mRNA_E-siliculosus-1a_F_contig1365.2182.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1365.2182.1
Unique NamemRNA_E-siliculosus-1a_F_contig1365.2182.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: D8LEF5_ECTSI (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF5_ECTSI)

HSP 1 Score: 1135 bits (2935), Expect = 0.000e+0
Identity = 562/662 (84.89%), Postives = 570/662 (86.10%), Query Frame = 1
Query:  184 MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWGVSNAADIANLTKTQPAVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFKDMKKVGLNSVRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVVRWAKDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQMDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPHDACVHPPATDWAEPLGTDGSGSGGDASLAAAQAPSGVTARVDGNAAAAVGVSNSPEEAKHGSQEGASSPGAMLGLVLLGAMAGALATFLLVRHKAASQEAEASASGGAEKGSGNRGGGWMPAVFSSGYDTIGQQSLP 2169
            MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVV+PPDGHTYDCGNMPADWGVSNAADIANLTKTQP+VALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGD+SGIRDQHSFSEKCGELGT                                                                      DAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQ+DRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFP+DACVHPPATDWAEPLGTDGSGSGGDA+L AAQAPSGVTARVDGNAAAAVGVS+SPEEA+ GSQEGASSPGAMLGLVLLGAMAGALATFLLVR KAASQ                   GWMPAVFSSGYDTIGQQSLP
Sbjct:    1 MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHTYDCGNMPADWGVSNAADIANLTKTQPSVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDDSGIRDQHSFSEKCGELGT----------------------------------------------------------------------DAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEPLGTDGSGSGGDANLVAAQAPSGVTARVDGNAAAAVGVSHSPEEAQRGSQEGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGXXXXXXXXXXXXXXXXXXGWMPAVFSSGYDTIGQQSLP 592          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: A0A836CCQ8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCQ8_9STRA)

HSP 1 Score: 815 bits (2104), Expect = 1.630e-281
Identity = 356/553 (64.38%), Postives = 437/553 (79.02%), Query Frame = 1
Query:  145 LEDQSPGNHGNAGMDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWG-VSNAADIANLTKTQPAVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFKDMKKVGLNSVRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVVRWAKDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQMDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPHDACVHPPATDWAEP 1800
            ++ Q+ GNHGNAG+ P +  C LDPKLT + LPFFIPDI+  WGS CGRNRGVFV +PPDGHTY C ++P  WG  +N  ++ N T     VA++   N V +VY T   K AA+CDF+G++ L CGRE+PW+ APWYD LKAPIRAVNIGGLFVLERWI+P F  WG+ +GI DQHSFS KCG+LG CE +K HWKN+YT QDF DMK +GLNS+RLPVGWWYFA    +++APYI+PDEDLY   HPIT V++WA DAGL VILDLHGAPG QNGLDNSGLTSPDPN +VWGE W+YSP + GNTV+ LAA+++YINHI+D+  LDNIMALELLNEPWA LD+ RVRDFYV++I AVRLVRP +P+ IHDSFRG  W TL+K+FPY D+ MD+H+YHGFNP+D +SDT   DRQKMY HERM+C Y SMLRYQTC+ +PV V EWSLA+DNCMP+LD K  D+GQC+H+AER   SWW+ H RSFA RQ+  +E+EMGW+FW WKL++   K++P++ +WSF +AV  G+ID  +P DAC+HPPA DWA P
Sbjct:   41 IQTQTTGNHGNAGIGPKNQHCVLDPKLTPETLPFFIPDIRQAWGSLCGRNRGVFVTDPPDGHTYSCNDLPERWGPAANVNEVLNQTLVPANVAVETIENIVKSVYFTNPTKDAASCDFEGISTLLCGREDPWKRAPWYDTLKAPIRAVNIGGLFVLERWILPAFVDWGEPTGIIDQHSFSVKCGDLGICEDIKAHWKNFYTAQDFHDMKSMGLNSIRLPVGWWYFAKYANINSAPYIIPDEDLYSLDHPITRVLKWAHDAGLQVILDLHGAPGGQNGLDNSGLTSPDPNNLVWGEAWLYSPNHMGNTVKTLAAISQYINHIDDNHNLDNIMALELLNEPWAFLDIARVRDFYVSAIEAVRLVRPHLPVFIHDSFRGNAWPTLLKDFPYPDVFMDSHLYHGFNPSDAASDTPSMDRQKMYTHERMSCGYGSMLRYQTCSTVPVAVLEWSLAIDNCMPYLDPKKQDYGQCNHVAERLTDSWWTSHIRSFASRQIAVFEKEMGWSFWCWKLDEQAMKSDPSAAFWSFKLAVHKGYIDTRYPSDACMHPPAEDWAVP 593          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: A0A6H5JTP7_9PHAE (GH5 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP7_9PHAE)

