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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 1806 |
| Model size | 1806 |
| Exons | 5 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig138.2262.1 >prot_E-siliculosus-1a_F_contig138.2262.1 ID=prot_E-siliculosus-1a_F_contig138.2262.1|Name=mRNA_E-siliculosus-1a_F_contig138.2262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=602bp
MNDNIEDDSTSIYNIDNSSSSRSNRSVRSRAALETCSQHEEVTRIPFSSS
AHHSDEHQGTVDPPQGCSPSRWPTPQSVRSSSGYLFYACEAGDSPGGSSP
ERASIEGRNQRSPRRGRQRRRRRQPSNRQNREQVWPRSNQGTKARRTENT
GWQQCPGDPNRGWNVPNNSEGGNNVLGGLPVLVGDIRGAMVAVWLAWGVR
IDVVRERLRRQKRRLQAIHRAEAAKLERSTHAEACTGDNALDRITPQVLD
CIVREAALRQIGESERANGVRREALQASKQDSARRKYAWRYRRPMLESGL
RQRQESELLALRNAAESLEAQLVRARDETVRLLQLHLSRAQRIIASGVAR
TAAVQTRCPVGASPVLREADFVKLGNVLLHAQETASCSIERALQTNRDQS
ASAVSNILDNEVRGNACGSTLAVTSARCLWCNAASADTGTLFRRYGNAGG
IRATRPYNRMRTTTARHHCEDLQQPHRRLARDIQYPAPRRHRPHDHKQRD
TEIEEGPGTRRSCDQAPPPSPMENISSSQAAALEHSPSPNKPLGGREDVL
FDQDGGGYTTPGAPFCSWGCARKWNDRFSPLQSRHERGLRIDIAAGRVVR
T* back to topmRNA from alignment at E-siliculosus-1a_F_contig138:71078..74769+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig138.2262.1 ID=mRNA_E-siliculosus-1a_F_contig138.2262.1|Name=mRNA_E-siliculosus-1a_F_contig138.2262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3692bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig138:71078..74769+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAACGACAACATCGAAGACGACAGCACCAGCATCTACAACATCGACAA
CAGCAGCAGCAGCCGGAGCAACAGAAGTGTCCGGTCGAGGGCGGCCTTGG
AAACCTGTAGCCAACACGAAGAGGTAACGAGAATTCCGTTCTCCTCTTCC
GCCCATCATAGCGACGAGCACCAGGGTACGGTAGACCCGCCGCAAGGTTG
TTCTCCCTCTCGCTGGCCGACCCCCCAGTCTGTTCGGTCCTCCAGCGGGT
ACCTGTTCTATGCCTGCGAAGCCGGCGATTCTCCCGGCGGCAGCTCCCCT
GAGCGAGCATCGATTGAAGGAAGGAACCAGCGGTCGCCGCGACGGGGGCG
GCAGCGGCGGCGGCGGCGACAACCAAGCAACAGACAGAACAGAGAGCAAG
TTTGGCCACGTTCTAACCAAGGCACAAAAGCACGTCGCACGGAAAACACG
GGTTGGCAGCAATGCCCTGGCGACCCCAACAGAGGATGGAACGTCCCCAA
CAACAGCGAGGGTGGCAACAACGTTCTTGGTGGACTACCGGTCCTCGTGG
GAGATATAAGAGGAGCGATGGTAGCGGTGTGGTTGGCGTGGGGCGTACGA
ATAGACGTGGTGAGAGAAAGACTCCGGCGGCAGAAGAGACGGCTGCAGGC
TATTCACCGGGCGGAAGCTGCGAAGGTGACAAGTGATACCGGGCGTGTCA
CGGTCTTTCTCGTGTAGGGCACGAATCCATGAAGAGTTCACACATACTCG
CACGTAAGAGACAAAATCATCTGTTTTTCTTCCTCTCTTCACGTCTCTAA
TGCAACATTTCCCGCGTACGGAGGCTGACACCGTACGTGGGTCAATAGGC
CACGTGCCCTGTTTTTCCCTCGTAGCTTGTGGGAAGCACACATACATGTC
GTTTTTTCTCGTGTACAGTAAGACGTTTGCCGTGCTACATAGCAGTCCCA
GCCGGCTGCCCATTGTCGGCGTGGAGGTGGAAACAATATTTTCGGCAGGA
AAGTTCACATTAGAATGGACAATAGCAGATGCGAGCTAGGCGTCACGTGC
AAAATATTGAAGCTGGCCCGGGGTGAGTTGTGCAAGACGTGAGCTAGAAG
AATACTCACATGTTTCGAGGAGCCTTCCAAGGGCTGCTACGCGTAGAACC
TGGCCAACGATTTCCCCGTCCGCGAACCACGTCGACGGAAACGGATGCCT
TGCACATCACTTATGGCTTCGCCAAACAGAAATGATGATTCGCTTTCCAC
TGTCCGCTTCCTTACCCCAATTTCCCTTTCACTACGCGCTCGCGTAGCTG
GAGCGTTCAACTCACGCGGAGGCATGCACCGGAGATAACGCGCTCGACAG
AATCACTCCCCAGGTGCTCGATTGCATCGTAAGAGAGGCGGCGTTGAGGC
AAATCGGAGAATCGGAGCGGGCAAACGGTGTAAGGAGAGAGGCTCTACAA
GCCAGGTTAGCCAAGATGAAAATTTATCTGTATTTATGTCGCGAGGAACG
TCATCTTGTGTAGCCACAGCGCACAAGATCAGTATTGGTAAAGGAGGAAG
AAATCCTGCGTGATTTGTAAGTCAGGTATTGATAACGAACTAAGCCTCCG
AAGTGTTGATCTTTGACGAGTCCCTTTCACGAATCTCGCAGGAGATTTGC
GAATCTTGCTCCATTGACAGACCCTACAAATTCAGATAGGTGATTTGTGG
CGGAGCACGTCCATGACAGCTGCGACCTTCTGGAAGATAGCAACATGTTT
CTCGTTTTGAAATTTCGACTACCTGAAGGCAAGGCTTGTTGATGTTCGTG
GATTGGCGTAGCATTTTCCTGAACACTCCTCAAACCTTCAACCCCAAAGC
GCAGAGAACGTCGGCCTAACCAACCCTCCGCAAATTATCCTCTCCCGTTC
GGTGCCCGGATGACATATGTATCCGAATGATCATTGTTCGTGGTGGTGAC
ATTTCCTGCTCCTTGCTGCCGCAGTAAACAGGACTCGGCCAGGAGGAAGT
ACGCTTGGAGATACCGAAGACCGATGCTGGAATCGGGACTTCGACAGAGG
CAGGAGTCTGAACTACTCGCCCTTCGAAACGCGGCGGAATCACTTGAGGT
ATTTCTGGGTTTGGGCGAGGGGGTGTCCGCAGGATTGACGCTGTGCTACA
CCCTTGTGACCACAGGTTCGATCGTGTTTTCCATTGCGCGGTTATGCATG
TGATGTTGGGGTCCGCAAAGTTCGCCACCTCTCCACGCTGTCGTCGTGTC
CGGACTCCACTGGCGGGATACGTCAGTCGTTTCACATTGACGTTGGTTCA
CCTTTCTTTCGAAATGCCGCAGAACTGGAGTTGAAGGGGACATGAACGAT
TGTGAGGTTACATGTACCCACGTTCAGGAAACGAGTTCAGTTGAAACCGT
GCCTCGTGCTGGTTTTGACCATTTTATCAGGCACAGCTGGTTAGAGCTCG
CGATGAGACTGTGCGGCTCCTCCAGTTGCACCTCTCTCGTGCGCAGCGCA
TAATCGCGTCTGGAGTGGCACGCACAGCGGCAGTACAAACGTAAGCGTTG
TTTTGCGACAGTCCACTACGTTCCTCTTGGCCAGGTCCTCCAATAAATAG
ATTCAGCTAACTCTGAAATTGTTTTCATCTCTCCCTGTTTCAGTTTTGAC
ACAGTTGGGAGCCCCACAACGCGATCATTCTGTGAGTCGTGAAAAATTTC
TACCGTGTCTCGACGGCGGCGACAGCGAAAGCCGCTTTGATATGAACACC
GTGAATGCCTTGTCGGTTGTTCGTTGCTGAGTTGGACCTCAATTGTTGGC
ACCATGCAGTGCTCACACCCGCCACCACCGGTGCTGTCCCGGATACGTTG
AAGAATCAAACTGCTTTGAAGACAGATGTATGATGGATCGCCCTTCAGCG
GTGCCTCTCCCGCACGAATCGGCCCCGATCCCTAGCTCCAGGCCAAAGCA
CAGGCGGTGTCCAGTGGGAGCATCGCCCGTGCTGCGAGAGGCAGACTTCG
TCAAACTCGGGAATGTGCTTCTTCATGCACAAGAGACCGCCAGCTGTTCC
ATCGAAAGGGCTTTACAAACCAACAGGGATCAATCTGCTTCGGCCGTCTC
GAATATTCTGGACAACGAAGTGCGTGGAAACGCATGTGGAAGCACCCTTG
CAGTCACCTCTGCTCGGTGTCTATGGTGCAATGCCGCCTCGGCGGACACG
GGAACGCTGTTCCGTCGGTACGGCAACGCCGGCGGCATTCGGGCGACTAG
GCCCTACAACCGCATGCGAACAACCACAGCACGACACCATTGCGAGGACC
TACAACAACCTCACCGACGGCTTGCGAGAGATATTCAGTATCCAGCGCCA
CGCCGCCACCGCCCCCACGACCACAAGCAAAGAGACACAGAGATAGAGGA
AGGACCAGGAACGCGCCGTTCGTGCGATCAAGCACCGCCCCCTTCGCCGA
TGGAAAATATATCTTCCAGTCAGGCCGCAGCATTGGAACACTCACCTTCT
CCTAACAAGCCGTTGGGTGGAAGAGAAGACGTGCTGTTTGACCAGGATGG
TGGCGGCTACACCACACCGGGCGCACCATTTTGCTCTTGGGGGTGCGCCA
GGAAGTGGAACGACAGATTTTCGCCCTTGCAGAGCCGACACGAGAGGGGT
CTACGAATCGACATCGCAGCAGGAAGGGTTGTCCGGACATAG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig138:71078..74769+ >mRNA_E-siliculosus-1a_F_contig138.2262.1 ID=mRNA_E-siliculosus-1a_F_contig138.2262.1|Name=mRNA_E-siliculosus-1a_F_contig138.2262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3612bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig138:71078..74769+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAACGACAACATCGAAGACGACAGCACCAGCATCTACAACATCGACAA
CAGCAGCAGCAGCCGGAGCAACAGAAGTGTCCGGTCGAGGGCGGCCTTGG
AAACCTGTAGCCAACACGAAGAGGTAACGAGAATTCCGTTCTCCTCTTCC
GCCCATCATAGCGACGAGCACCAGGGTACGGTAGACCCGCCGCAAGGTTG
TTCTCCCTCTCGCTGGCCGACCCCCCAGTCTGTTCGGTCCTCCAGCGGGT
ACCTGTTCTATGCCTGCGAAGCCGGCGATTCTCCCGGCGGCAGCTCCCCT
GAGCGAGCATCGATTGAAGGAAGGAACCAGCGGTCGCCGCGACGGGGGCG
GCAGCGGCGGCGGCGGCGACAACCAAGCAACAGACAGAACAGAGAGCAAG
TTTGGCCACGTTCTAACCAAGGCACAAAAGCACGTCGCACGGAAAACACG
GGTTGGCAGCAATGCCCTGGCGACCCCAACAGAGGATGGAACGTCCCCAA
CAACAGCGAGGGTGGCAACAACGTTCTTGGTGGACTACCGGTCCTCGTGG
GAGATATAAGAGGAGCGATGGTAGCGGTGTGGTTGGCGTGGGGCGTACGA
ATAGACGTGGTGAGAGAAAGACTCCGGCGGCAGAAGAGACGGCTGCAGGC
TATTCACCGGGCGGAAGCTGCGAAGATGAACGACAACATCGAAGACGACA
GCACCAGCATCTACAACATCGACAACAGCAGCAGCAGCCGGAGCAACAGA
AGTGTCCGGTCGAGGGCGGCCTTGGAAACCTGTAGCCAACACGAAGAGGT
AACGAGAATTCCGTTCTCCTCTTCCGCCCATCATAGCGACGAGCACCAGG
GTACGGTAGACCCGCCGCAAGGTTGTTCTCCCTCTCGCTGGCCGACCCCC
CAGTCTGTTCGGTCCTCCAGCGGGTACCTGTTCTATGCCTGCGAAGCCGG
CGATTCTCCCGGCGGCAGCTCCCCTGAGCGAGCATCGATTGAAGGAAGGA
ACCAGCGGTCGCCGCGACGGGGGCGGCAGCGGCGGCGGCGGCGACAACCA
AGCAACAGACAGAACAGAGAGCAAGTTTGGCCACGTTCTAACCAAGGCAC
AAAAGCACGTCGCACGGAAAACACGGGTTGGCAGCAATGCCCTGGCGACC
CCAACAGAGGATGGAACGTCCCCAACAACAGCGAGGGTGGCAACAACGTT
CTTGGTGGACTACCGGTCCTCGTGGGAGATATAAGAGGAGCGATGGTAGC
GGTGTGGTTGGCGTGGGGCGTACGAATAGACGTGGTGAGAGAAAGACTCC
GGCGGCAGAAGAGACGGCTGCAGGCTATTCACCGGGCGGAAGCTGCGAAG
CTGGAGCGTTCAACTCACGCGGAGGCATGCACCGGAGATAACGCGCTCGA
CAGAATCACTCCCCAGGTGCTCGATTGCATCGTAAGAGAGGCGGCGTTGA
GGCAAATCGGAGAATCGGAGCGGGCAAACGGTGTAAGGAGAGAGGCTCTA
CAAGCCAGCTGGAGCGTTCAACTCACGCGGAGGCATGCACCGGAGATAAC
GCGCTCGACAGAATCACTCCCCAGGTGCTCGATTGCATCGTAAGAGAGGC
GGCGTTGAGGCAAATCGGAGAATCGGAGCGGGCAAACGGTGTAAGGAGAG
AGGCTCTACAAGCCAGTAAACAGGACTCGGCCAGGAGGAAGTACGCTTGG
AGATACCGAAGACCGATGCTGGAATCGGGACTTCGACAGAGGCAGGAGTC
TGAACTACTCGCCCTTCGAAACGCGGCGGAATCACTTGAGTAAACAGGAC
TCGGCCAGGAGGAAGTACGCTTGGAGATACCGAAGACCGATGCTGGAATC
GGGACTTCGACAGAGGCAGGAGTCTGAACTACTCGCCCTTCGAAACGCGG
CGGAATCACTTGAGGCACAGCTGGTTAGAGCTCGCGATGAGACTGTGCGG
CTCCTCCAGTTGCACCTCTCTCGTGCGCAGCGCATAATCGCGTCTGGAGT
GGCACGCACAGCGGCAGTACAAACGCACAGCTGGTTAGAGCTCGCGATGA
GACTGTGCGGCTCCTCCAGTTGCACCTCTCTCGTGCGCAGCGCATAATCG
CGTCTGGAGTGGCACGCACAGCGGCAGTACAAACGCGGTGTCCAGTGGGA
GCATCGCCCGTGCTGCGAGAGGCAGACTTCGTCAAACTCGGGAATGTGCT
TCTTCATGCACAAGAGACCGCCAGCTGTTCCATCGAAAGGGCTTTACAAA
CCAACAGGGATCAATCTGCTTCGGCCGTCTCGAATATTCTGGACAACGAA
GTGCGTGGAAACGCATGTGGAAGCACCCTTGCAGTCACCTCTGCTCGGTG
TCTATGGTGCAATGCCGCCTCGGCGGACACGGGAACGCTGTTCCGTCGGT
ACGGCAACGCCGGCGGCATTCGGGCGACTAGGCCCTACAACCGCATGCGA
ACAACCACAGCACGACACCATTGCGAGGACCTACAACAACCTCACCGACG
GCTTGCGAGAGATATTCAGTATCCAGCGCCACGCCGCCACCGCCCCCACG
ACCACAAGCAAAGAGACACAGAGATAGAGGAAGGACCAGGAACGCGCCGT
TCGTGCGATCAAGCACCGCCCCCTTCGCCGATGGAAAATATATCTTCCAG
TCAGGCCGCAGCATTGGAACACTCACCTTCTCCTAACAAGCCGTTGGGTG
GAAGAGAAGACGTGCTGTTTGACCAGGATGGTGGCGGCTACACCACACCG
GGCGCACCATTTTGCTCTTGGGGGTGCGCCAGGAAGTGGAACGACAGATT
TTCGCCCTTGCAGAGCCGACACGAGAGGGGTCTACGAATCGACATCGCAG
CAGGAAGGGTTGTCCGGACATAGGCGGTGTCCAGTGGGAGCATCGCCCGT
GCTGCGAGAGGCAGACTTCGTCAAACTCGGGAATGTGCTTCTTCATGCAC
AAGAGACCGCCAGCTGTTCCATCGAAAGGGCTTTACAAACCAACAGGGAT
CAATCTGCTTCGGCCGTCTCGAATATTCTGGACAACGAAGTGCGTGGAAA
CGCATGTGGAAGCACCCTTGCAGTCACCTCTGCTCGGTGTCTATGGTGCA
ATGCCGCCTCGGCGGACACGGGAACGCTGTTCCGTCGGTACGGCAACGCC
GGCGGCATTCGGGCGACTAGGCCCTACAACCGCATGCGAACAACCACAGC
ACGACACCATTGCGAGGACCTACAACAACCTCACCGACGGCTTGCGAGAG
ATATTCAGTATCCAGCGCCACGCCGCCACCGCCCCCACGACCACAAGCAA
AGAGACACAGAGATAGAGGAAGGACCAGGAACGCGCCGTTCGTGCGATCA
AGCACCGCCCCCTTCGCCGATGGAAAATATATCTTCCAGTCAGGCCGCAG
CATTGGAACACTCACCTTCTCCTAACAAGCCGTTGGGTGGAAGAGAAGAC
GTGCTGTTTGACCAGGATGGTGGCGGCTACACCACACCGGGCGCACCATT
TTGCTCTTGGGGGTGCGCCAGGAAGTGGAACGACAGATTTTCGCCCTTGC
AGAGCCGACACGAGAGGGGTCTACGAATCGACATCGCAGCAGGAAGGGTT
GTCCGGACATAG back to top
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