mRNA_E-siliculosus-1a_F_contig1374.2241.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1374.2241.1 vs. uniprot
Match: D7G599_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G599_ECTSI) HSP 1 Score: 1951 bits (5054), Expect = 0.000e+0 Identity = 1024/1088 (94.12%), Postives = 1036/1088 (95.22%), Query Frame = 1
Query: 433 MSGVGDDKAAFDESAENPSKKNNVDESKADHIGENEPCDGEVPRQTTAVIDKHMGAGETADGFVDGKIESCAVAEMGEIGASPQPLVLADVTSEALRANPKASLRQTELNAVSDVEIEEQEEGGPTFTDHEEEKQETATSVTRPQNQDEGSTQDXXXXXXXXXXXXSDSVNPKDEQVFVSSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQARTKRSLSHRPWNAGPGEQATKRGPLGPAPKPFKKIVPYHTQKEKRAAEEHDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVTPEKTEEEKARLPWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAELDGRQDELNRALTKALKARCGGETIMAFATLGQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAITKKDKALQKVLKKTDPAILVEISEEAVTSTGMGIYRQTKRAGGRNGSATGESSAVLQPAERPEQLRQKFAHSLKSQIKGKDKALLKEITALEEDETEQIMGDFGKGAGVLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGATSAAQEGRRGVPIHEKGNGKKGAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSANRPWPTPATEPRTDTWFQTSGRIGLGTQQRAWAEISCSPTNSQTLRGGFVARPHSAAAEISKKLQTPPRRPATACGTRVPRESTDNAVAASSVSSTNQARDHEQDHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASAASRPTRRRGKPRKTSATAPVNATTEAEGEHEWDATPGDPSTGPGPIDTGGSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRINGNRRGGKGNPRQEDDTTKRKHRRDKRHQSRISGDDDPVDMDWEKVDI 3696
MSGVG DKAA DESAENPSKKNNVDESKADHIGENEPCDGEVPRQTTA IDKHMGA ETADGFVDGKIESCAVAEMGEIGASP PLVLA+VTSEAL ANP+ASLRQ ELNAVSDVEIEEQEEGGPT TDHEEEKQE ATSVT PQNQDEGSTQD XXXXXXXXXSD NPKDE VFVSSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQAR KRSLSHRPWNAGPGEQATKRGPLGPAPKPFKKIVPY TQKEKRAAEE+DTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVTPEKTEEEKARLPWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAE+DGRQDELNRALTKALK GQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAI KKDKALQKVLKKTDPAILVEISEEAVTSTGMGIYRQTKRAGGRNGSATGESSAVLQPAERPEQLRQKFAHSLK+QIKGKDKALLKEI ALEEDE EQ+MGDFGKG VLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGATSAAQEGRRGVPIHEKGNGKKGAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSANRPWPTP TEPRTDT FQTSGR+GLGTQQRAWAEISCSPT+SQTLRG FVARP SAAAEISK LQTPPRRPATACGTRVPREST NAVAAS+VSS NQAR+HEQ HRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASAASR TR RGKPRKTSATAPVNATTEAEGEHEWDATPGDPSTGPGPID G SGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRINGNR GGKG+PRQEDDTTKRKHRRDKRHQSRISGDD PVDMDWEKV +
Sbjct: 1 MSGVGGDKAALDESAENPSKKNNVDESKADHIGENEPCDGEVPRQTTADIDKHMGACETADGFVDGKIESCAVAEMGEIGASPPPLVLANVTSEALSANPEASLRQAELNAVSDVEIEEQEEGGPTLTDHEEEKQENATSVTCPQNQDEGSTQDMKEXXXXXXXXXSDWANPKDEGVFVSSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQARRKRSLSHRPWNAGPGEQATKRGPLGPAPKPFKKIVPYRTQKEKRAAEENDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVTPEKTEEEKARLPWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAEIDGRQDELNRALTKALK--------------GQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAIAKKDKALQKVLKKTDPAILVEISEEAVTSTGMGIYRQTKRAGGRNGSATGESSAVLQPAERPEQLRQKFAHSLKAQIKGKDKALLKEIAALEEDEAEQMMGDFGKGTEVLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGATSAAQEGRRGVPIHEKGNGKKGAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSANRPWPTPTTEPRTDTLFQTSGRVGLGTQQRAWAEISCSPTSSQTLRGDFVARPRSAAAEISKNLQTPPRRPATACGTRVPRESTANAVAASNVSSANQAREHEQGHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASAASRQTRPRGKPRKTSATAPVNATTEAEGEHEWDATPGDPSTGPGPIDAGDSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRINGNRIGGKGDPRQEDDTTKRKHRRDKRHQSRISGDDVPVDMDWEKVGV 1074
BLAST of mRNA_E-siliculosus-1a_F_contig1374.2241.1 vs. uniprot
Match: A0A6H5JWU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU4_9PHAE) HSP 1 Score: 1874 bits (4855), Expect = 0.000e+0 Identity = 994/1147 (86.66%), Postives = 1026/1147 (89.45%), Query Frame = 1
Query: 433 MSGVGDDKAAFDESAENPSKKNNVDESKADHIGENEPCDGEVPRQTTAVIDKHMGAGETADGFVDGKIESCAVAEMGEIGASPQPLVLADVTSEALRANPKASLRQTELNAVSDVEIEEQEEGGPTFTDHEEEKQETATSVTRPQNQDEGSTQDXXXXXXXXXXXXSDSVNPKDEQVFVSSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQARTKRSLSHRPWNAGPGEQATKRGPLGPAPKPFKKIVPYHTQKEKRAAEEHDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVTPEKTEEEKARLPWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAELDGRQDELNRALTKALKARCGGETIMAFATLGQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAITKKDKALQKVLKKTDPAILVEISEEAVTSTGMGIYRQTKRAGGRNGSATGESSAVLQPAERPEQLRQKFAHSLKSQIKGKDKALLKEITALEEDETEQIMGDFGKGAGVLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGATSAAQEGRRGVPIHEKGNGKKGAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSANRPWPTPATEPRTDTWFQTSGRIGLGTQQRAWAEISCSPTNSQTLRGGFVARPHSAAAEISKKLQTPPRRPATACGTRVPRESTDNAVAASSVSSTNQARDHEQDHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASAASRPTRRRGKPRKTSATAPVNATTEAEGEHEWDATPGDPSTGPGPIDTGGSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRINGNRRGGKGNPRQEDDTTKRKHRRDKRHQSRISGDDDPVDMDWEKVDIARLINGSKEIEKVLDGKFFAVVTDDESPVHLGECFQEAQELVESSNVLLGCPENERERF 3873
MS V D KAAFDESAENPSKKNNVDESKADHIGE +PCDGEVPRQTTA IDKHMGA ETADGFVDGKIE C VA+M EIGASPQPLVLADVTSEAL ANP+A LRQTELNAVSDV++E+Q+EGGPT TDHEEE QETATSVT PQNQDEGSTQD XXXXXXX SDS NPKDE+VF+SSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQ R KRSLSHRPWNAGPGE+ATKRGPLGPAPKPFKKIVPY TQKEKRAAEE+DTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKV+ E ++ + + KA GQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAI KKDKALQKVLKKTDPAILVEISEEAVTSTG+GIYRQTKRAGGRNGSATG SSAVLQP ERPEQLRQKFAHSLKSQ+K KDKALLKEI ALEEDETEQIMG+FGKGAGVLPNSWRQDPEGL RMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLG +SAAQEGRR VPIHEKGNGKK AERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYS NRP PT TEP TDT FQTSGRIGLGTQQRAW EISCSPT+SQTLRGGFVARPHSAAA+ISKKL+TPPRRPATACGTRVPRESTDNAVAAS+VSSTNQAR+HEQDHRSDEQSRDLHVQ+GPGVTVLWARLCSPSSDLVYKRSVWPEA AASRPTRRRGKPRKTSATAPVN TT AEGEHEWDATPGDPSTGPGPI G SGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKR+FRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRIN NRRGG+GNPRQEDDTTKRKHRRDKRHQSRISG+DDPVDMDWEKVDIARLINGSKEIEKVLDGKFFAVVTDDESPVHLGECFQEAQELVES++VLLGCPENERER+
Sbjct: 1 MSAVVDHKAAFDESAENPSKKNNVDESKADHIGE-KPCDGEVPRQTTAEIDKHMGACETADGFVDGKIELCVVADMREIGASPQPLVLADVTSEALSANPEAGLRQTELNAVSDVKVEQQDEGGPTLTDHEEEIQETATSVTCPQNQDEGSTQDMEKXXXXXXXEDSDSANPKDEEVFISSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQVRRKRSLSHRPWNAGPGEEATKRGPLGPAPKPFKKIVPYRTQKEKRAAEENDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVSYE-----------------------------------------------------EESMEPSFPGGAKA------------WGQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAIAKKDKALQKVLKKTDPAILVEISEEAVTSTGLGIYRQTKRAGGRNGSATGASSAVLQPGERPEQLRQKFAHSLKSQMKSKDKALLKEIAALEEDETEQIMGNFGKGAGVLPNSWRQDPEGLNRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGVSSAAQEGRRSVPIHEKGNGKKEAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSGNRPSPTLTTEPCTDTLFQTSGRIGLGTQQRAWVEISCSPTSSQTLRGGFVARPHSAAAKISKKLRTPPRRPATACGTRVPRESTDNAVAASNVSSTNQAREHEQDHRSDEQSRDLHVQSGPGVTVLWARLCSPSSDLVYKRSVWPEAPAASRPTRRRGKPRKTSATAPVNGTTVAEGEHEWDATPGDPSTGPGPIVAGSSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRIFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRINWNRRGGRGNPRQEDDTTKRKHRRDKRHQSRISGNDDPVDMDWEKVDIARLINGSKEIEKVLDGKFFAVVTDDESPVHLGECFQEAQELVESASVLLGCPENERERY 1081
BLAST of mRNA_E-siliculosus-1a_F_contig1374.2241.1 vs. uniprot
Match: A0A835YZN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN9_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.780e-28 Identity = 91/267 (34.08%), Postives = 138/267 (51.69%), Query Frame = 1
Query: 1210 EEHDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFK--KKHGYNVHGQMLGKDGKMIVKVTPEKTEEEKARLPWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAELDGRQDELNRALTKALKARCGGETIMAFATLGQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAITKKDKALQKVLKKTDPAILVEISEEAVTSTGMGIYRQTKRAG 2004
EE T F++RMVAQRN+R F L RE+ LD ++ L+ +D + + ++ GYN+HG +R+++E+R+GK +P LGD+IEARRE + +R FT LDGR+ EL L + L+ + + G Y DGK+IL +G LH D RA Y YKA +R++AAH DIA+AI+ K + K+L+KT+ +L I+E+AV+S+ + +RQ + G
Sbjct: 121 EEASTELFLSRMVAQRNARLFSGTLDGREQQLDSAVIAALDGMTDQEYKRLLQRRGYNIHG---------------------------HRRIFEERVGKLVPRVTLGDAIEARREGLSCARQFTESLDGREAELQAHLEEGLRDVWRMDVVRP----------------RNVGGYGIDGKIILPEGEERDKRLHLDDKALARATPYVYKATQRFKAAHEDIANAISAKSLEVSKLLRKTNWKLLQSIAEQAVSSS-LAQHRQKRLTG 343 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1374.2241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1374.2241.1 >prot_E-siliculosus-1a_F_contig1374.2241.1 ID=prot_E-siliculosus-1a_F_contig1374.2241.1|Name=mRNA_E-siliculosus-1a_F_contig1374.2241.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1513bp MTALNSMARLPADGESVQSRSSGSIKTTPDVPLALAVEAAAEASTLADPKback to top mRNA from alignment at E-siliculosus-1a_F_contig1374:25852..33020+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1374.2241.1 ID=mRNA_E-siliculosus-1a_F_contig1374.2241.1|Name=mRNA_E-siliculosus-1a_F_contig1374.2241.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7169bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1374:25852..33020+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1374:25852..33020+ >mRNA_E-siliculosus-1a_F_contig1374.2241.1 ID=mRNA_E-siliculosus-1a_F_contig1374.2241.1|Name=mRNA_E-siliculosus-1a_F_contig1374.2241.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=9078bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1374:25852..33020+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |