mRNA_E-siliculosus-1a_F_contig1384.2285.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI) HSP 1 Score: 596 bits (1537), Expect = 3.060e-213 Identity = 305/313 (97.44%), Postives = 308/313 (98.40%), Query Frame = 3
Query: 198 MLLLRLCTRQSFLRRRIGNTNMACREYGAEAPARCCAVVYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTEEEALAAISRLSSERK 1136
MLLLRLCTRQ FLRRRIGNTNMACREYGAEAPARCCAVVYVSEGRN+TLLDALAEAA TTA G AGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEA HPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQR+DGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLT+EEALAAISRLSSERK
Sbjct: 1 MLLLRLCTRQPFLRRRIGNTNMACREYGAEAPARCCAVVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEAAHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAAISRLSSERK 313
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A4D9D4Y2_9STRA (FTCD_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y2_9STRA) HSP 1 Score: 219 bits (558), Expect = 3.140e-65 Identity = 124/270 (45.93%), Postives = 167/270 (61.85%), Query Frame = 3
Query: 303 CAVVYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEH-EATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATID-ADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTEEEALA 1106
C VYVSEGRN+ LLD L A T++ G L+++F D YHR+ FT+GGA P+ V ++ V A +D+ +H +ATHPR+GVVDHVS HPLG E+A+KA A+ +G +PVLLYG NN + LA+VRRST YF A + AD GP +VD G+ G P V N+NI L T +K++A+ VT+++R +DGG VE+LTL+ E G E ACNLL T TA VL +A + A G+ V + Y G+T +E LA
Sbjct: 16 CCKVYVSEGRNHALLDRLTHLARTSSPGLCALVQRFSDAVYHRSNFTLGGA-PEPVVEVALRVINEAFLHVDMTKHVDATHPRVGVVDHVSFHPLGNT-PLEVARKAACALGQRVGGKWPVPVLLYGSCNN-KSLADVRRSTSYFKKMAFDAQVPHADYGPVDVDPRLGLLCCGAVPYVQNFNIRLKTSEKQIAAMVTKAVRSRDGGPVGVEALTLRHEGGHMEVACNLLDVDTTDTARVLKLATDAARKAGVEVEEAYTVGMTGDEILA 282
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK) HSP 1 Score: 205 bits (522), Expect = 2.670e-59 Identity = 122/277 (44.04%), Postives = 161/277 (58.12%), Query Frame = 3
Query: 312 VYVSEGRNNTLLDALAEAAW--TTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVG-IRVVDHYETGLTEEEALAAISRLSSER 1133
+YVSEGR+ ++ L E A T T + L+ +F DP Y+RT F G +V+R EV+ A+ +++L EHEA+HPRIGVVDH+SVHPLG + A++A I G + G+P+L YG LN G+RL+ VRRST YF GG+ + ADLGP VD RG VG P V NYN+ D++ + R+LREKDGGLP VE++ L+ G +EAACNLL VLA A AA G I V Y GLT E ++R + R
Sbjct: 57 LYVSEGRDEQFINELHEMAHNKTGETFDCALVNKFSDPHYNRTSFCFAGHY-SSVSRIIKEVAEVAIESLNLEEHEASHPRIGVVDHISVHPLGE--TMVFAEEAAREIGAYFGTEKGIPILFYGSLN-GKRLSAVRRSTSYFRGGQ-DREVAADLGPRAVDPRRGAMCVGAVPPVLNYNVRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHAGGNYEAACNLLEADRVGPEEVLAAATAAAAAQGGIEVDAAYTIGLTAAEVADRLARALAGR 328
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A8J9WP56_9CHLO (Probable formimidoyltransferase-cyclodeaminase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP56_9CHLO) HSP 1 Score: 197 bits (500), Expect = 1.720e-56 Identity = 117/275 (42.55%), Postives = 161/275 (58.55%), Query Frame = 3
Query: 312 VYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGK-DVGLPVLLYGDLN-NGRRLAEVRRSTPYFVGGE-----------LPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTEEE 1097
VY+SEG LL+ L A +T TG A L+ F D Y+RTGFT+ P +AR +V ++R A+ AIDL H A+HPR+GVVDH+S HPLG + A +A I LG+ ++ +PV LYG + N + LA++RR+ YF G + +P + D GP +D SRG+ATVG P V NYN+LL TDD +L+ ++ R++ + GGLP VE++ L E G E ACNLL ++ V A ++ A GI V D Y TG T EE
Sbjct: 15 VYISEGSKLALLEQLKGVA-STDTGTA-LVHTFIDKPYNRTGFTLASPGPQQLARTAVHLARAALAAIDLRLHSASHPRLGVVDHISCHPLGTGATLSSATEAARLIGAQLGEGELAVPVFLYGSAHKNQQSLADIRRACGYFKGSKQGAFHGASGIIIPPGLQPDYGPEHLDPSRGLATVGAVPFVVNYNVLLKTDDMQLSRQIARAVSSRGGGLPSVEAMALPHEGGV-EIACNLLDAATSSPEAVGAAVQQHALKHGIVVGDAYMTGRTPEE 286
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: I0YZZ2_COCSC (Formiminotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZZ2_COCSC) HSP 1 Score: 196 bits (497), Expect = 4.790e-56 Identity = 118/293 (40.27%), Postives = 169/293 (57.68%), Query Frame = 3
Query: 312 VYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGK-DVGLPVLLYGDLNNGRR-LAEVRRSTPYFVGGE-----------LPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTF---EAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTEEEALAAISRLSSERK*N 1142
VY+SEG +TL+ L A +G+A L+ F D Y+RTGFT+ P +A + V ++R A+ IDL H A+HPR+GVVDH+S HPLG + + A + +I T LG+ ++ +PV LYG + +R LA++RR+ YF G + +PA + D GP+E+D RG+ATVG P V N+NILL TDD +LA ++ R++ + GGLP VE++ L E+G E ACNLL + T V A +E A GI V Y TG T EE + + ++R N
Sbjct: 10 VYISEGLRSTLVQQLKVCADKCISGSA-LVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHAASHPRLGVVDHISCHPLGRDAALTAAAETARSIGTQLGEGELAVPVFLYGSAGSQQRSLADLRRACGYFKGSKQGAFKGASEISMPAGMRPDFGPSELDPRRGLATVGALPWVVNFNILLQTDDLQLARQIARAVSGRGGGLPSVEAMALPHEEGEILGIEIACNLLDVAVSPTEAVAASVQEHADRHGITVGRGYMTGKTPEELCSLAEQALADRTSN 301
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A8HWL3_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWL3_CHLRE) HSP 1 Score: 176 bits (446), Expect = 6.840e-49 Identity = 108/269 (40.15%), Postives = 145/269 (53.90%), Query Frame = 3
Query: 312 VYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDV---GLPVLLYGDLNNGRR-LAEVRRSTPYF----VGG--------ELPATIDA-----DLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGI 1055
VY+SEGR+ L+ L AA AT L+ F+D YHRTGFT+ PD + A V +SR A++ +DL H+A+HPR+GVVDH+++HPLGG G+A A G++ LPV YG + RR LA++RR YF GG +LPA D DLGP A G+ T+G TP V NYN+ LS D A K+ +++ E+ GGLP V+++ LQ DG E ACNLL + A E A G+
Sbjct: 3 VYISEGRDKALIGKLEAAA--QATPGVALVNVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAATHSRGVATTVAGGQEEEVPALPVYFYGHAHPSRRGLADIRRKLGYFRRSPEGGWRGGLEQQQLPAGNDLSAFPPDLGPATASARWGVVTIGATPWVGNYNVPLSGVDMATARKLAKAISERGGGLPGVQAMALQHADGLVEVACNLLDAAAAPPGTLQARLEGIAGAWGL 269
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A090N402_OSTTA (Formiminotransferas, N-and C-terminal subdomains n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N402_OSTTA) HSP 1 Score: 164 bits (415), Expect = 1.460e-43 Identity = 115/308 (37.34%), Postives = 162/308 (52.60%), Query Frame = 3
Query: 306 AVVYVSEGRNNTLLDALAEAAWTTATGN-AGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGK---DVGLPVLLYGDLNNGR-RLAEVRRSTPYFVGGELPA--------TIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTD-------DKRLASKVT------RSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAA--------GVG--IRVVDHYETGLTEEEALAAISRL 1121
AVVYVSEGR +LDA+ A + N L+ F D +Y+RTGFT+ GA D +A +++++++++ ID H+ATHPR+GVVDHVS H L GE + AG A+A +G+ D G+PV LYGD + + LAE+RR YF G + + + GP+E+ + G VG P V NYN+ L+ D+R+ + + + E+ GGLP V+S+ L D E ACNLL T+TA+V E A GVG +RV Y T T E L AI+ L
Sbjct: 32 AVVYVSEGRRTVVLDAIERVARDASLKNRVALVNVFVDREYNRTGFTLAGAHTDGIANTALDIAKKSLELIDFSTHDATHPRLGVVDHVSCHELRGE------RDAGAALARNIGRGLGDQGVPVKLYGDAASDKVGLAEIRRRAGYFSGSKEGRWMGDGGLRELAFEYGPSEMSSKIGFGCVGAVPWVCNYNVPLTFTFDAGVDADERMRRALAFGRAAAKCVSERGGGLPSVQSMALPHGD-RVEVACNLLDMDVTSTADVQRATESTVASINAWDYLGVGSTVRVDQGYVTNQTPESMLEAIAAL 332
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A061R7T0_9CHLO (Formimidoyltransferase-cyclodeaminase-like isoform x1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7T0_9CHLO) HSP 1 Score: 161 bits (408), Expect = 2.050e-43 Identity = 103/263 (39.16%), Postives = 139/263 (52.85%), Query Frame = 3
Query: 312 VYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGL-----PVLLYGDLN-NGRRLAEVRRSTPYFVGGELPATIDA---------DLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGI 1055
VY SEG N LL L + + L+ +F D Y+R+ FT+ A A A+ E+++ A+ A+DL HEA+HPR+GVVDH+S HPL + E A A+A ++G V PV LYG + GRRLA++RRS YF G + A DLGP V GI VG + +TNYNILL+T D K+ R + E+ GGLP V+++ L+ +G E ACNLL + T VL AA GI
Sbjct: 2 VYXSEGXNVKLLKTLEQLV--SGRNGVALVNKFTDTPYNRSSFTLASAGVGEAAVAAAELAKAAICALDLRTHEASHPRLGVVDHISCHPLTAAAAMEDAA----ALARSIGSIVXAEPTPAPVFLYGAAHPEGRRLADLRRSFGYFEGSAXSSWSGAIDDRHLLTPDLGPVXVSPRTGIVAVGASKWITNYNILLNTADLVTGRKIAREVSERGGGLPHVQAMALRHAEGAVEVACNLLDHEATPPPAVLERVRSLAAAHGI 258
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A4S2F9_OSTLU (FTCD_N domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S2F9_OSTLU) HSP 1 Score: 162 bits (411), Expect = 3.750e-43 Identity = 116/312 (37.18%), Postives = 159/312 (50.96%), Query Frame = 3
Query: 306 AVVYVSEGRNNTLLDALAEAAW--TTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGE--GSQEIAQKAGLAIATALGKDVGLPVLLYGDL-NNGRRLAEVRRSTPYFVG-------GELPAT--IDADLGPNEVDASRGIATVGCTPLVTNYNILLS--------------TDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANV-----LAVAEEQA-----AGVGIRVVDHYETGLTEEEALAAISRLSS 1127
AVVYVSEGR +LD + A T L+ FRD +Y+RTGFT+ G D V RA+++V++ ++R +D+ H+ATHPR+GVVDHVS H L GE G+ ++A+ G + T +G+PV LYGD ++G L E+RR + YF G GE D GP++V G VG P V NYN+ L+ T V + + + GGLP V+S+ L G E ACNLL ++TA+V AVAE A AG V D Y T T E + AI + +
Sbjct: 14 AVVYVSEGRRTAVLDVIERVAREATAPRRPVALVNVFRDAEYNRTGFTLAGRDVDDVRRAALDVAQVSLREVDMRAHDATHPRVGVVDHVSCHALAGERAGAAKLAKSIGEGLGT-----LGVPVKLYGDAASDGIGLDEIRRRSGYFSGAAGGRWTGEFAVERGFAFDYGPSDVPEREGFGMVGAVPWVCNYNVPLAFTFADEGLDAETRMTRAMAFGRAVAKRVSARGGGLPSVQSMALPH-GGKVEVACNLLDVDASSTADVQRATAAAVAETDALKILGAGASAMVEDGYVTNQTPESIIRAIDAIDA 319
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A7S1SLQ1_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLQ1_9CHLO) HSP 1 Score: 156 bits (394), Expect = 2.450e-41 Identity = 100/252 (39.68%), Postives = 136/252 (53.97%), Query Frame = 3
Query: 381 TGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASV---EVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVG-----LPVLLYGDLNNG-RRLAEVRRSTPYF---VGGELPATID------ADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETG 1082
T L+ F YHRT FT+ C ++ SV +++ A+ +DL H+ATHPR+GVVDH+S HPLG S + + A LA A+G VG P LYG + G RRLA++RR+ YF GG+ I AD GP +VD GI VG TP V N+N+LL++ D L +++++ ++ GGLP VES+ L+ G E ACNLL K + VL E AA G+ V YE G
Sbjct: 1 TEKVALLNNFGGEPYHRTSFTL---CSPSIHELSVVASSIAKAAIARLDLTVHQATHPRLGVVDHISCHPLGVSAS--LGEAASLA--HAIGSCVGGGPHPAPTFLYGAADGGGRRLADLRRAFGYFDGAAGGQWSGAIRGSEALRADFGPTDVDERVGIVAVGATPWVVNFNVLLNSTDMTLGRSISKAVSQRGGGLPAVESMALRHTGGLIEVACNLLDYKISGPDAVLKRVTELAATEGVEVKQWYEIG 245 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1384.2285.1 >prot_E-siliculosus-1a_F_contig1384.2285.1 ID=prot_E-siliculosus-1a_F_contig1384.2285.1|Name=mRNA_E-siliculosus-1a_F_contig1384.2285.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=314bp MLLLRLCTRQSFLRRRIGNTNMACREYGAEAPARCCAVVYVSEGRNNTLLback to top mRNA from alignment at E-siliculosus-1a_F_contig1384:16193..20421- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1384.2285.1 ID=mRNA_E-siliculosus-1a_F_contig1384.2285.1|Name=mRNA_E-siliculosus-1a_F_contig1384.2285.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4229bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1384:16193..20421- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1384:16193..20421- >mRNA_E-siliculosus-1a_F_contig1384.2285.1 ID=mRNA_E-siliculosus-1a_F_contig1384.2285.1|Name=mRNA_E-siliculosus-1a_F_contig1384.2285.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1884bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1384:16193..20421- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |