mRNA_E-siliculosus-1a_F_contig13832.2282.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig13832.2282.1
Unique NamemRNA_E-siliculosus-1a_F_contig13832.2282.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: A0A1L2F1Q1_9PHAE (Cytochrome b6-f complex subunit 4 n=58 Tax=Stramenopiles TaxID=33634 RepID=A0A1L2F1Q1_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 1.400e-113
Identity = 155/160 (96.88%), Postives = 160/160 (100.00%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFV+VIGLAVMEPSA+GEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMA+VPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTF+AIWLGIGACLPINKA+TLGLF
Sbjct:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVIVIGLAVMEPSAIGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMASVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFIAIWLGIGACLPINKALTLGLF 160
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: B2XTC2_HETAK (Cytochrome b6-f complex subunit 4 n=4 Tax=Ochrophyta TaxID=2696291 RepID=B2XTC2_HETAK)

HSP 1 Score: 303 bits (775), Expect = 8.080e-104
Identity = 140/160 (87.50%), Postives = 152/160 (95.00%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MS++KKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGTF +V GLAV+EPSALGE ANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVL+MAAVP GLITVPFIEN+NKFQNPFRRP+ASTVFL GT VAIWLGIGACLPIN+A+TLGLF
Sbjct:    1 MSVIKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTFSIVTGLAVLEPSALGEPANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLSMAAVPLGLITVPFIENINKFQNPFRRPIASTVFLFGTVVAIWLGIGACLPINQAVTLGLF 160
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: A0A7U0KT28_OLILU (Cytochrome b6-f complex subunit 4 n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0KT28_OLILU)

HSP 1 Score: 301 bits (772), Expect = 2.320e-103
Identity = 138/160 (86.25%), Postives = 155/160 (96.88%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MSI+KKPDL+DPKLRAKLAKGMGHNYYGEPAWPND+ Y+FP+CILGTF ++IGLA++EPSALGEKA+PFATPLEILPEWYFFPTFN+LRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRP+AS VFL+GT +AIWLGIGA +PI+KA+TLGLF
Sbjct:    1 MSIIKKPDLSDPKLRAKLAKGMGHNYYGEPAWPNDLLYIFPVCILGTFSILIGLAILEPSALGEKADPFATPLEILPEWYFFPTFNILRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPIASIVFLLGTVIAIWLGIGATMPIDKALTLGLF 160
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: A0A516ZA44_9STRA (Cytochrome b6-f complex subunit 4 n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZA44_9STRA)

HSP 1 Score: 296 bits (757), Expect = 4.490e-101
Identity = 137/160 (85.62%), Postives = 149/160 (93.12%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MS++KKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGTF ++IGLAV+EPSALGEKA+PFATPLEILPEWYFFPTFNLLRVLPNKLLGV+AMAAVPAGLITVPFIENVNKFQNPFRRP+A  VFL GT  AIW GIGACLPI  A+TLGLF
Sbjct:    1 MSVIKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTFAILIGLAVLEPSALGEKADPFATPLEILPEWYFFPTFNLLRVLPNKLLGVIAMAAVPAGLITVPFIENVNKFQNPFRRPLAMAVFLFGTAFAIWFGIGACLPIKDAVTLGLF 160
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: A0A1X9PVG8_9RHOD (Cytochrome b6-f complex subunit 4 n=1 Tax=Bulboplastis apyrenoidosa TaxID=1070855 RepID=A0A1X9PVG8_9RHOD)

HSP 1 Score: 295 bits (755), Expect = 9.050e-101
Identity = 136/160 (85.00%), Postives = 148/160 (92.50%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MS+LKKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ YMFP+CILGT    +GLAVMEPSALGE +NPFATPLEILPEWYFFPTFNLLRV+PNKLLGVL+MAAVPAGLITVPF+ENVNKFQNPFRRP+A  V+L GT  +IWLGIGA LPINKA+TLGLF
Sbjct:    1 MSVLKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYMFPVCILGTIACCVGLAVMEPSALGEPSNPFATPLEILPEWYFFPTFNLLRVIPNKLLGVLSMAAVPAGLITVPFLENVNKFQNPFRRPLAMAVYLTGTVTSIWLGIGATLPINKALTLGLF 160
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: A0A0D3M5D2_9STRA (Cytochrome b6-f complex subunit 4 n=17 Tax=Eustigmatophyceae TaxID=5747 RepID=A0A0D3M5D2_9STRA)

HSP 1 Score: 293 bits (749), Expect = 7.440e-100
Identity = 133/160 (83.12%), Postives = 150/160 (93.75%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MS++KKPDLT+P LRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGTF LVIGL+ +EPSA+GEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGV+AMAAVPAGL+TVPFIEN+N FQNPFRRP+AS +FLIGT  AIW GIGAC+PI+KA+TLGLF
Sbjct:    1 MSVIKKPDLTNPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTFALVIGLSTLEPSAIGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVIAMAAVPAGLLTVPFIENINTFQNPFRRPIASFMFLIGTVFAIWFGIGACMPISKAVTLGLF 160
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: PETD_PORPU (Cytochrome b6-f complex subunit 4 n=14 Tax=Bangiaceae TaxID=31345 RepID=PETD_PORPU)

HSP 1 Score: 292 bits (748), Expect = 1.060e-99
Identity = 134/160 (83.75%), Postives = 149/160 (93.12%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGT    IGLA++EPS+LGEK+NPFATPLEILPEWYFFPTFNLLRV+PNKLLGVL+MAAVPAGL+TVPFIENVNKFQNPFRRP+A+T+FLI T + IWLGIGA +PIN AITLGLF
Sbjct:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYVFPVVILGTIACSIGLAILEPSSLGEKSNPFATPLEILPEWYFFPTFNLLRVIPNKLLGVLSMAAVPAGLLTVPFIENVNKFQNPFRRPIATTIFLISTVITIWLGIGATMPINNAITLGLF 160
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: M1K3S0_DIALT (Cytochrome b6-f complex subunit 4 n=2 Tax=Pavlovaceae TaxID=418969 RepID=M1K3S0_DIALT)

HSP 1 Score: 291 bits (745), Expect = 3.030e-99
Identity = 132/160 (82.50%), Postives = 151/160 (94.38%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MSILKKPDLTD KLRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGT   ++GL+V+EPS+LGEKA+PFATPLEILPEWYFFPTFNLLRV+PNKLLGVL+MAAVPAGLITVPF+ENVNKFQNPFRRP+AS  F++GTF+AIWLGIGA +PIN+A+TLGLF
Sbjct:    1 MSILKKPDLTDAKLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACIVGLSVLEPSSLGEKADPFATPLEILPEWYFFPTFNLLRVIPNKLLGVLSMAAVPAGLITVPFLENVNKFQNPFRRPIASLTFVLGTFIAIWLGIGATMPINQALTLGLF 160
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: A0A1C9CCJ2_9RHOD (Cytochrome b6-f complex subunit 4 n=7 Tax=Rhodophyta TaxID=2763 RepID=A0A1C9CCJ2_9RHOD)

HSP 1 Score: 289 bits (739), Expect = 2.490e-98
Identity = 135/160 (84.38%), Postives = 148/160 (92.50%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MS+LKKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ Y FPI ILGT   +IGLA++EPSALGEK++PFATPLEILPEWY FPTFNLLRV+PNKL+GVL+MAAVPAGLI VPFIENVNKFQNPFRRPVASTVFL+GT  AIWLGIGA  PI++AITLGLF
Sbjct:    1 MSVLKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYTFPIVILGTIACLIGLAILEPSALGEKSDPFATPLEILPEWYLFPTFNLLRVIPNKLIGVLSMAAVPAGLIAVPFIENVNKFQNPFRRPVASTVFLVGTVAAIWLGIGATKPISEAITLGLF 160
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Match: A0A1C9C7T5_RHOPU (Cytochrome b6-f complex subunit 4 n=54 Tax=Florideophyceae TaxID=2806 RepID=A0A1C9C7T5_RHOPU)

HSP 1 Score: 288 bits (736), Expect = 7.140e-98
Identity = 129/160 (80.62%), Postives = 151/160 (94.38%), Query Frame = 1 
Query:    1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLPINKAITLGLF 480
            MSI+KKPDLTDPKLRAKLAKGMGH+YYGEPAWPND+ YMFP+ ILGT    +GL+++EPS +GE ANPFATPLEILPEWYFFPTFNLLRV+PNKL+GVL+MA+VPAGLITVPFIE++NKFQNPFRRP+A+TVFLIGTF++IWLGIGA +P++KAITLGLF
Sbjct:    1 MSIIKKPDLTDPKLRAKLAKGMGHHYYGEPAWPNDLLYMFPVVILGTIACDVGLSILEPSVIGEIANPFATPLEILPEWYFFPTFNLLRVIPNKLIGVLSMASVPAGLITVPFIESINKFQNPFRRPIATTVFLIGTFISIWLGIGATMPLSKAITLGLF 160
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13832.2282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1L2F1Q1_9PHAE1.400e-11396.88Cytochrome b6-f complex subunit 4 n=58 Tax=Stramen... [more]
B2XTC2_HETAK8.080e-10487.50Cytochrome b6-f complex subunit 4 n=4 Tax=Ochrophy... [more]
A0A7U0KT28_OLILU2.320e-10386.25Cytochrome b6-f complex subunit 4 n=1 Tax=Olisthod... [more]
A0A516ZA44_9STRA4.490e-10185.63Cytochrome b6-f complex subunit 4 n=2 Tax=Dictyoch... [more]
A0A1X9PVG8_9RHOD9.050e-10185.00Cytochrome b6-f complex subunit 4 n=1 Tax=Bulbopla... [more]
A0A0D3M5D2_9STRA7.440e-10083.13Cytochrome b6-f complex subunit 4 n=17 Tax=Eustigm... [more]
PETD_PORPU1.060e-9983.75Cytochrome b6-f complex subunit 4 n=14 Tax=Bangiac... [more]
M1K3S0_DIALT3.030e-9982.50Cytochrome b6-f complex subunit 4 n=2 Tax=Pavlovac... [more]
A0A1C9CCJ2_9RHOD2.490e-9884.38Cytochrome b6-f complex subunit 4 n=7 Tax=Rhodophy... [more]
A0A1C9C7T5_RHOPU7.140e-9880.63Cytochrome b6-f complex subunit 4 n=54 Tax=Floride... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13832contigE-siliculosus-1a_F_contig13832:729..1211 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size483
Model size483
Exons1
Hectar predicted targeting categorysignal anchor
BRITEko00000,ko00001,ko00002,ko00194,ko03029
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.C
EggNOG OGsCOG1290@1,KOG4663@2759
EggNOG free text desc.electron transfer activity
GOsGO:0000003,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005750,GO:0006091,GO:0006119,GO:0006122,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0007275,GO:0007276,GO:0007283,GO:0007584,GO:0008121,GO:0008150,GO:0008152,GO:0009055,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009408,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009605,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0014070,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016679,GO:0016681,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0019953,GO:0020037,GO:0022414,GO:0022900,GO:0022904,GO:0031090,GO:0031099,GO:0031100,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031667,GO:0031966,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032592,GO:0032991,GO:0033273,GO:0033590,GO:0033762,GO:0034220,GO:0034357,GO:0034641,GO:0036293,GO:0036296,GO:0042221,GO:0042493,GO:0042538,GO:0042651,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044703,GO:0044877,GO:0045275,GO:0045333,GO:0045471,GO:0046034,GO:0046483,GO:0046677,GO:0046686,GO:0046688,GO:0046689,GO:0046906,GO:0048037,GO:0048038,GO:0048039,GO:0048232,GO:0048513,GO:0048609,GO:0048731,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051592,GO:0051704,GO:0055035,GO:0055085,GO:0055086,GO:0055093,GO:0055114,GO:0070069,GO:0070469,GO:0070482,GO:0071704,GO:0072521,GO:0097159,GO:0097305,GO:0098573,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1901652,GO:1901698,GO:1901700,GO:1902494,GO:1902600,GO:1990204
KEGG ModuleM00151,M00152,M00162
KEGG Pathwayko00190,ko00195,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map00195,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016
KEGG koko:K00412,ko:K02637
Preferred nameCYTB
Seed eggNOG ortholog2880.D1J799
Seed ortholog evalue2.9e-87
Seed ortholog score327.8
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927896.6458356-CDS-E-siliculosus-1a_F_contig13832:728..12111622927896.6458356-CDS-E-siliculosus-1a_F_contig13832:728..1211Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13832 729..1211 -
1696318728.0177886-CDS-E-siliculosus-1a_F_contig13832:728..12111696318728.0177886-CDS-E-siliculosus-1a_F_contig13832:728..1211Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13832 729..1211 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13832.2282.1prot_E-siliculosus-1a_F_contig13832.2282.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig13832 729..1211 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig13832.2282.1

>prot_E-siliculosus-1a_F_contig13832.2282.1 ID=prot_E-siliculosus-1a_F_contig13832.2282.1|Name=mRNA_E-siliculosus-1a_F_contig13832.2282.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=161bp
MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVL
VIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLA
MAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFVAIWLGIGACLP
INKAITLGLF*
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mRNA from alignment at E-siliculosus-1a_F_contig13832:729..1211-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig13832.2282.1 ID=mRNA_E-siliculosus-1a_F_contig13832.2282.1|Name=mRNA_E-siliculosus-1a_F_contig13832.2282.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=483bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13832:729..1211- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCTATCTTAAAAAAACCAGATCTAACAGATCCAAAATTACGTGCTAA
ATTAGCAAAAGGAATGGGTCATAATTACTATGGTGAACCTGCTTGGCCAA
ATGATATCTTTTATATGTTCCCTATTTGTATTTTAGGGACGTTTGTATTA
GTAATTGGACTTGCTGTAATGGAGCCTTCAGCTTTAGGTGAAAAGGCTAA
CCCATTTGCAACTCCTTTAGAGATTTTACCTGAATGGTATTTTTTCCCAA
CTTTTAATTTACTAAGGGTATTACCAAATAAATTATTAGGTGTTTTAGCA
ATGGCTGCTGTACCAGCAGGATTAATCACAGTACCATTTATAGAAAATGT
TAATAAATTCCAAAACCCTTTTAGAAGACCGGTCGCTTCAACTGTTTTTT
TAATTGGTACATTTGTTGCAATATGGTTAGGGATTGGGGCGTGTTTACCA
ATCAACAAAGCAATAACTTTAGGATTATTTTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13832:729..1211-

>mRNA_E-siliculosus-1a_F_contig13832.2282.1 ID=mRNA_E-siliculosus-1a_F_contig13832.2282.1|Name=mRNA_E-siliculosus-1a_F_contig13832.2282.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=966bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13832:729..1211- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCTATCTTAAAAAAACCAGATCTAACAGATCCAAAATTACGTGCTAA
ATTAGCAAAAGGAATGGGTCATAATTACTATGGTGAACCTGCTTGGCCAA
ATGATATCTTTTATATGTTCCCTATTTGTATTTTAGGGACGTTTGTATTA
GTAATTGGACTTGCTGTAATGGAGCCTTCAGCTTTAGGTGAAAAGGCTAA
CCCATTTGCAACTCCTTTAGAGATTTTACCTGAATGGTATTTTTTCCCAA
CTTTTAATTTACTAAGGGTATTACCAAATAAATTATTAGGTGTTTTAGCA
ATGGCTGCTGTACCAGCAGGATTAATCACAGTACCATTTATAGAAAATGT
TAATAAATTCCAAAACCCTTTTAGAAGACCGGTCGCTTCAACTGTTTTTT
TAATTGGTACATTTGTTGCAATATGGTTAGGGATTGGGGCGTGTTTACCA
ATCAACAAAGCAATAACTTTAGGATTATTTTAAATGTCTATCTTAAAAAA
ACCAGATCTAACAGATCCAAAATTACGTGCTAAATTAGCAAAAGGAATGG
GTCATAATTACTATGGTGAACCTGCTTGGCCAAATGATATCTTTTATATG
TTCCCTATTTGTATTTTAGGGACGTTTGTATTAGTAATTGGACTTGCTGT
AATGGAGCCTTCAGCTTTAGGTGAAAAGGCTAACCCATTTGCAACTCCTT
TAGAGATTTTACCTGAATGGTATTTTTTCCCAACTTTTAATTTACTAAGG
GTATTACCAAATAAATTATTAGGTGTTTTAGCAATGGCTGCTGTACCAGC
AGGATTAATCACAGTACCATTTATAGAAAATGTTAATAAATTCCAAAACC
CTTTTAGAAGACCGGTCGCTTCAACTGTTTTTTTAATTGGTACATTTGTT
GCAATATGGTTAGGGATTGGGGCGTGTTTACCAATCAACAAAGCAATAAC
TTTAGGATTATTTTAA
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