mRNA_E-siliculosus-1a_F_contig1369.2200.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: D7FXG7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG7_ECTSI) HSP 1 Score: 797 bits (2058), Expect = 3.930e-288 Identity = 375/382 (98.17%), Postives = 379/382 (99.21%), Query Frame = 2
Query: 65 MAMPASCPVLEFVDDQSDSVVTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPFVPCPDGLGVTCISWCSSPFLKPLLVVGTMSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGQVRVHRLERRDLAEAAWASTQTAHLKDEKGETEGVAWSAEWDVNGSALCSTDGNTCRTWISEGDGVSNNWCCTDVFQEVGVGGSGGGGVAGTDRKTAMDRYEEGSAPAPPATVPEILEG 1210
MAMPASCPVLEFVDDQSDS+VTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCE+K AHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAP RWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPW FVPCPDGLGVTCISWCSSPFLKPLLVVGTMSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDG+VRVHRLERRDLAEAAWASTQTAHLKDEKGET+GVAWSAEWDVNGSALCSTDGNTCRTWISEGDGVSNNWCCTDVFQEVGVGGSGGGGVAGTDRKTAMDRYEEGSAPAPPATVPEILEG
Sbjct: 1 MAMPASCPVLEFVDDQSDSIVTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCEIKPAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPARWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWSFVPCPDGLGVTCISWCSSPFLKPLLVVGTMSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGRVRVHRLERRDLAEAAWASTQTAHLKDEKGETKGVAWSAEWDVNGSALCSTDGNTCRTWISEGDGVSNNWCCTDVFQEVGVGGSGGGGVAGTDRKTAMDRYEEGSAPAPPATVPEILEG 382
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: A0A835Z743_9STRA (Nucleoporin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z743_9STRA) HSP 1 Score: 196 bits (498), Expect = 8.080e-54 Identity = 114/339 (33.63%), Postives = 172/339 (50.74%), Query Frame = 2
Query: 65 MAMPASCPVLEFVDDQSDSVVTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPFVPCPDGLGVTCISWCSSPFLKPLLVVGTMSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGQVRVHRLER-RDLAEAAWASTQTAHLKDEKGETEGVAWSAEWDVNGSALC-STDGNTCRTWISEGDGVSNNWCCTD 1075
MA A+ P +F + +D V D+ YD++G+RLA+ S+D +R+ DLDD G W V+ GCE K+AHQG +W++ WAHP F E+ E + + W L DSR V D+ FAPRHLGL++A+ S DG+VR+Y+A D+ +++ W + GVTC+ W S F +P++VVGT G + +W D + + W +L H GV+ V W+P ++ IA+CG D ++VH+L+R E T + +T G W EW+V G+ L S+D + W + G +W C D
Sbjct: 1 MASWANKPASQFPTNHAD-FVHDVKYDFYGKRLATCSSDQSVRVWDLDDKGEWTVKSGCEWKNAHQGMIWRLAWAHPEFXXXXXXXXXXXXXXXXEEQEGMRLYTDEATAQNKTT-----WYPKAQLSDSRKQVADIDFAPRHLGLKLATGSADGNVRIYEAIDIMNLNHWPLQE--VFEVGRNAGVTCLCWNRSGFDQPMIVVGTDKGDLLVWRYD---DVMRVWVLAAELKGH-EHGVNDVDWAPNMGRSYHLIASCGADKTLKVHQLKRVGGTIETGDKYPLTCN------DTLGHVWRVEWNVTGTVLATSSDDSAVMLWKMDFKG---DWVCVD 318
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: UPI000C04B30A (nucleoporin SEH1-like isoform X2 n=3 Tax=Pocilloporidae TaxID=46729 RepID=UPI000C04B30A) HSP 1 Score: 186 bits (472), Expect = 7.690e-50 Identity = 114/336 (33.93%), Postives = 176/336 (52.38%), Query Frame = 2
Query: 122 VVTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPFVPCPDGLGVTCISWCSSPFLKPLLVVGT------MSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGQVRVHRLERRDLAEA-AWASTQTAHLKDEKGETEGVAWSAEWDVNGSALCSTDGNTC-RTWISEGDGVSNNWCCTDVFQEVGVGGS 1105
++ D++YDYHGRR+A+ S+D +++ DL ++G W + H G++WKV WAHP FG Q+LA+CS DRT +WEE SG G+S+ W+ T+L DSR V DVKFAP+HLGL++A+ S+DG VR+Y+A D+ ++S W++ L +C+SW S P+L VG+ G VQI E KW +V L + V V+++P ++ +A D ++ +H+ R A A + L + + + W EW++ G+ L S+ + C R W + NNW C V + G+ GS
Sbjct: 14 LIHDVSYDYHGRRMATCSSDQSVKVWDLGEDGQWHCTASWKT---HSGSVWKVTWAHPEFG-QVLASCSFDRTAAVWEEQVVG------SGDGISQ-RQSHWVKRTSLVDSRTSVTDVKFAPKHLGLQLATCSKDGTVRIYEAPDIMNLSQWQLHN----EISHKLSCSCVSWNLSRVHPPMLAVGSNDSNTSAGGKVQI---HEYNEASRKWHRVETLMAI-TDAVHDVAFAPNLGRSYHLLAIASKDVRIMMHKPYREQGTGAGASLAKLDISLAAQFNDHDSQVWRVEWNITGTILASSGDDGCVRLWKAN---YLNNWKCITVLRGDGISGS 327
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: A0A8K1CKM4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKM4_PYTOL) HSP 1 Score: 185 bits (469), Expect = 8.680e-50 Identity = 113/325 (34.77%), Postives = 167/325 (51.38%), Query Frame = 2
Query: 110 QSDSVVTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPFVPCPDGLGVTCISWCSSPFLKPLLVVGTMSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGQVRVHRLERRDLAEAAWASTQTAHLKDEKGETEGVAWSAEWDVNGSALCST-DGNTCRTWISEGDGVSNNWCCTDVF 1081
Q V DL++D++G RLA+ S+D I+I + + G W + CE +AHQ ++WK+ WAHP FG+ ++ G + S + SR W L DSR V DVKFAPRHLGLR+A+ASEDG VR+Y+A D+ ++S W + F+ D GVTCISW S F P++VVG S +V++W G +W V +L H + + V W+P ++ +AT D VR+ +L+ +D + H D + W EW++ G+ L S+ D T R W S+ +G NW C +
Sbjct: 10 QHGDFVHDLSFDFYGTRLATCSSDRKIKIWE-EIAGEW--KPQCEW-NAHQASVWKIAWAHPEFGQIXXXXXXXXXXXXXXDQGLPLNGGVQASSVPASRET---WRNQAQLVDSRESVHDVKFAPRHLGLRLATASEDGFVRMYEAIDVMNLSHWPLQE-EFLA--DKEGVTCISWNQSRFEAPMIVVGGNSDVVKVW---GYNNSYRRWQVVAELQGH-TDAIHDVCWAPNMGRSYHLVATASKDRTVRIWKLKMQDTLQCDVEEVALKHHHDSE------VWRVEWNITGTMLASSGDDGTVRLWKSDAEG---NWVCVNTI 311
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: B8LD23_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD23_THAPS) HSP 1 Score: 183 bits (465), Expect = 1.830e-49 Identity = 114/331 (34.44%), Postives = 166/331 (50.15%), Query Frame = 2
Query: 125 VTDLAYDYHGRRLASVSADGVIRIRDLDDNGV---WCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPF-----VPCPDGLGVTCISWCSSPFLKPLLVVGTMSGLVQIWLSDGTTEELGKWSKVLDLPEHGS-----RGVSSVSWSPQFCTTFDRIATCGGDGQVRVHRLERR--DLAEAAWASTQTAHLKDEKGETEGVAWSAEWDVNGSALCST-DGNTCRTWISEGDGVSNNWCC 1069
V D+A+DY+GRR A+ S D +R+ DL+ +G W AH+G + ++ WAHP FG QLLAT G A RW+ TL D+R V V+FAPRHLGLR+AS S DG VR+Y+A D +++ WK+ V + +GV+ +SWC+ F P LV G SG V I+ D W + + LP H + RGV V+W+P ++ IA+CG D Q++VHR++R + +A AS+ + + + AW +W+V G+ L S+ DG + W S+ G W C
Sbjct: 11 VLDMAFDYYGRRFATASGDRTVRVWDLNGDGTTNEW---------QAHRGAVHRISWAHPEFG-QLLATA------------------------GAGEYATSRWVNKATLSDARRAVTTVEFAPRHLGLRLASGSADGVVRIYEALDTMNLNHWKLDGRNSGLDGNVSSNENMGVSSLSWCTGRFEPPTLVTGFSSGRVSIYRYDDGQRS---WLEYIRLPSHATASGVPRGVLDVAWAPNVGRSYHLIASCGKDNQLKVHRVKRGRGNKGDAEGASSSSLVYEGTEVLDRTQAWRIQWNVTGTVLASSGDGGVVKLWKSDFQG---RWKC 301
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: UPI0009E2C795 (nucleoporin seh1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2C795) HSP 1 Score: 181 bits (459), Expect = 4.870e-48 Identity = 121/354 (34.18%), Postives = 182/354 (51.41%), Query Frame = 2
Query: 122 VVTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPFVPCPDGLGVTCISWCSSPFLKPLLVVGT------MSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGQVRVHRL----ERRDLAEAAWASTQTAHLKDEKGETEGVAWSAEWDVNGSALCSTDGNTC-RTWISEGDGVSNNWCCTDVFQEVGVGGSGGG-GVAGTDRKTAM 1147
++ D++YD+HGRR+A+ S+D +++ DL ++G W + H G++WKV WAHP FG Q+LA+CS DRT +WEE SG G+S+G W+ T+L DSR V DVKFAP+HLGL++A+ S+DG VR+Y+A D+ ++S W + L +C+SW S P+L VG+ G VQI E KW ++ L + V V+++P ++ +A D VR+ L E+ +A + + L + + E W EW+V G+ L S+ + C R W + NNW C V + G G G + G D K AM
Sbjct: 14 LIHDVSYDFHGRRMATCSSDQSVKVWDLGEDGQWHCTASWKT---HSGSVWKVTWAHPEFG-QVLASCSFDRTAAVWEEQVVG------SGDGISQGQS-HWVKRTSLVDSRTSVTDVKFAPKHLGLQLATCSKDGTVRIYEAPDIMNLSHWLLQN----EIQHKLSCSCVSWNLSRVHAPMLAVGSDDPNTSAGGKVQI---HEYNEASRKWQRLETLMAI-TDAVHDVAFAPNLGRSYHLLAIASKD--VRIMMLKPYGEQGTGTGGNFAKLENS-LAAQFSDHESQVWRVEWNVTGTILASSGDDGCVRLWKAN---YLNNWKCIAVLRGDGTPGPTNGLSMTGQDAKAAM 342
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: UPI001CF15CFA (nucleoporin SEH1-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF15CFA) HSP 1 Score: 179 bits (454), Expect = 2.580e-47 Identity = 119/357 (33.33%), Postives = 180/357 (50.42%), Query Frame = 2
Query: 122 VVTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPFVPCPDGLGVTCISWCSSPFLKPLLVVGT------MSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGQVRVHR------------LERRDLAEAAWASTQTAHLKDEKGETEGVAWSAEWDVNGSALCST-DGNTCRTWISEGDGVSNNWCCTDVFQEVGVGGSGGGGVAGTDR 1135
++ D++YDYHGRR+A+ S+D +++ DL++NG W + H G++WKV WAHP FG Q+LA+CS DRT +WEE +G G+ G W+ T+L DSR V DVKFAP+HLGLR+A+ S+DG VR+Y+A D+ ++S W + L +C+SW S P+L VG+ G VQI E KW +V L + V+ V+++P ++ +A D ++ + + L + D++ AA S + E W EW+V G+ L S+ D R W + +NW V + GV G GG + TD+
Sbjct: 14 LIHDVSYDYHGRRMATCSSDQSVKVWDLEENGQWICTASWKT---HSGSVWKVTWAHPEFG-QVLASCSFDRTAAVWEEQVVG------TGDGILHGQS-HWVKRTSLVDSRTSVTDVKFAPKHLGLRLATCSKDGTVRIYEAPDIMNLSQWHLQN----EIQHKLSCSCVSWNPSRVHAPMLAVGSDDRNTSAGGKVQI---HEYNEASRKWHRVETLMAI-TDAVNDVAFAPNLGRSYHLLAIASKDVRIMMLKPYGDQGTSAGGNLAKLDISLAARFS-----------DHESQVWRVEWNVTGTILASSGDDGRVRLWKAN---YLDNWKSIAVLRGDGVPGFTGGPSSVTDK 337
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: A0A3B4D6Y0_PYGNA (SEH1 like nucleoporin n=19 Tax=Characiphysae TaxID=186628 RepID=A0A3B4D6Y0_PYGNA) HSP 1 Score: 177 bits (450), Expect = 1.260e-46 Identity = 117/347 (33.72%), Postives = 182/347 (52.45%), Query Frame = 2
Query: 122 VVTDLAYDYHGRRLASVSADGVIRIRDLDDNGVWCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEEHSEAAPGQERSGIGLSRGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPFVPCPDGLGVTCISW--CSSPFLKPLLVVG------TMSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGQVRVHRLE--RRDLAEAAWASTQTAHLKDEKGETEGVAWSAEWDVNGSALCSTDGNTC-RTWISEGDGVSNNWCCTDVFQEVG--VGGSGGGGVA 1123
++ D++YD+HGRR+A+ S+D +++ D DNG W + H G++W+V WAHP FG Q+LA+CS DRT +WEE + ++R GLS WI TTL DSR V DVKFAP+H+GL +A+ S DG VR+Y+A D+ ++S W + + C L +CISW SS P++ VG T SG VQI+ + T + K ++ + + V ++++P +F +A D VR+ +L RR+ A ++ + + + W W++ + L S+ + C R W + +NW CT + + G V GS G G A
Sbjct: 14 LIHDVSYDFHGRRMATCSSDQSVKVWDKSDNGEWHCTASWKT---HSGSVWRVTWAHPEFG-QVLASCSFDRTAAVWEEIVGESNDKQR---GLSH-----WIKRTTLVDSRTSVTDVKFAPKHMGLVLATCSADGVVRIYEAPDVMNLSQWSLQHE--ISCK--LSCSCISWNPSSSRAHPPMIAVGSDDNNVTYSGKVQIYEYNENTRKYAKAETLMTVTDP----VHDIAFAPNLGRSFHVLAIATKD--VRIFKLIPLRRENATSSGPTKFEVQVMAQFDSHNSQVWRVSWNITSTLLASSGDDGCVRLWKAN---YMDNWKCTGILRGDGSPVNGSSGQGTA 335
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: F0W8G8_9STRA (Nucleoporinlike protein putative n=2 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8G8_9STRA) HSP 1 Score: 180 bits (457), Expect = 3.370e-46 Identity = 127/378 (33.60%), Postives = 177/378 (46.83%), Query Frame = 2
Query: 125 VTDLAYDYHGRRLASVSADGVIRIRDLD---------DNGVWCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEE----HSEAAPGQ---ERSG--IGLS-----------------RGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPFVPCPDGLGVTCISWCSSPFLKPLLVVGTMSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGQVRVHRLERR------DLAEAAWASTQTAHLKDEKGET-----------------EGVAWSAEWDVNGSALCST-DGNTCRTWISEGDGVSNNWCCTDVF 1081
+ D+++D +G+RLA+ S+D I+I L DN W ++ SAHQ ++WKV WAHP FG Q++A+CS DRTV IWE+ H A Q E +G IG S G W L DSR V DVKFAPRHLGLR+A+AS DG VR+Y+A D+ ++S W + F+ DG TCISW S P +VVG S +V++W G + +W V++L H + V W+P +F +AT D VR+ L + D+ A+ + T + G + W EW+V G+ L S+ D T W + DG NW C
Sbjct: 134 IHDMSFDLYGKRLATCSSDRKIKIWTLRFKRCKQGTCDNSEWVLDSEW---SAHQASVWKVTWAHPEFG-QIIASCSFDRTVSIWEDQGVLHHRQADSQTSLEAAGNLIGSSVEGTFPSCVPSGGSYNASGIRESWRNQAQLVDSRESVHDVKFAPRHLGLRLATASGDGFVRMYEAIDVVNLSHWPLQE-EFLADRDG--ATCISWNQSRIDPPTIVVGGNSNIVKVW---GYSNAFRRWQAVVELQGHND-AIHDVCWAPNMGRSFHLVATASKDRVVRIWELRFKSDGTIGDVPNASTGTLSTTAVSSNAGGNSQLPRCTVKLVASKHHHDAEVWRVEWNVTGTMLASSGDDGTVHMWKCDCDG---NWVCISTI 497
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Match: F0W8H0_9STRA (Nucleoporinlike protein putative n=3 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8H0_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.270e-45 Identity = 127/378 (33.60%), Postives = 177/378 (46.83%), Query Frame = 2
Query: 125 VTDLAYDYHGRRLASVSADGVIRIRDLD---------DNGVWCVEEGCELKSAHQGTLWKVDWAHPGFGKQLLATCSQDRTVKIWEE----HSEAAPGQ---ERSG--IGLS-----------------RGAPGRWIVATTLKDSRYGVVDVKFAPRHLGLRIASASEDGHVRVYKATDLSSVSGWKMAPWPFVPCPDGLGVTCISWCSSPFLKPLLVVGTMSGLVQIWLSDGTTEELGKWSKVLDLPEHGSRGVSSVSWSPQFCTTFDRIATCGGDGQVRVHRLERR------DLAEAAWASTQTAHLKDEKGET-----------------EGVAWSAEWDVNGSALCST-DGNTCRTWISEGDGVSNNWCCTDVF 1081
+ D+++D +G+RLA+ S+D I+I L DN W ++ SAHQ ++WKV WAHP FG Q++A+CS DRTV IWE+ H A Q E +G IG S G W L DSR V DVKFAPRHLGLR+A+AS DG VR+Y+A D+ ++S W + F+ DG TCISW S P +VVG S +V++W G + +W V++L H + V W+P +F +AT D VR+ L + D+ A+ + T + G + W EW+V G+ L S+ D T W + DG NW C
Sbjct: 215 IHDMSFDLYGKRLATCSSDRKIKIWTLRFKRCKQGTCDNSEWVLDSEW---SAHQASVWKVTWAHPEFG-QIIASCSFDRTVSIWEDQGVLHHRQADSQTSLEAAGNLIGSSVEGTFPSCVPSGGSYNASGIRESWRNQAQLVDSRESVHDVKFAPRHLGLRLATASGDGFVRMYEAIDVVNLSHWPLQE-EFLADRDG--ATCISWNQSRIDPPTIVVGGNSNIVKVW---GYSNAFRRWQAVVELQGHND-AIHDVCWAPNMGRSFHLVATASKDRVVRIWELRFKSDGTIGDVPNASTGTLSTTAVSSNAGGNSQLPRCTVKLVASKHHHDAEVWRVEWNVTGTMLASSGDDGTVHMWKCDCDG---NWVCISTI 578 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1369.2200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1369.2200.1 >prot_E-siliculosus-1a_F_contig1369.2200.1 ID=prot_E-siliculosus-1a_F_contig1369.2200.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2200.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=383bp MAMPASCPVLEFVDDQSDSVVTDLAYDYHGRRLASVSADGVIRIRDLDDNback to top mRNA from alignment at E-siliculosus-1a_F_contig1369:23334..29704+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1369.2200.1 ID=mRNA_E-siliculosus-1a_F_contig1369.2200.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2200.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6371bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1369:23334..29704+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1369:23334..29704+ >mRNA_E-siliculosus-1a_F_contig1369.2200.1 ID=mRNA_E-siliculosus-1a_F_contig1369.2200.1|Name=mRNA_E-siliculosus-1a_F_contig1369.2200.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2298bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1369:23334..29704+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |