mRNA_E-siliculosus-1a_F_contig1367.2191.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: D8LKZ7_ECTSI (Methionyl-tRNA formyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ7_ECTSI) HSP 1 Score: 805 bits (2078), Expect = 1.050e-291 Identity = 414/429 (96.50%), Postives = 418/429 (97.44%), Query Frame = 1
Query: 1 LPAACCLHMGCKRPLGAITGIYALGMRCSLAFVPSTAPHASRLASNGLHRARAAVVSTSTRRSLLSAKTTTSMETANGERKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIGCLPGVWDNTVEKTPQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFSWGKEGTDSEARKVKLITTAVADPTAAGHDADGGTIEETSVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWVELEPLADAVPA 1287
LPAACCLHMGCKRPLGAITGIYALGMRCSLAFVPSTAPHA RLASNGLHRAR AVV TSTRRSL SAKTTTSM+TAN ERKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGI VMTP TARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGD ETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLI CLPGVWDNTVEK+PQDDAAAVKAAKISVDEARCCFKT+SATTIHNKVRAFAGWPGTWAMFSWGKEGTDSEARKVKLITTAVADP AAG DADGGTIEET+VAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWVELEPLADAVPA
Sbjct: 23 LPAACCLHMGCKRPLGAITGIYALGMRCSLAFVPSTAPHALRLASNGLHRARGAVVPTSTRRSLGSAKTTTSMDTANVERKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGITVMTPGTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDTETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIECLPGVWDNTVEKSPQDDAAAVKAAKISVDEARCCFKTTSATTIHNKVRAFAGWPGTWAMFSWGKEGTDSEARKVKLITTAVADPAAAGDDADGGTIEETAVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWVELEPLADAVPA 451
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: A0A835YXF4_9STRA (Methionyl-tRNA formyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXF4_9STRA) HSP 1 Score: 399 bits (1026), Expect = 2.130e-133 Identity = 208/342 (60.82%), Postives = 241/342 (70.47%), Query Frame = 1
Query: 238 RKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIGCLPGVWDNTVEKTPQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFSWGKEGTDSEARKVKLITTAVADPTAAGHDADGGTIEETSVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWVELE 1263
RKKVVFLGTP++AA SL LLLEAS +G+GGGFD+ V+ PPARTGR K + PSAV LAD G+ VM P ARD EFL L EL PDLCITAAYGQFLP++FLDIP+ GTLN+HPSLLP YRGASPVQRCL+AGDA TGVT+ FT LKMD+GPV+RQ R L G EKAP LL+ELF +G L+G LP VWD + + QDDA A +A K+ EARC F A IHNKVRAFAGWPGTW +WG T KVKL+TTAV G A G R VV+ G ALE+TC DGSVLRVLE+QP K+VM A++F NG RG + WV+ E
Sbjct: 10 RKKVVFLGTPDVAAHSLSLLLEASSKGEGGGFDISAVVTQPPARTGRGKKVLPSAVHQLADQHGLPVMVPERARDPEFLEALRELGPDLCITAAYGQFLPQKFLDIPRHGTLNIHPSLLPKYRGASPVQRCLQAGDAVTGVTILFTELKMDSGPVLRQRSRALRGDEKAPALLRELFADGAAALVGALPEVWDGSAQPVAQDDAQATEAPKLDAAEARCDFAKEGARAIHNKVRAFAGWPGTWVRLAWGGRAT-----KVKLVTTAV------GEGAGRGG--------RGVVLAGGALEVTCRDGSVLRVLEVQPEGKRVMDARSFVNGARGAAVTWVDEE 332
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: W7T6E6_9STRA (Methionyl-tRNA formyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6E6_9STRA) HSP 1 Score: 352 bits (902), Expect = 9.980e-114 Identity = 187/343 (54.52%), Postives = 232/343 (67.64%), Query Frame = 1
Query: 241 KKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIGCLPGVWDNTVEKTPQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFSWGKEGTDS---EARKVKLITTAVADPTAAGHDADGGTIEETSVAERQVVMKGD---ALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRW 1251
K+VVFLGTP++AA +L LL AS+ G+GGGF++V V+ PPA +GRK L PS VQ LA+SE + V+ P A+D FL+ LE L PDLCITAAYG FLP +FL IP++GTLN+HPSLLP YRGASPVQR L+AGDA TGV+V FT LKMDAGP++ Q L G EKAPELLQ LF GT+ L+ LP VWD T Q + A +A KI +EA+ CF+ SA +HNKVRAFAGWPGTWA+F +EG +A ++K++TT V G EE A R V + G L + C DGSVL +LE+QP KKVM K++ANGLRG +RW
Sbjct: 81 KRVVFLGTPDVAALTLSRLLAASKDGRGGGFEIVSVVTQPPAPSGRKLKLTPSPVQTLAESEKVPVLCPDKAKDPIFLSALETLAPDLCITAAYGNFLPSKFLAIPRYGTLNIHPSLLPKYRGASPVQRTLQAGDAVTGVSVLFTELKMDAGPLLAQVPYPLRGEEKAPELLQTLFTAGTEALLEALPSVWDGTARLVEQQEEQASQAEKIRAEEAQICFERESALRVHNKVRAFAGWPGTWAVFEVAEEGEKEGGGKAVRLKIVTTRV------------GEGEEGVGAGRVVGVLGGKKGGLRVRCGDGSVLDILEVQPPGKKVMDCKSYANGLRGRTLRW 411
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: R1CZB6_EMIHU (Methionyl-tRNA formyltransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZB6_EMIHU) HSP 1 Score: 349 bits (896), Expect = 9.350e-113 Identity = 197/365 (53.97%), Postives = 243/365 (66.58%), Query Frame = 1
Query: 223 TANGERKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQL------IGCLPGVWDNTV--EKTPQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFSWGKEGTDSEARKVKLITTAVADPTAAGHDADGGTIEETS-VAERQVVMK--GDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWVELEPLADAVP 1284
T + +++VVFLGTP +AA SL LLL+AS QG GGGF+V VS PPAR+GRK L S VQ LA++ GI ++TP +A++E FLA L+ELQPDLCITAAYG FLP+RFLDIP+FGTLNVHPSLLPLYRGA+P+QRCLEAGDA GV+VAFTVLKMDAGP++RQ R L G E+ P LL ELF GT+ L + LP VWD + + PQ+DA A KAAK+S +A + SA+ HNKVRAFAGWPGTW S G +E +VKL+ T + + H + ++ +S RQV + G AL L C DGS+L VL L KK + A+AF NGL G W P A A P
Sbjct: 31 TMSAAKRRVVFLGTPAVAARSLELLLDASAQGGGGGFEVAAVVSQPPARSGRKMKLTASPVQTLAEARGIELLTPASAKEEAFLARLDELQPDLCITAAYGCFLPQRFLDIPRFGTLNVHPSLLPLYRGAAPLQRCLEAGDAVAGVSVAFTVLKMDAGPLLRQEERPLVGDEQEPPLLLELFERGTEPLEAEDLLLDALPSVWDGSCAGQLAPQEDARATKAAKLSTADAELRLEQLSASEAHNKVRAFAGWPGTWTRISIG----GAEPIRVKLLQTRLGAAARSRHLSP--PLQSSSRPTGRQVALAAGGGALRLVCGDGSLLEVLRLTLPGKKPVDARAFWNGLNGRRAEWASAPPDAAAAP 389
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: A0A7S0L2B0_9EUKA (Methionyl-tRNA formyltransferase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L2B0_9EUKA) HSP 1 Score: 344 bits (883), Expect = 1.730e-111 Identity = 188/345 (54.49%), Postives = 228/345 (66.09%), Query Frame = 1
Query: 226 ANGERKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIGCLPGVWDNTVEKT--PQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFSWGKEGTDSEARKVKLITTAVADPTAAGHDADGGTIEETSVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWV 1254
A +RKKVVFLGTP +AA SL LLLEASR G+GGGFDV VS P ARTGRKK+L PS V A+A+++G+ V+ P A++ FLA +EE+ PDLCITAAYG FLPRRFL+I K GTLN+HPSLLPLYRGA+P+QRCLEAGD GV+V FTVLKMDAGP++RQ R L E+APELL ELF GT+ L+ LP VWD T ++ QD A A AAK+SV+EA F A HN+VRAF+ WPGTW S G +E + KL+ T V D G +E + R + L + C+DGSVL VL L KK + A AF NGL G + WV
Sbjct: 49 AAADRKKVVFLGTPSVAARSLELLLEASRAGRGGGFDVAAVVSQPDARTGRKKLLTPSPVSAMAEAQGVRVLKPPNAKEVGFLAEIEEIAPDLCITAAYGCFLPRRFLEIGKCGTLNIHPSLLPLYRGAAPLQRCLEAGDEVGGVSVLFTVLKMDAGPILRQVRRPLATEEQAPELLLELFETGTELLVDALPSVWDGTYKEVLEEQDGALATSAAKVSVEEAALDFSVIGAAAAHNRVRAFSPWPGTWTAISIGS----AEPVRAKLLQTRVID----------GLLEART---RSLAHSNGGLRIVCADGSVLEVLRLTMPGKKPVGASAFWNGLNGRSVEWV 376
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: A0A6S9KXU3_HETAK (Methionyl-tRNA formyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KXU3_HETAK) HSP 1 Score: 343 bits (880), Expect = 6.770e-111 Identity = 180/345 (52.17%), Postives = 234/345 (67.83%), Query Frame = 1
Query: 217 METANGERKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIGCLPGVWDNTVEKTPQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFSWGKEGTDSEARKVKLITTAVADPTAAGHDADGGTIEETSVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRW 1251
M +++ +RKKV+FLGTP++AA +L LL+AS +G+GGGFD+ V+ PPA GRKK L PS VQ LA+ +G+ V+TP A+D+ F+ L ++ PDLCITAAYGQFLP +FL+IPKFGTLN+HPSLLP +RGASPVQR LEAGDA TGV+V FTVLKMDAGP+ + G E+AP LL+ LF GT L+ LP VWD T++ T QD+A AV A KIS + F A HN+ R FAGWPG + F G+ E +K++TT + + G+ E T ++V +KG+ LE+ C DGSVL V ELQP NKK M+ KA+ NGLRG+ +RW
Sbjct: 49 MMSSSTDRKKVIFLGTPDVAAQTLNRLLKASEEGRGGGFDISAVVTQPPAPAGRKKKLTPSPVQVLAEEKGLIVLTPEKAKDDNFIETLTQIGPDLCITAAYGQFLPTKFLNIPKFGTLNIHPSLLPRWRGASPVQRALEAGDAVTGVSVLFTVLKMDAGPIAKSIEYTCTGDEQAPWLLEHLFGLGTDGLVEVLPAVWDGTIKTTEQDEATAVAADKISKADGLLDFGAMGAAECHNRGRGFAGWPGVQSTFLIGES---DEPTSIKILTTKLVAK-------ESGSSEPT----QEVKLKGNLLEVICGDGSVLGVTELQPPNKKGMAVKAWWNGLRGERVRW 379
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: A0A7S2Y3A0_9STRA (Methionyl-tRNA formyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3A0_9STRA) HSP 1 Score: 344 bits (882), Expect = 1.150e-110 Identity = 184/349 (52.72%), Postives = 230/349 (65.90%), Query Frame = 1
Query: 223 TANGERKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGL-EELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIGCLPGVWDNTVEKTPQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFS-WGKEGTDSEARKVKLITTAVADPTAAGHDADGGTIEETSVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWVELE 1263
T + K+VVFLGTP +AA SL LLL+AS+ G+GGGF+V V+ PPAR+GRKK L PS V LA+++GI V+TP A+DE+FL L E++ PDLCITAAYGQFLP +FL+IPKFGTLN+HPSLLPLYRGASPVQR L+ G AETGV+V FTVLKMDAGP+VRQ LDG E+ P+LL LF GTK+L+ LP VW PQD+ A KA KI E F+ A HNKVR FAGWPGTWA FS GK+ + + + K+I+ A P +S++ + K +E+ C DGS+ + E+Q NK +K F NGLRG+EM W E
Sbjct: 89 TEGSDPKRVVFLGTPPVAARSLELLLDASKSGRGGGFEVSAVVTQPPARSGRKKRLTPSPVHQLAEAQGIPVLTPEKAKDEDFLQALREDINPDLCITAAYGQFLPTKFLNIPKFGTLNIHPSLLPLYRGASPVQRSLQDGVAETGVSVLFTVLKMDAGPIVRQPRITLDGDEQTPDLLLRLFELGTKELVDALPSVWSGECIPIPQDETLATKADKIDKSEGLLDFR-EGAEVCHNKVRGFAGWPGTWAPFSIGGKDPVNLKIKASKIISRATNQP--------------SSLSNNASLNKDGVIEVQCDDGSIFGICEIQAPNKNSQPSKVFWNGLRGEEMSWATEE 422
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: A0A7S1XQ41_9STRA (Methionyl-tRNA formyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQ41_9STRA) HSP 1 Score: 327 bits (839), Expect = 1.870e-105 Identity = 178/339 (52.51%), Postives = 226/339 (66.67%), Query Frame = 1
Query: 241 KKVVFLGTPEIAASSLGLLLEASRQGKGGG-FDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIGCLPGVWDNTVEKTPQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFSWGKEGTDSEARKVKLITTAVADPTAAGHDADGGTIEETSVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWV 1254
KKVVFLGTP++AA SL +LL+ S +G G +++V V+NPPAR GR K + S V LA+ G+ +TP +A+D EFL LE + DLCITAAYGQ+LP+RFL PKFGTLNVHPSLLP +RGASPVQR LEAGD TGV+V FTV KMDAGP++ Q R L G E+APELL ELF EGT L+ L GV+D + E QD+AA A KIS D+ARC + +A TIH++ R FAGWPGTW M S EG E +K K T + + A R+V ++G A +TC+DGSVL + ++QP KK+M AKA+ NG+RG ++ WV
Sbjct: 5 KKVVFLGTPDVAARSLEILLDRSAEGAAAGLYEIVGVVTNPPARKGRGKKIVASPVGTLAEERGLKCLTPASAKDAEFLDELEAMGVDLCITAAYGQYLPKRFLATPKFGTLNVHPSLLPRWRGASPVQRSLEAGDETTGVSVLFTVTKMDAGPILAQADRTLGGDERAPELLMELFEEGTNLLVDNLAGVFDGSAEPWEQDEAAVTAADKISSDDARCDPASEAAATIHHRARGFAGWPGTWVMLSI--EG--GEPQKFKFSHTRLGEGAGAADS-------------REVTLEGKAARITCADGSVLDIEKIQPPTKKMMDAKAWWNGVRGRKVEWV 326
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: A0A0G4EPG3_VITBC (Methionyl-tRNA formyltransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EPG3_VITBC) HSP 1 Score: 326 bits (835), Expect = 6.980e-104 Identity = 180/371 (48.52%), Postives = 239/371 (64.42%), Query Frame = 1
Query: 178 TRRSLLSAKTTTSMETANGE-RKKVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIGCLPGVWDNTVEKTPQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFSWGKEGTD------SEARKVKLITTAV--ADPTAAGHDADGGTIEETSVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRGDEMRWVELE 1263
T RS +S+ + S E A G R+KVVFLGTP++AA L + +A+++ G FD++ V+NPPA GRK+ + PS VQA A+ G+ V P DE FL +E L PDLCITAAYG FLP+RFLDIP++GTLN+HPSLLP YRGA+PVQR LEAG+A TGV+V TVLKMDAGPV++Q L G E P+LL LF GT L+ LP VW PQD++ A KA K++ DE F +A + HNK+RAF+GWPG W+ F+ D +E K+KL+++ + P++A DG A+R + ++GDAL++ C DGS L + +LQP ++K M AKAF NGLRG +RWV E
Sbjct: 40 TARSRVSSLASASTEGAEGVVRRKVVFLGTPDVAALCLQRIHKAAQEDSSG-FDLMGVVTNPPAPVGRKRTVVPSPVQAYAEENGLPVWAPDKPSDEAFLNEMEALSPDLCITAAYGGFLPQRFLDIPEYGTLNIHPSLLPKYRGAAPVQRALEAGEAVTGVSVVRTVLKMDAGPVLKQIEYPLTGDETCPQLLHTLFELGTDALLDLLPSVWRREAPAQPQDESLATKARKLTADEGELRFNRETAASAHNKIRAFSGWPGCWSEFTLTSGSDDDAPPQDTETLKMKLLSSRLLRGGPSSAS---DGNASSAPPSADRLIDLQGDALKIVCFDGSELGITQLQPQSRKAMGAKAFWNGLRGRLVRWVGAE 406
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Match: A0A8J5X4E8_DIALT (Methionyl-tRNA formyltransferase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X4E8_DIALT) HSP 1 Score: 307 bits (786), Expect = 1.070e-96 Identity = 179/342 (52.34%), Postives = 216/342 (63.16%), Query Frame = 1
Query: 241 KKVVFLGTPEIAASSLGLLLEASR-QGKGGGFDVVRAVSNPPARTGRKKVLQPSAVQALADSEGIAVMTPTTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPLYRGASPVQRCLEAGDAETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGTKQLIGCLPGVWDN--TVEKTPQDDAAAVKAAKISVDEARCCFKTSSATTIHNKVRAFAGWPGTWAMFSWGKEGTDSEARKVKLITTAVADPTAAGHDADGGTIEETSVAERQVVMKGDALELTCSDGSVLRVLELQPLNKKVMSAKAFANGLRG-DEMRWV 1254
++VVFLGTP +AA SL +LL+A+R F+VV VS PPA GRKKVL S V ALAD+ G+ V+TP +ARD FL LE + DLC+TAAYG FLP RFL IP GTLN+HPSLLP +RGA+PVQR LEAGDA TGVTV FTVLKMDAGP+VRQ L G E+ PELL+ LF G +L+ CLP VW QD+ AA A K+S DEA F SAT +HN VRAFA WPGT S G E TD VKL T + DA G + R + + G AL C+DGSVL + ELQ ++ + A+AF NGL+G DE+ W+
Sbjct: 68 RRVVFLGTPAVAAHSLEMLLDAARPHAPDSTFEVVAVVSQPPAPAGRKKVLTNSPVHALADARGVRVLTPKSARDGAFLDELEAMGIDLCVTAAYGCFLPARFLAIPSCGTLNIHPSLLPRWRGAAPVQRTLEAGDAVTGVTVLFTVLKMDAGPIVRQRTLPLRGDEQCPELLRNLFEIGCHELLDCLPDVWSGEAAARARAQDEGAATTAPKLSKDEALGSFAAQSATQLHNAVRAFAEWPGTLVSLSVGGEPTD-----VKLCRTRLP-----ASDAAAG-----AARTRALTLDGAALVAVCADGSVLHIEELQVAGRRRVDARAFWNGLQGKDELSWL 394 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1367.2191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1367.2191.1 >prot_E-siliculosus-1a_F_contig1367.2191.1 ID=prot_E-siliculosus-1a_F_contig1367.2191.1|Name=mRNA_E-siliculosus-1a_F_contig1367.2191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=422bp MGCKRPLGAITGIYALGMRCSLAFVPSTAPHASRLASNGLHRARAAVVSTback to top mRNA from alignment at E-siliculosus-1a_F_contig1367:25142..27947- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1367.2191.1 ID=mRNA_E-siliculosus-1a_F_contig1367.2191.1|Name=mRNA_E-siliculosus-1a_F_contig1367.2191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2806bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1367:25142..27947- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1367:25142..27947- >mRNA_E-siliculosus-1a_F_contig1367.2191.1 ID=mRNA_E-siliculosus-1a_F_contig1367.2191.1|Name=mRNA_E-siliculosus-1a_F_contig1367.2191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2532bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1367:25142..27947- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |