVRKSAVQVLVNILKHSDIFG----------------MEEDLSTLQDLCRDPAVSVRKQALQSLTELLMAQPRCVLIQKAWLMGVIPVVMDCESTVQEKALECLDQLLLQNIKHHSK 626 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1398.2347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1398.2347.1 >prot_E-siliculosus-1a_F_contig1398.2347.1 ID=prot_E-siliculosus-1a_F_contig1398.2347.1|Name=mRNA_E-siliculosus-1a_F_contig1398.2347.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1202bp MGSLIDQTEGALARVLSLCSSGPVGEHDVDALQRHDEEALALLDINDDDAback to top mRNA from alignment at E-siliculosus-1a_F_contig1398:158..13042- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1398.2347.1 ID=mRNA_E-siliculosus-1a_F_contig1398.2347.1|Name=mRNA_E-siliculosus-1a_F_contig1398.2347.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=12885bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1398:158..13042- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1398:158..13042- >mRNA_E-siliculosus-1a_F_contig1398.2347.1 ID=mRNA_E-siliculosus-1a_F_contig1398.2347.1|Name=mRNA_E-siliculosus-1a_F_contig1398.2347.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=7212bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1398:158..13042- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |