mRNA_E-siliculosus-1a_F_contig13969.2343.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig13969.2343.1
Unique NamemRNA_E-siliculosus-1a_F_contig13969.2343.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: A0A524JW37_9FLAO (DNA polymerase III subunit alpha (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A524JW37_9FLAO)

HSP 1 Score: 553 bits (1426), Expect = 1.350e-195
Identity = 270/336 (80.36%), Postives = 298/336 (88.69%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTREL 1008
            C +KGY + LI EIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYM AVLNNGGGFYRS+FYIHEARMLGAT+HAPC N S   N IY KQLYLGF YL++LE RV +RI+KER+  G+F SLEDFLDRVLISIEQVSILIRIDAFRF  TNKHELLWK HLFL KN+K+DHPKLF P+ + F IP+L+TTD+EMAFTQLELLGF LCSPFELLVE PKN  G +DL+RYLN+HIDIYGY+VTVKNTSTHNGKRMHFATLVDQ G VFDTVLFPPVAA+Y FRG+GIYR YGKVVSEFG LSIEVVKM+K+DY+ DPRYADMKT+T+ L
Sbjct:   62 CLKKGYTEVLINEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMVAVLNNGGGFYRSEFYIHEARMLGATVHAPCINNSFLGNRIYGKQLYLGFGYLRDLEARVADRIIKERLLYGSFTSLEDFLDRVLISIEQVSILIRIDAFRFTQTNKHELLWKAHLFLGKNVKLDHPKLFPPRQRDFAIPRLHTTDMEMAFTQLELLGFSLCSPFELLVEPPKNTHGSRDLQRYLNRHIDIYGYLVTVKNTSTHNGKRMHFATLVDQHGEVFDTVLFPPVAAQYFFRGKGIYRFYGKVVSEFGFLSIEVVKMQKQDYIQDPRYADMKTSTKLL 397          
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: UPI001EE91AB8 (DNA polymerase III subunit alpha n=1 Tax=Pelagihabitans pacificus TaxID=2696054 RepID=UPI001EE91AB8)

HSP 1 Score: 571 bits (1472), Expect = 1.090e-194
Identity = 283/342 (82.75%), Postives = 302/342 (88.30%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTRELGFIRKN 1026
            CR+KGY DELIFEIW+QVASFAGYAFAKGHSASYAVESYQTLFLRAY+PLEYM AVLNNGGGFYRS+FYIHEARMLGATIH PC N S   N +Y KQLYLGF YLK+LE RV ERILKERI NG FLSLEDFLDRVLISIEQ+ ILIRIDAFRF  TNKHELLWK HLFL K+ KIDHPKLF PK Q F IP+L+TTDLEMAFTQLELLGFCLCSPFELL E P N  G KDL RYLN++IDIYGY+VTVKNTSTHNGK+MHFATLVDQQG VFDTVLFPPVAAKY FRGRG+YR YGKVVSEFG LSIEV+KMRKEDYV DPRYADMKT  REL F++K+
Sbjct:  639 CRKKGYGDELIFEIWDQVASFAGYAFAKGHSASYAVESYQTLFLRAYYPLEYMVAVLNNGGGFYRSEFYIHEARMLGATIHPPCINSSFGTNRLYGKQLYLGFGYLKDLEARVTERILKERILNGIFLSLEDFLDRVLISIEQLGILIRIDAFRFTHTNKHELLWKAHLFLGKSKKIDHPKLFAPKQQDFRIPRLHTTDLEMAFTQLELLGFCLCSPFELLQEPPMNANGSKDLARYLNRYIDIYGYLVTVKNTSTHNGKKMHFATLVDQQGEVFDTVLFPPVAAKYFFRGRGVYRFYGKVVSEFGFLSIEVIKMRKEDYVQDPRYADMKTANREL-FLKKD 979          
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: UPI000AE89227 (DNA polymerase III subunit alpha n=1 Tax=Maribacter antarcticus TaxID=505250 RepID=UPI000AE89227)

HSP 1 Score: 571 bits (1472), Expect = 1.580e-194
Identity = 281/341 (82.40%), Postives = 303/341 (88.86%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTRELGFIRK 1023
            CR+KGY DELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYM AVLNNGGGFY ++FYIHEARMLGA IHAPC N SVA N I DKQLYLGFMYLKELE RVI+R+LKER  NG + SLEDFLDRVLISIEQVSILIRID+FRF G NKHELLWK HLFL KN+KIDHPKLF+P+ QHFEIPKL+TT+LEMAFTQLELLGFCLCSP+ LLV  PKN TG KDLERYLNK+IDIYGY+VTVK+T TH GKRM FATLVDQQG VFDTVLFPPVAA Y F+GRGIYR YGKVVSEFG LSIEVVKM+K+DYV DPRYADMKT+ +  G  +K
Sbjct:  650 CREKGYDDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMVAVLNNGGGFYSAEFYIHEARMLGAIIHAPCVNNSVAGNHICDKQLYLGFMYLKELEVRVIDRMLKERSLNGRYASLEDFLDRVLISIEQVSILIRIDSFRFTGANKHELLWKAHLFLTKNVKIDHPKLFRPEQQHFEIPKLHTTNLEMAFTQLELLGFCLCSPYALLVTPPKNTTGSKDLERYLNKNIDIYGYIVTVKSTKTHKGKRMCFATLVDQQGAVFDTVLFPPVAAIYPFQGRGIYRFYGKVVSEFGFLSIEVVKMQKQDYVQDPRYADMKTSAKVFGPSKK 990          
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: A0A1G9T451_9FLAO (DNA-directed DNA polymerase n=2 Tax=Kriegella aquimaris TaxID=192904 RepID=A0A1G9T451_9FLAO)

HSP 1 Score: 560 bits (1443), Expect = 6.830e-190
Identity = 267/357 (74.79%), Postives = 311/357 (87.11%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTR----ELGFIRKNGSLSESKPSSL 1059
            CR+KG +D +IFE+W Q+ASFAGYAFAKGHSASYAVESYQ+LFLRAY+PLEYM AVLNNGGGFY S+FY+HEARMLGAT+HAPC NKS+A N IY KQLYLGFMYL++LE RV+ERILKER+ +G F SLEDFLDR++ISIEQ+SILIRIDAFRF G NKHELLW  H+FLNK++KIDHPKLF PKHQ F+IP L+TTDLEMAFTQ ELLGFCLCSPFELLV+ PKN +G KDL+RYLN+HIDIYGY+VTVKNT TH+GK+MHFATLVDQQG VFDTVLFPPVAA+Y+FRG+GIYR YGKVVSEF  LSIEV+KM K+DY+ DPRYADMKT+T+    +   ++      E+K S +
Sbjct:  660 CRKKGEEDRIIFEVWEQIASFAGYAFAKGHSASYAVESYQSLFLRAYYPLEYMVAVLNNGGGFYSSEFYVHEARMLGATVHAPCINKSLAVNRIYGKQLYLGFMYLRDLEGRVMERILKERLCHGAFASLEDFLDRIIISIEQLSILIRIDAFRFTGVNKHELLWNAHMFLNKSVKIDHPKLFPPKHQDFKIPTLHTTDLEMAFTQWELLGFCLCSPFELLVKPPKNKSGSKDLKRYLNRHIDIYGYLVTVKNTKTHSGKQMHFATLVDQQGEVFDTVLFPPVAAQYRFRGKGIYRFYGKVVSEFDFLSIEVIKMEKQDYIQDPRYADMKTSTKVFQEKKNAVKAQSQKGETKKSPI 1016          
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: A0A849FMN1_9FLAO (DNA-directed DNA polymerase n=1 Tax=Maribacter sp. TaxID=1897614 RepID=A0A849FMN1_9FLAO)

HSP 1 Score: 550 bits (1417), Expect = 3.640e-189
Identity = 265/334 (79.34%), Postives = 294/334 (88.02%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTR 1002
            CR+K Y ++LIFEIW+Q+ASFAGYAFAKGHSASYAVESYQ+LFLRAY+PLEYM AVLNNGGGFYR++ YIHEARMLGATIH PC NKS  ANCIY KQLYLG MYLKELE+RV+ERILKER  NG F SL +FLDRV+ISIEQ SILIRIDAFRF   N+HELLW+ HLFL+K + ++HPKLF P+HQ F IPK++TTDLEMAFTQLELLGFCLCSPFELL E PKN  G +DLERYL  HIDIYGY+VTVKNTSTHNGKRMHFATL+DQQG VFDTVLFPPVAA+Y FRGRG+YR YGKVVSEFG LSIEV+KM K+DYV DPRYADMKT  R
Sbjct:  419 CREKEYDEKLIFEIWDQIASFAGYAFAKGHSASYAVESYQSLFLRAYYPLEYMVAVLNNGGGFYRAETYIHEARMLGATIHGPCVNKSQPANCIYGKQLYLGLMYLKELESRVMERILKERTTNGVFTSLANFLDRVVISIEQASILIRIDAFRFTQINQHELLWQAHLFLSKGMLVEHPKLFPPRHQKFSIPKMHTTDLEMAFTQLELLGFCLCSPFELLKEPPKNEHGSRDLERYLGNHIDIYGYLVTVKNTSTHNGKRMHFATLLDQQGEVFDTVLFPPVAAQYYFRGRGVYRFYGKVVSEFGFLSIEVIKMLKQDYVQDPRYADMKTANR 752          
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: A0A1M5M0I0_9FLAO (DNA-directed DNA polymerase n=3 Tax=Muricauda TaxID=111500 RepID=A0A1M5M0I0_9FLAO)

HSP 1 Score: 551 bits (1421), Expect = 9.070e-187
Identity = 263/336 (78.27%), Postives = 299/336 (88.99%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTREL 1008
            CR+KGY D LIFEIWNQVASFAGYAFAKGHSASYAVESYQ+LFLRAY+PLEYM AVLNNGGGFYRS+FYIH+ARM+GATIHAPC N S  AN I    +YLG +YL++LE RV+ERI+KER  NGTF+SLEDFLDRVLIS+EQ+SILIRIDAFRF G NKH+LLWK HL L+KN +++HPKLF P+HQ F+IPKL TT+LE AF QLELLGFCLCSPFELLV  PKN  G++DLERYLNKHIDIYGY+VTVKNT+TH+GKRMHFAT+VDQ G VFDTVLFPPVAAKY FRG+GIYR YGKVVSEFG LSIEV+KM+K+DY+PDPRYADMKT+ + L
Sbjct:  660 CRKKGYADSLIFEIWNQVASFAGYAFAKGHSASYAVESYQSLFLRAYYPLEYMVAVLNNGGGFYRSEFYIHDARMMGATIHAPCINNSAVANRIQGAHIYLGMLYLRDLENRVMERIIKERTLNGTFVSLEDFLDRVLISVEQLSILIRIDAFRFTGINKHKLLWKAHLMLSKNDRLEHPKLFPPRHQKFKIPKLYTTNLETAFDQLELLGFCLCSPFELLVAPPKNTNGQRDLERYLNKHIDIYGYLVTVKNTNTHSGKRMHFATMVDQHGEVFDTVLFPPVAAKYFFRGKGIYRFYGKVVSEFGFLSIEVIKMQKQDYIPDPRYADMKTSKKLL 995          
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: A0A2T0MIY7_9FLAO (DNA-directed DNA polymerase n=2 Tax=Muricauda pacifica TaxID=1080225 RepID=A0A2T0MIY7_9FLAO)

HSP 1 Score: 550 bits (1418), Expect = 2.780e-186
Identity = 266/347 (76.66%), Postives = 298/347 (85.88%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTRELGFIRKNGSLSE 1041
            CR+K Y D LIFEIWNQVASFAGYAFAKGHSASYAVESYQ+LFLRAYFPLEYM AVLNNGGGFYRS+FYIH+ARMLGATIH PC N S+A N I  K +YLG MYL++LE RV+ERI+ ER  NG F SLEDFLDRV IS+EQ+SILIRIDAFRF G NKHELLWKTHL L+KN +++HPKLF PKHQ F+IP+LNTT LE AF QLELLGFCLCSPF+LL E PKN+ G++DL+ YLNK+IDIYGY+VTVKNTSTH GKRMHFATLVDQ G VFDTVLFPPVAAKY FRG+GIYR YGKVV EFG LSIEV+KM+KEDY+PDPRYADMKT+ + L   + N  L E
Sbjct:  660 CRKKEYPDTLIFEIWNQVASFAGYAFAKGHSASYAVESYQSLFLRAYFPLEYMVAVLNNGGGFYRSEFYIHDARMLGATIHPPCINNSMAVNRIEGKHIYLGMMYLRDLEKRVMERIILERFHNGNFSSLEDFLDRVFISVEQLSILIRIDAFRFTGVNKHELLWKTHLMLSKNDRLEHPKLFPPKHQKFQIPQLNTTSLETAFEQLELLGFCLCSPFDLLAEPPKNSNGQRDLQHYLNKNIDIYGYLVTVKNTSTHTGKRMHFATLVDQHGEVFDTVLFPPVAAKYYFRGKGIYRFYGKVVEEFGFLSIEVIKMKKEDYIPDPRYADMKTSKKLLN-TKSNSELKE 1005          
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: A0A6I2MQW5_9FLAO (DNA-directed DNA polymerase n=6 Tax=Maribacter TaxID=252356 RepID=A0A6I2MQW5_9FLAO)

HSP 1 Score: 550 bits (1416), Expect = 4.700e-186
Identity = 264/334 (79.04%), Postives = 293/334 (87.72%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTR 1002
            CR+KGY D+LIFEIW Q+ASFAGYAFAKGHSASYAVESYQ+LFLR Y+PLEYM AVLNNGGGFYR++ YIHEARMLGATIHAPC NKS  ANC+Y  QLYLG MYLKELE+RV++RILKER  NG F SL DFLDRV+ISIEQVSILIRIDAFRF   N+HELLW+ HLFL+K + ++HPKLF P+HQ F IPK++TTDLEMAFTQLELLGFCLCSPFELL E  KN+ G KDLERYL  HIDIYGY+VTVKNTSTHNGKRMHFATL+DQ G VFDTVLFPPVAAKY FRGRG+YR YGKVVSEFG LSIEV+KM K+DY+ DPRYADMKT  +
Sbjct:  660 CREKGYDDKLIFEIWGQIASFAGYAFAKGHSASYAVESYQSLFLRTYYPLEYMVAVLNNGGGFYRAESYIHEARMLGATIHAPCVNKSQPANCLYGTQLYLGLMYLKELESRVMDRILKERTANGPFTSLADFLDRVVISIEQVSILIRIDAFRFTQVNQHELLWQAHLFLSKGMLVEHPKLFPPRHQKFSIPKMHTTDLEMAFTQLELLGFCLCSPFELLKEPLKNDHGSKDLERYLGNHIDIYGYLVTVKNTSTHNGKRMHFATLLDQHGEVFDTVLFPPVAAKYHFRGRGVYRFYGKVVSEFGFLSIEVIKMLKQDYIQDPRYADMKTANK 993          
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: A0A4Q8QC07_9FLAO (DNA-directed DNA polymerase n=5 Tax=Muricauda TaxID=111500 RepID=A0A4Q8QC07_9FLAO)

HSP 1 Score: 550 bits (1416), Expect = 6.190e-186
Identity = 262/336 (77.98%), Postives = 299/336 (88.99%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTREL 1008
            CR+KGY D LIFEIWNQVASFAGYAFAKGHSASYAVESYQ+LFLRAYFPLEYM AVLNNGGGFYRS+FYIH+ARM+GATIH PC N SV  NCI  K ++LG MYL++LE RV+ERI+ ER++NG F+SLEDFLDRVLIS+EQ+SILIRIDAFRF G NKHELLWKTHL L+KN +++HPKLF P+++ F+IP+L+TT LE AF +LELLGFCL SPFELL E PKN+ G++DL+RYLNKHIDIYGY+VTVKNTSTH GKRMHFATLVDQ G VFDTVLFPPVAAKY FRG+GIYR YGKVV EFG LSIEV+KM+KEDY+PDPRYADMKT+ R L
Sbjct:  660 CRKKGYADVLIFEIWNQVASFAGYAFAKGHSASYAVESYQSLFLRAYFPLEYMVAVLNNGGGFYRSEFYIHDARMMGATIHPPCINNSVIVNCIRGKHIFLGMMYLRDLENRVMERIVTERLKNGDFISLEDFLDRVLISVEQLSILIRIDAFRFTGINKHELLWKTHLMLSKNDRLEHPKLFPPRYRKFQIPELHTTALETAFEELELLGFCLYSPFELLAEAPKNSNGQRDLQRYLNKHIDIYGYLVTVKNTSTHTGKRMHFATLVDQHGEVFDTVLFPPVAAKYYFRGKGIYRFYGKVVEEFGFLSIEVIKMQKEDYIPDPRYADMKTSKRLL 995          
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Match: A0A1G7IGW5_9FLAO (DNA-directed DNA polymerase n=1 Tax=Pricia antarctica TaxID=641691 RepID=A0A1G7IGW5_9FLAO)

HSP 1 Score: 549 bits (1415), Expect = 6.460e-186
Identity = 269/334 (80.54%), Postives = 289/334 (86.53%), Query Frame = 1
Query:    1 CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPLEYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLYLGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRIDAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDLEMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVTVKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGKVVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTR 1002
            CR+KGY D LIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAY+PLEYM AVLNNGGGFYR +FY+HEARMLGA IH PC N S   N I    LYLGF YL+ELE RV ERILKERI NG F SLEDFLDRV +SIEQVSILIRIDAFRF GTNKHELLWK HLFL K  KIDHPKLF+P HQ FEIP L+TTDLEMAFTQLELLGF LCSPFELL++ PKN TG KDLERYL +HIDIYGY++TVKNT TH G  M FATL+DQQG VFDTVLFPP+AAKY+FRG+GIYR YGKVVSEFG LSIEV+KMRKEDYV DPRYADMKT+T+
Sbjct:  650 CRKKGYDDTLIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYYPLEYMVAVLNNGGGFYRPEFYVHEARMLGAKIHPPCVNTSNNGNRILGNNLYLGFGYLRELEDRVSERILKERIINGIFNSLEDFLDRVTLSIEQVSILIRIDAFRFTGTNKHELLWKAHLFLGKTQKIDHPKLFRPDHQDFEIPSLHTTDLEMAFTQLELLGFALCSPFELLIDPPKNTTGSKDLERYLERHIDIYGYLITVKNTKTHKGSPMQFATLLDQQGQVFDTVLFPPIAAKYRFRGKGIYRFYGKVVSEFGFLSIEVIKMRKEDYVQDPRYADMKTSTK 983          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13969.2343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A524JW37_9FLAO1.350e-19580.36DNA polymerase III subunit alpha (Fragment) n=1 Ta... [more]
UPI001EE91AB81.090e-19482.75DNA polymerase III subunit alpha n=1 Tax=Pelagihab... [more]
UPI000AE892271.580e-19482.40DNA polymerase III subunit alpha n=1 Tax=Maribacte... [more]
A0A1G9T451_9FLAO6.830e-19074.79DNA-directed DNA polymerase n=2 Tax=Kriegella aqui... [more]
A0A849FMN1_9FLAO3.640e-18979.34DNA-directed DNA polymerase n=1 Tax=Maribacter sp.... [more]
A0A1M5M0I0_9FLAO9.070e-18778.27DNA-directed DNA polymerase n=3 Tax=Muricauda TaxI... [more]
A0A2T0MIY7_9FLAO2.780e-18676.66DNA-directed DNA polymerase n=2 Tax=Muricauda paci... [more]
A0A6I2MQW5_9FLAO4.700e-18679.04DNA-directed DNA polymerase n=6 Tax=Maribacter Tax... [more]
A0A4Q8QC07_9FLAO6.190e-18677.98DNA-directed DNA polymerase n=5 Tax=Muricauda TaxI... [more]
A0A1G7IGW5_9FLAO6.460e-18680.54DNA-directed DNA polymerase n=1 Tax=Pricia antarct... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13969contigE-siliculosus-1a_F_contig13969:3..1064 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size1062
Model size1062
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Best eggNOG OGNA|NA|NA
Best tax levelMaribacter
COG Functional cat.L
EC2.7.7.7
EggNOG OGs1HX66@117743,2PGHR@252356,4NE2R@976,COG0587@1,COG0587@2
EggNOG free text desc.Bacterial DNA polymerase III alpha subunit
KEGG ModuleM00260
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440
KEGG ReactionR00375,R00376,R00377,R00378
KEGG koko:K02337,ko:K14162
KEGG rclassRC02795
Preferred namednaE-2
Seed eggNOG ortholog313603.FB2170_04075
Seed ortholog evalue7.8e-154
Seed ortholog score550.1
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927908.8938715-CDS-E-siliculosus-1a_F_contig13969:2..10641622927908.8938715-CDS-E-siliculosus-1a_F_contig13969:2..1064Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13969 3..1064 +
1696318732.8380613-CDS-E-siliculosus-1a_F_contig13969:2..10641696318732.8380613-CDS-E-siliculosus-1a_F_contig13969:2..1064Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13969 3..1064 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13969.2343.1prot_E-siliculosus-1a_F_contig13969.2343.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig13969 3..1064 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig13969.2343.1

>prot_E-siliculosus-1a_F_contig13969.2343.1 ID=prot_E-siliculosus-1a_F_contig13969.2343.1|Name=mRNA_E-siliculosus-1a_F_contig13969.2343.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=354bp
CRQKGYKDELIFEIWNQVASFAGYAFAKGHSASYAVESYQTLFLRAYFPL
EYMGAVLNNGGGFYRSQFYIHEARMLGATIHAPCTNKSVAANCIYDKQLY
LGFMYLKELETRVIERILKERIQNGTFLSLEDFLDRVLISIEQVSILIRI
DAFRFPGTNKHELLWKTHLFLNKNIKIDHPKLFKPKHQHFEIPKLNTTDL
EMAFTQLELLGFCLCSPFELLVEQPKNNTGRKDLERYLNKHIDIYGYMVT
VKNTSTHNGKRMHFATLVDQQGLVFDTVLFPPVAAKYQFRGRGIYRCYGK
VVSEFGVLSIEVVKMRKEDYVPDPRYADMKTTTRELGFIRKNGSLSESKP
SSL*
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mRNA from alignment at E-siliculosus-1a_F_contig13969:3..1064+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig13969.2343.1 ID=mRNA_E-siliculosus-1a_F_contig13969.2343.1|Name=mRNA_E-siliculosus-1a_F_contig13969.2343.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1062bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13969:3..1064+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGCCGTCAAAAAGGTTATAAAGATGAGTTGATTTTCGAAATATGGAATCA AGTTGCCAGTTTTGCAGGTTATGCTTTTGCCAAAGGTCATTCCGCTTCTT ATGCCGTAGAGAGTTATCAAACCTTATTTTTACGTGCTTATTTTCCGCTA GAATATATGGGAGCTGTCTTAAATAATGGTGGCGGTTTTTATCGGTCTCA ATTTTATATTCATGAAGCTCGTATGTTAGGTGCTACAATACATGCGCCAT GCACCAATAAGAGTGTTGCAGCAAATTGCATTTATGATAAGCAGTTGTAT TTGGGTTTTATGTATTTGAAAGAGTTGGAAACTCGTGTTATCGAACGCAT TCTTAAAGAGCGTATTCAAAATGGTACGTTTCTTTCTTTGGAAGATTTTC TAGATCGTGTTTTAATCTCCATAGAACAAGTGAGTATTCTGATTCGTATT GATGCATTTCGATTTCCAGGAACGAATAAGCATGAACTTTTATGGAAGAC ACATCTATTTTTAAACAAGAATATTAAAATCGATCATCCCAAGTTATTCA AGCCTAAACATCAACATTTTGAAATTCCTAAATTGAATACGACTGATTTA GAAATGGCTTTTACACAATTAGAACTGTTAGGTTTTTGTTTGTGTAGTCC GTTTGAATTACTCGTAGAGCAGCCAAAGAATAACACAGGTCGTAAAGATC TCGAGCGTTATTTAAATAAACATATTGATATTTATGGTTATATGGTTACT GTCAAAAACACAAGCACTCATAATGGAAAACGGATGCATTTCGCAACTTT AGTTGATCAGCAGGGCTTGGTTTTTGATACCGTACTTTTCCCCCCTGTGG CTGCCAAATACCAATTTCGAGGGCGAGGAATTTATCGTTGTTATGGTAAA GTGGTGAGCGAGTTTGGGGTTTTAAGTATCGAAGTCGTTAAAATGAGAAA AGAAGACTATGTGCCAGATCCGAGATATGCTGATATGAAAACAACAACTA GAGAACTTGGATTTATTAGAAAGAATGGGTCTTTGTCGGAGAGCAAACCT TCTTCTCTATAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13969:3..1064+

>mRNA_E-siliculosus-1a_F_contig13969.2343.1 ID=mRNA_E-siliculosus-1a_F_contig13969.2343.1|Name=mRNA_E-siliculosus-1a_F_contig13969.2343.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2124bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13969:3..1064+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGCCGTCAAAAAGGTTATAAAGATGAGTTGATTTTCGAAATATGGAATCA
AGTTGCCAGTTTTGCAGGTTATGCTTTTGCCAAAGGTCATTCCGCTTCTT
ATGCCGTAGAGAGTTATCAAACCTTATTTTTACGTGCTTATTTTCCGCTA
GAATATATGGGAGCTGTCTTAAATAATGGTGGCGGTTTTTATCGGTCTCA
ATTTTATATTCATGAAGCTCGTATGTTAGGTGCTACAATACATGCGCCAT
GCACCAATAAGAGTGTTGCAGCAAATTGCATTTATGATAAGCAGTTGTAT
TTGGGTTTTATGTATTTGAAAGAGTTGGAAACTCGTGTTATCGAACGCAT
TCTTAAAGAGCGTATTCAAAATGGTACGTTTCTTTCTTTGGAAGATTTTC
TAGATCGTGTTTTAATCTCCATAGAACAAGTGAGTATTCTGATTCGTATT
GATGCATTTCGATTTCCAGGAACGAATAAGCATGAACTTTTATGGAAGAC
ACATCTATTTTTAAACAAGAATATTAAAATCGATCATCCCAAGTTATTCA
AGCCTAAACATCAACATTTTGAAATTCCTAAATTGAATACGACTGATTTA
GAAATGGCTTTTACACAATTAGAACTGTTAGGTTTTTGTTTGTGTAGTCC
GTTTGAATTACTCGTAGAGCAGCCAAAGAATAACACAGGTCGTAAAGATC
TCGAGCGTTATTTAAATAAACATATTGATATTTATGGTTATATGGTTACT
GTCAAAAACACAAGCACTCATAATGGAAAACGGATGCATTTCGCAACTTT
AGTTGATCAGCAGGGCTTGGTTTTTGATACCGTACTTTTCCCCCCTGTGG
CTGCCAAATACCAATTTCGAGGGCGAGGAATTTATCGTTGTTATGGTAAA
GTGGTGAGCGAGTTTGGGGTTTTAAGTATCGAAGTCGTTAAAATGAGAAA
AGAAGACTATGTGCCAGATCCGAGATATGCTGATATGAAAACAACAACTA
GAGAACTTGGATTTATTAGAAAGAATGGGTCTTTGTCGGAGAGCAAACCT
TCTTCTCTATAATGCCGTCAAAAAGGTTATAAAGATGAGTTGATTTTCGA
AATATGGAATCAAGTTGCCAGTTTTGCAGGTTATGCTTTTGCCAAAGGTC
ATTCCGCTTCTTATGCCGTAGAGAGTTATCAAACCTTATTTTTACGTGCT
TATTTTCCGCTAGAATATATGGGAGCTGTCTTAAATAATGGTGGCGGTTT
TTATCGGTCTCAATTTTATATTCATGAAGCTCGTATGTTAGGTGCTACAA
TACATGCGCCATGCACCAATAAGAGTGTTGCAGCAAATTGCATTTATGAT
AAGCAGTTGTATTTGGGTTTTATGTATTTGAAAGAGTTGGAAACTCGTGT
TATCGAACGCATTCTTAAAGAGCGTATTCAAAATGGTACGTTTCTTTCTT
TGGAAGATTTTCTAGATCGTGTTTTAATCTCCATAGAACAAGTGAGTATT
CTGATTCGTATTGATGCATTTCGATTTCCAGGAACGAATAAGCATGAACT
TTTATGGAAGACACATCTATTTTTAAACAAGAATATTAAAATCGATCATC
CCAAGTTATTCAAGCCTAAACATCAACATTTTGAAATTCCTAAATTGAAT
ACGACTGATTTAGAAATGGCTTTTACACAATTAGAACTGTTAGGTTTTTG
TTTGTGTAGTCCGTTTGAATTACTCGTAGAGCAGCCAAAGAATAACACAG
GTCGTAAAGATCTCGAGCGTTATTTAAATAAACATATTGATATTTATGGT
TATATGGTTACTGTCAAAAACACAAGCACTCATAATGGAAAACGGATGCA
TTTCGCAACTTTAGTTGATCAGCAGGGCTTGGTTTTTGATACCGTACTTT
TCCCCCCTGTGGCTGCCAAATACCAATTTCGAGGGCGAGGAATTTATCGT
TGTTATGGTAAAGTGGTGAGCGAGTTTGGGGTTTTAAGTATCGAAGTCGT
TAAAATGAGAAAAGAAGACTATGTGCCAGATCCGAGATATGCTGATATGA
AAACAACAACTAGAGAACTTGGATTTATTAGAAAGAATGGGTCTTTGTCG
GAGAGCAAACCTTCTTCTCTATAA
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