mRNA_E-siliculosus-1a_F_contig1392.2321.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1392.2321.1
Unique NamemRNA_E-siliculosus-1a_F_contig1392.2321.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: A0A6H5K9K8_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K8_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 2.260e-140
Identity = 238/316 (75.32%), Postives = 251/316 (79.43%), Query Frame = 1 
Query:  457 MGVATVVNVHLGNEGDTEKQVTGLLSLLEDLRSGDXXXXXXXXXXXXXXDQQHIPKTSNQRRRKLRRKEEGEHLAVRGLDEDRRLLIVVGDFNFESTSSGYRRMVSEGGLRSAANVSTEAAAAEATGWFPPATASDFPAMGPNYPANVYHAAPKLADDGVVPEKREVLRSFLGDGAAAVNAGDGVAGGVVNDGHGDDALGVVSGGGSVVDDVISDDRNAVGGVS-VRVGGDGYGGDASAXXXXXXVGEGGNESGDTVVAGDADNSGALDFVFFSAGGGGISCRSYEVHREFSQERYADGYPSVAEFEVSCPSLAPE 1401
            MGVATVVNVHLGNEGDTEKQVTGLLSLLEDLR+G+              DQ H+PKTSNQRRRKLRRK+ GE LAVRGLDEDRRLLIVVGDFNFESTSSGYRRMVSEGGL+SAANVS EAA AEATGWFPPATAS+FPA+ PNYP  VYH APKLADDGVVP+KREVLRS +GDGAAAVNA +GVAGGV NDGH +DALGV SG G VVDD   DD + VGGVS +RV                          DT VAGDADN GALDFVFFSAGGGGISCRSYEVHREFSQERYADGYPSVAEFEVSCP LAPE
Sbjct:    1 MGVATVVNVHLGNEGDTEKQVTGLLSLLEDLRAGNLRTRDLRERDGIRRDQ-HMPKTSNQRRRKLRRKK-GEDLAVRGLDEDRRLLIVVGDFNFESTSSGYRRMVSEGGLQSAANVSAEAAEAEATGWFPPATASNFPAIIPNYPVKVYHPAPKLADDGVVPDKREVLRSLVGDGAAAVNASEGVAGGVENDGHRNDALGVGSGSGGVVDDF--DDGDVVGGVSAMRV--------------------------DTFVAGDADNRGALDFVFFSAGGGGISCRSYEVHREFSQERYADGYPSVAEFEVSCPPLAPE 286
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: D7FZJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ1_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 3.760e-83
Identity = 131/136 (96.32%), Postives = 132/136 (97.06%), Query Frame = 1 
Query:  112 KAVRVVNFNVYMGYDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLGNEGDTEKQV 519
            + VRVVNFNVYMGYDRRGEDN FRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENAC VHATLSLG GMGVATVVNVHLGNEGDTEKQV
Sbjct:   13 RTVRVVNFNVYMGYDRRGEDNTFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACVVHATLSLGGGMGVATVVNVHLGNEGDTEKQV 148
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: A0A1F9Z177_9EURY (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Euryarchaeota archaeon RBG_16_67_27 TaxID=1797980 RepID=A0A1F9Z177_9EURY)

HSP 1 Score: 75.5 bits (184), Expect = 8.240e-11
Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = 1 
Query:  118 VRVVNFNVYMGYDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLG-NEGDTEKQVTGLLSLLE 543
            +RV+ FNV+ G+   G  +  R+  +++    D+  LQE+  +RLT G     G ++ + G  +A   P  E T+G A+LSRLP+++W +  L    G+    VHATL      G   V+ VHLG  + D + QV+ +L+ L+
Sbjct:  415 LRVMTFNVHQGFGADGLLDVSRIADVVRLASPDVLALQESDTVRLTNGGVDLVGYLSASLGYHVAYGPPTREQTYGVAVLSRLPIVTWSYALLTSA-GDQRALVHATLQ--SAFGSIHVIAVHLGLRQADRDVQVSEVLAYLD 554
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: T0Q9N3_SAPDV (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q9N3_SAPDV)

HSP 1 Score: 74.7 bits (182), Expect = 1.490e-10
Identity = 56/154 (36.36%), Postives = 85/154 (55.19%), Query Frame = 1 
Query:   94 LADATSKAVRVVNFNVYMGYDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLGNEGDTEKQVTGLLSLLEDLRS 555
            L + TS  +R+V+FNVY G++R G +N   +  +L D    I  LQE+  M+   G+   A  +A   GM   A+     D++GC +LS  P+L+     LP   GENAC  H  L++  G  +  V+NVHLGN+G T++  T L  +L  +R+
Sbjct:  449 LGNVTSD-LRLVSFNVYQGFNRAGGNNFNAIRSMLDDFNPHIVALQESDTMQTGSGSLDLALYLALHRGMYSFASPATDADSFGCTLLSSFPILAATGIVLPS-QGENACFQHVQLNV-RGTPLH-VMNVHLGNDGTTDRD-TQLALVLAHVRN 597
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: A0A1F9Z911_9EURY (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Euryarchaeota archaeon RBG_16_68_13 TaxID=1797982 RepID=A0A1F9Z911_9EURY)

HSP 1 Score: 73.2 bits (178), Expect = 4.470e-10
Identity = 52/151 (34.44%), Postives = 77/151 (50.99%), Query Frame = 1 
Query:  100 DATSKAVRVVNFNVYMGYDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLG-NEGDTEKQVTGLLSLLEDL 549
            D  +  +RV+ FNV+ G+D  G  +   +  +++    D+  LQE+  +R+T G     G +A   G   A   P  E T+G AILSRLP+ SW +R L    G+    VHA L+   G     VV VHLG +  + E QV  +L+  + L
Sbjct:  409 DPGTDLLRVMTFNVHQGFDASGRLDVGGITDVVRLANPDLLALQESDTVRVTSGGVDLVGYIAGTLGYHAAYGPPTREQTYGVAILSRLPIESWSYRLLAS-EGDQRALVHARLATVRGP--LDVVAVHLGLDPRERETQVRQVLAFADSL 556
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: A0A067CUP7_SAPPC (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CUP7_SAPPC)

HSP 1 Score: 72.0 bits (175), Expect = 8.530e-10
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 1 
Query:  118 VRVVNFNVYMGYDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLGNEGDTEK 513
            +R+V+FN Y G++R G +N   +  +L D +  I  LQE+  M+   G+      +A   GM   A      D++GC +LS  P+L+     LP   GENAC  H  L++   +    V+NVHLGN+G T++
Sbjct:  320 LRLVSFNAYQGFNRAGGNNFHAIRSMLDDFDPHIVALQESDTMQTGSGSLDLTLYLALHRGMYSFANPATDADSFGCTLLSSFPILAASGIVLPS-LGENACFQHVLLNVHGTL--LHVMNVHLGNDGTTDR 448
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: A0A6A5AZX2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AZX2_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.330e-9
Identity = 54/141 (38.30%), Postives = 72/141 (51.06%), Query Frame = 1 
Query:  121 RVVNFNVYMGYDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPV---LSWGWRRLPRGPGENAC------EVHATLSLGEGMGVATVVNVHLGNEGDTEKQ 516
            RV +FNVY G++R G  N   +   ++D +  +  LQE+  M+   G       +A+  GM   A     ED++GC  LS  P+   LS G   LP   GENAC      +VH T        V TVVNVHLGN+G +EKQ
Sbjct:  199 RVFSFNVYQGFNRAGLTNFQPILTAIQDYQPHMVALQESDTMQAGSGAIDMTDFLAQELGMYSYAHPRTDEDSFGCTFLSVFPIVEALSTGVI-LPSPRGENACMQMVAVDVHGT--------VVTVVNVHLGNDGMSEKQ 330
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: A0A397JMH8_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JMH8_9GLOM)

HSP 1 Score: 71.6 bits (174), Expect = 1.760e-9
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 1 
Query:  133 FNVYMGYDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLGEGMGVATVVNVHLGNEGDTEKQVTGLLSLLEDLRS 555
            + ++   D     + +R+  L+KDLE D+ GL E+ L R+ +GNR     +A    M        ++ TWGCA+LS+ P+++     LP   GE AC +HATL +  G  V  +V+ H G E D E +      L + +RS
Sbjct:  846 WTIHFALDNDMWASEYRMRDLIKDLEIDVIGLLESDLGRIIMGNRDLTQFLAEDLNMYSDYGPGPSKHTWGCAMLSKFPIINSTHHLLPSPVGELACAIHATLDV-YGKEVDVIVS-HNGQEEDVEDRKLQTTELAKIMRS 984
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: A0A162IJ80_9EURO (Calcofluor white hypersensitive protein n=1 Tax=Ascosphaera apis ARSEF 7405 TaxID=392613 RepID=A0A162IJ80_9EURO)

HSP 1 Score: 70.5 bits (171), Expect = 3.870e-9
Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 1 
Query:  133 FNVYMGYDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSL-GEGMGVATVVNVHLGNEGDTE--KQVTGLLSLL 540
            + V+   D     +  R+   L+DLE D+ GL E+ L R+ +GNR     +A   GM + A     + TWGCA+LS+ P+++     LP   GE A  +HATL + GE   +  VV  H G E D E  +Q T  LS L
Sbjct:  698 WTVHFSLDNDMWSSEVRMRDALRDLELDVVGLLESDLQRIIMGNRDTTQFLAEDLGMYVDAGPGPNKHTWGCALLSKFPIVNSTHHLLPSPVGELAPAIHATLDVYGE---MIDVVVFHSGQEEDVEDRRQQTEYLSHL 833
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BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Match: W4H7F4_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7F4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.940e-9
Identity = 53/141 (37.59%), Postives = 71/141 (50.35%), Query Frame = 1 
Query:  121 RVVNFNVYMGYDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAGMVLAAAAPVAEDTWGCAILSRLPVL---SWGWRRLPRGPGENAC------EVHATLSLGEGMGVATVVNVHLGNEGDTEKQ 516
            RV +FNVY G++R G  N   +   ++D E  +  LQE+  M+   G       +A+  GM   A     ED++GC  LS  P++   S G   LP   GENAC      +VH T          TVVNVHLGN+G +EKQ
Sbjct:  488 RVFSFNVYQGFNRAGLTNFQPILTAIQDYEPHMVALQESDTMQAGSGAIDMTDFLAQELGMYSYAHPRTVEDSFGCTFLSVFPIVEAQSTGVI-LPSPRGENACMQMVAVDVHGTA--------VTVVNVHLGNDGMSEKQ 619
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1392.2321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9K8_9PHAE2.260e-14075.32Endo/exonuclease/phosphatase domain-containing pro... [more]
D7FZJ1_ECTSI3.760e-8396.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1F9Z177_9EURY8.240e-1133.57Endo/exonuclease/phosphatase domain-containing pro... [more]
T0Q9N3_SAPDV1.490e-1036.36Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A1F9Z911_9EURY4.470e-1034.44Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A067CUP7_SAPPC8.530e-1034.85Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6A5AZX2_9STRA1.330e-938.30Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A397JMH8_9GLOM1.760e-933.33Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A162IJ80_9EURO3.870e-936.69Calcofluor white hypersensitive protein n=1 Tax=As... [more]
W4H7F4_9STRA5.940e-937.59Uncharacterized protein n=12 Tax=Aphanomyces astac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1392contigE-siliculosus-1a_F_contig1392:21525..27669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size1404
Model size1405
Exons5
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelTremellales
COG Functional cat.T
EggNOG OGs38F49@33154,3NVQ6@4751,3UXX6@5204,3VEU9@5234,KOG3979@1,KOG3979@2759
EggNOG free text desc.Frag1/DRAM/Sfk1 family
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0005933,GO:0005934,GO:0005935,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0019538,GO:0019637,GO:0030427,GO:0031224,GO:0031226,GO:0031505,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045017,GO:0045229,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
Preferred nameCWH43
Seed eggNOG ortholog5217.XP_007005180.1
Seed ortholog evalue1.1e-11
Seed ortholog score78.2
Taxonomic scopeFungi
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1392.2321.1prot_E-siliculosus-1a_F_contig1392.2321.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1392 21525..27669 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927904.9679265-CDS-E-siliculosus-1a_F_contig1392:21524..224121622927904.9679265-CDS-E-siliculosus-1a_F_contig1392:21524..22412Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 21525..22412 -
1696318731.5121133-CDS-E-siliculosus-1a_F_contig1392:21524..224121696318731.5121133-CDS-E-siliculosus-1a_F_contig1392:21524..22412Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 21525..22412 -
1622927904.9830139-CDS-E-siliculosus-1a_F_contig1392:24060..241991622927904.9830139-CDS-E-siliculosus-1a_F_contig1392:24060..24199Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 24061..24199 -
1696318731.5217662-CDS-E-siliculosus-1a_F_contig1392:24060..241991696318731.5217662-CDS-E-siliculosus-1a_F_contig1392:24060..24199Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 24061..24199 -
1622927904.9981735-CDS-E-siliculosus-1a_F_contig1392:25370..255161622927904.9981735-CDS-E-siliculosus-1a_F_contig1392:25370..25516Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 25371..25516 -
1696318731.5299146-CDS-E-siliculosus-1a_F_contig1392:25370..255161696318731.5299146-CDS-E-siliculosus-1a_F_contig1392:25370..25516Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 25371..25516 -
1622927905.0109174-CDS-E-siliculosus-1a_F_contig1392:27005..271221622927905.0109174-CDS-E-siliculosus-1a_F_contig1392:27005..27122Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 27006..27122 -
1696318731.5385354-CDS-E-siliculosus-1a_F_contig1392:27005..271221696318731.5385354-CDS-E-siliculosus-1a_F_contig1392:27005..27122Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 27006..27122 -
1622927905.0252466-CDS-E-siliculosus-1a_F_contig1392:27555..276691622927905.0252466-CDS-E-siliculosus-1a_F_contig1392:27555..27669Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 27556..27669 -
1696318731.5474036-CDS-E-siliculosus-1a_F_contig1392:27555..276691696318731.5474036-CDS-E-siliculosus-1a_F_contig1392:27555..27669Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1392 27556..27669 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1392.2321.1

>prot_E-siliculosus-1a_F_contig1392.2321.1 ID=prot_E-siliculosus-1a_F_contig1392.2321.1|Name=mRNA_E-siliculosus-1a_F_contig1392.2321.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=468bp
SSQGPVSSSAGTVDLDGLAGGRRDLRAAGSELADATSKAVRVVNFNVYMG
YDRRGEDNAFRVGRLLKDLEADIAGLQETGLMRLTLGNRHYAGAVARAAG
MVLAAAAPVAEDTWGCAILSRLPVLSWGWRRLPRGPGENACEVHATLSLG
EGMGVATVVNVHLGNEGDTEKQVTGLLSLLEDLRSGDLRTRDLRKRDDVR
RDQQHIPKTSNQRRRKLRRKEEGEHLAVRGLDEDRRLLIVVGDFNFESTS
SGYRRMVSEGGLRSAANVSTEAAAAEATGWFPPATASDFPAMGPNYPANV
YHAAPKLADDGVVPEKREVLRSFLGDGAAAVNAGDGVAGGVVNDGHGDDA
LGVVSGGGSVVDDVISDDRNAVGGVSVRVGGDGYGGDASAAAAAAAVGEG
GNESGDTVVAGDADNSGALDFVFFSAGGGGISCRSYEVHREFSQERYADG
YPSVAEFEVSCPSLAPE*
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mRNA from alignment at E-siliculosus-1a_F_contig1392:21525..27669-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1392.2321.1 ID=mRNA_E-siliculosus-1a_F_contig1392.2321.1|Name=mRNA_E-siliculosus-1a_F_contig1392.2321.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6145bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1392:21525..27669- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCAGTCAAGGCCCGGTTTCGAGCTCCGCGGGGACGGTGGATTTGGACGG
GCTTGCTGGCGGGAGGCGCGATTTGCGTGCCGCCGGCAGCGAGCTTGCGG
ATGCAACGTCTAAGGTAACTACGATAGAACAACGCCAACAATCGCAATCA
CAACCCACAACCACAACAACGACAACAACAACGACAACAACAACAACAAC
GACCAAAGCAATGTTGCTGTGGCAGAATCGTGCTTGCAGTGTTTGGTGTC
AGGATAAATCACAGCTCAGCCGGTGGCGAGGGAAATTGACCCCACGCGCT
CCCTACTGCTCCGAACAGCAATCGCGTCGGCACAGGGCCGGTCCAAATCG
ATCAGTTTCATTCTTGTGCCAACGTCAACCAACCCGCAGGCGGTGAGGGT
GGTGAACTTCACAGTGTGTGGATACGGGTCGATCCAATCAAAATCTGTTT
TCATAGCTTTACCAACAAGAACAGTCCAGAAATGAGGGTGGGAACCGGGT
TCGATCCAATGAGTTTCATTTTCGTACCAAAATCAACCGGCCAGCAGGCG
GTGAGGGTGGTGAACTTCAACGTGTACATGGGCTACGACCGAAGGGGGGA
GGACAATGCCTTCCGGGTGGGCAGGCTTCTGAAGGACCTTGAGGCCGACA
TTGCCGGATTGCAGGTGAATATCGTTTTTGTTGTTCAATTTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTGGTTGTTGCTGCTGGTGTTTGTTGTGATT
GATGTTGTTGTCGTTGTCGTTGTTGTTGTTGTTGTCGCCCTTGCGAATCG
CGTGCCCGCCTAGCACAGAGGGATGTCTCGCAGTTTTAGGAGTGTCACGG
TTTCAGGTTCCGCGATCGCCACCCTCAGCAGCAACAGACTCGACGATCCA
GGCATCGTTTCTGCCCTTTGTCCTCGAGCGCGCTGCTCTGCAGAGGACGA
AAACATTCCCCGAGCCGCGGCCAAAGAGTTCTGGGGTGTCTGTTGGTAGG
TTAAGTGGAGGGCCCTCAATCCGTCGGTTTATGCCCGGACCATCGACCGG
CACTATTCAGAGGGACCGGCGCTATTCAATCGATAGAATTACTCGGTGAT
TCAGTCTGTGAACAGCAATTTCACCGGCGCTTTACTGGGCCACCGGCGCC
TATTATTTGGCGATATTGACGCCCTCCCCACTGTAAAAATATTCCCACAC
CTGGGGAGGAACCGATCGGATCAACGCTCTACGTATGCACCGTAGGTGAC
ACCACGCAAGATATCACACCCTTCCCTGGGAGTAATGCTTCGTGGACGCG
TGGTCAAGGGTCTATCCGCTAAGGCGCGCAAACCATGCGTACCCCTCTAA
TATTCCGCCGTCTCGGTTGGGTTGTAGGAAACCGGGCTGATGCCACTACA
ACATCCAATCCAGTGCAACTCCCCCCGCCCAATGCGCTCCCTGGGAACAT
TGCTCCGTGCTCTCGAGGACGCGTGGTCAATGATCTAACCGTTAAGGCAT
GCAAGCCACGAGTACGCCCCCCCCCCCCTCCAAAATGGAAACCATCGCAT
GGTAGGTAACACAATGCTCCGGCCTCTCGAGGATGCGTGGTCAATGGTCC
TAATACGTAGGGCATGCAACACATGCACACGCTACCCTTGCTATTTCTAT
TTCCCCCCCAACAACTAAGGCATGCAAAACATGAGTACCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCACCAACACCCGCCCGCCCCCCACCCGCCACCAC
AACCCNNNNNNNNNNCACAACCCCCCCCTTCCCCCCCCCCACCCCCCCCC
CCCCCCGAGCGGGCGCAAAAACCCCGCGGCCCCCCCCCCCCCCCCCCACC
CGAACCTCGTGATGTGAGAGCCTTCTCCGGCGAGAACCCGACGTGTCGCT
CCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGCCAAACCACCACTTAC
TAATTACGGCATGCACGGCTCGAAGTACACCCTGACCTCCCGCCCCTAAA
CATACGAGCAATGGTTCGTGGAAGCATGGTCAATGGTCTAACCCGCTGTC
TCGGTTGAGTTGTAGGACACCGGGTTGATGCCACCACAACATCCAATCCA
GGGCAAGTCCCCCCGCCCCATGATATCACCATATTGGTCGTATGCTTCTT
TAGGAAACCGGGCTGATGCGATTGACCCTGGGCAACCGGCACTACGCCGG
GGCGGTGGCGAGGGCTGCGGGGATGGTGCTGGCCGCGGCGGCGCCGGTGG
CGGAGGACACCTGGGGCTGCGCGATCTTGTCGCGCCTTCCGGTGCTCAGG
TGGGCACACAGATGAGGCAGTCAAGTCATACACACGTTTTTCTTTTTTTT
ATTTCACGTTTTGTGGGCCCGTTTTTTCTTTTGTGTGTGTCTTAAATATT
AGCATCGTCCGCGCTGACCGGCTGACCAATGAAAAACCGTCAGTCCTCAG
TGCGGTGTGTGTGTGCGTGTTTTAGGCGGTGTGCTGGTGCTCGGATGCGC
ACTTAAGATGAGGCAGTCGAGTCAGTCGTTCAGTGTGTCGCTTCCGCACG
TTTCTGTTTTTATTTTTTGTTGCACGTGCGGCGGGCCGTGTTTGTCTGTT
TTCATTTTAGGCCGTGTGTGCGTTGCCAACAAACTATAATTGTTTGCGTA
AGAGTTGATGAAACACCACACACACAGAGATATGGTATGATGAAGCTCTC
TCGTTGTACGTACTTGTCTTTGTTTTTCGTTGTACCGTCCGCCTGCGCGT
ACCGTACGTTCGGCAAAAGAGAACCCCCCCATATAAGATCACACAGCCCC
CTACACCGATATTATATTTTTTCTACCCCAAGTTACCCCTGGGGTGTGTC
TTCTTGCATCGTACCACGGTACGTACCACGGTACGTACCACCGTACGGTA
CAGTTGTGCACCGTATACGGCACAAGATAGCACCCTCTCACACAGTGTAA
ACACCCGAGAATAATATTTTTTTCATCCAAAAAGTTTATCCCCGGGATGT
ATTTTCTTTCGTCGTTTACGGTACTCAACCTGTGAAAAACCTCTCCAGTG
GAAAGTACCGCAGGAGGGAGGGGTGGATGGGGGCCTCAGGGAGAGGAACC
CTTCTCGGGTTGGAGAAAACAGCACAACAAGTGCTGTCAGCGCTGATCTG
AAACGAAGACAACAAAAAAACAAGAAAGAATGTCGAACCTGTTGCAGCCT
GGCGCAGACAGCCCATGCCGTCGTACATCGACGACGCTCGGTTCACACGT
GCCGGAAGATGCTCGAGAACATTGCCCCGCTCTTACCATATCTTATCGTG
TTGATAGGCCTGTACTCCGTATTTTTTTTTTTTTTGCGATTTAGGTATAC
TATCTTTCCTCCATCATTTTCAGTTTACCAAAAAAAATCGACAGCGAAAA
TATCAGGAAATCGCCTACGGAGTACAGGCCTAAAGCCGTTTTGATTTCTT
GCCGCGGCGTGGTTTTGCAGCTGGGGGTGGAGGAGGCTTCCGAGGGGCCC
GGGGGAGAACGCCTGCGAAGTTCACGCCACCCTGTCGCTGGGGGAGGGGA
TGGGGGTCGCGACCGTTGTCAATGTGCACCTCGGCAACGAGGGCGATACA
GAAAAACAGGTAGGTGAAAATGTTTGTACAGTGTTTAGTGGGCCGGCCCT
GAATAGTAGGGCAATACCGAAAAACAGGTAAGGTGGAAACGTTTGGACAG
TGATGGCCGGCCCTGTATAGTGCTGGTCGAATAGTGCCGGGTGCCCGGTG
TAGTGCCGGCGTCTTCGTCTCGCACACGCTGAAGTACCAAATGGTTCTGA
GAAAGGAGAGTGAGGGAAATGCAGCCAAACAGCCAAACAGTGGTCGTAGA
CCCACATGCATGCTCGTGTCTCCTCCGAACCCTCTCTCGTCCGCCTTTTT
TCTAGAAGACGAACGGGTAAGATCACCGAACCCGAAAGACGCGAAAAAGC
CTTGGAGCAATACACCGAGGTTTTCTTCCGCGTAGACGTACAACCTGGGC
CGACGAAGAAGCTATTACACACTCGCTCGTCCCGCCGTAACTTTAATTGA
TACACATTTCTAGCGGAACCGGTGCAGGAGGCCCCACCCAACCTTACATT
GGATGATGTGGGTAAGGGACAAGAATATACCATAATCTCTGATTTGAAAC
GAATCCAGATTTCGGAACGAAATCGGGAAGAGGCAGATATCCCATGAAGC
ATGTTGAAAATGAGGACTCTACGTTGTTCAGCCCCCTTTCTCTCTACCCC
AATACGCCGGAGTAGAGGAGAAAGAAAATATTTGGGACCACCCCACCCGC
CGTAGTAATACTTATTCTGGTCAGGAACTTGCGGTTCCTTCAAACGCTTT
ATGTCCGGGCATAAAGCCGTGCGCCCAGCCCAAAGAATTTGTTCACGGCG
AGGCCCTCCTGTCGGTGCAGGAGGCCTCACCCAACCAAATCCAATACTTG
TATTGAATGATCTGGGTGAGGGACAAGCATACAGCAGGAAACGTGCAAGA
GCGAAAAGAACCCGATTGCCGTAGATGAGGCAAGAAGCACACACCCCCGT
TGGAACGATTTTCAAGGCTCGATGTCCGTCCGCACAGTAGAATGAGCGGC
AGCGCCGACAAATGGTGACGTTGAGGAGCCGTCTCATCCGGAGCGTTCCG
ACAACGTAGTATCGTTTCATTTGCCCGTAATCTTCCATCGTGGAGTAGAA
GTCGAGCTTTGAAAATCGGTCCGGGGTGTGTGTAATCTTCCGTCACCTAC
GGTGTGCTAGCGGTTTCTCTACCTCGGAGTAGAGTTGGTGTTCCATCCCC
TTCTCCTGACGGATGCGTGGAATAGCCATCACCTCCCTTCAAGTAGACGG
GAAAGTCGCAAATGAGGATGCTCATTCTCCCTGCCCCCCATCCTACACTG
TCTGAAGACTTTTCTCGACCATGCGGGGAAAATTGAAATTTGCACCCTGC
CCCACTCAGAAGGATTTGGCCATCGGTGAGTTGGTCTTGTGGGAACAATG
CTCCGTCCTCTAGACGACGCGTGGTCAAAGGGTCCAACAAACAGCTACAT
ATGGCGTGCAAACAAAACATGAGTACGACCTCCCGCCAGTCGTAAGGTTC
GTATCTTTACGGCCGAGCCAGGCCGACAACAACGATCTCACCGAACAAGA
ATATTCCTCGAAGTCATCCCCCGAACACCCGCACTCCCCGACATGTCCAC
ACTCGTCCCCCGTCGCTTTCCTCATCGTCGTTTCTCCCGTTCGCCTCTTT
TTGTTAGGTGACCGGTCTCCTGTCGCTGCTGGAGGATCTCCGCTCAGGAG
ATCTACGAACGAGAGATCTACGAAAGCGAGACGACGTCCGCAGAGACCAA
CAACATATACCGAAGACGAGCAACCAGCGACGGCGGAAACTCCGAAGAAA
AGAAGAAGGAGAACATCTCGCGGTACGCGGCTTGGACGAAGATCGGAGAT
TGCTGATCGTTGTCGGAGACTTCAACTTCGAATCCACCTCGTCCGGTTAC
AGGCGCATGGTATCCGAGGGCGGTCTTCGATCCGCCGCAAATGTTTCCAC
CGAAGCAGCAGCAGCAGAAGCGACAGGCTGGTTTCCCCCCGCAACCGCTT
CTGATTTCCCCGCAATGGGTCCGAATTACCCCGCGAATGTCTATCACGCC
GCACCGAAACTAGCCGACGATGGCGTCGTCCCCGAGAAACGCGAAGTGCT
TCGGAGCTTTCTCGGTGACGGTGCTGCCGCTGTCAACGCCGGCGACGGTG
TCGCAGGTGGTGTTGTAAACGATGGTCACGGCGATGATGCTCTAGGTGTC
GTTAGTGGTGGCGGTAGTGTTGTTGATGACGTCATCAGCGACGATCGAAA
CGCTGTCGGCGGCGTTTCGGTTCGCGTCGGTGGCGATGGATACGGCGGAG
ATGCTTCTGCTGCTGCTGCAGCAGCAGCTGTTGGAGAGGGGGGCAATGAG
AGTGGTGACACCGTTGTTGCCGGAGACGCTGACAACAGCGGCGCCCTAGA
TTTCGTGTTCTTTTCCGCCGGAGGCGGCGGAATCTCGTGCCGGAGCTACG
AGGTCCATCGAGAGTTTTCCCAGGAACGGTACGCGGACGGGTACCCCTCC
GTTGCCGAGTTCGAGGTCTCGTGCCCCTCACTCGCGCCTGAGTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1392:21525..27669-

>mRNA_E-siliculosus-1a_F_contig1392.2321.1 ID=mRNA_E-siliculosus-1a_F_contig1392.2321.1|Name=mRNA_E-siliculosus-1a_F_contig1392.2321.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2808bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1392:21525..27669- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCAGTCAAGGCCCGGTTTCGAGCTCCGCGGGGACGGTGGATTTGGACGG
GCTTGCTGGCGGGAGGCGCGATTTGCGTGCCGCCGGCAGCGAGCTTGCGG
ATGCAACGTCTAAGAGCAGTCAAGGCCCGGTTTCGAGCTCCGCGGGGACG
GTGGATTTGGACGGGCTTGCTGGCGGGAGGCGCGATTTGCGTGCCGCCGG
CAGCGAGCTTGCGGATGCAACGTCTAAGGCGGTGAGGGTGGTGAACTTCA
ACGTGTACATGGGCTACGACCGAAGGGGGGAGGACAATGCCTTCCGGGTG
GGCAGGCTTCTGAAGGACCTTGAGGCCGACATTGCCGGATTGCAGGCGGT
GAGGGTGGTGAACTTCAACGTGTACATGGGCTACGACCGAAGGGGGGAGG
ACAATGCCTTCCGGGTGGGCAGGCTTCTGAAGGACCTTGAGGCCGACATT
GCCGGATTGCAGGAAACCGGGCTGATGCGATTGACCCTGGGCAACCGGCA
CTACGCCGGGGCGGTGGCGAGGGCTGCGGGGATGGTGCTGGCCGCGGCGG
CGCCGGTGGCGGAGGACACCTGGGGCTGCGCGATCTTGTCGCGCCTTCCG
GTGCTCAGGAAACCGGGCTGATGCGATTGACCCTGGGCAACCGGCACTAC
GCCGGGGCGGTGGCGAGGGCTGCGGGGATGGTGCTGGCCGCGGCGGCGCC
GGTGGCGGAGGACACCTGGGGCTGCGCGATCTTGTCGCGCCTTCCGGTGC
TCAGCTGGGGGTGGAGGAGGCTTCCGAGGGGCCCGGGGGAGAACGCCTGC
GAAGTTCACGCCACCCTGTCGCTGGGGGAGGGGATGGGGGTCGCGACCGT
TGTCAATGTGCACCTCGGCAACGAGGGCGATACAGAAAAACAGCTGGGGG
TGGAGGAGGCTTCCGAGGGGCCCGGGGGAGAACGCCTGCGAAGTTCACGC
CACCCTGTCGCTGGGGGAGGGGATGGGGGTCGCGACCGTTGTCAATGTGC
ACCTCGGCAACGAGGGCGATACAGAAAAACAGGTGACCGGTCTCCTGTCG
CTGCTGGAGGATCTCCGCTCAGGAGATCTACGAACGAGAGATCTACGAAA
GCGAGACGACGTCCGCAGAGACCAACAACATATACCGAAGACGAGCAACC
AGCGACGGCGGAAACTCCGAAGAAAAGAAGAAGGAGAACATCTCGCGGTA
CGCGGCTTGGACGAAGATCGGAGATTGCTGATCGTTGTCGGAGACTTCAA
CTTCGAATCCACCTCGTCCGGTTACAGGCGCATGGTATCCGAGGGCGGTC
TTCGATCCGCCGCAAATGTTTCCACCGAAGCAGCAGCAGCAGAAGCGACA
GGCTGGTTTCCCCCCGCAACCGCTTCTGATTTCCCCGCAATGGGTCCGAA
TTACCCCGCGAATGTCTATCACGCCGCACCGAAACTAGCCGACGATGGCG
TCGTCCCCGAGAAACGCGAAGTGCTTCGGAGCTTTCTCGGTGACGGTGCT
GCCGCTGTCAACGCCGGCGACGGTGTCGCAGGTGGTGTTGTAAACGATGG
TCACGGCGATGATGCTCTAGGTGTCGTTAGTGGTGGCGGTAGTGTTGTTG
ATGACGTCATCAGCGACGATCGAAACGCTGTCGGCGGCGTTTCGGTTCGC
GTCGGTGGCGATGGATACGGCGGAGATGCTTCTGCTGCTGCTGCAGCAGC
AGCTGTTGGAGAGGGGGGCAATGAGAGTGGTGACACCGTTGTTGCCGGAG
ACGCTGACAACAGCGGCGCCCTAGATTTCGTGTTCTTTTCCGCCGGAGGC
GGCGGAATCTCGTGCCGGAGCTACGAGGTCCATCGAGAGTTTTCCCAGGA
ACGGTACGCGGACGGGTACCCCTCCGTTGCCGAGTTCGAGGTCTCGTGCC
CCTCACTCGCGCCTGAGTGAGTGACCGGTCTCCTGTCGCTGCTGGAGGAT
CTCCGCTCAGGAGATCTACGAACGAGAGATCTACGAAAGCGAGACGACGT
CCGCAGAGACCAACAACATATACCGAAGACGAGCAACCAGCGACGGCGGA
AACTCCGAAGAAAAGAAGAAGGAGAACATCTCGCGGTACGCGGCTTGGAC
GAAGATCGGAGATTGCTGATCGTTGTCGGAGACTTCAACTTCGAATCCAC
CTCGTCCGGTTACAGGCGCATGGTATCCGAGGGCGGTCTTCGATCCGCCG
CAAATGTTTCCACCGAAGCAGCAGCAGCAGAAGCGACAGGCTGGTTTCCC
CCCGCAACCGCTTCTGATTTCCCCGCAATGGGTCCGAATTACCCCGCGAA
TGTCTATCACGCCGCACCGAAACTAGCCGACGATGGCGTCGTCCCCGAGA
AACGCGAAGTGCTTCGGAGCTTTCTCGGTGACGGTGCTGCCGCTGTCAAC
GCCGGCGACGGTGTCGCAGGTGGTGTTGTAAACGATGGTCACGGCGATGA
TGCTCTAGGTGTCGTTAGTGGTGGCGGTAGTGTTGTTGATGACGTCATCA
GCGACGATCGAAACGCTGTCGGCGGCGTTTCGGTTCGCGTCGGTGGCGAT
GGATACGGCGGAGATGCTTCTGCTGCTGCTGCAGCAGCAGCTGTTGGAGA
GGGGGGCAATGAGAGTGGTGACACCGTTGTTGCCGGAGACGCTGACAACA
GCGGCGCCCTAGATTTCGTGTTCTTTTCCGCCGGAGGCGGCGGAATCTCG
TGCCGGAGCTACGAGGTCCATCGAGAGTTTTCCCAGGAACGGTACGCGGA
CGGGTACCCCTCCGTTGCCGAGTTCGAGGTCTCGTGCCCCTCACTCGCGC
CTGAGTGA
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