mRNA_E-siliculosus-1a_F_contig13704.2218.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig13704.2218.1
Unique NamemRNA_E-siliculosus-1a_F_contig13704.2218.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: A0A0D5LZ89_9GAMM (ABC-type transporter, integral membrane subunit n=38 Tax=root TaxID=1 RepID=A0A0D5LZ89_9GAMM)

HSP 1 Score: 736 bits (1899), Expect = 4.780e-264
Identity = 395/416 (94.95%), Postives = 406/416 (97.60%), Query Frame = 1
Query:    1 ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            ITLTNVRGK+WLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLP+ELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGY+VLPTLIYQRMA+FGTGVLAEMAALSLLIGLLALAGVALQQ LM RSRFGLGGHSGRSHDFTLG WR+L TATL GILL+ILVAPLLALI+SSLVPA+GVPLN +TATLNAY EVVGRQGATWRAV NSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIF+AYLARFLVVCVKPVA SLAQLDPSLEEAAQL+GAGPWRRLG IILPLVAPALFAGGLLVFLLAVNEL
Sbjct:   97 ITLTNVRGKAWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPQELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYYVLPTLIYQRMANFGTGVLAEMAALSLLIGLLALAGVALQQQLMNRSRFGLGGHSGRSHDFTLGSWRSLVTATLVGILLIILVAPLLALIISSLVPAMGVPLNAETATLNAYAEVVGRQGATWRAVNNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFIAYLARFLVVCVKPVAASLAQLDPSLEEAAQLAGAGPWRRLGSIILPLVAPALFAGGLLVFLLAVNEL 512          
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: A0A060B4T2_9GAMM (ABC transporter permease n=48 Tax=Halomonadaceae TaxID=28256 RepID=A0A060B4T2_9GAMM)

HSP 1 Score: 682 bits (1760), Expect = 4.620e-243
Identity = 365/416 (87.74%), Postives = 392/416 (94.23%), Query Frame = 1
Query:    1 ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            ITLT++RGK+WLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSL+SLPRELIEAARISGA+QTQVWG IILPVTR GLIAG AMAFISSLGNFGIPAMLGIPAGY+VLPTLIYQRMASFGTGVLAEMAALSLLIG+LALAGVALQQ+ M RSRFGLGGHSGRSHDFTLGR+R   T  L G+LL+ILVAPL AL+VSSLVPA+GVPL+ D+ TLNAY EV+GRQGATWRAVRNSLWLAG AA+VLML SLPLAYRLQRLP R + + LSAIE+PYALPGVVLAIACILLFVRPLP+INVALYGTLGLIFVAYLARFLVVC+KPV+ SLAQLDPSLEEAAQL+GAGPWRRL  I+LPL+AP+LFAGGLLVFLLAVNEL
Sbjct:   87 ITLTDIRGKAWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLISLPRELIEAARISGARQTQVWGQIILPVTRHGLIAGAAMAFISSLGNFGIPAMLGIPAGYYVLPTLIYQRMASFGTGVLAEMAALSLLIGVLALAGVALQQYWMNRSRFGLGGHSGRSHDFTLGRFRPAVTTALVGVLLVILVAPLAALVVSSLVPAMGVPLSFDSVTLNAYHEVIGRQGATWRAVRNSLWLAGGAALVLMLCSLPLAYRLQRLPPRLKQLTLSAIELPYALPGVVLAIACILLFVRPLPLINVALYGTLGLIFVAYLARFLVVCLKPVSASLAQLDPSLEEAAQLAGAGPWRRLTTIVLPLIAPSLFAGGLLVFLLAVNEL 502          
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: A0A1G9AC62_9GAMM (Iron(III) transport system permease protein n=20 Tax=Halomonas TaxID=2745 RepID=A0A1G9AC62_9GAMM)

HSP 1 Score: 646 bits (1667), Expect = 6.330e-229
Identity = 344/416 (82.69%), Postives = 372/416 (89.42%), Query Frame = 1
Query:    1 ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            ITLT++RGK WLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIG+APPLGSPQPL+SA+GIALLLGIQSAPLVFLALRTSLLSLPREL+EAARISGA QTQVWG I+LP+TRSGLIAGGAMAFIS LGNFGIPAMLGIPAGY+VLPTLIYQRMASFGTGVLAEMA+LSLLIG LALAGVALQQ  M RSRFGL GH GR+HDF LGRWR   TA L              L+VSSLVPA+GVPL  +T TLNAY EV+ RQGATWRAVRNSLWLAG AA+VLML SLPLAYR+QRLP RW+ + LSAIE+PYALPGVVLA+ACILLFVRP+P+I VALYGTLGLIF+AYLARFLVVC KPVA  L+QLDPSLEEAAQL+GAGPWRRL GI+LPLVAPALFAGGLLVFL+AVNEL
Sbjct:   87 ITLTDIRGKPWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGLAPPLGSPQPLHSAQGIALLLGIQSAPLVFLALRTSLLSLPRELVEAARISGASQTQVWGQIVLPLTRSGLIAGGAMAFISGLGNFGIPAMLGIPAGYYVLPTLIYQRMASFGTGVLAEMASLSLLIGALALAGVALQQAWMKRSRFGLVGHGGRAHDFALGRWRGGVTALLVAXXXXXXXXXXXXLVVSSLVPAMGVPLTWETLTLNAYHEVIARQGATWRAVRNSLWLAGGAALVLMLCSLPLAYRMQRLPRRWQSLALSAIELPYALPGVVLAVACILLFVRPIPLIGVALYGTLGLIFIAYLARFLVVCFKPVAAGLSQLDPSLEEAAQLAGAGPWRRLSGIVLPLVAPALFAGGLLVFLMAVNEL 502          
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: A0A2N7U1Q2_9GAMM (ABC transporter permease n=1 Tax=Halomonas endophytica TaxID=2033802 RepID=A0A2N7U1Q2_9GAMM)

HSP 1 Score: 643 bits (1658), Expect = 1.480e-227
Identity = 347/416 (83.41%), Postives = 374/416 (89.90%), Query Frame = 1
Query:    1 ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            ITLT+VRGK WLVFCFMLPMMIPPQVTALSWLQL GPASPLL S+G+AP LGSPQPLYSA GIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGA Q QVWGH+ILP+TRSGLI GGAMAFISSLGNFGIPAMLGIPAGY VLPTLIYQRMASFGTGVLAEMAALS+LIGLLALAGVALQQ L GRSRFGL GHSGR HDF LGRWR    A L  +L +ILVAPL AL+VSSLVPA+GVPL  +T +L A+ E++GRQG T RA+RNSL LAG AA++LM LSLPLAY LQRLP RW+G+ LSAIE+PYALPGVVLA+ACILLFVRPLPI+ V LYGTLGLIFVAYLARFLVVC+KPV  SLAQLDPSLEEAAQL+GAGPWRRL GII PL+APALFAGG+LVFLLAVNEL
Sbjct:   87 ITLTDVRGKPWLVFCFMLPMMIPPQVTALSWLQLSGPASPLLNSLGIAPALGSPQPLYSAGGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGASQAQVWGHMILPITRSGLIVGGAMAFISSLGNFGIPAMLGIPAGYLVLPTLIYQRMASFGTGVLAEMAALSMLIGLLALAGVALQQFLSGRSRFGLVGHSGRPHDFALGRWRGGVEAVLVTMLAVILVAPLAALVVSSLVPAMGVPLTPETVSLEAFREMLGRQGVTRRAMRNSLVLAGGAALMLMALSLPLAYHLQRLPRRWQGLTLSAIEVPYALPGVVLAVACILLFVRPLPIVQVTLYGTLGLIFVAYLARFLVVCLKPVVASLAQLDPSLEEAAQLAGAGPWRRLAGIIFPLMAPALFAGGILVFLLAVNEL 502          
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: UPI001CC688CC (iron ABC transporter permease n=1 Tax=Halomonas aquamarina TaxID=77097 RepID=UPI001CC688CC)

HSP 1 Score: 640 bits (1651), Expect = 1.770e-226
Identity = 343/416 (82.45%), Postives = 383/416 (92.07%), Query Frame = 1
Query:    1 ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            ITLT++R K+ LVFCFMLPMMIPPQVTAL+WLQLFGPASP+LKS+G+AP LGSPQPLYSAEGIALLLGIQ+APLVFLALRTSLLSLPREL+EAARISGA+Q+QVWGHI+LPVTRSGLIAG AMAFISSLGNFGIPAMLGIPAGY+VLPTLIYQRMASFGTGVL EMAALS+LIG +ALAGVALQQ LMGRSRFGL GHSGR+HDF+LGR++   T  L G+LL+ILVAPL ALIVSSLVPA+GVPL+  TATL AY E++ RQGATWRAV NS+ LAG A+++LM  SLPLAYRLQRLP R + + LSA+E+PYALPGVVLAIACILLFVRP+PII+VALYGTLGLIF+AYLARFLVVC+KPVA SL QLD SLEEAAQL+GAGPW+RLG I+LPLVAPALFAGGLLVFLLAVNEL
Sbjct:   88 ITLTDIRAKAALVFCFMLPMMIPPQVTALAWLQLFGPASPILKSLGIAPALGSPQPLYSAEGIALLLGIQAAPLVFLALRTSLLSLPRELVEAARISGARQSQVWGHIVLPVTRSGLIAGAAMAFISSLGNFGIPAMLGIPAGYYVLPTLIYQRMASFGTGVLPEMAALSVLIGAVALAGVALQQRLMGRSRFGLTGHSGRAHDFSLGRFKLPVTMLLVGVLLVILVAPLAALIVSSLVPAMGVPLDATTATLGAYVEILSRQGATWRAVSNSVTLAGGASLLLMAASLPLAYRLQRLPPRLQSLSLSAVELPYALPGVVLAIACILLFVRPVPIIDVALYGTLGLIFIAYLARFLVVCLKPVAASLGQLDASLEEAAQLAGAGPWKRLGTIVLPLVAPALFAGGLLVFLLAVNEL 503          
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: A0A6M4FMG8_9GAMM (Iron ABC transporter permease n=2 Tax=Halomonas TaxID=2745 RepID=A0A6M4FMG8_9GAMM)

HSP 1 Score: 640 bits (1652), Expect = 2.900e-226
Identity = 342/416 (82.21%), Postives = 376/416 (90.38%), Query Frame = 1
Query:    1 ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            ITLT+VRGKSWLVFCFMLPMMIPPQ+TALSWLQLFGPASPLL S+G+AP LGSPQPLYSA+GI +LLGIQSAPLVFLALRTSLLSLPREL+EAARISGA   QVW  +ILP+ RSGLIAGGAMAFISSLGNFGIPAMLGIPAGY+VLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHL+GRSRFGL GHSGR H F LGRWR    A L  +L +ILVAPL AL VSSLVPA+GVPL  ++A+L A+ E++GRQG T RA+RNSLWLAG AA+VLM L LPLAY LQRLP RW+G+VLS IE+PYALPGVVLAIACILLFVRPLP+++V LYGTLGLIF+AYLARFLVVC+KPVA SLAQLDPSLEEAAQL+GAGPWRRL  I+LPL+APALFAG +LVFLLAVNEL
Sbjct:  112 ITLTDVRGKSWLVFCFMLPMMIPPQITALSWLQLFGPASPLLNSLGIAPALGSPQPLYSAQGIGVLLGIQSAPLVFLALRTSLLSLPRELVEAARISGAVPIQVWWQMILPICRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYYVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLLGRSRFGLVGHSGRPHGFVLGRWRGGVEALLMAVLAVILVAPLAALAVSSLVPAMGVPLTLESASLGAFHEMLGRQGVTRRAMRNSLWLAGGAALVLMALCLPLAYHLQRLPRRWQGMVLSTIEVPYALPGVVLAIACILLFVRPLPLVHVTLYGTLGLIFIAYLARFLVVCLKPVAASLAQLDPSLEEAAQLAGAGPWRRLANIVLPLMAPALFAGAMLVFLLAVNEL 527          
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: A0A3T1DY12_9GAMM (Uncharacterized protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DY12_9GAMM)

HSP 1 Score: 644 bits (1660), Expect = 2.960e-225
Identity = 348/370 (94.05%), Postives = 358/370 (96.76%), Query Frame = 1
Query:  139 MAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            MAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSG+IAGGAMAFISSLGNFGIPAMLGIPAGY+VLPTLIYQRMA+FGTGVLAEMAALSLLIGLLALAGVALQQ LM RSRFGLGGHSGRSHDFTLGRWR   TATL GILL+ILVAPLLAL++SSLVPA+GVPLN +T TLNAY EVVGRQGATWRAV NSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIF+AYLARFLVVCVKPVA SLAQLDPSLEEAAQL+GAGPWRRLG IILPLVAPALFAGGLLVFLLAVNEL
Sbjct:    1 MAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGMIAGGAMAFISSLGNFGIPAMLGIPAGYYVLPTLIYQRMANFGTGVLAEMAALSLLIGLLALAGVALQQQLMNRSRFGLGGHSGRSHDFTLGRWRAPVTATLIGILLIILVAPLLALVISSLVPAMGVPLNAETVTLNAYAEVVGRQGATWRAVNNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFIAYLARFLVVCVKPVAASLAQLDPSLEEAAQLAGAGPWRRLGSIILPLVAPALFAGGLLVFLLAVNEL 370          
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: UPI001D0A071A (iron ABC transporter permease n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0A071A)

HSP 1 Score: 620 bits (1598), Expect = 2.000e-218
Identity = 334/416 (80.29%), Postives = 370/416 (88.94%), Query Frame = 1
Query:    1 ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            ITLT++R K+  VFCFMLPMMIPPQVTAL+WLQLFGPASPLLKS+G AP LGSPQPLYSAEGIALLLGIQ+APLVFLALRTSLLSLPREL+EAARISGA+Q+QVWGHIILPVTR GL+AG AMAFISSLGNFGIPAMLGIPAG +VLPTLIYQRMASFGTGVL EMA+LSLLIG++AL GVALQQ  + RSRFGL GHSGR+HDFTLGR +   TA LA +LL         L+VSSLVPA+GVPLNT TATL+A+ EV+ RQGATWRAV NSLWLAG A++VLM  SLPLAYRLQRLP R + + L A+E+PYALPGVVLAIACILLFVRPLP+I+ ALYGTL LIF+AYLARFLVVC+KPVA SLAQLDPSLEEAAQL+GAGPWRR+  I+LPLVAPALFAGGLLVFLLAVNEL
Sbjct:   88 ITLTDLRAKAAWVFCFMLPMMIPPQVTALAWLQLFGPASPLLKSLGFAPALGSPQPLYSAEGIALLLGIQAAPLVFLALRTSLLSLPRELVEAARISGARQSQVWGHIILPVTRGGLVAGAAMAFISSLGNFGIPAMLGIPAGVYVLPTLIYQRMASFGTGVLPEMASLSLLIGVIALIGVALQQRALSRSRFGLTGHSGRAHDFTLGRLQVPVTALLAAVLLAXXXXXXXXLVVSSLVPAMGVPLNTTTATLSAFEEVLSRQGATWRAVNNSLWLAGGASLVLMAASLPLAYRLQRLPPRLQNLALGAVELPYALPGVVLAIACILLFVRPLPLIDEALYGTLTLIFIAYLARFLVVCLKPVAASLAQLDPSLEEAAQLAGAGPWRRMATIVLPLVAPALFAGGLLVFLLAVNEL 503          
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: A0A7V7KGX6_9GAMM (Iron ABC transporter permease n=2 Tax=Halomonas TaxID=2745 RepID=A0A7V7KGX6_9GAMM)

HSP 1 Score: 610 bits (1572), Expect = 9.140e-215
Identity = 324/416 (77.88%), Postives = 373/416 (89.66%), Query Frame = 1
Query:    1 ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            ITLT+VRGK  L+FCFMLPMMIPPQVTALSWLQLFGPASPLL S+ +AP LG+PQPL+S EGIALLLGIQSAPLVFLALRTSL++LPREL+EAARISGA+  QVW H +LP+TR GL+AGGAMAF+S+LGNFGIPAMLGIPAGY+VLPTLIYQRMA FGTGVLAEMAALS+LIG LALAGVALQQ L+ RSRFGL GH+GR+HD +LGRWR    A LA +L  +L+APLLAL+V SLVPA+GVPL  ++ATL AY E++GRQG T RA+RNSLWLAG AA+ LM++ LPLAYRLQRLP+RW+G+VLS IE+PYALPGVVLA+ACILLFVRPLP++ V+LYGTL LIF+AYLARFL+V +KPV  SLAQLDPSLEEAAQL+GAG WRRL GI+LPL+APALFAGGLLVFL+AVNEL
Sbjct:   69 ITLTDVRGKGVLMFCFMLPMMIPPQVTALSWLQLFGPASPLLNSLNIAPALGAPQPLHSGEGIALLLGIQSAPLVFLALRTSLVALPRELMEAARISGARPFQVWRHTVLPLTRGGLVAGGAMAFVSNLGNFGIPAMLGIPAGYYVLPTLIYQRMAGFGTGVLAEMAALSMLIGGLALAGVALQQRLLKRSRFGLIGHAGRAHDLSLGRWRGGVEAGLAILLAAVLLAPLLALVVGSLVPAMGVPLTVESATLEAYREMLGRQGVTRRAMRNSLWLAGGAALTLMVVCLPLAYRLQRLPQRWQGLVLSVIELPYALPGVVLAVACILLFVRPLPLVEVSLYGTLWLIFIAYLARFLLVGLKPVTASLAQLDPSLEEAAQLAGAGLWRRLSGIVLPLLAPALFAGGLLVFLIAVNEL 484          
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Match: A0A4R4HKK1_9GAMM (Iron ABC transporter permease n=3 Tax=Halomonas TaxID=2745 RepID=A0A4R4HKK1_9GAMM)

HSP 1 Score: 593 bits (1529), Expect = 6.010e-208
Identity = 320/416 (76.92%), Postives = 360/416 (86.54%), Query Frame = 1
Query:    1 ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPPLGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAKQTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTLIYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSGRSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDTATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPERWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVAYLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPALFAGGLLVFLLAVNEL 1248
            ITLT+VR K   VFCFMLPMMIPPQVTAL+WLQLFGPASPLL S+G+AP LGSPQPLYS  GI LLLGIQSAPLVFLALRTSLL+LPREL+EAARI GA+Q QVWG II+P+TRSGL+AGGAMAF +SLGNFGIPAMLGIPAGY VLPTLIYQRMASFGT VLAEMA LS+LIGLLALAGVALQQHL+ RSRFGL GH GR+HDF+LGR R    A +  +L +IL+APL AL+V SLVPA+GVPLNT TATL+AY E++GRQG TWRA+ NSLWLAG AA+VLM + LPLAYRL R+PER +  +L  IEIPYALPGVVLA+ACILLFVRPLP+I V+LYG+L +I VAYLARF+VVC+KPV  SL QLD SLEEAAQL+GA PWRRL  II+PL APAL AGG+LVFL AVNEL
Sbjct:   88 ITLTDVRAKGIWVFCFMLPMMIPPQVTALAWLQLFGPASPLLASLGLAPELGSPQPLYSPAGIGLLLGIQSAPLVFLALRTSLLALPRELVEAARIQGARQRQVWGQIIVPITRSGLVAGGAMAFTASLGNFGIPAMLGIPAGYLVLPTLIYQRMASFGTNVLAEMAGLSVLIGLLALAGVALQQHLLRRSRFGLIGHGGRAHDFSLGRSRVPLEAGMGLVLAMILLAPLTALVVGSLVPAMGVPLNTTTATLDAYREMLGRQGVTWRAMSNSLWLAGGAALVLMAVCLPLAYRLGRMPERLQAWLLGVIEIPYALPGVVLAVACILLFVRPLPLIEVSLYGSLAIILVAYLARFMVVCLKPVTASLGQLDASLEEAAQLAGASPWRRLVTIIMPLTAPALAAGGILVFLTAVNEL 503          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13704.2218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D5LZ89_9GAMM4.780e-26494.95ABC-type transporter, integral membrane subunit n=... [more]
A0A060B4T2_9GAMM4.620e-24387.74ABC transporter permease n=48 Tax=Halomonadaceae T... [more]
A0A1G9AC62_9GAMM6.330e-22982.69Iron(III) transport system permease protein n=20 T... [more]
A0A2N7U1Q2_9GAMM1.480e-22783.41ABC transporter permease n=1 Tax=Halomonas endophy... [more]
UPI001CC688CC1.770e-22682.45iron ABC transporter permease n=1 Tax=Halomonas aq... [more]
A0A6M4FMG8_9GAMM2.900e-22682.21Iron ABC transporter permease n=2 Tax=Halomonas Ta... [more]
A0A3T1DY12_9GAMM2.960e-22594.05Uncharacterized protein n=1 Tax=Halomonas olivaria... [more]
UPI001D0A071A2.000e-21880.29iron ABC transporter permease n=1 Tax=Halomonas ma... [more]
A0A7V7KGX6_9GAMM9.140e-21577.88Iron ABC transporter permease n=2 Tax=Halomonas Ta... [more]
A0A4R4HKK1_9GAMM6.010e-20876.92Iron ABC transporter permease n=3 Tax=Halomonas Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13704contigE-siliculosus-1a_F_contig13704:2..1249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1248
Model size1248
Exons1
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko00001,ko00002,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.P
EggNOG OGs1MWEV@1224,1RP55@1236,1XN5Q@135619,COG1178@1,COG1178@2
EggNOG free text desc.PFAM binding-protein-dependent transport systems inner membrane component
KEGG ModuleM00190
KEGG Pathwayko02010,map02010
KEGG TC3.A.1.10
KEGG koko:K02011
Preferred nameafuB2
Seed eggNOG ortholog1504981.KO116_3531
Seed ortholog evalue6.2e-211
Seed ortholog score740.0
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927887.1566691-CDS-E-siliculosus-1a_F_contig13704:1..12491622927887.1566691-CDS-E-siliculosus-1a_F_contig13704:1..1249Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13704 2..1249 +
1696318723.2108238-CDS-E-siliculosus-1a_F_contig13704:1..12491696318723.2108238-CDS-E-siliculosus-1a_F_contig13704:1..1249Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13704 2..1249 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13704.2218.1prot_E-siliculosus-1a_F_contig13704.2218.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig13704 2..1249 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig13704.2218.1

>prot_E-siliculosus-1a_F_contig13704.2218.1 ID=prot_E-siliculosus-1a_F_contig13704.2218.1|Name=mRNA_E-siliculosus-1a_F_contig13704.2218.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=416bp
ITLTNVRGKSWLVFCFMLPMMIPPQVTALSWLQLFGPASPLLKSIGMAPP
LGSPQPLYSAEGIALLLGIQSAPLVFLALRTSLLSLPRELIEAARISGAK
QTQVWGHIILPVTRSGLIAGGAMAFISSLGNFGIPAMLGIPAGYFVLPTL
IYQRMASFGTGVLAEMAALSLLIGLLALAGVALQQHLMGRSRFGLGGHSG
RSHDFTLGRWRTLATATLAGILLLILVAPLLALIVSSLVPAVGVPLNTDT
ATLNAYTEVVGRQGATWRAVRNSLWLAGSAAVVLMLLSLPLAYRLQRLPE
RWRGVVLSAIEIPYALPGVVLAIACILLFVRPLPIINVALYGTLGLIFVA
YLARFLVVCVKPVATSLAQLDPSLEEAAQLSGAGPWRRLGGIILPLVAPA
LFAGGLLVFLLAVNEL
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mRNA from alignment at E-siliculosus-1a_F_contig13704:2..1249+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig13704.2218.1 ID=mRNA_E-siliculosus-1a_F_contig13704.2218.1|Name=mRNA_E-siliculosus-1a_F_contig13704.2218.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1248bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13704:2..1249+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATTACGCTCACCAATGTGCGCGGCAAATCGTGGCTCGTGTTCTGCTTTAT GCTGCCGATGATGATCCCGCCCCAGGTCACCGCGTTAAGCTGGCTGCAGC TATTCGGCCCGGCGAGTCCGCTACTCAAAAGCATTGGTATGGCACCGCCA TTGGGCAGTCCTCAACCGCTTTACTCCGCTGAAGGCATTGCCCTGCTGTT AGGCATCCAAAGCGCCCCATTGGTGTTTCTTGCCCTGCGCACCAGCTTGC TTTCGCTCCCCCGTGAGCTTATTGAAGCCGCCCGTATTAGCGGCGCTAAA CAGACCCAAGTATGGGGCCATATTATTCTGCCGGTGACCCGCAGCGGCTT GATCGCTGGAGGCGCGATGGCATTTATCTCCAGCCTAGGCAACTTCGGCA TTCCCGCCATGCTGGGCATTCCGGCAGGCTATTTTGTGCTGCCCACGTTG ATCTATCAGCGTATGGCTAGCTTCGGCACCGGCGTACTGGCTGAAATGGC TGCCCTGTCGTTATTAATTGGCTTACTGGCCTTAGCGGGTGTCGCCCTAC AGCAACACTTAATGGGACGCAGCCGGTTTGGATTGGGTGGGCATAGCGGA CGCTCCCATGACTTTACTCTAGGTCGTTGGCGCACCCTGGCGACGGCAAC ACTGGCGGGTATCTTACTGCTTATTTTGGTGGCGCCACTATTGGCGCTGA TCGTCAGTTCGCTAGTGCCCGCCGTGGGCGTACCGCTTAACACCGATACC GCCACGCTTAATGCTTACACCGAAGTGGTGGGTCGCCAAGGGGCAACCTG GCGGGCAGTGCGTAACAGCCTGTGGTTAGCGGGTAGTGCGGCGGTCGTGC TGATGCTGCTAAGCCTGCCACTGGCTTACCGATTGCAGCGCTTGCCAGAA CGCTGGCGGGGCGTGGTGCTCAGCGCTATTGAAATCCCCTACGCGCTCCC CGGTGTGGTGCTGGCAATCGCCTGTATTCTGCTGTTTGTGCGCCCATTGC CAATTATCAATGTCGCGCTTTACGGCACCCTGGGACTCATTTTTGTCGCT TACCTGGCGCGCTTTTTGGTGGTCTGCGTCAAGCCCGTGGCGACCAGCTT GGCACAATTAGATCCTTCCCTTGAAGAGGCCGCACAGTTATCCGGGGCAG GCCCTTGGCGACGGCTTGGCGGCATCATCTTACCGCTGGTAGCACCCGCT CTGTTTGCTGGCGGGCTACTGGTGTTCCTGCTGGCCGTTAACGAACTC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13704:2..1249+

>mRNA_E-siliculosus-1a_F_contig13704.2218.1 ID=mRNA_E-siliculosus-1a_F_contig13704.2218.1|Name=mRNA_E-siliculosus-1a_F_contig13704.2218.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2496bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13704:2..1249+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATTACGCTCACCAATGTGCGCGGCAAATCGTGGCTCGTGTTCTGCTTTAT
GCTGCCGATGATGATCCCGCCCCAGGTCACCGCGTTAAGCTGGCTGCAGC
TATTCGGCCCGGCGAGTCCGCTACTCAAAAGCATTGGTATGGCACCGCCA
TTGGGCAGTCCTCAACCGCTTTACTCCGCTGAAGGCATTGCCCTGCTGTT
AGGCATCCAAAGCGCCCCATTGGTGTTTCTTGCCCTGCGCACCAGCTTGC
TTTCGCTCCCCCGTGAGCTTATTGAAGCCGCCCGTATTAGCGGCGCTAAA
CAGACCCAAGTATGGGGCCATATTATTCTGCCGGTGACCCGCAGCGGCTT
GATCGCTGGAGGCGCGATGGCATTTATCTCCAGCCTAGGCAACTTCGGCA
TTCCCGCCATGCTGGGCATTCCGGCAGGCTATTTTGTGCTGCCCACGTTG
ATCTATCAGCGTATGGCTAGCTTCGGCACCGGCGTACTGGCTGAAATGGC
TGCCCTGTCGTTATTAATTGGCTTACTGGCCTTAGCGGGTGTCGCCCTAC
AGCAACACTTAATGGGACGCAGCCGGTTTGGATTGGGTGGGCATAGCGGA
CGCTCCCATGACTTTACTCTAGGTCGTTGGCGCACCCTGGCGACGGCAAC
ACTGGCGGGTATCTTACTGCTTATTTTGGTGGCGCCACTATTGGCGCTGA
TCGTCAGTTCGCTAGTGCCCGCCGTGGGCGTACCGCTTAACACCGATACC
GCCACGCTTAATGCTTACACCGAAGTGGTGGGTCGCCAAGGGGCAACCTG
GCGGGCAGTGCGTAACAGCCTGTGGTTAGCGGGTAGTGCGGCGGTCGTGC
TGATGCTGCTAAGCCTGCCACTGGCTTACCGATTGCAGCGCTTGCCAGAA
CGCTGGCGGGGCGTGGTGCTCAGCGCTATTGAAATCCCCTACGCGCTCCC
CGGTGTGGTGCTGGCAATCGCCTGTATTCTGCTGTTTGTGCGCCCATTGC
CAATTATCAATGTCGCGCTTTACGGCACCCTGGGACTCATTTTTGTCGCT
TACCTGGCGCGCTTTTTGGTGGTCTGCGTCAAGCCCGTGGCGACCAGCTT
GGCACAATTAGATCCTTCCCTTGAAGAGGCCGCACAGTTATCCGGGGCAG
GCCCTTGGCGACGGCTTGGCGGCATCATCTTACCGCTGGTAGCACCCGCT
CTGTTTGCTGGCGGGCTACTGGTGTTCCTGCTGGCCGTTAACGAACTCAT
TACGCTCACCAATGTGCGCGGCAAATCGTGGCTCGTGTTCTGCTTTATGC
TGCCGATGATGATCCCGCCCCAGGTCACCGCGTTAAGCTGGCTGCAGCTA
TTCGGCCCGGCGAGTCCGCTACTCAAAAGCATTGGTATGGCACCGCCATT
GGGCAGTCCTCAACCGCTTTACTCCGCTGAAGGCATTGCCCTGCTGTTAG
GCATCCAAAGCGCCCCATTGGTGTTTCTTGCCCTGCGCACCAGCTTGCTT
TCGCTCCCCCGTGAGCTTATTGAAGCCGCCCGTATTAGCGGCGCTAAACA
GACCCAAGTATGGGGCCATATTATTCTGCCGGTGACCCGCAGCGGCTTGA
TCGCTGGAGGCGCGATGGCATTTATCTCCAGCCTAGGCAACTTCGGCATT
CCCGCCATGCTGGGCATTCCGGCAGGCTATTTTGTGCTGCCCACGTTGAT
CTATCAGCGTATGGCTAGCTTCGGCACCGGCGTACTGGCTGAAATGGCTG
CCCTGTCGTTATTAATTGGCTTACTGGCCTTAGCGGGTGTCGCCCTACAG
CAACACTTAATGGGACGCAGCCGGTTTGGATTGGGTGGGCATAGCGGACG
CTCCCATGACTTTACTCTAGGTCGTTGGCGCACCCTGGCGACGGCAACAC
TGGCGGGTATCTTACTGCTTATTTTGGTGGCGCCACTATTGGCGCTGATC
GTCAGTTCGCTAGTGCCCGCCGTGGGCGTACCGCTTAACACCGATACCGC
CACGCTTAATGCTTACACCGAAGTGGTGGGTCGCCAAGGGGCAACCTGGC
GGGCAGTGCGTAACAGCCTGTGGTTAGCGGGTAGTGCGGCGGTCGTGCTG
ATGCTGCTAAGCCTGCCACTGGCTTACCGATTGCAGCGCTTGCCAGAACG
CTGGCGGGGCGTGGTGCTCAGCGCTATTGAAATCCCCTACGCGCTCCCCG
GTGTGGTGCTGGCAATCGCCTGTATTCTGCTGTTTGTGCGCCCATTGCCA
ATTATCAATGTCGCGCTTTACGGCACCCTGGGACTCATTTTTGTCGCTTA
CCTGGCGCGCTTTTTGGTGGTCTGCGTCAAGCCCGTGGCGACCAGCTTGG
CACAATTAGATCCTTCCCTTGAAGAGGCCGCACAGTTATCCGGGGCAGGC
CCTTGGCGACGGCTTGGCGGCATCATCTTACCGCTGGTAGCACCCGCTCT
GTTTGCTGGCGGGCTACTGGTGTTCCTGCTGGCCGTTAACGAACTC
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