mRNA_E-siliculosus-1a_F_contig13697.2203.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: A0A3T1DRP8_9GAMM (Adenosylhomocysteine nucleosidase n=1 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DRP8_9GAMM) HSP 1 Score: 293 bits (750), Expect = 1.060e-99 Identity = 149/161 (92.55%), Postives = 155/161 (96.27%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLGT 483
NTGSAGGFATDL IGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAY AD +LREIARNAIASLGEVKVREGLIATGDAFM+DPARV+ATRAQFP MLAVEMEGAAIAQTCHLY CPFVVIRALSDIPGSGDNHL+FD+FLEVAADHSSRMVD MLKQLG+
Sbjct: 17 NTGSAGGFATDLAIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYLADTALREIARNAIASLGEVKVREGLIATGDAFMSDPARVDATRAQFPSMLAVEMEGAAIAQTCHLYQCPFVVIRALSDIPGSGDNHLSFDEFLEVAADHSSRMVDQMLKQLGS 177
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: A0A246RX87_9GAMM (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=5 Tax=Halomonas TaxID=2745 RepID=A0A246RX87_9GAMM) HSP 1 Score: 292 bits (748), Expect = 1.510e-98 Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLGT 483
NTGSAGGFATDL IGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAY AD LRE+ARNAIASLGEVKVREGLIATGDAFM+DPARV+ATRAQFP MLAVEMEGAAIAQTCHLY CPFVVIRALSDIPGSGDNHL+FD+FLEVAADHSSRMVD MLKQLG+
Sbjct: 74 NTGSAGGFATDLAIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYLADTGLREVARNAIASLGEVKVREGLIATGDAFMSDPARVDATRAQFPSMLAVEMEGAAIAQTCHLYQCPFVVIRALSDIPGSGDNHLSFDEFLEVAADHSSRMVDQMLKQLGS 234
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: A0A0D5M3G2_9GAMM (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=29 Tax=root TaxID=1 RepID=A0A0D5M3G2_9GAMM) HSP 1 Score: 288 bits (738), Expect = 5.020e-97 Identity = 146/160 (91.25%), Postives = 153/160 (95.62%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLG 480
NTGSAGGFATDL IGDVIISDEVRHHDVDAVVFGYE+GQVPGMPAAYQAD +LR+IARNAIASLGEV +REGLIATGDAFMADPARVEATRAQFP MLAVEMEGAAIAQTC+LY CPFVVIRALSDIPGSGDNHL+FD+FLEVAADHSSRMVD MLKQL
Sbjct: 74 NTGSAGGFATDLKIGDVIISDEVRHHDVDAVVFGYEMGQVPGMPAAYQADTALRDIARNAIASLGEVNIREGLIATGDAFMADPARVEATRAQFPTMLAVEMEGAAIAQTCYLYQCPFVVIRALSDIPGSGDNHLSFDEFLEVAADHSSRMVDQMLKQLS 233
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: A0A1J8PSJ0_9GAMM (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=7 Tax=Halomonas TaxID=2745 RepID=A0A1J8PSJ0_9GAMM) HSP 1 Score: 287 bits (734), Expect = 2.040e-96 Identity = 146/160 (91.25%), Postives = 152/160 (95.00%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLG 480
NTGSAGGFA DL IGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAY AD SLRE+ARNAIASLGEV+VREGLIATGDAFM+DPARV+ATRAQFP MLAVEME AAIAQTCHLY CPFVVIRALSDIPGSGDNHL+FD+FLEVAADHSSRMVD MLKQLG
Sbjct: 74 NTGSAGGFAADLAIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYLADKSLREVARNAIASLGEVQVREGLIATGDAFMSDPARVDATRAQFPSMLAVEMEAAAIAQTCHLYQCPFVVIRALSDIPGSGDNHLSFDEFLEVAADHSSRMVDQMLKQLG 233
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: H0IXV8_9GAMM (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=31 Tax=Halomonadaceae TaxID=28256 RepID=H0IXV8_9GAMM) HSP 1 Score: 275 bits (703), Expect = 1.070e-91 Identity = 139/160 (86.88%), Postives = 147/160 (91.88%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLG 480
NTGSAGGFATDL IGDVIISDEVRHHDVDAVVFGYE+GQVPGMPAAYQAD LR++AR AIA+LGEV VREGLIATGDAFMADP RV TRAQFP MLAVEMEGAAIAQTCHLY CPFVVIRALSDIPGSGDNHL+F+QFL++AADHSSRMVD ML LG
Sbjct: 74 NTGSAGGFATDLNIGDVIISDEVRHHDVDAVVFGYELGQVPGMPAAYQADKQLRDLARGAIAALGEVNVREGLIATGDAFMADPERVATTRAQFPTMLAVEMEGAAIAQTCHLYGCPFVVIRALSDIPGSGDNHLSFEQFLDIAADHSSRMVDQMLITLG 233
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: A0A0P7Y1U0_9GAMM (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=8 Tax=Halomonas TaxID=2745 RepID=A0A0P7Y1U0_9GAMM) HSP 1 Score: 271 bits (692), Expect = 5.030e-90 Identity = 138/160 (86.25%), Postives = 146/160 (91.25%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLG 480
NTGSAGG A+DL IGD+IISDEVRHHDVDAVVFGYE+GQVPGMPAAY AD SLR+IAR AI +LGEVKVREGLIATGDAFMADPARV+ATRA FP MLAVEME AAIAQTCHLY CPFVVIRALSDIPGSGDNHL+F+QFLEVAADHSSRMVD ML L
Sbjct: 74 NTGSAGGIASDLDIGDIIISDEVRHHDVDAVVFGYEMGQVPGMPAAYLADASLRDIARGAIKTLGEVKVREGLIATGDAFMADPARVDATRAHFPSMLAVEMEAAAIAQTCHLYRCPFVVIRALSDIPGSGDNHLSFEQFLEVAADHSSRMVDQMLLTLS 233
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: A0A6H1Y752_9GAMM (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A6H1Y752_9GAMM) HSP 1 Score: 270 bits (690), Expect = 1.010e-89 Identity = 137/160 (85.62%), Postives = 146/160 (91.25%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLG 480
NTGSAGGFATDL IGDV+ISDE+RHHDVDAVVFGYE+GQVPGMPAAY AD LREIAR AIA+LGEV VREG+IATGDAFMADP RV ATRAQFP MLAVEMEGAAIAQTC+LY CPFVVIRALSDIPGSGDNHL+F+QFL+ AADHSSRMVD ML LG
Sbjct: 74 NTGSAGGFATDLAIGDVVISDELRHHDVDAVVFGYELGQVPGMPAAYPADKRLREIARGAIAALGEVNVREGMIATGDAFMADPDRVAATRAQFPSMLAVEMEGAAIAQTCYLYDCPFVVIRALSDIPGSGDNHLSFEQFLDTAADHSSRMVDQMLLTLG 233
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: A0A1U9R875_9GAMM (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1U9R875_9GAMM) HSP 1 Score: 266 bits (681), Expect = 2.370e-88 Identity = 133/160 (83.12%), Postives = 145/160 (90.62%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLG 480
NTGSAGGFA+DL IGD++ISDEVRHHDVDAVVFGYE+GQVPGMPAAYQAD LRE+AR+AIA+LGEV VREGLIATGDAFM+ P RV ATR FP MLAVEME AAIAQTCHLY CPFVVIRALSDIPGSGDNHL+F+QFL++AADHSSRMVD ML LG
Sbjct: 74 NTGSAGGFASDLNIGDIVISDEVRHHDVDAVVFGYELGQVPGMPAAYQADKQLREVARSAIATLGEVNVREGLIATGDAFMSAPERVAATRENFPAMLAVEMEAAAIAQTCHLYGCPFVVIRALSDIPGSGDNHLSFEQFLDIAADHSSRMVDQMLMALG 233
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: A0A1R4HQ05_9GAMM (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=6 Tax=Halomonas TaxID=2745 RepID=A0A1R4HQ05_9GAMM) HSP 1 Score: 263 bits (673), Expect = 3.910e-87 Identity = 134/160 (83.75%), Postives = 144/160 (90.00%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLG 480
NTGSAGGFA+DL IGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAY AD+ LR IAR AI +GEV VREGLIATGDAFM+DPARV AT+AQFP MLAVEME AAIAQTCHLY CPFVVIRALSDIPG+ DNHL+F+QFL+VAA HSSRMVD ML+ LG
Sbjct: 74 NTGSAGGFASDLNIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYLADVQLRAIARQAIKEVGEVNVREGLIATGDAFMSDPARVAATQAQFPSMLAVEMEAAAIAQTCHLYQCPFVVIRALSDIPGNDDNHLSFEQFLDVAAAHSSRMVDHMLQTLG 233
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Match: A0A368UAT8_9GAMM (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=3 Tax=Halomonas TaxID=2745 RepID=A0A368UAT8_9GAMM) HSP 1 Score: 261 bits (668), Expect = 2.180e-86 Identity = 134/161 (83.23%), Postives = 145/161 (90.06%), Query Frame = 1
Query: 1 NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADISLREIARNAIASLGEVKVREGLIATGDAFMADPARVEATRAQFPLMLAVEMEGAAIAQTCHLYHCPFVVIRALSDIPGSGDNHLTFDQFLEVAADHSSRMVDLMLKQLGT 483
NTGSAGGFATDL IGD+IIS EVRHHDVDAVVFGYEIGQVPGMPAAY AD L +AR+AI LGEV+VREGLIATGDAFMADPARVEATRAQFP MLAVEME AAIAQTC L+ CPFVVIRALSDIPG GDNHL+F+QFL VAADHSSRMVD+ML++L +
Sbjct: 74 NTGSAGGFATDLEIGDIIISSEVRHHDVDAVVFGYEIGQVPGMPAAYPADSDLINVARSAIDILGEVQVREGLIATGDAFMADPARVEATRAQFPDMLAVEMEAAAIAQTCFLFGCPFVVIRALSDIPGDGDNHLSFEQFLSVAADHSSRMVDVMLQRLAS 234 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13697.2203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig13697.2203.1 >prot_E-siliculosus-1a_F_contig13697.2203.1 ID=prot_E-siliculosus-1a_F_contig13697.2203.1|Name=mRNA_E-siliculosus-1a_F_contig13697.2203.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=163bp NTGSAGGFATDLTIGDVIISDEVRHHDVDAVVFGYEIGQVPGMPAAYQADback to top mRNA from alignment at E-siliculosus-1a_F_contig13697:2..490+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig13697.2203.1 ID=mRNA_E-siliculosus-1a_F_contig13697.2203.1|Name=mRNA_E-siliculosus-1a_F_contig13697.2203.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=489bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13697:2..490+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13697:2..490+ >mRNA_E-siliculosus-1a_F_contig13697.2203.1 ID=mRNA_E-siliculosus-1a_F_contig13697.2203.1|Name=mRNA_E-siliculosus-1a_F_contig13697.2203.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=978bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13697:2..490+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |