mRNA_E-siliculosus-1a_F_contig1382.2276.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: D7FP17_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP17_ECTSI) HSP 1 Score: 653 bits (1685), Expect = 1.440e-229 Identity = 323/331 (97.58%), Postives = 326/331 (98.49%), Query Frame = 1
Query: 418 VKPRWEGGPGCVFQASGWGTKERRRCLSMVAVGDVAGVEYSLRTEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVLEAAKAESVLETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKCFADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG 1410
+ PRWEGGPGCVFQASGWGTKERRRCLSMVAVGDVAGVEYSLRTEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGE+FKIDWNPDLAGTSLVMDVKVLEAAKAESVL+TATFAGGCFWGLELAFQRAKGVVSTK GYAQG VKNPTYSEVCSGKTGHTEAVQVLYDPSETKY DLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEK FADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG
Sbjct: 1 MNPRWEGGPGCVFQASGWGTKERRRCLSMVAVGDVAGVEYSLRTEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGESFKIDWNPDLAGTSLVMDVKVLEAAKAESVLKTATFAGGCFWGLELAFQRAKGVVSTKAGYAQGVVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYADLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKFFADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG 331
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: A0A835ZFH4_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFH4_9STRA) HSP 1 Score: 335 bits (858), Expect = 1.520e-105 Identity = 173/304 (56.91%), Postives = 222/304 (73.03%), Query Frame = 1
Query: 502 MVAVGDVAGVEYSLR-TEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVLEAAKAESVLETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKCFADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG 1410
MVA GDV V+ ++ + G PF++ FDQG+V+ VVG GGF P +H AV KM+ GE KE+ + DA+G+ D L ATL +D AP ++ G VL+LWTGQKA VT+++ + F +D N AG L + ++VL+AA S LETA FA GCFWGLELAFQRA GVVSTK GY QG+ K+PTY+EVC+G TGH EAV+VL+DP++T ++ LL +F+GRHDPTQ+NGQGND GTQYR GVY+H E QKA E+ A E A+ K + TE+ F+DAED HQQYL+KGGQ A+K A+ETIRCYG
Sbjct: 1 MVAKGDVVTVDLQVKDVKTGKPFDSTFDQGQVRFVVGAGGFLPAIHKAVEKMQVGEAKELQLSGDDAYGDADEALIATLPLDQAPPNLQRGQVLRLWTGQKARVTDVTADAFTLDMNRLNAGAVLSVALRVLDAAPP-STLETADFAAGCFWGLELAFQRAPGVVSTKVGYTQGAKKDPTYTEVCAGTTGHAEAVRVLFDPAQTTFDALLDVFWGRHDPTQLNGQGNDLGTQYRGGVYYHSEAQKAAIEESRARE-QAKHDKPIVTEVLPAATFWDAEDYHQQYLEKGGQIAKKAASETIRCYG 302
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: A0A7S1XWY0_9STRA (Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWY0_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.180e-84 Identity = 149/303 (49.17%), Postives = 196/303 (64.69%), Query Frame = 1
Query: 520 VAGVEYSLRTEDGSPF---ETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVLE-AAKAESVLETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKCFADEISARRLKKLATELEEVRE--FYDAEDEHQQYLQKGGQDARKEATETIRCYG 1410
V ++Y+++ +DG FDQG++ VV G + P +H A +E GE+ +T+P + AFG PE+ AT + +AP + +G VLQ+ TGQK VTE++ ++ ID N AG L ++ VL A ES + AGGCFWG+ELAFQRA GVV T GY G NPTY+EVCSG TGHTEAV++ YD +T +LL +FFGRHDPTQ+N QGND+GTQYR G+Y+H E+QK AE A + +++ TEL+ + F+ AED HQQYLQKGGQDA K ATETIRCYG
Sbjct: 48 VVEMDYAIKFKDGGAVVDPAPLFDQGKISFVVDHGNYLPGIHEAASTLEIGEKTTLTLPAEKAFGPDIPEMRATAPLAAAPPGVQLGDVLQVSTGQKVRVTEITKDSLTIDGNAPHAGKELELEATVLRRGALGESGVAVMDVAGGCFWGMELAFQRAAGVVGTAVGYTHGEKANPTYNEVCSGATGHTEAVRIYYDEEQTTPAELLDVFFGRHDPTQLNRQGNDRGTQYRGGIYYHTEEQKEAAEAAIAAQQKVYGDQEVVTELKPAADSDFWHAEDYHQQYLQKGGQDACKTATETIRCYG 350
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: A0A7S3UAA2_9CHLO (Peptidylprolyl isomerase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UAA2_9CHLO) HSP 1 Score: 274 bits (701), Expect = 5.270e-82 Identity = 144/315 (45.71%), Postives = 199/315 (63.17%), Query Frame = 1
Query: 466 GWGTKERRRCLSMVAVGDVAGVEYSLRTEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVLEAAKAESVLETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKCFADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG 1410
G G + + GD A V Y+ + +DGS F+T ++ ++ +VGGG +AVL ++ GE + + V P+ A+G +L A + +SAP + VG V+QL G A +T ++ + ID N LAG +L +V++L+ A S L ATF GGCFWGLELA+QR GV+ST GYA G+ ++PTY EVCSG+TGH EAVQV Y+P YE LL +F+ R DPT +N QGND GTQYR G+Y H +Q+ +A + DE A+ K + TE+E++ +Y AED HQQYLQKGGQ A KE ++ IRCYG
Sbjct: 18 GQGVRRAAAARAGAEPGDYATVHYTGKLDDGSVFDTSREREPLEFIVGGGKVIAGFDDAVLGLQAGESRMLQVGPEKAYGSPRTDLVADVPKESAPDGLEVGNVVQLSNGMTARITSVTDDAITIDANHPLAGMALTFEVELLDLVPASS-LGLATFGGGCFWGLELAYQRLPGVLSTSVGYANGTKEDPTYQEVCSGETGHAEAVQVTYNPKAVGYEQLLKLFWDRVDPTTLNRQGNDVGTQYRTGIYVHTPEQREIAHRSLKDE-QAKHEKPIVTEVEDLSVYYPAEDYHQQYLQKGGQSAEKECSDPIRCYG 330
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: A0A7S2WGJ4_9STRA (Peptidylprolyl isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGJ4_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.350e-79 Identity = 153/322 (47.52%), Postives = 199/322 (61.80%), Query Frame = 1
Query: 472 GTKERRRCLSMVAVGDVAGVEYSLRTEDGSP----FETRFDQGRVKLVVGGGGFAPFLHNAVLKME-PGEEKEVTVPPKDAFGEYDPEL-TATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVLEAAKAESV-LETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGR--HDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKCFADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG 1410
G R + +A GDV V++ + D + FD+G V+ VV GG+ P LH +VL M PGE+K T+ P+DAFG DP ++ D+AP + VG ++QL TG A VT ++ + ID N +LAG SL V+VLE E+ +E A FA GCFWG ELAF R GV++TK GY QG + P+Y EVCSG TGHTE VQV+YDP E + LL +F+ R + ++N GND+GTQYR GVYFH E+Q+ AEK A S R+ +ATE+ +F+DAED HQQYLQKGGQ A+K ETIRCYG
Sbjct: 28 GIAARMATATAIASGDVVKVDWRVVQSDSQQPLPAAQQVFDEGVVRFVVNSGGYLPALHQSVLSMSSPGEKKTFTIKPEDAFGPADPNRGPVSVPADAAPQGLKVGDMVQLMTGATARVTAVTADTITIDANHELAGKSLEATVEVLEHQSPEAAGVELADFAIGCFWGAELAFLRMPGVLATKVGYTQGEREEPSYEEVCSGSTGHTECVQVVYDPKEVSFNQLLDLFWERLGDNKYKLNQVGNDRGTQYRHGVYFHTEEQRLAAEKSRA---SLPRVSDIATEIMPADKFWDAEDYHQQYLQKGGQSAKKNDEETIRCYG 346
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: A0A8J9R9Y1_9CHLO (Probable peptide methionine sulfoxide reductase at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9R9Y1_9CHLO) HSP 1 Score: 256 bits (654), Expect = 2.400e-75 Identity = 143/312 (45.83%), Postives = 198/312 (63.46%), Query Frame = 1
Query: 499 SMVAVGDVAGVEYSLRTEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDIS--VGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVLEAAKAESVLETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKCFADEISARRLKK-LATELEEVREFYDAEDEHQQYLQKGG-----QDARKEATETIRCYG 1410
++ A D V Y +DG+ F+ ++ + +VGGG +AV+ + GE + VPP++A+GE+ ELTA++ P S G ++L G A V E + E K+D+NP +AG +L +V++++ KA S L+ ATF GCFWG EL FQR GVV+T+ GY+QG V+NPTY +VCSG TGHTEAVQV YDPS YE+LL F+ + DPTQVNGQG D+GTQYR G+Y H E+Q +AE +D A++L+ +ATE+E VR ++ AE+ HQ+YL KGG QD K T+ IRCYG
Sbjct: 8 NVAAPRDYVLVHYKGTLDDGTVFDCSHEREPLGFIVGGGKVIRGFDDAVIGLAKGERRTERVPPENAYGEWRSELTASIPTAQLPEGTSFKAGDSVRLSNGADAVVIESTDEALKLDFNPPMAGKALTFEVELVKLTKA-SHLQKATFGAGCFWGPELMFQRIPGVVATEVGYSQGHVENPTYEDVCSGDTGHTEAVQVTYDPSLVSYEELLGAFWKQIDPTQVNGQGGDRGTQYRTGIYTHTEEQLHIAEASKSD--MAKQLQAPIATEVEAVRSYWTAEEYHQEYLAKGGRFGRAQDPSKGCTDPIRCYG 316
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: A0A7S4JD19_9EUKA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JD19_9EUKA) HSP 1 Score: 255 bits (652), Expect = 1.420e-74 Identity = 155/315 (49.21%), Postives = 191/315 (60.63%), Query Frame = 1
Query: 514 GDVAGVEYSLRT----EDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEP-GEEKEVTVPPKDAFGEYDPEL-TATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVLEAAK-AESVLETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGRHDPTQ--VNGQGNDKGTQYRAGVYFHDEQQKAVAEKCFADEISARRLKKLA-------TELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG 1410
GD V YSL E + E FDQG V LVVG GGF P LH+ + + G + T+ P + FG+ +P L A + + S P + G ++L TG KA VTE+ E ID N LAG L + V++L + + A VL+TATFAGGCFWGLELAFQR GVV+T GY QGS+ +PTY VCSG TGHTEAV V YDP+E Y L +F+ R + +N GND+GTQYR G+Y HDE Q VA A L+KLA TE+ +F+DAED HQQYLQKGGQDA+K A ETIRCYG
Sbjct: 47 GDYVKVRYSLADAATKEPLTGPEAVFDQGEVSLVVGAGGFIPGLHSRIPSLAAVGATEMFTLTPAECFGDANPALGPARVPLASCPPGLEAGMKVRLATGMKAVVTEVDDEAVTIDANHPLAGKELELTVELLGSPQPAADVLQTATFAGGCFWGLELAFQRETGVVTTAVGYTQGSIDDPTYEAVCSGTTGHTEAVLVKYDPTEVSYNRLCELFWERLGDNRFLLNQVGNDRGTQYRHGIYTHDEAQAEVA---------AASLEKLAVDGKPIHTEVLAAEKFWDAEDYHQQYLQKGGQDAKKSAEETIRCYG 352
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: A0A7S0Q160_9EUKA (Peptidylprolyl isomerase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q160_9EUKA) HSP 1 Score: 253 bits (645), Expect = 1.560e-73 Identity = 145/312 (46.47%), Postives = 193/312 (61.86%), Query Frame = 1
Query: 496 LSMVAVGDVAGVEYSLR--TEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEP-GEEKEVTVPPKDAFGEYDPEL-TATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVL-EAAKAESVLETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGRHDPTQ--VNGQGNDKGTQYRAGVYFHDEQQKAVAEKCFADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG 1410
+ M VGD V Y L T G +T FD G V LVVG G F P LH + + GE+K + P + FG+ DP L + +++AP + G +QL TG KA V ++ E ID N LAG L + V+++ + A+SVL+ ATFAGGCFWGLELAFQR GV++T GY+QG VK P+Y +VCSG TGHTEAV + +DP++T Y+ L +F+ R + +N GND+GTQYR G+Y H ++Q VA+ A +++ TE++ F+DAED HQQYLQKGGQ ARK A ETIRCYG
Sbjct: 44 MGMAQVGDYVSVRYGLADATTGGVLKDTAFDIGEVSLVVGTG-FIPGLHARIASLSAVGEQKSFELAPAEGFGDTDPRLGPVRVPLENAPPGLETGMQVQLSTGLKARVADVDDEAVTIDANHPLAGKPLKLTVELISQPLPAQSVLQCATFAGGCFWGLELAFQREPGVIATAVGYSQGGVKEPSYEQVCSGSTGHTEAVTLQFDPAKTTYQRLCELFWDRLGDNRHLLNQVGNDRGTQYRHGIYPHTDKQMEVAKASLEAVQQAAGGREIFTEIKAAEFFWDAEDYHQQYLQKGGQSARKYAKETIRCYG 354
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: A0A250X1X3_9CHLO (Peptidylprolyl isomerase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X1X3_9CHLO) HSP 1 Score: 251 bits (642), Expect = 2.950e-73 Identity = 137/320 (42.81%), Postives = 187/320 (58.44%), Query Frame = 1
Query: 475 TKERRRCLSMVAV---GDVAGVEYSLRTEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVLEAAKAESVLETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKCFADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGG-----QDARKEATETIRCYG 1410
T R C+S GD V Y+ +DGS F++ + ++ ++G G AV + G ++ + P DA+GE DP L + SAP + G +QL G ATV + EN +D N +LAG +L DV+++E +A S + ATF GCFW +ELA+QR GV+ST+ GY GSV NPTY +VCSG+TGH E VQV+YDP + YE LL +F+G+HDPT +N QG D GTQYR+G+Y H +Q+ VA K A+ + TE+ EV ++ AED HQQYL KGG Q+ K T+ IRCYG
Sbjct: 25 TVRRPLCVSATETAGPGDSVKVHYTGTLDDGSVFDSSRQREPLEFIIGAGSVIKGFDTAVTGLAVGGTRKSRISPADAYGEKDPSLQMSFPASSAPEGLKEGVKVQLSNGMVATVLKADKENITLDLNHELAGQALTFDVELMELTQA-SKMARATFGAGCFWSVELAYQRTPGVISTEVGYCNGSVDNPTYEQVCSGRTGHAEVVQVVYDPGQVSYEKLLDVFWGKHDPTTLNRQGGDVGTQYRSGIYCHTPEQREVAMKSLKA-AQAKFSAPIVTEIAEVSKYTAAEDYHQQYLAKGGRNGNPQNPSKGCTDPIRCYG 342
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Match: I0Z6H8_COCSC (Peptidylprolyl isomerase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z6H8_COCSC) HSP 1 Score: 249 bits (636), Expect = 6.150e-73 Identity = 136/304 (44.74%), Postives = 190/304 (62.50%), Query Frame = 1
Query: 529 VEYSLRTEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDIS--VGTVLQLWTGQKATVTEMSGENFKIDWNPDLAGTSLVMDVKVLEAAKAESVLETATFAGGCFWGLELAFQRAKGVVSTKTGYAQGSVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYEDLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKC---FADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGG-----QDARKEATETIRCYG 1410
V Y +DG+ F++ ++ + +VG G +AV+ + GE ++ VPP++A+GE+ ELT ++ P S G ++L G A V EM+ + +D+NP +AG +L +V++++ KA S L ATFA GCFWG EL FQR GVV+T+ GY+QG +NPTY +VCSG TGHTEAVQV YD YEDLL F+ + DPTQVNGQG D+GTQYR G+Y H+E+Q +AE A+++ A +ATE+EEV+ ++ AED HQ+YL KGG QD K + IRCYG
Sbjct: 3 VHYEGTLDDGTVFDSSHEREPLGFIVGSGKVIRGFDDAVIGLSKGERRKERVPPENAYGEWRSELTTSIPTSQLPEGASFKAGDNVRLSNGASAVVKEMTSDALTLDFNPPMAGKALTFEVELVKLTKA-SHLHKATFAAGCFWGPELMFQRIPGVVATEVGYSQGQTENPTYEDVCSGDTGHTEAVQVTYDSGLVSYEDLLEAFWKQIDPTQVNGQGGDRGTQYRTGIYAHNEEQLQIAEASKSKIAEDLKAA----IATEVEEVQNYWAAEDYHQEYLAKGGRFGRPQDPSKGCDDPIRCYG 301 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1382.2276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1382.2276.1 >prot_E-siliculosus-1a_F_contig1382.2276.1 ID=prot_E-siliculosus-1a_F_contig1382.2276.1|Name=mRNA_E-siliculosus-1a_F_contig1382.2276.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=379bp MGWKQTAAVGSSIAAMVLARRAASFVRAPTPTAGMRRAIAGGAGGASVKPback to top mRNA from alignment at E-siliculosus-1a_F_contig1382:11798..23032+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1382.2276.1 ID=mRNA_E-siliculosus-1a_F_contig1382.2276.1|Name=mRNA_E-siliculosus-1a_F_contig1382.2276.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11235bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1382:11798..23032+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1382:11798..23032+ >mRNA_E-siliculosus-1a_F_contig1382.2276.1 ID=mRNA_E-siliculosus-1a_F_contig1382.2276.1|Name=mRNA_E-siliculosus-1a_F_contig1382.2276.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2274bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1382:11798..23032+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |