mRNA_E-siliculosus-1a_F_contig1373.2237.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: D7FNJ6_ECTSI (Lon protease homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNJ6_ECTSI) HSP 1 Score: 483 bits (1243), Expect = 6.910e-161 Identity = 255/263 (96.96%), Postives = 256/263 (97.34%), Query Frame = 1
Query: 1 VADIRPSALPGEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADSEVIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIKEITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEVCTSWTDVK 789
VADIRPSALPGEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADSEVIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRK IKEITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDE D+K
Sbjct: 261 VADIRPSALPGEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADSEVIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKKIKEITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEDHYGLDDIK 523
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: A0A835YRA9_9STRA (Lon protease homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRA9_9STRA) HSP 1 Score: 286 bits (731), Expect = 6.510e-87 Identity = 154/258 (59.69%), Postives = 205/258 (79.46%), Query Frame = 1
Query: 19 SALPGEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGE-FDADSEVIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIKEITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEVCTSWTDVK 789
++L QLLL +R+ +VVSLGPPL+VEV+ G+ +DA S+VI+AYCQEIL+T++++V LNPLLRE ITFF++ IN+ +PF +AD AAT+++ LQAVL E N E+RLR+AL++ISKERE+ RLQ++I++QV++KMT Q+R YFL EQ+KSIKKELGLEKDDKEA+LNKFR+R + +++ K+A KA+EEELEKLSSLEKNS EFN T++YLDWLT LPWG S +NFDLK+AK+ LDE D+K
Sbjct: 106 TSLETGAQLLLSSRQRIKFSKVVSLGPPLQVEVESSLVGDPYDASSDVIKAYCQEILATIRDLVKLNPLLRENITFFTQ-TINMQDPFLVADFAATITTADGHDLQAVLEEMNVEERLRMALELISKERELSRLQKEIQKQVEEKMTLQQRNYFLMEQMKSIKKELGLEKDDKEALLNKFRERMEACEDLGKDARKAMEEELEKLSSLEKNSQEFNTTRNYLDWLTCLPWGKTSQENFDLKRAKQILDEDHYGLDDIK 362
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: A0A7S4HR69_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR69_9STRA) HSP 1 Score: 237 bits (605), Expect = 2.630e-72 Identity = 125/259 (48.26%), Postives = 187/259 (72.20%), Query Frame = 1
Query: 28 PGEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADSE-----VIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIKEITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEVCTSWTDVK 789
P +LL HRR+ ++ V ++GPP++++V HW+ +++ E IRA E+LST+++V +NPL RE + +F R I+ +P++LAD AT+++GSP++LQAVL E++ E RL AL +ISKEREV +LQQ+I +V++KM++ +R YFL EQLKSIKKELG+E+DDKEA+++K+R + K+ +I +EA I+ ELEKLS+LEKNS EFN T+SYLDWLT +PWG+ S + FD+++A+ LD D+K
Sbjct: 139 PSSASVLLYTHRRIDLQSVENVGPPIDLKVSHWDRLQYNPKGESKVDDTIRALTNEVLSTIRDVAQMNPLFREHLQYFPNR-IDPSDPYRLADFVATVTTGSPEELQAVLEEKDAELRLHKALVLISKEREVSKLQQEISAKVEEKMSDAQRKYFLNEQLKSIKKELGMEQDDKEALIDKYRKKLKDYPQIPEEAMGVIDSELEKLSTLEKNSTEFNVTRSYLDWLTAIPWGNMSDETFDIREARTILDRDHYGLDDLK 396
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: A0A7S1BLT3_9STRA (Lon protease homolog n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLT3_9STRA) HSP 1 Score: 246 bits (629), Expect = 2.990e-72 Identity = 134/254 (52.76%), Postives = 184/254 (72.44%), Query Frame = 1
Query: 31 GEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDA-DSEVIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIKEITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEVCTSWTDVK 789
G+ +LL+GHRR+++ V LGPP++V V+HW+ D S+++RA EI+S ++EV LNPL RE I +F R ++ ++P KLAD AA++++GS +LQ VL E++PE RL AL +++KEREV RLQQ+I QV+ KMT +R YFL EQLKSIKKELG+EKDDK+A+L K+R + EI +EA +AIE ELEKLS+LEKNS EFN T++YLDWLT+LPW A+ + +DL +A+E LD DVK
Sbjct: 121 GQASVLLLGHRRVTLTSVDRLGPPVDVTVEHWDRIVTDPFQSDMVRALSNEIVSMIREVATLNPLFREHIHYFPTR-VDSNDPMKLADFAASMTTGSAGELQGVLAEKDPEARLHKALTLLTKEREVSRLQQEISAQVEAKMTEAQRRYFLTEQLKSIKKELGMEKDDKDALLGKYRQKLAAFTEIPEEARRAIEAELEKLSALEKNSAEFNVTRTYLDWLTELPWDTATPERYDLARAREILDRQHYGLDDVK 373
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: A0A225UKP0_9STRA (Lon protease (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UKP0_9STRA) HSP 1 Score: 236 bits (601), Expect = 5.580e-71 Identity = 122/255 (47.84%), Postives = 185/255 (72.55%), Query Frame = 1
Query: 31 GEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADSEVIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIK--EITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEVCTSWTDVK 789
VQ+L+V RR++I ++ GPPL V + + + FD+ S++IRAY EI++T++E+V +NPL ++ + +FS+R I++HNP+KLAD AA+++S ++LQ V+ E + E RL+ AL++I+KE E+ ++QQ IK+QV++K++ +R Y L EQLK+IKKELG+EKDDK+A++ K+R+R I + +E+EL K+S LEKNS EFN T++YLDWLTQLPWG A+ +NFDL KAK+ LDE D+K
Sbjct: 7 NSVQVLMVSQRRIAIDDIRDEGPPLRVNISNLDNPPFDSKSKLIRAYSNEIVATLREIVKMNPLFKDHMQYFSQR-IDIHNPYKLADFAASVTSADGEELQQVMEEMSCEARLKKALELITKELELSKVQQTIKEQVEEKVSKNQRNYLLMEQLKAIKKELGMEKDDKDAMITKYRERLAGFAPGSIPDNVNEVVEDELNKMSMLEKNSSEFNVTRNYLDWLTQLPWGKATEENFDLAKAKQILDEDHYGLKDIK 260
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: A0A4D9CTF9_9STRA (Lon protease homolog, mitochondrial n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTF9_9STRA) HSP 1 Score: 243 bits (621), Expect = 1.270e-70 Identity = 136/263 (51.71%), Postives = 190/263 (72.24%), Query Frame = 1
Query: 1 VADIRPSALPGEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADSEVIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIKEITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEVCTSWTDVK 789
V + P + G+V +LV HRR+ I ++LGPPL V+V H +D DS +I+AY E++STV+E+V +NPL +E F++++ I++ +PF+LAD AATLS+ +LQ VL E + E+RL AL +I KE E+ ++QQ+I+QQV+ K++ ++R YFL EQLK IKKELG+EKDDKEA+L KFR+R K ++ + K A+ AI+EELEKL SLEKNS EFN T++YL+WLT LPWG S +NFDLK+AK LDE D+K
Sbjct: 210 VQNTIPLGMGGQV--VLVSHRRIKIDGSIALGPPLRVKVSHLEGRAYDPDSTLIKAYSNEVVSTVRELVKVNPLFKEHFNFYTQK-IDIVDPFRLADFAATLSTAEGKELQEVLEELDAEKRLNKALILIKKELELGKIQQEIQQQVEAKISQKQREYFLMEQLKYIKKELGMEKDDKEALLTKFRERIKTLQ-VPKLAQAAIDEELEKLESLEKNSSEFNVTRNYLEWLTSLPWGVTSEENFDLKRAKVILDEDHYGLQDIK 468
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: A0A7S4HQU0_9STRA (Hypothetical protein (Fragment) n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HQU0_9STRA) HSP 1 Score: 237 bits (605), Expect = 6.120e-70 Identity = 125/259 (48.26%), Postives = 187/259 (72.20%), Query Frame = 1
Query: 28 PGEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADSE-----VIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIKEITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEVCTSWTDVK 789
P +LL HRR+ ++ V ++GPP++++V HW+ +++ E IRA E+LST+++V +NPL RE + +F R I+ +P++LAD AT+++GSP++LQAVL E++ E RL AL +ISKEREV +LQQ+I +V++KM++ +R YFL EQLKSIKKELG+E+DDKEA+++K+R + K+ +I +EA I+ ELEKLS+LEKNS EFN T+SYLDWLT +PWG+ S + FD+++A+ LD D+K
Sbjct: 258 PSSASVLLYTHRRIDLQSVENVGPPIDLKVSHWDRLQYNPKGESKVDDTIRALTNEVLSTIRDVAQMNPLFREHLQYFPNR-IDPSDPYRLADFVATVTTGSPEELQAVLEEKDAELRLHKALVLISKEREVSKLQQEISAKVEEKMSDAQRKYFLNEQLKSIKKELGMEQDDKEALIDKYRKKLKDYPQIPEEAMGVIDSELEKLSTLEKNSTEFNVTRSYLDWLTAIPWGNMSDETFDIREARTILDRDHYGLDDLK 515
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: A0A7S2U8I2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8I2_9STRA) HSP 1 Score: 229 bits (583), Expect = 7.230e-69 Identity = 127/237 (53.59%), Postives = 177/237 (74.68%), Query Frame = 1
Query: 43 LLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDA---DS-EVIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLS-SGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIKE--ITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFD 732
LLL+GHRR+ + V +GPP++V V HW+ E+ A DS ++IRA EILST++EV LNPL R+++ FF R ++ ++P++LAD AA+++ SG+ ++LQAVL E++PE+RL AL ++ KEREV +LQQ+I +V++KMT +R YFL EQLKSIKKELG+EKDDKE ++ K+R + K + I KE + IE E+EKLS+LEKNS EFN T+SYLDWLT +PWG S +NFD
Sbjct: 237 LLLMGHRRIDLLSVDEVGPPIDVTVSHWDRLEYSAKEGDSPDMIRAITNEILSTIREVAQLNPLFRDQVQFFPTR-VDANDPYRLADFAASITTSGTSEELQAVLEERDPERRLHKALCLLVKEREVSKLQQEISAKVEEKMTASQRKYFLMEQLKSIKKELGMEKDDKETLIEKYRKKLKEFADDAIPKEVNEVIESEMEKLSTLEKNSSEFNVTRSYLDWLTGIPWGVTSEENFD 472
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: A0A7S4RFD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RFD6_9STRA) HSP 1 Score: 233 bits (595), Expect = 7.640e-69 Identity = 126/252 (50.00%), Postives = 184/252 (73.02%), Query Frame = 1
Query: 49 LVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADSEV---IRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIKE--ITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEVCTSWTDVK 789
L+ HRR+ + + S+GPP++V V HW+ +++ V IRA EILST++E+ LN L RE I+FF R I+ ++P++LAD AA++++G+P++LQAVL E++ E RL AL ++SKEREV +LQQ+I+ +V++KMT +R YFL EQLKSIKKELG+EKDDKEA++ K+R + K + I++E + I+ E+EKLS+LEKNS EFN T+SYLDWLT +PWG S +NFD++ A++ LD +VK
Sbjct: 279 LLAHRRIDLTSIDSVGPPIDVTVSHWDRLDYNFKGGVDDTIRALTNEILSTIREIATLNSLFREHISFFPTR-IDANDPYRLADFAASITTGTPEELQAVLEERDAEMRLHKALVLLSKEREVSKLQQEIQAKVEEKMTEAQRKYFLTEQLKSIKKELGMEKDDKEALIQKYRKKLKTYSKDAISQEVMETIDSEIEKLSTLEKNSSEFNVTRSYLDWLTNIPWGIFSKENFDIRDARKVLDRDHYGLDEVK 529
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Match: A0A8K1CMW1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMW1_PYTOL) HSP 1 Score: 237 bits (604), Expect = 2.020e-68 Identity = 125/255 (49.02%), Postives = 186/255 (72.94%), Query Frame = 1
Query: 31 GEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADSEVIRAYCQEILSTVQEVVVLNPLLRERITFFSERNINVHNPFKLADLAATLSSGSPDKLQAVLTEQNPEQRLRLALDIISKEREVLRLQQDIKQQVDQKMTNQKRTYFLQEQLKSIKKELGLEKDDKEAILNKFRDRRKNIK--EITKEAEKAIEEELEKLSSLEKNSPEFNGTKSYLDWLTQLPWGHASVDNFDLKKAKEGLDEVCTSWTDVK 789
VQ+L+V RR+ I V +GPPL V ++ +FD S++IRAY EI++T++E+V +NPL +E + +FS+R I++HNP+KLAD AA++++ ++LQ V+ E N E RL+ AL++I+KE E+ ++QQ IK+QV++K++ +R Y L EQLK+IKKELG+EKDDK+A++ K+R+R + I + +EEEL K+S LEKNS EFN T++YLDWLTQLPWG ++ +NFDLKKAK+ LDE +D+K
Sbjct: 209 NSVQVLMVSQRRIVIDGVHDMGPPLRVSINPLENPDFDPKSKLIRAYSNEIVATLREIVKMNPLFKEHMQYFSQR-IDIHNPYKLADFAASVTTADGEELQQVMEEMNCELRLKKALELITKELELSKVQQVIKEQVEEKVSKNQRQYLLMEQLKAIKKELGMEKDDKDAMITKYRERLDAFEPGSIPANVLEVVEEELNKMSMLEKNSSEFNVTRNYLDWLTQLPWGKSTEENFDLKKAKQILDEDHYGLSDIK 462 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1373.2237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1373.2237.1 >prot_E-siliculosus-1a_F_contig1373.2237.1 ID=prot_E-siliculosus-1a_F_contig1373.2237.1|Name=mRNA_E-siliculosus-1a_F_contig1373.2237.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=263bp VADIRPSALPGEVQLLLVGHRRLSIKEVVSLGPPLEVEVDHWNTGEFDADback to top mRNA from alignment at E-siliculosus-1a_F_contig1373:30692..32983+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1373.2237.1 ID=mRNA_E-siliculosus-1a_F_contig1373.2237.1|Name=mRNA_E-siliculosus-1a_F_contig1373.2237.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2292bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1373:30692..32983+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1373:30692..32983+ >mRNA_E-siliculosus-1a_F_contig1373.2237.1 ID=mRNA_E-siliculosus-1a_F_contig1373.2237.1|Name=mRNA_E-siliculosus-1a_F_contig1373.2237.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1578bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1373:30692..32983+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |