mRNA_E-siliculosus-1a_F_contig13832.2281.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig13832.2281.1
Unique NamemRNA_E-siliculosus-1a_F_contig13832.2281.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: D1J7A0_ECTSI (Mg-protoporphyrin IX chelatase n=40 Tax=Phaeophyceae TaxID=2870 RepID=D1J7A0_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 1.610e-143
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEII 621
            GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEII
Sbjct:  134 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEII 340
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: A0A1I9LVR8_9PHAE (Mg-protoporphyrin IX chelatase n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVR8_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 1.030e-132
Identity = 192/207 (92.75%), Postives = 197/207 (95.17%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEII 621
            GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDP LRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKII AQNLLDK++MPYDFRLKIS+VCS+LDVDGLRGDIVTNRAAKAY AFQGK  I I+DIEKIIVLCLRHRLRKDPLE IDSGYKVK  FEE FEII
Sbjct:  134 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPCLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIIEAQNLLDKIDMPYDFRLKISQVCSDLDVDGLRGDIVTNRAAKAYAAFQGKQIINIQDIEKIIVLCLRHRLRKDPLELIDSGYKVKNAFEENFEII 340
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: A0A0Y0JJ88_9PHAE (Mg-protoporphyrin IX chelatase n=17 Tax=Fucales TaxID=3009 RepID=A0A0Y0JJ88_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 4.580e-129
Identity = 184/207 (88.89%), Postives = 199/207 (96.14%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEII 621
            GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEI+TVKDPDLRVKIVEERTLFDLDPYAWV+KYKDQQE LK+KII+AQNLL+ VE+ Y+FR+KISKVCSEL+VDGLRGDIVTNRAAKAY A+QGK  + IEDI+KII+LCLRHRLRKDPLESIDSGYKVKK FE+IFEI+
Sbjct:  134 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIKTVKDPDLRVKIVEERTLFDLDPYAWVNKYKDQQELLKQKIINAQNLLNTVELSYEFRIKISKVCSELNVDGLRGDIVTNRAAKAYAAYQGKKIVEIEDIQKIIILCLRHRLRKDPLESIDSGYKVKKKFEDIFEIV 340
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: A0A7U3NQN5_9STRA (Mg-protoporphyrin IX chelatase n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3NQN5_9STRA)

HSP 1 Score: 365 bits (937), Expect = 7.670e-125
Identity = 178/207 (85.99%), Postives = 194/207 (93.72%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEII 621
            GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPA+FVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFD DPYAW  KYK++Q+ LK++II+AQNLL ++ + YD R+KISKVCSELDVDGLRGDIVTNRAAKAYTAF G+  +T  DIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIF+++
Sbjct:  142 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPARFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDQDPYAWASKYKEKQQELKQRIITAQNLLGEINLSYDLRVKISKVCSELDVDGLRGDIVTNRAAKAYTAFYGRKEVTSNDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFDMV 348
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: A0A2I4Q243_9PHAE (Mg-protoporphyrin IX chelatase n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q243_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 5.540e-123
Identity = 174/206 (84.47%), Postives = 193/206 (93.69%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEI 618
            GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDP+LRV+IVEERTLFD DP AW++KYK QQE LK+K+I AQ LL+ V++ YDFR+KI+KVCSEL+VDGLRGDIV NRAAKAY AFQG  +++I DIEKI+VLCLRHRLRKDPLESIDSGYKVKK+FEEIF++
Sbjct:  134 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPNLRVRIVEERTLFDFDPKAWIEKYKQQQEGLKEKLIKAQQLLNNVDISYDFRIKIAKVCSELNVDGLRGDIVINRAAKAYAAFQGNTTVSIADIEKIVVLCLRHRLRKDPLESIDSGYKVKKIFEEIFDL 339
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: A0A8E6D6H5_9PHAE (Magnesium chelatase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6H5_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 6.410e-121
Identity = 170/205 (82.93%), Postives = 191/205 (93.17%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFE 615
            GILYVDEVNLLDDHLVD+LLDSAASGWNTVEREGISI+HP+QFVLVGSGNPEEGELRPQLLDRFG+HAEI+TVKDPDLRVKIVEERTLFDLDPY W+ KYK QQE+LK+KII+AQ LL KV +PY FR+KISKVCSEL VDGLRGDIV NRAAKAY +FQGK  +T+EDIEK+IVLC+ HRLRKDPLES+DSGYKV+K F++IF+
Sbjct:  140 GILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISIKHPSQFVLVGSGNPEEGELRPQLLDRFGLHAEIKTVKDPDLRVKIVEERTLFDLDPYTWIGKYKKQQESLKQKIINAQKLLYKVRIPYHFRVKISKVCSELRVDGLRGDIVINRAAKAYASFQGKTEVTLEDIEKVIVLCISHRLRKDPLESVDSGYKVRKTFKKIFQ 344
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: C6KIQ3_AURAN (Mg-protoporphyrin IX chelatase n=3 Tax=Pelagomonadales TaxID=54409 RepID=C6KIQ3_AURAN)

HSP 1 Score: 342 bits (876), Expect = 1.580e-115
Identity = 165/206 (80.10%), Postives = 186/206 (90.29%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEI 618
            GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGIS+RHPA+FVLVGSGNPEEGELRPQLLDRFGMHAEIRTVK+PDLRV+IVEERT FD +P  WVDKY+ +Q+ L+ ++++AQNLL  VEM YDFRLKIS++CSELDVDGLRGDIV NRAAKAY AF  +  +T++DI  IIVLCLRHRLRKDPLESIDSG KV+K+F EIFEI
Sbjct:  146 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISVRHPARFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKNPDLRVRIVEERTSFDQEPQIWVDKYQAEQDELRDQLVNAQNLLPTVEMEYDFRLKISQICSELDVDGLRGDIVVNRAAKAYAAFDNRSVVTVDDISNIIVLCLRHRLRKDPLESIDSGAKVRKIFNEIFEI 351
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: A0A516Z9Y2_9STRA (Mg-protoporphyrin IX chelatase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A516Z9Y2_9STRA)

HSP 1 Score: 340 bits (871), Expect = 8.200e-115
Identity = 168/206 (81.55%), Postives = 186/206 (90.29%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEI 618
            GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPA+FVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDP LRVKIVEERT FDL+P  W+DKY  +Q AL  KIISAQN+L  V++ Y+ R+KIS+VCS LDVDGLRGDIVTNRA+KAY A  G+D +T+EDIEK+I LCLRHRLRKDPLE+IDSG KV++VFEEIFEI
Sbjct:  141 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPARFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPILRVKIVEERTSFDLNPDVWLDKYATEQTALTDKIISAQNILSDVKLDYNLRVKISEVCSILDVDGLRGDIVTNRASKAYAALNGRDEVTVEDIEKVITLCLRHRLRKDPLETIDSGDKVQQVFEEIFEI 346
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BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: C6KIZ2_9STRA (Mg-protoporphyrin IX chelatase n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=C6KIZ2_9STRA)

HSP 1 Score: 338 bits (868), Expect = 2.420e-114
Identity = 162/206 (78.64%), Postives = 185/206 (89.81%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEI 618
            GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGIS+RHPA+FVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDP+LRVKIVEERT FD +P  W+DKY+++QEAL+ K+++AQ LL  +E+ YDFR+KIS++CSELDVDGLRGDIV NRAAKA+ A   K  + ++DI  IIVLCLRHRLRKDPLESIDSG KV+KVF +IFEI
Sbjct:  144 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISVRHPARFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPELRVKIVEERTAFDQNPQIWIDKYQEEQEALRSKLVTAQQLLPSIEIDYDFRVKISQICSELDVDGLRGDIVVNRAAKAFAALNNKTKVDLDDISNIIVLCLRHRLRKDPLESIDSGAKVRKVFNDIFEI 349
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Match: A0A2U9NQ89_9STRA (Mg-protoporphyrin IX chelatase n=1 Tax=Actinocyclus subtilis TaxID=1630683 RepID=A0A2U9NQ89_9STRA)

HSP 1 Score: 337 bits (865), Expect = 7.890e-114
Identity = 164/206 (79.61%), Postives = 185/206 (89.81%), Query Frame = 1 
Query:    1 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKYKDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTNRAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVFEEIFEI 618
            GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPA+FVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDP LRVK+VEERT FD  P  W++ Y+ QQ+ L+ KI++AQNLL  VE+ YD R+KIS+VCS+LDVDGLRGDIVTNRAAKAY A+  + ++TI+DIEK+I LCLRHRLRKDPLESIDSG KV K+F+EIFEI
Sbjct:  146 GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPARFVLVGSGNPEEGELRPQLLDRFGMHAEIRTVKDPKLRVKVVEERTSFDKAPDVWIENYEQQQQQLRDKIVAAQNLLPNVELNYDLRIKISEVCSQLDVDGLRGDIVTNRAAKAYAAYNERTNVTIKDIEKVITLCLRHRLRKDPLESIDSGDKVSKIFKEIFEI 351
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13832.2281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J7A0_ECTSI1.610e-143100.00Mg-protoporphyrin IX chelatase n=40 Tax=Phaeophyce... [more]
A0A1I9LVR8_9PHAE1.030e-13292.75Mg-protoporphyrin IX chelatase n=1 Tax=Pleurocladi... [more]
A0A0Y0JJ88_9PHAE4.580e-12988.89Mg-protoporphyrin IX chelatase n=17 Tax=Fucales Ta... [more]
A0A7U3NQN5_9STRA7.670e-12585.99Mg-protoporphyrin IX chelatase n=1 Tax=Schizocladi... [more]
A0A2I4Q243_9PHAE5.540e-12384.47Mg-protoporphyrin IX chelatase n=1 Tax=Dictyopteri... [more]
A0A8E6D6H5_9PHAE6.410e-12182.93Magnesium chelatase n=1 Tax=Ishige okamurae TaxID=... [more]
C6KIQ3_AURAN1.580e-11580.10Mg-protoporphyrin IX chelatase n=3 Tax=Pelagomonad... [more]
A0A516Z9Y2_9STRA8.200e-11581.55Mg-protoporphyrin IX chelatase n=1 Tax=Florenciell... [more]
C6KIZ2_9STRA2.420e-11478.64Mg-protoporphyrin IX chelatase n=2 Tax=Aureoumbra ... [more]
A0A2U9NQ89_9STRA7.890e-11479.61Mg-protoporphyrin IX chelatase n=1 Tax=Actinocyclu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13832contigE-siliculosus-1a_F_contig13832:1..624 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size624
Model size624
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.H
EC6.6.1.1
EggNOG OGs2QRUY@2759,COG1239@1
EggNOG free text desc.ligase activity, forming nitrogen-metal bonds, forming coordination complexes
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0010007,GO:0010033,GO:0015994,GO:0015995,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016851,GO:0016874,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0030312,GO:0032991,GO:0033013,GO:0033014,GO:0034641,GO:0042221,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0050896,GO:0051002,GO:0051003,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
KEGG ReactionR03877
KEGG koko:K03405
KEGG rclassRC01012
Preferred namechlI
Seed eggNOG ortholog2880.D1J7A0
Seed ortholog evalue6.7e-113
Seed ortholog score413.3
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927896.6004868-CDS-E-siliculosus-1a_F_contig13832:0..6241622927896.6004868-CDS-E-siliculosus-1a_F_contig13832:0..624Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13832 1..624 +
1696318728.0022228-CDS-E-siliculosus-1a_F_contig13832:0..6241696318728.0022228-CDS-E-siliculosus-1a_F_contig13832:0..624Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13832 1..624 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13832.2281.1prot_E-siliculosus-1a_F_contig13832.2281.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig13832 1..624 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig13832.2281.1

>prot_E-siliculosus-1a_F_contig13832.2281.1 ID=prot_E-siliculosus-1a_F_contig13832.2281.1|Name=mRNA_E-siliculosus-1a_F_contig13832.2281.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=208bp
GILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGN
PEEGELRPQLLDRFGMHAEIRTVKDPDLRVKIVEERTLFDLDPYAWVDKY
KDQQEALKKKIISAQNLLDKVEMPYDFRLKISKVCSELDVDGLRGDIVTN
RAAKAYTAFQGKDSITIEDIEKIIVLCLRHRLRKDPLESIDSGYKVKKVF
EEIFEII*
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mRNA from alignment at E-siliculosus-1a_F_contig13832:1..624+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig13832.2281.1 ID=mRNA_E-siliculosus-1a_F_contig13832.2281.1|Name=mRNA_E-siliculosus-1a_F_contig13832.2281.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=624bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13832:1..624+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGTATTTTATACGTTGATGAAGTTAATCTCTTAGATGATCATTTAGTTGA
TATCTTATTAGATTCAGCAGCATCAGGTTGGAATACAGTTGAAAGAGAAG
GAATCTCTATCCGTCATCCTGCGCAATTTGTACTTGTTGGTTCAGGTAAT
CCTGAAGAGGGAGAATTACGTCCTCAATTGCTTGACCGTTTTGGAATGCA
TGCTGAAATAAGAACTGTTAAAGATCCTGATTTACGAGTAAAAATTGTAG
AAGAAAGAACTCTATTTGATTTAGACCCTTATGCATGGGTAGATAAATAT
AAAGATCAACAAGAAGCATTAAAAAAAAAAATTATTTCTGCTCAAAATTT
ATTGGATAAGGTTGAGATGCCTTATGATTTTAGATTAAAAATCTCAAAAG
TCTGTAGTGAGTTAGACGTTGATGGTTTGAGGGGAGATATAGTTACAAAT
AGAGCTGCTAAAGCCTACACAGCTTTTCAAGGTAAAGACAGTATTACAAT
AGAAGATATTGAAAAAATTATTGTGTTATGCTTACGACATCGTTTAAGAA
AAGATCCTTTAGAATCGATTGATTCAGGTTATAAAGTAAAAAAAGTTTTT
GAAGAAATTTTTGAAATTATTTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13832:1..624+

>mRNA_E-siliculosus-1a_F_contig13832.2281.1 ID=mRNA_E-siliculosus-1a_F_contig13832.2281.1|Name=mRNA_E-siliculosus-1a_F_contig13832.2281.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1248bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13832:1..624+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGTATTTTATACGTTGATGAAGTTAATCTCTTAGATGATCATTTAGTTGA
TATCTTATTAGATTCAGCAGCATCAGGTTGGAATACAGTTGAAAGAGAAG
GAATCTCTATCCGTCATCCTGCGCAATTTGTACTTGTTGGTTCAGGTAAT
CCTGAAGAGGGAGAATTACGTCCTCAATTGCTTGACCGTTTTGGAATGCA
TGCTGAAATAAGAACTGTTAAAGATCCTGATTTACGAGTAAAAATTGTAG
AAGAAAGAACTCTATTTGATTTAGACCCTTATGCATGGGTAGATAAATAT
AAAGATCAACAAGAAGCATTAAAAAAAAAAATTATTTCTGCTCAAAATTT
ATTGGATAAGGTTGAGATGCCTTATGATTTTAGATTAAAAATCTCAAAAG
TCTGTAGTGAGTTAGACGTTGATGGTTTGAGGGGAGATATAGTTACAAAT
AGAGCTGCTAAAGCCTACACAGCTTTTCAAGGTAAAGACAGTATTACAAT
AGAAGATATTGAAAAAATTATTGTGTTATGCTTACGACATCGTTTAAGAA
AAGATCCTTTAGAATCGATTGATTCAGGTTATAAAGTAAAAAAAGTTTTT
GAAGAAATTTTTGAAATTATTTAAGGTATTTTATACGTTGATGAAGTTAA
TCTCTTAGATGATCATTTAGTTGATATCTTATTAGATTCAGCAGCATCAG
GTTGGAATACAGTTGAAAGAGAAGGAATCTCTATCCGTCATCCTGCGCAA
TTTGTACTTGTTGGTTCAGGTAATCCTGAAGAGGGAGAATTACGTCCTCA
ATTGCTTGACCGTTTTGGAATGCATGCTGAAATAAGAACTGTTAAAGATC
CTGATTTACGAGTAAAAATTGTAGAAGAAAGAACTCTATTTGATTTAGAC
CCTTATGCATGGGTAGATAAATATAAAGATCAACAAGAAGCATTAAAAAA
AAAAATTATTTCTGCTCAAAATTTATTGGATAAGGTTGAGATGCCTTATG
ATTTTAGATTAAAAATCTCAAAAGTCTGTAGTGAGTTAGACGTTGATGGT
TTGAGGGGAGATATAGTTACAAATAGAGCTGCTAAAGCCTACACAGCTTT
TCAAGGTAAAGACAGTATTACAATAGAAGATATTGAAAAAATTATTGTGT
TATGCTTACGACATCGTTTAAGAAAAGATCCTTTAGAATCGATTGATTCA
GGTTATAAAGTAAAAAAAGTTTTTGAAGAAATTTTTGAAATTATTTAA
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