mRNA_E-siliculosus-1a_F_contig13668.2186.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: A0A101D199_9GAMM (DNA polymerase I n=109 Tax=root TaxID=1 RepID=A0A101D199_9GAMM) HSP 1 Score: 767 bits (1980), Expect = 5.920e-271 Identity = 389/422 (92.18%), Postives = 403/422 (95.50%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPAS---AGEVESESEVSRASVQASVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
IKDYP+SPMAVVFDAPGKTFRD+MYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGL+TIYGDLERVKTL+FRGAKTLPKKLEEHR+QAFLSYQLATIK+DC+LPVGLDDLDIAHPDREALV LYKEMEFRQWL +LL+GKDEGV+D KGGEP PAS AG ESESE S ASV+AS REDH+IL QADFERWLERLQ AERFCFDLETTSLNYMDAEIVG+GLAL AGEAAYIPL HDYLDAP+QLDRK LAALKPLLEDP KTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK
Sbjct: 47 IKDYPESPMAVVFDAPGKTFRDEMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLDTIYGDLERVKTLSFRGAKTLPKKLEEHREQAFLSYQLATIKVDCELPVGLDDLDIAHPDREALVALYKEMEFRQWLSDLLEGKDEGVNDAKGGEPAPASTEKAGGSESESEGSSASVKASAREDHVILEQADFERWLERLQKAERFCFDLETTSLNYMDAEIVGIGLALQAGEAAYIPLGHDYLDAPKQLDRKAALAALKPLLEDPTKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 468
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: A0A354XIR0_HALSX (DNA polymerase I (Fragment) n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A354XIR0_HALSX) HSP 1 Score: 714 bits (1844), Expect = 7.840e-256 Identity = 363/419 (86.63%), Postives = 379/419 (90.45%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPASAGEVESESEVSRASVQASVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
+KDYP SPMAVVFDAPGKTFRD++YSDYKAHRPPMPDDLRSQI PLHACVKALGLPLLCIEGVEADDVIGTLAH ATQAGRDAVISTGDKDMAQLVN HITLVNTMK+ETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGL+TIYGDLERV TL FRGAKTLPKKLEEHR+QAFLSYQLATIK DCDLPVGLDDLDIAHPDREALV LYKEMEF+QWL ELL+G DEGVDDV GGEPV SE+ S + R DH+I QA+ E WLERL AERFCFDLETTSLNYMDAEIVG+G++L AGEAAYIP+AHDYLDAPQQLDRK VLAALKPLLEDP KTKIGQNLKYDISVLANY ISV GPFADTMLASYVLNSTATRHDMDSLALK
Sbjct: 47 MKDYPDSPMAVVFDAPGKTFRDELYSDYKAHRPPMPDDLRSQIEPLHACVKALGLPLLCIEGVEADDVIGTLAHQATQAGRDAVISTGDKDMAQLVNGHITLVNTMKEETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLDTIYGDLERVTTLGFRGAKTLPKKLEEHREQAFLSYQLATIKTDCDLPVGLDDLDIAHPDREALVELYKEMEFKQWLAELLEGNDEGVDDVAGGEPV--------SETTDSATETAPTERHDHVITEQAELEAWLERLNEAERFCFDLETTSLNYMDAEIVGIGVSLEAGEAAYIPVAHDYLDAPQQLDRKAVLAALKPLLEDPAKTKIGQNLKYDISVLANYDISVVGPFADTMLASYVLNSTATRHDMDSLALK 457
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: A0A455V6I2_9GAMM (DNA polymerase I n=1 Tax=Halomonas axialensis TaxID=115555 RepID=A0A455V6I2_9GAMM) HSP 1 Score: 713 bits (1841), Expect = 1.890e-252 Identity = 362/419 (86.40%), Postives = 379/419 (90.45%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPASAGEVESESEVSRASVQASVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
+KDYP SPMAVVFDAPGKTFRD++YSDYKAHRPPMPDDLRSQI PLHACVKALGLPLLCIEGVEADDVIGTLAH ATQAGRDAVISTGDKDMAQLVN HITLVNTMK+ETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGL+TIYGDLERV TL FRGAKTLPKKLEEHR+QAFLSYQLATIK DCDLPVGLDDLDIAHPDREALV LYK+MEF+QWL ELL+G DEGVDDV GGEPV SE+ S + R DH+I QA+ E WLERL AERFCFDLETTSLNYMDAEIVG+G++L AGEAAYIP+AHDYLDAPQQLDRK VLAALKPLLEDP KTKIGQNLKYDISVLANY ISV GPFADTMLASYVLNSTATRHDMDSLALK
Sbjct: 47 MKDYPDSPMAVVFDAPGKTFRDELYSDYKAHRPPMPDDLRSQIEPLHACVKALGLPLLCIEGVEADDVIGTLAHQATQAGRDAVISTGDKDMAQLVNGHITLVNTMKEETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLDTIYGDLERVTTLGFRGAKTLPKKLEEHREQAFLSYQLATIKTDCDLPVGLDDLDIAHPDREALVELYKQMEFKQWLAELLEGNDEGVDDVAGGEPV--------SETTDSTTETAPTERHDHVITEQAELEAWLERLNEAERFCFDLETTSLNYMDAEIVGIGVSLEAGEAAYIPVAHDYLDAPQQLDRKAVLAALKPLLEDPAKTKIGQNLKYDISVLANYDISVVGPFADTMLASYVLNSTATRHDMDSLALK 457
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: A0A3D4KRY7_HALSX (DNA polymerase I n=12 Tax=Halomonas TaxID=2745 RepID=A0A3D4KRY7_HALSX) HSP 1 Score: 693 bits (1789), Expect = 3.770e-242 Identity = 353/419 (84.25%), Postives = 381/419 (90.93%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPASAGEVESESEVSRASVQASVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
IKDYPQSPMAVVFDAPGKTFRD+++ DYKAHRPPMPDDLRSQ+A LHACVKALGLPLLCI+GVEADDVIGTLAH ATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVE KFGLPPALIID+LALMGDKVDNIPGVPGVGEKTA+GLLQGMGGGL+TIYGDLERVKTL+FRGAKTL KKLEEHR+QA+LSYQLATIK+DCDLPVGLD+LDIAHPDRE LV LYKE+EFRQWL ELL+GKDEGVDDVKGGEPV A E S+ AS Q R+DH+I+ Q++ + WL+RL++A+RFCFDLETTSLNYM+AEIVG+GLAL AGEAAYIPLAHDYLDAP QLDR VLAALKPL ED K KIGQNLKYDISVLANY I VAG ADTMLASYVLNSTATRHDMDSLALK
Sbjct: 47 IKDYPQSPMAVVFDAPGKTFRDELFEDYKAHRPPMPDDLRSQVALLHACVKALGLPLLCIDGVEADDVIGTLAHRATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEGKFGLPPALIIDYLALMGDKVDNIPGVPGVGEKTALGLLQGMGGGLDTIYGDLERVKTLSFRGAKTLSKKLEEHREQAYLSYQLATIKVDCDLPVGLDNLDIAHPDREQLVALYKELEFRQWLAELLEGKDEGVDDVKGGEPVSDDA---EETSDAQSASPQE--RQDHVIVEQSELDAWLKRLKSAKRFCFDLETTSLNYMEAEIVGIGLALDAGEAAYIPLAHDYLDAPAQLDRAKVLAALKPLFEDQKTIKIGQNLKYDISVLANYDIIVAGTLADTMLASYVLNSTATRHDMDSLALK 460
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: UPI001D0BD336 (DNA polymerase I n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0BD336) HSP 1 Score: 677 bits (1748), Expect = 5.100e-236 Identity = 344/419 (82.10%), Postives = 369/419 (88.07%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPASAGEVESESEVSRASVQASVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
IKDYP+SPMAVVFDAPGKTFRD+MYS+YK+HRPPMPDDLRSQ+ PLH CV+ALGLPLLCIEGVEADDVIGTLA HATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVE KFGLPP+LIID+LALMGDKVDNIPGVPGVGEKTAIGLLQGM GGL+TIYGDL+RVKTL FRGAKTLPKKLEEHR+QA+LSYQLATIK DC+LPVGLDDL+IAHPDRE L LY+ +EF+QWL ELLDG+DEGVDDVKGGEPV A E ++ REDH+I Q WL RL+ AERFCFDLETTSLNYM+AEIVGVGL L AGEAAYIPLAHDYLDAP QLDR VL ALKP+LED K KIGQNLKYDISVLANY I+VAGP ADTMLASYVLNSTATRHDMDSLALK
Sbjct: 47 IKDYPRSPMAVVFDAPGKTFRDEMYSEYKSHRPPMPDDLRSQVQPLHDCVRALGLPLLCIEGVEADDVIGTLAFHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEAKFGLPPSLIIDYLALMGDKVDNIPGVPGVGEKTAIGLLQGMDGGLDTIYGDLDRVKTLGFRGAKTLPKKLEEHREQAYLSYQLATIKTDCELPVGLDDLEIAHPDREKLTELYQALEFKQWLSELLDGRDEGVDDVKGGEPVADEAVE----------PAASAAREDHVITDQKTLGAWLARLRKAERFCFDLETTSLNYMEAEIVGVGLCLEAGEAAYIPLAHDYLDAPSQLDRGEVLKALKPILEDAKAVKIGQNLKYDISVLANYDITVAGPLADTMLASYVLNSTATRHDMDSLALK 455
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: A0A7Z0LJ38_9GAMM (DNA polymerase I n=1 Tax=Halomonas salicampi TaxID=1449798 RepID=A0A7Z0LJ38_9GAMM) HSP 1 Score: 675 bits (1741), Expect = 6.220e-235 Identity = 342/419 (81.62%), Postives = 368/419 (87.83%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPASAGEVESESEVSRASVQASVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
IKDYP SPMAVVFDAPGKTFRDDMY YKAHRPPMPDDLRSQ+ PLH CV +LGLPLLCIEGVEADDVIGTLAH ATQ+GRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGV+ KFGLPPALIID+LALMGDKVDNIPGVPGVGEKTAIGLLQGM GGL+TIYGDLERVKTL+FRGAKTLPKKLEEHRDQAFLSYQLATIK DCDLPVGLDDLDIAHPDRE L+ LY+ +EF+QWL ELLDG+DEGVDDV GG P+ + E ++S + R+DH+I Q + + WLERL+ AERFC DLETTSLNYM+AEIVGVGLAL GEAAYIPLAHDYLDAP QLDR VL ALKPLLED K KIGQNLKYD+SVLAN I++AGP ADTMLASYVLNSTATRHDMDSLALK
Sbjct: 47 IKDYPDSPMAVVFDAPGKTFRDDMYEAYKAHRPPMPDDLRSQVKPLHDCVTSLGLPLLCIEGVEADDVIGTLAHKATQSGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVKNKFGLPPALIIDYLALMGDKVDNIPGVPGVGEKTAIGLLQGMEGGLDTIYGDLERVKTLSFRGAKTLPKKLEEHRDQAFLSYQLATIKTDCDLPVGLDDLDIAHPDRERLLELYRTLEFKQWLAELLDGRDEGVDDVAGGAPIDDAEEEAGTQS--------PTARQDHVITEQRELDAWLERLEKAERFCVDLETTSLNYMEAEIVGVGLALEPGEAAYIPLAHDYLDAPAQLDRDAVLNALKPLLEDSTKIKIGQNLKYDMSVLANVGITLAGPLADTMLASYVLNSTATRHDMDSLALK 457
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: A0A1P8R8T9_9GAMM (DNA polymerase I n=6 Tax=Halomonas TaxID=2745 RepID=A0A1P8R8T9_9GAMM) HSP 1 Score: 674 bits (1738), Expect = 2.070e-234 Identity = 339/419 (80.91%), Postives = 369/419 (88.07%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPASAGEVESESEVSRASVQASVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
IKDYP SPMAVVFDA GKTFRD++Y++YKA RPPMPDDLRSQ+ PLHACV+ALGLPLLCIEGVEADDVIGTLA AT+AGRDAVISTGDKDMAQLVN HITLVNTMKDETLDEAGVE+KFGLPP+LIIDFLALMGDKVDNIPGVPGVGEKTA+GLLQGMGGGL+ IY DL++VKTL FRGAKTLPKKLEEHRDQAFLSYQLATIK DC+LPVGLDDL+IAHPDREAL+ LY+EMEF+ WL ELL+GKD+GVDDV GG P +++ + A+ R+D +I+ QA + WLERL AERFCFDLETTSLNYM+AEIVGVGLALA GEAAYIPL HDYLDAP QLDR VLAALKPLLEDP K KIGQNLKYDISVLANY ISV GP ADTMLASYVLNSTATRHDMDSLALK
Sbjct: 47 IKDYPDSPMAVVFDAKGKTFRDELYAEYKAQRPPMPDDLRSQVEPLHACVRALGLPLLCIEGVEADDVIGTLARRATEAGRDAVISTGDKDMAQLVNGHITLVNTMKDETLDEAGVEQKFGLPPSLIIDFLALMGDKVDNIPGVPGVGEKTALGLLQGMGGGLDAIYADLDKVKTLDFRGAKTLPKKLEEHRDQAFLSYQLATIKTDCELPVGLDDLEIAHPDREALLELYREMEFKAWLSELLEGKDQGVDDVAGGTATP--------QADSDEPAATAAARDDEVIVDQATLDAWLERLHQAERFCFDLETTSLNYMEAEIVGVGLALAPGEAAYIPLGHDYLDAPAQLDRAAVLAALKPLLEDPAKGKIGQNLKYDISVLANYQISVVGPLADTMLASYVLNSTATRHDMDSLALK 457
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: A0A7X5ANH9_9GAMM (DNA polymerase I n=6 Tax=Halomonas TaxID=2745 RepID=A0A7X5ANH9_9GAMM) HSP 1 Score: 671 bits (1730), Expect = 2.950e-233 Identity = 338/419 (80.67%), Postives = 368/419 (87.83%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPASAGEVESESEVSRASVQASVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
IKDYP SPMAVVFDAPGKTFRD+++ +YK+HRPPMPDDLR Q+ PLH CV+ALGLPLLCIEGVEADDVIGTLA AT+AGRDAVISTGDKDMAQLVNAHITLVNTMKDETLD AGV+EKFGLPP LIIDFLALMGDKVDNIPGVPGVGEKTA+GLLQGMGGGL+ IY DLE+VKTL FRGAKTLPKKLEEHRDQAFLSY+LATIK DC+LPVGLDDLDIAHPDREAL+ LY+ +EFR WL ELL+G+DEGVDD GG PVP E E + S S REDH+ILAQADF+ WLERL+ + FCFDLETTSL+YM+A+IVGVGLAL AGEAAYIPLAHDYLDAP QLDR+ VLAALKPLLED +TKIGQNLKYDISVLA Y I VAGP DTML SYVL+STATRHDMDSLALK
Sbjct: 47 IKDYPDSPMAVVFDAPGKTFRDELFEEYKSHRPPMPDDLRDQVQPLHDCVRALGLPLLCIEGVEADDVIGTLARRATEAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDVAGVKEKFGLPPELIIDFLALMGDKVDNIPGVPGVGEKTALGLLQGMGGGLDAIYADLEKVKTLGFRGAKTLPKKLEEHRDQAFLSYRLATIKTDCELPVGLDDLDIAHPDREALLELYRRLEFRAWLSELLEGRDEGVDDAAGGTPVPV-------EDERAAGSESRSPREDHVILAQADFDAWLERLKASTAFCFDLETTSLDYMEAQIVGVGLALEAGEAAYIPLAHDYLDAPDQLDREAVLAALKPLLEDGSRTKIGQNLKYDISVLAGYGIRVAGPLQDTMLESYVLDSTATRHDMDSLALK 458
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: A0A1M7HQY6_9GAMM (DNA polymerase I n=1 Tax=Halomonas subglaciescola TaxID=29571 RepID=A0A1M7HQY6_9GAMM) HSP 1 Score: 669 bits (1726), Expect = 1.350e-232 Identity = 337/419 (80.43%), Postives = 373/419 (89.02%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPASAGEVESESEVSRASVQASVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
+KDYP+SPMAV+FDAPGKTFRD++YS+YKA RPPMPDDLRSQI PLH CV+ALGLPLLCI+GVEADDVIGTLAH AT GRDAVISTGDKDMAQLVNAHITLVNTMK+ETLDEAGVE KFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTA+GLLQGM GGL+ IY DLERV TL FRGAKTLPKKLEEHRD+AFLSY+LATIKIDC+LP GLDDL+IAHPDR+ALV LY+E+EF++ LGELL+G+DEGVDD+KGG P PA+A + +SE S S R D +I Q++ + WL RLQ AERFCFDLETTSLNYM+AEIVGVGL+L AGEAAYIPLAHDYLDAP+QLDR+ VL AL PL +D KTKIGQNLKYDISVLANYAI+VA P ADTMLASYVLNSTATRHDMDSLALK
Sbjct: 47 LKDYPESPMAVIFDAPGKTFRDELYSEYKAQRPPMPDDLRSQIKPLHECVRALGLPLLCIDGVEADDVIGTLAHQATHTGRDAVISTGDKDMAQLVNAHITLVNTMKNETLDEAGVENKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAVGLLQGMNGGLDIIYADLERVTTLGFRGAKTLPKKLEEHRDKAFLSYELATIKIDCELPAGLDDLEIAHPDRDALVELYRELEFKRELGELLEGRDEGVDDIKGGTPAPANAAQ---DSEDEAGSPAPSERRDCVITTQSELDDWLARLQKAERFCFDLETTSLNYMEAEIVGVGLSLEAGEAAYIPLAHDYLDAPEQLDRRAVLEALTPLWQDTGKTKIGQNLKYDISVLANYAIAVAPPLADTMLASYVLNSTATRHDMDSLALK 462
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Match: A0A368U6F6_9GAMM (DNA polymerase I n=2 Tax=Halomonas TaxID=2745 RepID=A0A368U6F6_9GAMM) HSP 1 Score: 667 bits (1722), Expect = 8.390e-232 Identity = 342/430 (79.53%), Postives = 373/430 (86.74%), Query Frame = 1
Query: 1 IKDYPQSPMAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAHHATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALMGDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQAFLSYQLATIKIDCDLPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLDGKDEGVDDVKGGEPVPASAGEVESESEVSRASVQA-----------SVREDHIILAQADFERWLERLQNAERFCFDLETTSLNYMDAEIVGVGLALAAGEAAYIPLAHDYLDAPQQLDRKTVLAALKPLLEDPKKTKIGQNLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALK 1257
IKDYP SPMAVVFDAPGKTFRDD+Y+DYKAHRPPMPDDLRSQI PLHACVKALGLPLLCIEGVEADDVIGTLAH ATQAGR+AVISTGDKDMAQLVN HITLVNTMK+ETLD AGV+EKFGLPP LIID+LALMGDKVDNIPGVPGVG KTA+GLLQG+GGGLE IY DLE+VKTL FRGAKTLPKKLE HRDQAFLSYQLATIK DCDLPVGLDDLDIAHPDREAL+ Y+E+EF+ WLGELL+GKDEGVDDV GG+P P +A + S + + ++ S R D +IL+Q + + WL RL+ A+ FCFDLETTSLNYM+AEIVGVGLAL AGEAAYIPLAHDYLD P QLDR+ VLAALKPL E +TKIGQNLKYDISVLANYAI VAGPFADTMLASYVLNSTATRHDMDSLAL+
Sbjct: 47 IKDYPNSPMAVVFDAPGKTFRDDLYADYKAHRPPMPDDLRSQIEPLHACVKALGLPLLCIEGVEADDVIGTLAHQATQAGREAVISTGDKDMAQLVNEHITLVNTMKNETLDVAGVKEKFGLPPELIIDYLALMGDKVDNIPGVPGVGGKTALGLLQGIGGGLEAIYADLEKVKTLDFRGAKTLPKKLEAHRDQAFLSYQLATIKTDCDLPVGLDDLDIAHPDREALMKRYRELEFKAWLGELLEGKDEGVDDVAGGKPAPVAAHDGVSATLDAGSTXXXXXXXXXXXXXXSQRLDRVILSQGELDVWLARLEAADSFCFDLETTSLNYMEAEIVGVGLALEAGEAAYIPLAHDYLDVPAQLDRQAVLAALKPLWESAARTKIGQNLKYDISVLANYAIDVAGPFADTMLASYVLNSTATRHDMDSLALQ 476 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13668.2186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig13668.2186.1 >prot_E-siliculosus-1a_F_contig13668.2186.1 ID=prot_E-siliculosus-1a_F_contig13668.2186.1|Name=mRNA_E-siliculosus-1a_F_contig13668.2186.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=411bp MAVVFDAPGKTFRDDMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLback to top mRNA from alignment at E-siliculosus-1a_F_contig13668:2..1258- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig13668.2186.1 ID=mRNA_E-siliculosus-1a_F_contig13668.2186.1|Name=mRNA_E-siliculosus-1a_F_contig13668.2186.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1257bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13668:2..1258- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13668:2..1258- >mRNA_E-siliculosus-1a_F_contig13668.2186.1 ID=mRNA_E-siliculosus-1a_F_contig13668.2186.1|Name=mRNA_E-siliculosus-1a_F_contig13668.2186.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2466bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13668:2..1258- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |