mRNA_E-siliculosus-1a_F_contig1386.2292.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: D7FRF8_ECTSI (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF8_ECTSI) HSP 1 Score: 510 bits (1314), Expect = 3.730e-178 Identity = 243/245 (99.18%), Postives = 244/245 (99.59%), Query Frame = 3
Query: 90 MASAACCAAGPPVECDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 824
MASAACCAAGPPV CDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELA+DVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL
Sbjct: 1 MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 245
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: A0A835Z8A5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A5_9STRA) HSP 1 Score: 291 bits (745), Expect = 3.350e-92 Identity = 144/245 (58.78%), Postives = 170/245 (69.39%), Query Frame = 3
Query: 90 MASAACCAAGPPVECDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 824
MAS ACC AGPP+ DY PKGTI+ IGD + YF GSGP+A+ +VYDIFG SPQ KQVCD A AGF+VAMPDF +G PW LENFPPKD+ E AW G ++ IRP AHM+E GA+V G GFCWGG IA KAA A+G V AG VH A ++ EL E V VP+ ++PSG+DPD P+KEVLDKKPFG C Y RF+DMHHGFCAARGDW+ + A RA+EA+ F NL
Sbjct: 1 MASPACCKAGPPISSDYEPKGTIATIGDQEVYFSGSGPRAICIVYDIFGLSPQAKQVCDKLADAGFSVAMPDFARGQPWLLENFPPKDQGEFMAWVGKHD-FDAVIRPDMERVQAHMRETMGAKVFGAIGFCWGGSIATKAAC----AQGLVAAGAAVHYAFITPELVEGVCVPLCLLPSGDDPDTAPLKEVLDKKPFGAACVYHRFEDMHHGFCAARGDWSQPLIAQRASEAVAMLSDFMDKNL 240
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: A0A836BBU2_9CHLO (DLH domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBU2_9CHLO) HSP 1 Score: 198 bits (504), Expect = 2.210e-56 Identity = 111/241 (46.06%), Postives = 135/241 (56.02%), Query Frame = 3
Query: 96 SAACCAAGPPVECDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLS--AELAEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKF 809
S AC AAG PV Y PKGT +K G D Y G+G LV+V DIFGF Q+ QV D FA AGFNV D G PW ++ FPPK + W G G W+ ++P AVA +KE GA G GFCWG IAM+A E G HPA+ A AE V+ PV+++P+ D D PVK VLD++P+G KC Y+RFDD HGF AARGDW+ A A +AI F
Sbjct: 4 SEACTAAGAPVVSSYEPKGTFTKAGSTDVYRSGAGALGLVIVPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDKFPPKPEHDFMGWIGREGSWQ-KLQPQVAAAVAKLKE-AGATKFGCIGFCWGVSIAMQAGQ-----EATFSGVGGAHPALFGKDAAFAEKVQCPVVLLPAQGDADTAPVKAVLDRRPYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADF 237
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: A0A0L0HMK7_SPIPD (DLH domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMK7_SPIPD) HSP 1 Score: 197 bits (500), Expect = 1.770e-55 Identity = 109/250 (43.60%), Postives = 147/250 (58.80%), Query Frame = 3
Query: 87 NMA---SAACCAAGPPVECDYTPKGTISKIGDVDTYFVGS-GPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 824
NMA S ACC PP +Y PKG +S +GD+ TYFVG G +A++++YDIFGF P Q D AA GF VA PDF +GNPWPLE P + EL A + I +V GAE +G GFCWG + A++A + EG V A HP+ L+ E+ +DVK P+ ++PS ++PD +P+ E L +KPF DK + RFDDMHHG+CAAR D++N A R+ EA+ +F+ L
Sbjct: 23 NMAGEHSKACCEL-PPFASNYQPKGQVSTVGDLPTYFVGEKGKRAIILIYDIFGFHPNTHQFADELAAKGFFVAEPDFYRGNPWPLEKVPIQ-LPELMAHLEQHVPESRMLAD--IGSVCRYLRSNGAESIGTLGFCWGAIYAIRA-----NVEGLVDASAAAHPSRLTVEIVKDVKGPLALLPSKDEPDLIPLMEALKEKPFVDKNVHVRFDDMHHGWCAARSDYSNPANARRSREALQIMARFFDETL 263
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: A0A2K3CV50_CHLRE (DLH domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CV50_CHLRE) HSP 1 Score: 196 bits (497), Expect = 2.580e-55 Identity = 112/241 (46.47%), Postives = 136/241 (56.43%), Query Frame = 3
Query: 96 SAACCAAGPPVECDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLS--AELAEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKF 809
S AC AAG PV DY PKGT +K G D Y GSG +V+V DIFGF Q+ QV D FA AGFNV D G PW + FPPK + W W+ ++P AVA +KE GA G GFCWG IAM+A D GV G HPA+ A+ AE V+ PV+++P+ D D PV++VLDK+P+G KC Y+RFDD HGF AARGDW A A +AI F
Sbjct: 4 SEACTAAGAPVVSDYEPKGTFTKAGSTDVYHSGSGALGVVIVPDIFGFGHKQVFQVADRFADAGFNVCAIDPFHGKPWTKDRFPPKPEHDFMGWLSREASWD-KLKPQIDAAVAKLKEG-GASKFGCIGFCWGVSIAMQAGQ-DGHTFSGV---GGAHPALFGHDADFAEKVQCPVVLLPAQGDADTGPVQKVLDKRPYGSKCVYQRFDDQTHGFVAARGDWTKPEVAAAAGKAIGIMTDF 238
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: A0A1Y1Y5T6_9FUNG (Alpha/beta-hydrolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y5T6_9FUNG) HSP 1 Score: 195 bits (496), Expect = 3.100e-55 Identity = 104/247 (42.11%), Postives = 138/247 (55.87%), Query Frame = 3
Query: 93 ASAACCAAGPPVECDYTPKGTISKIGDVDTYFVG--SGPKALVVVYDIFGFSPQLKQVCDMFAAA-GFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 824
A+ ACC+ PPV DY PKG+I KI D+ YFVG KA+VV+YDIFGF P KQ CD+ F VA+PDF +G PW P+DR L W + G W+ + +P H+ G+ GV GFCWG + + A +G A +HP++L+ E AE + P+L++PS ++PD E+L KK FG KC Y FDDMHHGF AARGD+ + R EAI F+ N+
Sbjct: 3 ANKACCSL-PPVVSDYQPKGSIEKIDDLSVYFVGPKDAKKAVVVIYDIFGFHPNTKQFCDILGEKFNFRVALPDFFRGKPWDHTRMTPEDRPALMQWITSVGSWDNT-KPDLEKVKKHLSSS-GSTDFGVVGFCWGAKMGVLATR-----DGSFSAASLIHPSLLADEDAELAEAPILLIPSKDEPDLTKFVEILKKKSFGSKCSYHLFDDMHHGFAAARGDYNDPANVKRTTEAIQLTGDFFQNNV 241
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: A0A835W382_CHLIN (DLH domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W382_CHLIN) HSP 1 Score: 195 bits (496), Expect = 3.610e-55 Identity = 112/241 (46.47%), Postives = 136/241 (56.43%), Query Frame = 3
Query: 96 SAACCAAGPPVECDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAEL--AEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKF 809
S AC AAG PV +Y PKGT K G D Y GSG +V++ DIFGF Q+ QV D FA AGFNV D G PW ++ FPPK + W G W+ ++P AVA +K GA G GFCWG IAM AA D GV G HPA+ +L AE V+ PV+++P+ D D PVK+VLDK+P+G KC Y+RFDD HGF AARGDW+ A A AI F
Sbjct: 4 SEACTAAGAPVVSNYEPKGTFEKAGSADVYRSGSGALGVVIIPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDRFPPKPEHDFKGWLGREAGWD-KLKPQVDAAVAKLKA-AGATKFGCIGFCWGVSIAM-AAGQDGHTFSGV---GGAHPALFGHDLDYAEKVQCPVVLLPAQGDADTAPVKKVLDKRPYGTKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGRAIGLMADF 238
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: A0A835W025_CHLIN (DLH domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W025_CHLIN) HSP 1 Score: 191 bits (486), Expect = 3.430e-53 Identity = 110/241 (45.64%), Postives = 138/241 (57.26%), Query Frame = 3
Query: 96 SAACCAAGPPVECDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAEL--AEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKF 809
S AC AAG PV +Y PKGT + G D Y GSG LV+V DIFGFS Q+ QV D FA GFNV + D GNPWP+E FPPK + W G W +RP AVA +KE A G GFCW IAM+A +P G GG HP++ +L AE V+ PV+++P+ D D P+K++LD++ +G KC Y+RFDD HGF AARGDW+ A A AI +F
Sbjct: 4 SEACTAAGAPVVSNYEPKGTFERAGSTDVYRSGSGALGLVLVPDIFGFSHKQVFQVADRFAETGFNVCVIDPFHGNPWPMEKFPPKPEHDFKGWLTREGGWG-KVRPHVHDAVAKLKE-ASATKFGCIGFCWSVSIAMQAGQ-EPTFSG---VGGP-HPSLFGHDLDYAEKVQCPVVLLPAEGDGDTAPIKKILDRRSYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGRAIGLMAEF 237
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: A8J3U5_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J3U5_CHLRE) HSP 1 Score: 191 bits (485), Expect = 6.390e-53 Identity = 106/241 (43.98%), Postives = 134/241 (55.60%), Query Frame = 3
Query: 96 SAACCAAGPPVECDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAEL--AEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKF 809
S AC AAG PV Y PKGT + G + Y GSG LV+V D+FGF+ Q+ QV D FA AGFNV + D GNPWP++ FPPK + W W +RP VA +KE GA G GFCWG IAM+A E G HPA+ +L E V+ PV+++P+ D D P+K++LD++P+G KC Y+RFDD HGF AARGDW A A +AI F
Sbjct: 6 SEACAAAGAPVVSTYEPKGTFERAGSTEIYHSGSGALGLVMVPDVFGFAHKQVFQVADRFADAGFNVCVMDPFHGNPWPMDKFPPKPEHDFQGWLTREAGWG-KMRPHVHDVVAKLKEG-GASKFGCIGFCWGVSIAMQAGQ-----ETTFSGVGGAHPALFGHDLDYTEKVQCPVVLLPAQGDADTAPIKKILDRRPYGSKCVYQRFDDQTHGFVAARGDWTKPEVAAAAGKAIGIMADF 239
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Match: A0A836BBS3_9CHLO (DLH domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBS3_9CHLO) HSP 1 Score: 189 bits (481), Expect = 2.310e-52 Identity = 105/241 (43.57%), Postives = 135/241 (56.02%), Query Frame = 3
Query: 96 SAACCAAGPPVECDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAEL--AEDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKF 809
S AC AAG PV Y PKGT + G D Y +G+G +V+V DIFGF Q+ QV D FA AGFNV + D GNPW ++ FPPK + W W +RP AVA +KE GA G GFCWG IAM+A E G HP++ +L AE V+ PV+++P+ D D P+K++LD++ +G KC Y+RFDD HGF AARGDW+ A A +AI F
Sbjct: 4 SEACTAAGAPVVSTYEPKGTFERAGSTDVYLIGAGALGVVLVPDIFGFGHKQVFQVADRFAEAGFNVCVMDPFHGNPWTMDKFPPKPEHDFKGWLAREAGWGR-MRPHVHDAVAKLKE-AGATKFGCIGFCWGVSIAMQAGQ-----EATFSGVGGPHPSLFGHDLDFAEKVQCPVVLLPAEGDADTAPIKKILDRRAYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADF 237 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1386.2292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1386.2292.1 >prot_E-siliculosus-1a_F_contig1386.2292.1 ID=prot_E-siliculosus-1a_F_contig1386.2292.1|Name=mRNA_E-siliculosus-1a_F_contig1386.2292.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=246bp MASAACCAAGPPVECDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFback to top mRNA from alignment at E-siliculosus-1a_F_contig1386:25307..32307- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1386.2292.1 ID=mRNA_E-siliculosus-1a_F_contig1386.2292.1|Name=mRNA_E-siliculosus-1a_F_contig1386.2292.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7001bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1386:25307..32307- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1386:25307..32307- >mRNA_E-siliculosus-1a_F_contig1386.2292.1 ID=mRNA_E-siliculosus-1a_F_contig1386.2292.1|Name=mRNA_E-siliculosus-1a_F_contig1386.2292.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1476bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1386:25307..32307- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |