mRNA_E-siliculosus-1a_F_contig1372.2224.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1372.2224.1 vs. uniprot
Match: A0A6H5K2H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H5_9PHAE) HSP 1 Score: 1293 bits (3346), Expect = 0.000e+0 Identity = 918/1140 (80.53%), Postives = 931/1140 (81.67%), Query Frame = 1
Query: 91 QVEAFWEDSFTGIAYCRARWLLRASEIPREDVSEDEVLLTTVTDNIEAAHILRLAPVAVASSPHAEAKREPEAKPEPSAGTRQGLRPKPRSPRLGKVLRGKRAREEEEATATLRLARAYDPFSTEASILPTDHPVVVQLRARERAGGGGRLKAGGCLSDAHGCSRKSGCGRAGAQRKGLDGARLVVAAPPTQAFGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-EALIKAEEPTAATKPGAPEAASDTSSLDRTAKRPARPRRLAMPPADSATGLGGXXXARVEEAGGRKCQQQLRGGLLIRAAHAGEESEDGLDSPKLEQYPQKETNVGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKRRMAWAVMAGGKPEDEEKLRVGCAGGGVSEVSRSELQPTQVEELAMQALMLEDAGNKKGKGSLMDNARTALGLLDNTMVDDSGPLATWTGPQIEALSKALEAHFDADRFTRSRGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSERRSASLRGPPAPRPSPPPNLRHRPSLRCPTRLQASSFEDSGDSDDGDIAVGSYQLRTRRSSRNDRXXXXXXXXXXXXXXXXXXXXXXKAVGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASSRGRVGSRPPAGWAQGGRGGAAAAPAEAFGGG---EEGRGCKRSFDDHRAPPGDARGGAKEQRAPQRPRWQQEVPRQSIPADAVVVEVSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXSAADTNVSVSNGRGMNEARGPAFVGGSAGDVMAGQRRHGHTGYPHEGGSSAFARRVDERXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------GFEGNQHHQRNSGYXXXXXXXXXXXXXXXSNNLDGREPRFQPADRHSRHLAAASSGVRASEMGAPAALGRNVSASMRGPRQQPGPALDGSWR 3405
QVEAFWEDSFTGIAYCRARWLLRASEIPREDVSEDEVLLTTVTDNIEAAHILRLAPVAVASSPH EAKRE EAK EPSAGTR+GLRP PRSP L KVLRGKRARE E ATATLRLARAYDPFSTE SILPTDHPVVVQLRARERAGG GRLKAGGCL DAHGC R S CGRAGAQRKGL GARLVVA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EALIKAEEPTAATKPGA EAASDT S DRTAKRPARPRRLAMPPADSATGLG RVEEA G KCQQQLRGGLLIRAAH GEES DGLDSPKLEQYPQKETNVG DHQADIPSMLLTEAERAADKAAMEET EMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKR++AWAVMAGGKPED+EKL V CAGGGVSEVSRSELQPTQVEELAMQALM EDAGNKKGKGSL+DNARTALGLLDNTMVDDSGPLATWTGPQIEALSKALEA+FD DRFTRSRGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSERRSASLRGPP PRPSPPPNLRHRPSLRCPTRLQASSFEDSGDSDDGDIAVGSYQLRTRRSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TASSRG+VGSRPPAGWAQGGR EEGRGCKRSFDDHRAPP D RGGAKEQRAPQRPRWQQEVPRQS+PADAV+VEVSDD XXXXXXXXXXXXXXXXXXXXXXXSAADTNV VSNGRG+ EARGPAFVGG+AGDVMAGQRRHGHTGYPHEGG+ AFARRVDER GFEGNQHHQRNSG XXXXXXXXXXXXXSNNL GREPRFQPADR+SRHLAAASSGVRA EMGAP ALGRNVS SMRGP QQPGP LDGSWR
Sbjct: 19 QVEAFWEDSFTGIAYCRARWLLRASEIPREDVSEDEVLLTTVTDNIEAAHILRLAPVAVASSPHGEAKRELEAKSEPSAGTRKGLRPNPRSPTLCKVLRGKRAREGE-ATATLRLARAYDPFSTEVSILPTDHPVVVQLRARERAGGSGRLKAGGCLRDAHGCPRNSDCGRAGAQRKGLGGARLVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEALIKAEEPTAATKPGAHEAASDTPSWDRTAKRPARPRRLAMPPADSATGLGDGGSVRVEEARGTKCQQQLRGGLLIRAAHPGEESADGLDSPKLEQYPQKETNVGIDHQADIPSMLLTEAERAADKAAMEETLEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKRKIAWAVMAGGKPEDKEKLLVTCAGGGVSEVSRSELQPTQVEELAMQALMREDAGNKKGKGSLIDNARTALGLLDNTMVDDSGPLATWTGPQIEALSKALEANFDPDRFTRSRGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSERRSASLRGPPVPRPSPPPNLRHRPSLRCPTRLQASSFEDSGDSDDGDIAVGSYQLRTRRSSXX----------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSRGRGRDHRRTSAPEEEEDGTASSRGQVGSRPPAGWAQGGRXXXXXXXXXXXXXXXXXEEGRGCKRSFDDHRAPPDDVRGGAKEQRAPQRPRWQQEVPRQSVPADAVIVEVSDDEEPAXXXXXXXXXXXXXXXXXXXXXXXSAADTNVRVSNGRGLIEARGPAFVGGTAGDVMAGQRRHGHTGYPHEGGAPAFARRVDERRKDSRVVADQRQHHHGRRYSDYPYDGYTATXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFEGNQHHQRNSGNGLXXXXXXXXXXXXXSNNLGGREPRFQPADRYSRHLAAASSGVRALEMGAPTALGRNVSTSMRGPPQQPGPVLDGSWR 1111
BLAST of mRNA_E-siliculosus-1a_F_contig1372.2224.1 vs. uniprot
Match: D7G9E6_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E6_ECTSI) HSP 1 Score: 1067 bits (2760), Expect = 0.000e+0 Identity = 629/844 (74.53%), Postives = 633/844 (75.00%), Query Frame = 1
Query: 250 LAPVAVASSPHAEAKREPEAKPEPSAGTRQGLRPKPRSPRLGKVLRGKRAREEEEATATLRLARAYDPFSTEASILPTDHPVVVQLRARERAGGGGRLKAGGCLSDAHGCSRKSGCGRAGAQRKGLDGARLVVAAPPTQAFGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREALIKAEEPTAATKPGAPEAASDTSSLDRTAKRPARPRRLAMPPADSATGLGGXXXARVEEAGGRKCQQQLRGGLLIRAAHAGEESEDGLDSPKLEQYPQKETNVGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKRRMAWAVMAGGKPEDEEKLRVGCAGGGVSEVSRSELQPTQVEELAMQALMLEDAGNKKGKGSLMDNARTALGLLDNTMVDDSGPLATWTGPQIEALSKALEAHFDADRFTRSRGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSERRSASLRGPPAPRPSPPPNLRHRPSLRCPTRLQASSFEDSGDSDDGDIAVGSYQLRTRRSSRNDRXXXXXXXXXXXXXXXXXXXXXXKAVGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASSRGRVGSRPPAGWAQGGRGGAAAAPAEAFGGGEEGRGCKRSFDDHRAPPGDARGGAKEQRAPQRPRWQQEVPRQSIPADAVVVEV 2781
LAPVAVASSPHAEAKREPEAKPEPSAGTRQGLRPKPRSPRLGKVLRGKR REEE ATATLRLARAYDPFS EAS+LPTDHPVVVQLRARERAGG GRLKAGGCLSDAHGCSRKSGCGRAGAQRKGLDGA P T+ XXXXXXXXXXXXX EALIKAEEPTAATKPGAPEAASDTSSLDRTAKRPARPRRLAMPPADSATGLGG ARVEEAGGRKCQQQLR GLLIRAAHAGEESEDGLDSPKLEQYPQKETNVGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKR+MAWAVMAGGKPEDEEKLRVGCAGGGVSEVSR ELQPTQVEELAMQALM EDAGNKKGKGSLMDN RTALGLLDNTMVDDSGPLATWTGPQIEALSKALE HFDADRFTRSRGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSERRSASLRGPPAPRPSPPPNLRHRPSLRCPTRLQASSFEDSGDSDDGDIAVGSYQLRTRRSSRNDR PPAGWAQGGRGG AAA AEAFGGGEEGRGCKRSFDDHRAPPGDARGGAKEQR PQRPRWQQEVPRQSIPADAVVVE+
Sbjct: 2 LAPVAVASSPHAEAKREPEAKPEPSAGTRQGLRPKPRSPRLGKVLRGKRDREEE-ATATLRLARAYDPFSAEASVLPTDHPVVVQLRARERAGGSGRLKAGGCLSDAHGCSRKSGCGRAGAQRKGLDGASY----PRTRR----------------------------------------------------------------------------GRXXXXXXXXXXXXXGEALIKAEEPTAATKPGAPEAASDTSSLDRTAKRPARPRRLAMPPADSATGLGGGGGARVEEAGGRKCQQQLRSGLLIRAAHAGEESEDGLDSPKLEQYPQKETNVGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKRKMAWAVMAGGKPEDEEKLRVGCAGGGVSEVSRRELQPTQVEELAMQALMQEDAGNKKGKGSLMDNTRTALGLLDNTMVDDSGPLATWTGPQIEALSKALETHFDADRFTRSRGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEAQAKVRSERRSASLRGPPAPRPSPPPNLRHRPSLRCPTRLQASSFEDSGDSDDGDIAVGSYQLRTRRSSRNDR-------------------------------------------------------------------------------------------------------------PPAGWAQGGRGGVAAAAAEAFGGGEEGRGCKRSFDDHRAPPGDARGGAKEQRVPQRPRWQQEVPRQSIPADAVVVEL 655
BLAST of mRNA_E-siliculosus-1a_F_contig1372.2224.1 vs. uniprot
Match: D7G9E3_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E3_ECTSI) HSP 1 Score: 118 bits (295), Expect = 4.260e-23 Identity = 97/279 (34.77%), Postives = 141/279 (50.54%), Query Frame = 1
Query: 1237 YPQKETNVGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRR----KRRMA-----WAVMAGGKPEDEEK--LRVGCAGGGVSEVSRSELQPTQVEELAMQALMLEDAGNKKGKGSLMDNARTALGLLDNTMVDDSGP--LATWTGPQIEALSKALEAHFDADRFTRS---RGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVM-GSAEAQAKVR 2022
YP + T VG+ +QADIP LL ER +AA A G VW S+RDW R L YLE A++A K+ PGV + + GD+ K +A WAV AG + RVGC+ +EV S +Q Q EE A+ AL+ K + +L D+ AL +L + D++ P + WT Q+ L +AL ++ DR G + R++ D+ + V GK+P+QVL F+YRY+AT + LT+V+ G A+A+ R
Sbjct: 292 YPPQRTLVGDGYQADIPD-LLPAGER---QAAAPTAAGTGAKMVWRSIRDWDPHSRGMLSSYLEAAKKAVQAKQSRPGVAIHVRLGGEGDKGGTPGDKSSVASSYAVWAVTAGRNAGSNARGVARVGCSEMAQTEVPMSAIQRVQCEEEALAALV-------KARCTL-DDFDPALKIL---VGDEASPESIQPWTLQQVRTLEQALAKDYNRDRRLHGWAREGMDMDREDFIDLADVSKQVSGKSPTQVLCFFYRYLATAEPLTDVVYGEEAAEARKR 555
BLAST of mRNA_E-siliculosus-1a_F_contig1372.2224.1 vs. uniprot
Match: A0A6H5JLS8_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS8_9PHAE) HSP 1 Score: 117 bits (292), Expect = 1.080e-22 Identity = 96/296 (32.43%), Postives = 142/296 (47.97%), Query Frame = 1
Query: 1141 KCQQQLRGGLLIRAAHAGEESEDGLDSPKLEQYPQKETNVGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKRRMAWAVMAGGKPEDEEKLRVGCAGGGVSEVSRSELQPTQVEELAMQALMLEDA--GNKKGKGSLMDNARTALGLLDNTMVDDSGPLATWTGPQIEALSKALEAHFDADRFTRSRGHERH-----RDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEA 2007
KC++ + GG R + + + DG D P + PQ+ VG+D+QADIP +L E + K A A G VW S+R+W R L YL A+ K+ SPGV + + + G + A G + VGC GV V+ SE+ T+V A+Q + E+ G +D+ + AL + D ++ P W Q+ L +ALE HFD + RS G R R++ D+ ++ V GKTP+QVLSF+YRY+A LT+V+ EA
Sbjct: 472 KCRRSI-GGTRTRG-RSTKAAVDGADKPDCD--PQQ-ILVGDDYQADIPDLLSAEDRK---KEAGHPAARTGAKMVWRSIRNWDPQSRHMLSTYLHAAKDVVKAKQASPGVAVHVRLGDAGSKNNGNVEAATTSVAGSYAVWA-ITVGCHSAGVIRVACSEIAQTKVPIPAIQRVQSEEQALGALVKARCTLDDFKPALKVFDQASMESVDP---WKLSQVRNLKQALEEHFDPN--PRSHGWAREGMDLEREDFIDLANVSKQVPGKTPTQVLSFFYRYLAAAKPLTDVVYGKEA 753
BLAST of mRNA_E-siliculosus-1a_F_contig1372.2224.1 vs. uniprot
Match: A0A6H5JX23_9PHAE (BAH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX23_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.880e-22 Identity = 95/279 (34.05%), Postives = 139/279 (49.82%), Query Frame = 1
Query: 1237 YPQKETNVGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRR---------RKRRMAWAVMAGGKPEDEEK--LRVGCAGGGVSEVSRSELQPTQVEELAMQALMLEDAGNKKGKGSLMDNARTALGLLDNTMVDDSGP--LATWTGPQIEALSKALEAHFDADRFTRS---RGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVM-GSAEAQAKVR 2022
+P + T VG +QADIP +L E ER KAA +A G VW S+RDW R L YLE A++A K+ PGV + + GD+ WAV AG + RVGC+ +EV S +Q Q EE A+ AL+ K + +L D+ AL +L + D++ P + WT Q+ L +AL + DR G + R++ D+ +I + GK+P+QVL F+YRY+AT + LT+V+ G A+A+ R
Sbjct: 494 FPPRRTLVGNGYQADIPDLLPAE-ER---KAAAPTSAGTGAKMVWRSIRDWDPHSRGMLSSYLEAAKKAVQAKQSRPGVVVHVRLGGKGDKGGTPGDESSVASSYAVWAVTAGRDAGSNARGVARVGCSEMAQTEVPISAIQRVQCEEEALAALV-------KARCTL-DDFDPALKIL---VGDEASPESIQPWTLQQVRTLEQALAKDCNRDRRLHGWAREGMDIDREDLIDLADVIKQIPGKSPTQVLCFFYRYLATAEPLTDVVYGEEAAEARKR 757
BLAST of mRNA_E-siliculosus-1a_F_contig1372.2224.1 vs. uniprot
Match: A0A6H5KVI2_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI2_9PHAE) HSP 1 Score: 109 bits (273), Expect = 1.910e-20 Identity = 85/263 (32.32%), Postives = 126/263 (47.91%), Query Frame = 1
Query: 1258 VGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRRRKRR----------MAWAVMAGGKPEDEEKLRVGCAGGGVSEVSRSELQPTQVEELAMQALMLEDAGNKKGKGSLMDNARTALGLLDNTMVDDSGPLATWTGPQIEALSKALEAHFDADRFTRS---RGHERHRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVMGSAEA 2007
VG+D+QADIP++L + + K A A G VW S+R+W R+ L YL A +K+ PGV + + + G + + WA+MAG +RV C+ + V S +Q Q EE A+ AL+ K + +L D+ R AL +LD +D P W Q+ L + LE F DR G + +++ D+ ++ V GKTP+QVLSFYYRY+A LT+V+ EA
Sbjct: 504 VGDDYQADIPALLSAQERK---KEAGHPAAGTGAKMVWRSIRNWDPQSRQMLSTYLHAATDVLQKKQGFPGVAVHVRLGDRGSAAKGDKGVTTSVANSYAVWAIMAG--RHSAGAVRVACSEMAQTTVPISAVQRVQSEEEALAALV-------KARCTL-DDFRPALKVLDQASLDSVAP---WALSQVRTLEQVLEKEFKWDRRLHGWAREGMDLEQEDFIDLANVCKQVRGKTPAQVLSFYYRYLAHAKPLTDVVYGKEA 750
BLAST of mRNA_E-siliculosus-1a_F_contig1372.2224.1 vs. uniprot
Match: A0A6H5K0T4_9PHAE (BAH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T4_9PHAE) HSP 1 Score: 104 bits (259), Expect = 8.290e-19 Identity = 113/379 (29.82%), Postives = 158/379 (41.69%), Query Frame = 1
Query: 1045 PARPRRLAMPPADSAT------------------GLGGXXXARVEEAGGRKCQQQLRGGLLIRAAHA----------------GEESEDGLDSPKLEQYPQKETNVGEDHQADIPSMLLTEAERAADKAAMEETAEMGGTAVWSSVRDWTASERERLDGYLEEARRAADEKRMSPGVPALISINNGGDRR------------RKRRMAWAVMAGGKPEDEEKLRVGCAGGGVSEVSRSELQPTQVEELAMQALMLEDAGNKKGKGSLMDNARTALGLL-DNTMVDDSGPLATWTGPQIEALSKALEAHFDADRFTRSRGHER-----HRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVM-GSAEAQAKVR 2022
P RPRRLA+PPA++A G G R AG L G A G+ ++P P + T VGEDHQ DIP +L E A A E G VW SVRDW R L GYL+ A K+ PGV I + GG WA+ G + +RV C+ +E+ S +Q + EE A++AL+ + ++DN AL +L D+T +S + W+ Q+ L AL+ FD + RS+G R R++ D+ + V GKTP+QVL FY+RY+A LT+V+ G A+A+ R
Sbjct: 388 PPRPRRLAIPPANTAGAAAKCAGGGAVPHAADVGGSPGSVRTRRSAAGAAGAPPSLMGSSTAPTAELILSGKRKRTPTAKRMEGDNEPCEAEAPDF--IPPRRTLVGEDHQVDIPDLLPAEDRSKAAAAGRAEGT--GAEMVWQSVRDWDPHSRGMLAGYLQAANTMVRSKQARPGVA--IHVRLGGKNEDGXXXXXXXXXXXXSYAVWALTTGVSSASGD-VRVACSEIAQTEIPASAIQ--RCEEEALEALVKTNC--------VLDNFEPALKMLADSTTSPES--VQPWSLDQVRTLEAALDKDFDVNG--RSQGWARPGIDMDREDFIDIAKVSKEVPGKTPAQVLQFYFRYLAAARPLTDVVYGPEAAEARKR 745
BLAST of mRNA_E-siliculosus-1a_F_contig1372.2224.1 vs. uniprot
Match: D7G9E4_ECTSI (BAH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E4_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 2.270e-5 Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = 1
Query: 1642 EELAMQALMLEDAGNKKGKGSLMDNARTALGLL-DNTMVDDSGPLATWTGPQIEALSKALEAHFDADRFTRSRGHER-----HRDEHTDVTSLIASVDGKTPSQVLSFYYRYMATGDALTEVM-GSAEAQAKVR 2022
EE A++AL+ + ++DN AL +L D+T +S L W+ Q+ L AL+ FD + RS+G R R++ D+ + V GKTP+QVL FY+RY+A LT+V+ G A+A+ R
Sbjct: 518 EEAALEALVKTNC--------VLDNFEPALKMLADSTTSPES--LQPWSLDQVRTLEAALDKDFDVNG--RSQGWARPGIDMDREDCIDIAKVSKEVPGKTPAQVLQFYFRYLAAARPLTDVVYGPEAAEARKR 639 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1372.2224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1372.2224.1 >prot_E-siliculosus-1a_F_contig1372.2224.1 ID=prot_E-siliculosus-1a_F_contig1372.2224.1|Name=mRNA_E-siliculosus-1a_F_contig1372.2224.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1135bp QQSRTTISLNDVVEVRAAKDIAVGLSPFLAQVEAFWEDSFTGIAYCRARWback to top mRNA from alignment at E-siliculosus-1a_F_contig1372:2716..11410- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1372.2224.1 ID=mRNA_E-siliculosus-1a_F_contig1372.2224.1|Name=mRNA_E-siliculosus-1a_F_contig1372.2224.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8695bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1372:2716..11410- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1372:2716..11410- >mRNA_E-siliculosus-1a_F_contig1372.2224.1 ID=mRNA_E-siliculosus-1a_F_contig1372.2224.1|Name=mRNA_E-siliculosus-1a_F_contig1372.2224.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6810bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1372:2716..11410- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |