mRNA_E-siliculosus-1a_F_contig1384.2285.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1384.2285.1
Unique NamemRNA_E-siliculosus-1a_F_contig1384.2285.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI)

HSP 1 Score: 596 bits (1537), Expect = 3.060e-213
Identity = 305/313 (97.44%), Postives = 308/313 (98.40%), Query Frame = 3
Query:  198 MLLLRLCTRQSFLRRRIGNTNMACREYGAEAPARCCAVVYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTEEEALAAISRLSSERK 1136
            MLLLRLCTRQ FLRRRIGNTNMACREYGAEAPARCCAVVYVSEGRN+TLLDALAEAA TTA G AGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEA HPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQR+DGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLT+EEALAAISRLSSERK
Sbjct:    1 MLLLRLCTRQPFLRRRIGNTNMACREYGAEAPARCCAVVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEAAHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAAISRLSSERK 313          
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A4D9D4Y2_9STRA (FTCD_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y2_9STRA)

HSP 1 Score: 219 bits (558), Expect = 3.140e-65
Identity = 124/270 (45.93%), Postives = 167/270 (61.85%), Query Frame = 3
Query:  303 CAVVYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEH-EATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATID-ADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTEEEALA 1106
            C  VYVSEGRN+ LLD L   A T++ G   L+++F D  YHR+ FT+GGA P+ V   ++ V   A   +D+ +H +ATHPR+GVVDHVS HPLG     E+A+KA  A+   +G    +PVLLYG  NN + LA+VRRST YF      A +  AD GP +VD   G+   G  P V N+NI L T +K++A+ VT+++R +DGG   VE+LTL+ E G  E ACNLL    T TA VL +A + A   G+ V + Y  G+T +E LA
Sbjct:   16 CCKVYVSEGRNHALLDRLTHLARTSSPGLCALVQRFSDAVYHRSNFTLGGA-PEPVVEVALRVINEAFLHVDMTKHVDATHPRVGVVDHVSFHPLGNT-PLEVARKAACALGQRVGGKWPVPVLLYGSCNN-KSLADVRRSTSYFKKMAFDAQVPHADYGPVDVDPRLGLLCCGAVPYVQNFNIRLKTSEKQIAAMVTKAVRSRDGGPVGVEALTLRHEGGHMEVACNLLDVDTTDTARVLKLATDAARKAGVEVEEAYTVGMTGDEILA 282          
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK)

HSP 1 Score: 205 bits (522), Expect = 2.670e-59
Identity = 122/277 (44.04%), Postives = 161/277 (58.12%), Query Frame = 3
Query:  312 VYVSEGRNNTLLDALAEAAW--TTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVG-IRVVDHYETGLTEEEALAAISRLSSER 1133
            +YVSEGR+   ++ L E A   T  T +  L+ +F DP Y+RT F   G    +V+R   EV+  A+ +++L EHEA+HPRIGVVDH+SVHPLG   +   A++A   I    G + G+P+L YG LN G+RL+ VRRST YF GG+    + ADLGP  VD  RG   VG  P V NYN+     D++    + R+LREKDGGLP VE++ L+   G +EAACNLL         VLA A   AA  G I V   Y  GLT  E    ++R  + R
Sbjct:   57 LYVSEGRDEQFINELHEMAHNKTGETFDCALVNKFSDPHYNRTSFCFAGHY-SSVSRIIKEVAEVAIESLNLEEHEASHPRIGVVDHISVHPLGE--TMVFAEEAAREIGAYFGTEKGIPILFYGSLN-GKRLSAVRRSTSYFRGGQ-DREVAADLGPRAVDPRRGAMCVGAVPPVLNYNVRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHAGGNYEAACNLLEADRVGPEEVLAAATAAAAAQGGIEVDAAYTIGLTAAEVADRLARALAGR 328          
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A8J9WP56_9CHLO (Probable formimidoyltransferase-cyclodeaminase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP56_9CHLO)

HSP 1 Score: 197 bits (500), Expect = 1.720e-56
Identity = 117/275 (42.55%), Postives = 161/275 (58.55%), Query Frame = 3
Query:  312 VYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGK-DVGLPVLLYGDLN-NGRRLAEVRRSTPYFVGGE-----------LPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTEEE 1097
            VY+SEG    LL+ L   A +T TG A L+  F D  Y+RTGFT+    P  +AR +V ++R A+ AIDL  H A+HPR+GVVDH+S HPLG   +   A +A   I   LG+ ++ +PV LYG  + N + LA++RR+  YF G +           +P  +  D GP  +D SRG+ATVG  P V NYN+LL TDD +L+ ++ R++  + GGLP VE++ L  E G  E ACNLL    ++   V A  ++ A   GI V D Y TG T EE
Sbjct:   15 VYISEGSKLALLEQLKGVA-STDTGTA-LVHTFIDKPYNRTGFTLASPGPQQLARTAVHLARAALAAIDLRLHSASHPRLGVVDHISCHPLGTGATLSSATEAARLIGAQLGEGELAVPVFLYGSAHKNQQSLADIRRACGYFKGSKQGAFHGASGIIIPPGLQPDYGPEHLDPSRGLATVGAVPFVVNYNVLLKTDDMQLSRQIARAVSSRGGGLPSVEAMALPHEGGV-EIACNLLDAATSSPEAVGAAVQQHALKHGIVVGDAYMTGRTPEE 286          
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: I0YZZ2_COCSC (Formiminotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZZ2_COCSC)

HSP 1 Score: 196 bits (497), Expect = 4.790e-56
Identity = 118/293 (40.27%), Postives = 169/293 (57.68%), Query Frame = 3
Query:  312 VYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGK-DVGLPVLLYGDLNNGRR-LAEVRRSTPYFVGGE-----------LPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTF---EAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTEEEALAAISRLSSERK*N 1142
            VY+SEG  +TL+  L   A    +G+A L+  F D  Y+RTGFT+    P  +A + V ++R A+  IDL  H A+HPR+GVVDH+S HPLG + +   A +   +I T LG+ ++ +PV LYG   + +R LA++RR+  YF G +           +PA +  D GP+E+D  RG+ATVG  P V N+NILL TDD +LA ++ R++  + GGLP VE++ L  E+G     E ACNLL    + T  V A  +E A   GI V   Y TG T EE  +   +  ++R  N
Sbjct:   10 VYISEGLRSTLVQQLKVCADKCISGSA-LVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHAASHPRLGVVDHISCHPLGRDAALTAAAETARSIGTQLGEGELAVPVFLYGSAGSQQRSLADLRRACGYFKGSKQGAFKGASEISMPAGMRPDFGPSELDPRRGLATVGALPWVVNFNILLQTDDLQLARQIARAVSGRGGGLPSVEAMALPHEEGEILGIEIACNLLDVAVSPTEAVAASVQEHADRHGITVGRGYMTGKTPEELCSLAEQALADRTSN 301          
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A8HWL3_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWL3_CHLRE)

HSP 1 Score: 176 bits (446), Expect = 6.840e-49
Identity = 108/269 (40.15%), Postives = 145/269 (53.90%), Query Frame = 3
Query:  312 VYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDV---GLPVLLYGDLNNGRR-LAEVRRSTPYF----VGG--------ELPATIDA-----DLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGI 1055
            VY+SEGR+  L+  L  AA   AT    L+  F+D  YHRTGFT+    PD +  A V +SR A++ +DL  H+A+HPR+GVVDH+++HPLGG          G+A   A G++     LPV  YG  +  RR LA++RR   YF     GG        +LPA  D      DLGP    A  G+ T+G TP V NYN+ LS  D   A K+ +++ E+ GGLP V+++ LQ  DG  E ACNLL         + A  E  A   G+
Sbjct:    3 VYISEGRDKALIGKLEAAA--QATPGVALVNVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAATHSRGVATTVAGGQEEEVPALPVYFYGHAHPSRRGLADIRRKLGYFRRSPEGGWRGGLEQQQLPAGNDLSAFPPDLGPATASARWGVVTIGATPWVGNYNVPLSGVDMATARKLAKAISERGGGLPGVQAMALQHADGLVEVACNLLDAAAAPPGTLQARLEGIAGAWGL 269          
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A090N402_OSTTA (Formiminotransferas, N-and C-terminal subdomains n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N402_OSTTA)

HSP 1 Score: 164 bits (415), Expect = 1.460e-43
Identity = 115/308 (37.34%), Postives = 162/308 (52.60%), Query Frame = 3
Query:  306 AVVYVSEGRNNTLLDALAEAAWTTATGN-AGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGK---DVGLPVLLYGDLNNGR-RLAEVRRSTPYFVGGELPA--------TIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTD-------DKRLASKVT------RSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAA--------GVG--IRVVDHYETGLTEEEALAAISRL 1121
            AVVYVSEGR   +LDA+   A   +  N   L+  F D +Y+RTGFT+ GA  D +A  +++++++++  ID   H+ATHPR+GVVDHVS H L GE      + AG A+A  +G+   D G+PV LYGD  + +  LAE+RR   YF G +            +  + GP+E+ +  G   VG  P V NYN+ L+         D+R+   +       + + E+ GGLP V+S+ L   D   E ACNLL    T+TA+V    E   A        GVG  +RV   Y T  T E  L AI+ L
Sbjct:   32 AVVYVSEGRRTVVLDAIERVARDASLKNRVALVNVFVDREYNRTGFTLAGAHTDGIANTALDIAKKSLELIDFSTHDATHPRLGVVDHVSCHELRGE------RDAGAALARNIGRGLGDQGVPVKLYGDAASDKVGLAEIRRRAGYFSGSKEGRWMGDGGLRELAFEYGPSEMSSKIGFGCVGAVPWVCNYNVPLTFTFDAGVDADERMRRALAFGRAAAKCVSERGGGLPSVQSMALPHGD-RVEVACNLLDMDVTSTADVQRATESTVASINAWDYLGVGSTVRVDQGYVTNQTPESMLEAIAAL 332          
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A061R7T0_9CHLO (Formimidoyltransferase-cyclodeaminase-like isoform x1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7T0_9CHLO)

HSP 1 Score: 161 bits (408), Expect = 2.050e-43
Identity = 103/263 (39.16%), Postives = 139/263 (52.85%), Query Frame = 3
Query:  312 VYVSEGRNNTLLDALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGL-----PVLLYGDLN-NGRRLAEVRRSTPYFVGGELPATIDA---------DLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGI 1055
            VY SEG N  LL  L +    +      L+ +F D  Y+R+ FT+  A     A A+ E+++ A+ A+DL  HEA+HPR+GVVDH+S HPL    + E A     A+A ++G  V       PV LYG  +  GRRLA++RRS  YF G    +   A         DLGP  V    GI  VG +  +TNYNILL+T D     K+ R + E+ GGLP V+++ L+  +G  E ACNLL  + T    VL      AA  GI
Sbjct:    2 VYXSEGXNVKLLKTLEQLV--SGRNGVALVNKFTDTPYNRSSFTLASAGVGEAAVAAAELAKAAICALDLRTHEASHPRLGVVDHISCHPLTAAAAMEDAA----ALARSIGSIVXAEPTPAPVFLYGAAHPEGRRLADLRRSFGYFEGSAXSSWSGAIDDRHLLTPDLGPVXVSPRTGIVAVGASKWITNYNILLNTADLVTGRKIAREVSERGGGLPHVQAMALRHAEGAVEVACNLLDHEATPPPAVLERVRSLAAAHGI 258          
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A4S2F9_OSTLU (FTCD_N domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S2F9_OSTLU)

HSP 1 Score: 162 bits (411), Expect = 3.750e-43
Identity = 116/312 (37.18%), Postives = 159/312 (50.96%), Query Frame = 3
Query:  306 AVVYVSEGRNNTLLDALAEAAW--TTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGE--GSQEIAQKAGLAIATALGKDVGLPVLLYGDL-NNGRRLAEVRRSTPYFVG-------GELPAT--IDADLGPNEVDASRGIATVGCTPLVTNYNILLS--------------TDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANV-----LAVAEEQA-----AGVGIRVVDHYETGLTEEEALAAISRLSS 1127
            AVVYVSEGR   +LD +   A   T       L+  FRD +Y+RTGFT+ G   D V RA+++V++ ++R +D+  H+ATHPR+GVVDHVS H L GE  G+ ++A+  G  + T     +G+PV LYGD  ++G  L E+RR + YF G       GE         D GP++V    G   VG  P V NYN+ L+              T        V + +  + GGLP V+S+ L    G  E ACNLL    ++TA+V      AVAE  A     AG    V D Y T  T E  + AI  + +
Sbjct:   14 AVVYVSEGRRTAVLDVIERVAREATAPRRPVALVNVFRDAEYNRTGFTLAGRDVDDVRRAALDVAQVSLREVDMRAHDATHPRVGVVDHVSCHALAGERAGAAKLAKSIGEGLGT-----LGVPVKLYGDAASDGIGLDEIRRRSGYFSGAAGGRWTGEFAVERGFAFDYGPSDVPEREGFGMVGAVPWVCNYNVPLAFTFADEGLDAETRMTRAMAFGRAVAKRVSARGGGLPSVQSMALPH-GGKVEVACNLLDVDASSTADVQRATAAAVAETDALKILGAGASAMVEDGYVTNQTPESIIRAIDAIDA 319          
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Match: A0A7S1SLQ1_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLQ1_9CHLO)

HSP 1 Score: 156 bits (394), Expect = 2.450e-41
Identity = 100/252 (39.68%), Postives = 136/252 (53.97%), Query Frame = 3
Query:  381 TGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASV---EVSRRAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVG-----LPVLLYGDLNNG-RRLAEVRRSTPYF---VGGELPATID------ADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQREDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETG 1082
            T    L+  F    YHRT FT+   C  ++   SV    +++ A+  +DL  H+ATHPR+GVVDH+S HPLG   S  + + A LA   A+G  VG      P  LYG  + G RRLA++RR+  YF    GG+    I       AD GP +VD   GI  VG TP V N+N+LL++ D  L   +++++ ++ GGLP VES+ L+   G  E ACNLL  K +    VL    E AA  G+ V   YE G
Sbjct:    1 TEKVALLNNFGGEPYHRTSFTL---CSPSIHELSVVASSIAKAAIARLDLTVHQATHPRLGVVDHISCHPLGVSAS--LGEAASLA--HAIGSCVGGGPHPAPTFLYGAADGGGRRLADLRRAFGYFDGAAGGQWSGAIRGSEALRADFGPTDVDERVGIVAVGATPWVVNFNVLLNSTDMTLGRSISKAVSQRGGGLPAVESMALRHTGGLIEVACNLLDYKISGPDAVLKRVTELAATEGVEVKQWYEIG 245          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1384.2285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA3_ECTSI3.060e-21397.44FTCD_N domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A4D9D4Y2_9STRA3.140e-6545.93FTCD_N domain-containing protein n=1 Tax=Nannochlo... [more]
A0A7S3XW83_HETAK2.670e-5944.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J9WP56_9CHLO1.720e-5642.55Probable formimidoyltransferase-cyclodeaminase n=1... [more]
I0YZZ2_COCSC4.790e-5640.27Formiminotransferase n=1 Tax=Coccomyxa subellipsoi... [more]
A8HWL3_CHLRE6.840e-4940.15Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A0A090N402_OSTTA1.460e-4337.34Formiminotransferas, N-and C-terminal subdomains n... [more]
A0A061R7T0_9CHLO2.050e-4339.16Formimidoyltransferase-cyclodeaminase-like isoform... [more]
A4S2F9_OSTLU3.750e-4337.18FTCD_N domain-containing protein n=1 Tax=Ostreococ... [more]
A0A7S1SLQ1_9CHLO2.450e-4139.68Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1384contigE-siliculosus-1a_F_contig1384:16193..20421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size942
Model size1234
Exons4
Ec32 orthologEc-27_004640.1
Ec32 ortholog descriptionFormiminotransferase, N-terminal subdomain
Hectar predicted targeting categorymitochondrion
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.E
EggNOG OGs2QS19@2759,COG3404@1
EggNOG free text desc.formimidoyltetrahydrofolate cyclodeaminase activity
GOsGO:0000139,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005790,GO:0005793,GO:0005794,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0006996,GO:0007010,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0012505,GO:0015631,GO:0016020,GO:0016043,GO:0016054,GO:0016740,GO:0016741,GO:0016742,GO:0016829,GO:0016840,GO:0016841,GO:0019439,GO:0019752,GO:0030407,GO:0030409,GO:0030412,GO:0030868,GO:0031090,GO:0031984,GO:0034641,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:0071840,GO:0071944,GO:0097425,GO:0098588,GO:0098791,GO:0098827,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606
Preferred nameFTCDNL1
Seed eggNOG ortholog2880.D8LBA3
Seed ortholog evalue4.9e-168
Seed ortholog score597.0
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1384.2285.1prot_E-siliculosus-1a_F_contig1384.2285.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1384 16288..20224 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927897.1271732-UTR-E-siliculosus-1a_F_contig1384:16192..162871622927897.1271732-UTR-E-siliculosus-1a_F_contig1384:16192..16287Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1384 16193..16287 -
1696318728.1529305-UTR-E-siliculosus-1a_F_contig1384:16192..162871696318728.1529305-UTR-E-siliculosus-1a_F_contig1384:16192..16287Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1384 16193..16287 -
1622927897.3100312-UTR-E-siliculosus-1a_F_contig1384:20224..204211622927897.3100312-UTR-E-siliculosus-1a_F_contig1384:20224..20421Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1384 20225..20421 -
1696318728.199869-UTR-E-siliculosus-1a_F_contig1384:20224..204211696318728.199869-UTR-E-siliculosus-1a_F_contig1384:20224..20421Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1384 20225..20421 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927897.1738665-CDS-E-siliculosus-1a_F_contig1384:16287..165001622927897.1738665-CDS-E-siliculosus-1a_F_contig1384:16287..16500Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1384 16288..16500 -
1696318728.1638303-CDS-E-siliculosus-1a_F_contig1384:16287..165001696318728.1638303-CDS-E-siliculosus-1a_F_contig1384:16287..16500Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1384 16288..16500 -
1622927897.2051125-CDS-E-siliculosus-1a_F_contig1384:17985..181261622927897.2051125-CDS-E-siliculosus-1a_F_contig1384:17985..18126Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1384 17986..18126 -
1696318728.1730332-CDS-E-siliculosus-1a_F_contig1384:17985..181261696318728.1730332-CDS-E-siliculosus-1a_F_contig1384:17985..18126Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1384 17986..18126 -
1622927897.240681-CDS-E-siliculosus-1a_F_contig1384:18433..185081622927897.240681-CDS-E-siliculosus-1a_F_contig1384:18433..18508Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1384 18434..18508 -
1696318728.1821053-CDS-E-siliculosus-1a_F_contig1384:18433..185081696318728.1821053-CDS-E-siliculosus-1a_F_contig1384:18433..18508Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1384 18434..18508 -
1622927897.2699418-CDS-E-siliculosus-1a_F_contig1384:19711..202241622927897.2699418-CDS-E-siliculosus-1a_F_contig1384:19711..20224Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1384 19712..20224 -
1696318728.1912694-CDS-E-siliculosus-1a_F_contig1384:19711..202241696318728.1912694-CDS-E-siliculosus-1a_F_contig1384:19711..20224Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1384 19712..20224 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1384.2285.1

>prot_E-siliculosus-1a_F_contig1384.2285.1 ID=prot_E-siliculosus-1a_F_contig1384.2285.1|Name=mRNA_E-siliculosus-1a_F_contig1384.2285.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=314bp
MLLLRLCTRQSFLRRRIGNTNMACREYGAEAPARCCAVVYVSEGRNNTLL
DALAEAAWTTATGNAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSR
RAVRAIDLLEHEATHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALG
KDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDAS
RGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQ
REDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTEEE
ALAAISRLSSERK*
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mRNA from alignment at E-siliculosus-1a_F_contig1384:16193..20421-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1384.2285.1 ID=mRNA_E-siliculosus-1a_F_contig1384.2285.1|Name=mRNA_E-siliculosus-1a_F_contig1384.2285.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4229bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1384:16193..20421- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTTTGCCACCCCGATCGTGCAGTGTACTGACGAGCTGACGCTCCCCACAG TAGTCTACAGTCAATTAACCTTTCGGATGTGAGCATCGTCTGTTGAGTTT TCTATAGCACCATCTGTAGCCCACGGCTGTCGTGTTGGCGTTTGTTGGGG AGAGCTCCGGTCTCCTTCCTGGCGCTGGCTATAAAACCCAACGATCAATG CTGCTGCTGCGTTTATGCACACGGCAGTCATTTTTGCGCCGTAGGATCGG CAACACCAACATGGCTTGCCGAGAGTACGGTGCAGAAGCCCCTGCCAGGT GCTGCGCGGTGGTGTATGTGTCAGAGGGGAGAAACAACACGCTGTTGGAT GCTCTGGCCGAGGCGGCATGGACGACTGCTACCGGTAACGCTGGCCTGAT CAGGCAGTTCAGAGATCCCCAGTACCACCGCACGGGCTTCACGATAGGCG GTGCATGTCCCGATGCCGTAGCGAGAGCTTCGGTAGAGGTTAGCCGTCGC GCCGTCCGAGCAATCGATCTTCTCGAGCACGAGGCAACCCACCCCCGAAT CGGGGTGGTTGATCACGTGTCAGTGCACCCACTGGGGGGAGAAGGCAGCC AGGAGATTGCTCAGAAGGCAGGCTTGGCCATTGCGACGGCACTGGGCAAG GATGTGGGCCTACCCGTCTTGCTGTACGGCGACCTAAACAACGGCAGACG GTTAGCGGAGGTGAGATTGAGCCAAGGGCACGCGGCGGGTAATCTCCGCT GGGAGGGCTGGAGGCTTGTAGACTACGCGCTGCAGTTTATGTAAATTTGT GCAACCTTAATGCCCAGTTGGTTGTTGTGCGTGCCGAAAGCAGAGAAATA AAACACAAACCCCGATTCTTGTCACGGAGGTCTACATAGTCAGGAGTTAG CGCCCGCACTAAAGGACCTGAGAGTTGAAAAGTTCGGGCTGAAAAAAACG AGTCTCTTTACGGTGGGGAACGTGTATGTGGCACGCCGCGGTTAGTTACC TGTTTCTTTTCTAGATGCCATGATGCGACGCTCATCAAGCAATCCATGTC CCAATTGCGGGTTAGGTGGAAAAGGCAGACGCAATAGAGAGAAGACAGAT TTCTCTAGCAATGGTACAATAAATAGAACAGATGGCCGTGTTAAAGATAA CTTGTTTGGTACATCATGGAAGTGGTGTTATTTTTTGCCCATGGGCATCC GTCGACACTGCTGTAGAGTTGATGGTCGGCATAAGACTGTGAAGTGTTTG TATGACTTTTGGGTGCTTGAGCCGTAGACCCCCTCGCGTCTCGAACCACT CTCTTTTTTCGGTCGAGGCCGTTTCTGGATGGCAGAGCTTATGCGGTGCA CGTGCTTCGTAGTATTGGAAACGTAGGACAAATCGCAGGGGGCAGTCCTG AGGCGCTGGCTCTGTGTATCTCTCTTTGCACGGTCGGGTGGCGCGAGGCC GACGATAATGTCAGTGCGTCGCACTACCTGCTGTCCACGCAAGCGCAGCG ACTATCGCGGAGAGCCTTGAAATACTACGTGAGCTTGTAGGTTTTTATAC ATATATCTACAGACCGATGGTTGAGTACTTTCGTGAGGCACGACGCCTGC GAACGGCAAACCAGACCACACCGCAGCTGCTGTTTGAAGCACTGCTGCAT CTACAGTACTCCCCTACATATTTTTCTTGGCAGAAGAAAGCACAGTGATG TCAGACAAGCAGAAAGAGCGCCAAGTTCTAGTAGCATAATGGGGGCAGCC ACGATCGACCGCGTTGTTGTCATGATGCATCCCGTCGAGGGTCGAAAGAT GCCGAATTCAGTTTAGTCTTGGAGCACAGCATCCTGTGAATTAACTCCAC AAGGTAGATATACAGCAGGTACCATCAATAATGCTGCTGTTCTGCCTATG TTGTCGTTGGCAGGTGCGGAGATCAACACCCTACTTTGTTGGCGGAGAGC TCCCCGCGACGATCGATGCAGACCTTGGGCCAAACGAGGTGGGCGTGTGT GTTGTAAGAGCATCCTATAGTTGTGCCTTTCGACATCCATCCGTGTAGTT CGATCAGCTACTACAATAGAGAACGAGTCACCGGACACGTTTGTAGTGAA CACGATGTGGGTATAAGATCTACGGCATCACCCTCACGATTCTAATTCCT ATTATAGTGGGGATAACCCACACACCCCAGACTTGTCGTACTCTGAGCGT GAGTTGATACAGGAACCGACTGCTCCTACTTGCCGCCGACCCGCGTTCCA CGAAAACGCTACCACGAGCCTCGCTTCTGCCATCGCTGTCCGCAGGTAGA TGCGTCTCGAGGTATTGCCACCGTCGGCTGCACCCCGCTGGTGACAAACT ACAACATCCTCCTGAGCACCGATGACAAGCGCCTGGCTTCGAAAGTGACT CGAAGCCTGCGAGAGAAAGATGGCGGATTGCCGTGGGTAAGCTCACTCAC TGCCCCCCTCTCTTCTCTTGTTTGGTCTCACGATTGCTCATTTTGTACTC CCAGGAGGGAACATCGATATTCTATCGAAAACAACCATGGACAAAAAATT ACCGTAACTAGAAGCATTCATAGAGAAGAACAGATTTGCAGGCTGTTTCG TTCGATTAAAAAATCCGCTTCGTGGATTTCCTCACATGGCGAACGCCACC TCTGCGGACCAGGTCGTTTTTAGCGTTTTTTCGTCAAGAAACGGAAGGGA AGTAGATATCAATCGCAGTTTGTAGCCACTGCAGTTTATTTCTTCTTGCG GTTAGTCTACATCCCGTAAATATATTGGCAAAACCGTGGCCTTGATGACG GTGCAAGACTCATCCAGACCACACAGATGCCCGCACTTTGTAACGGTTCT CAGGCGGCCTTGTTGTTAACGTGTAACGTTGGTACATCCAAGATGAAATA TTTCGTCAGATACACTGTGTGTGCCGTTTGCACCATCCGCGGCCTCGCGG CCAGACACATCCAAACGTTATACCTAACAAGCGTTGCTTCATCACCATGA CGTAAACATTCGCGTGGTGCAATTCGCACTATTCCTTTCACAGATAATAT GTCTCCTCCCATGCAATAGTACAGTTTATACTCTGGACTTGATCTTGACT CTACTGCTAGACCGTGCCAATTGTTACAACTTATCACGAACCAACTGCTC TCCCGCACCAGTAGACTTGGGCGTGTGCGTGTGCGTGTGCGTGTGCGTTT GCGTGCATACGGGGCAAGGTGTGTGTGTGGGCGCGTTGTACGTACGGTTG GCCACACAACCGCGCACAAAACCGTACCCAGCACGCCAAAATATCGTGAT TTGTTGTGGGTCTGGCAGCATGAGTCGTTTCGTTCAGCAACCATTTGTTG TAATCGATTTTGATCAACCTCACGCAGCGGGACGTTTTCCATTGGCATAT TTTCGCGGAACGGAGCAATCAATATGGTCGAGGGAGAAATCTTTACGAGG CAAAATGTTCTGTCGAAAGTCGCCTCGCCTGTCGAAAATGTTTTCCCGTA AATTACGAGCTGATAGTCTATGTATGTGCTGTTATGCACTATCACTTGGG TTTCCCAAACGCGCTTGGTTGGGGTTCCTACGCCCGAAGGTGTACATCGC ACTTCAACACATCCTTTGACTTGGAGTGAAAGCGATCTCCGCCATGGAGG AAGCCCTTTACGTGGAGCATTGGTTCAGGCCGATATGTTACCATTTCCCG CAACGTTACGCCCCCTGCTTCGGGATGGTACAACTTTGCACGCAAAGCGC GAAGAAACCGCATCCATCGTGAACTGTGAGCTGATGCTATGATACGTAAC CGAAGCGACGAACCCAGTCACTATTTCAGCAAGGCCGTGCATGAGGTACA CATCAACGACCATTTCCCAACAATTTCATCAACCTAAGCCGCCCAGGGCA ATCGAACCCTCTTTCTTGCAGGTGGAATCACTAACCCTTCAGAGAGAAGA CGGTACGTTCGAGGCCGCCTGCAACCTGCTTCGGCCGAAAGAAACAACGA CGGCCAACGTGTTAGCTGTGGCTGAAGAACAAGCGGCCGGTGTTGGCATC CGAGTTGTGGATCACTACGAGACGGGACTTACGGAAGAGGAAGCCTTGGC GGCAATATCTCGACTTTCGTCAGAGAGAAAGTAAAATGTGTGGTATTTTA CTTTATGTCGGAGGAGAGGGTTTAAGGCGGAGGAAAGCAGAAACGAAAGT ATATTAAGTGTTAACTGTTGTAGATCCCA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1384:16193..20421-

>mRNA_E-siliculosus-1a_F_contig1384.2285.1 ID=mRNA_E-siliculosus-1a_F_contig1384.2285.1|Name=mRNA_E-siliculosus-1a_F_contig1384.2285.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1884bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1384:16193..20421- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTGCTGCTGCGTTTATGCACACGGCAGTCATTTTTGCGCCGTAGGAT
CGGCAACACCAACATGGCTTGCCGAGAGTACGGTGCAGAAGCCCCTGCCA
GGTGCTGCGCGGTGGTGTATGTGTCAGAGGGGAGAAACAACACGCTGTTG
GATGCTCTGGCCGAGGCGGCATGGACGACTGCTACCGGTAACGCTGGCCT
GATCAGGCAGTTCAGAGATCCCCAGTACCACCGCACGGGCTTCACGATAG
GCGGTGCATGTCCCGATGCCGTAGCGAGAGCTTCGGTAGAGGTTAGCCGT
CGCGCCGTCCGAGCAATCGATCTTCTCGAGCACGAGGCAACCCACCCCCG
AATCGGGGTGGTTGATCACGTGTCAGTGCACCCACTGGGGGGAGAAGGCA
GCCAGGAGATTGCTCAGAAGGCAGGCTTGGCCATTGCGACGGCACTGGGC
AAGGATGTGGGCCTACCCGTCTTGCTGTACGGCGACCTAAACAACGGCAG
ACGGTTAGCGGAGATGCTGCTGCTGCGTTTATGCACACGGCAGTCATTTT
TGCGCCGTAGGATCGGCAACACCAACATGGCTTGCCGAGAGTACGGTGCA
GAAGCCCCTGCCAGGTGCTGCGCGGTGGTGTATGTGTCAGAGGGGAGAAA
CAACACGCTGTTGGATGCTCTGGCCGAGGCGGCATGGACGACTGCTACCG
GTAACGCTGGCCTGATCAGGCAGTTCAGAGATCCCCAGTACCACCGCACG
GGCTTCACGATAGGCGGTGCATGTCCCGATGCCGTAGCGAGAGCTTCGGT
AGAGGTTAGCCGTCGCGCCGTCCGAGCAATCGATCTTCTCGAGCACGAGG
CAACCCACCCCCGAATCGGGGTGGTTGATCACGTGTCAGTGCACCCACTG
GGGGGAGAAGGCAGCCAGGAGATTGCTCAGAAGGCAGGCTTGGCCATTGC
GACGGCACTGGGCAAGGATGTGGGCCTACCCGTCTTGCTGTACGGCGACC
TAAACAACGGCAGACGGTTAGCGGAGGTGCGGAGATCAACACCCTACTTT
GTTGGCGGAGAGCTCCCCGCGACGATCGATGCAGACCTTGGGCCAAACGA
GGTGCGGAGATCAACACCCTACTTTGTTGGCGGAGAGCTCCCCGCGACGA
TCGATGCAGACCTTGGGCCAAACGAGGTAGATGCGTCTCGAGGTATTGCC
ACCGTCGGCTGCACCCCGCTGGTGACAAACTACAACATCCTCCTGAGCAC
CGATGACAAGCGCCTGGCTTCGAAAGTGACTCGAAGCCTGCGAGAGAAAG
ATGGCGGATTGCCGTGGGTAGATGCGTCTCGAGGTATTGCCACCGTCGGC
TGCACCCCGCTGGTGACAAACTACAACATCCTCCTGAGCACCGATGACAA
GCGCCTGGCTTCGAAAGTGACTCGAAGCCTGCGAGAGAAAGATGGCGGAT
TGCCGTGGGTGGAATCACTAACCCTTCAGAGAGAAGACGGTACGTTCGAG
GCCGCCTGCAACCTGCTTCGGCCGAAAGAAACAACGACGGCCAACGTGTT
AGCTGTGGCTGAAGAACAAGCGGCCGGTGTTGGCATCCGAGTTGTGGATC
ACTACGAGACGGGACTTACGGAAGAGGAAGCCTTGGCGGCAATATCTCGA
CTTTCGTCAGAGAGAAAGTAAGTGGAATCACTAACCCTTCAGAGAGAAGA
CGGTACGTTCGAGGCCGCCTGCAACCTGCTTCGGCCGAAAGAAACAACGA
CGGCCAACGTGTTAGCTGTGGCTGAAGAACAAGCGGCCGGTGTTGGCATC
CGAGTTGTGGATCACTACGAGACGGGACTTACGGAAGAGGAAGCCTTGGC
GGCAATATCTCGACTTTCGTCAGAGAGAAAGTAA
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