HSP 1 Score: 753 bits (1944), Expect = 1.370e-262
Identity = 374/404 (92.57%), Postives = 380/404 (94.06%), Query Frame = 1
Query:  919 AGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQMDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPHDACVHPPATDWAEPLGTDGSGSGGDASLAAAQAPSGVTARVDGNAAAAVGVSNSPEEAKHGSQEGASSPGAMLGLVLLGAMAGALATFLLVRHKAASQEAEASASGGAEKGSGNRGGGWMPAVF 2130
            AGLYVILDLHGAPGSQNGLDNSG TSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVM          ADLSSDTAVGDRQK+YVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHL EREG+SWWSEHTRSFAMRQ+DRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFID DFP DAC+HPPATDWAEPLGTDGSGSGGDA+LAAAQAPSGVTARVDGNAAAAV VSNSPEE   GSQ+GASSPGAMLGLVLLGAMAGALATFLLVR KAASQ A ASASGGAEK  GNRG GWMPAVF
Sbjct:    6 AGLYVILDLHGAPGSQNGLDNSGFTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVM----------ADLSSDTAVGDRQKIYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLTEREGNSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDTDFPEDACIHPPATDWAEPLGTDGSGSGGDANLAAAQAPSGVTARVDGNAAAAVEVSNSPEEPMRGSQKGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGASASASGGAEKRGGNRGAGWMPAVF 399          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: A0A4D9D2R7_9STRA (Cellulase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2R7_9STRA)

HSP 1 Score: 709 bits (1830), Expect = 2.980e-241
Identity = 305/535 (57.01%), Postives = 400/535 (74.77%), Query Frame = 1
Query:  205 CKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWGVSNAADIANLTKTQPAVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFKDMKKVGLNSVRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVVRWAKDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQMDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPHDACVHPPATDWAEPLGT 1809
            C+LDPK+T   +  F  +I   WG ACGRNRGVF++EP DG TYDCGN+P  WG+ N   + +L   QPA A+ A  N++ AVYN+T+ K  +ACDF+ L  LTCGREEPWRT PWY+++K PIRAVNIGGLFVLE+WI+P F +WG+E+GI DQ++FS +C ++  C+QLK HW+ WY+  DF  MKK GLN++RLPVG+WYFA +  ++ APY+VPD+DL+DAHHPIT+V+RWA +AGL VILDLHGAP SQNGLDNSG  + DPN   WGETW+Y       TV+IL++MA YI  + +   LDN+M LEL+NEPW  LD+G VRDFY+ +I++VR V P MPI++HDSF G MWA ++K FP+ ++ MDTHIYHGFNP+D++SD+   D+QKMYVHERM+C+ TSMLRY+TC+  P + GE+SLA+DNCM  +D KF ++GQCD +A R    WW +H RSFA RQMD YERE+GW+FWT+KL+ H E    ++  WSF +AV+ G+ID  +P  AC + P  DW +   T
Sbjct:    3 CRLDPKVTASTILDFQTEIGELWGGACGRNRGVFILEPADGKTYDCGNLPESWGIPN---VGSLLSAQPAKAVTALTNYISAVYNSTVVKGPSACDFNALAYLTCGREEPWRTVPWYNKIKNPIRAVNIGGLFVLEQWILPGFVTWGEETGIWDQYTFSSECKKMDICDQLKQHWETWYSADDFLQMKKFGLNTIRLPVGYWYFAERVGLNPAPYLVPDQDLFDAHHPITNVIRWADEAGLQVILDLHGAPYSQNGLDNSGRMTDDPNVHNWGETWLYDETAISETVQILSSMALYIKFLSEEQDLDNVMMLELVNEPWVFLDMGMVRDFYILAISSVRAVLPDMPILLHDSFHGDMWAMMLKYFPFDNVYMDTHIYHGFNPSDIASDSYQADKQKMYVHERMSCAMTSMLRYETCSAAPTITGEFSLAIDNCMDAIDRKFQNYGQCDRIARRSTDPWWKDHIRSFAHRQMDVYERELGWSFWTYKLDKHAETTAESAPLWSFRLAVKEGYIDTSYPPHACRYDPVADWQDKAST 534          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: A0A6T6YDK2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6YDK2_9EUKA)

HSP 1 Score: 478 bits (1231), Expect = 2.030e-151
Identity = 234/552 (42.39%), Postives = 327/552 (59.24%), Query Frame = 1
Query:  178 AGMDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWGVSNAADIANLTKTQPAVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCG--REEPWRTAPWYDQL-KAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGELGT--CEQLKDHWKNWYTPQDFKDMKKVGLNSVRLPVGWWYFAAKTAMSAAPYIVPDEDLY-DAHHPITDVVRWAKDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKN--FPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLD------SKFADFGQCDHLAEREGSSWWSEHTRSFAMRQMDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPHD-----ACVHP 1776
            AG+      CKL P++T +++  +  ++   WGSACG NRGVF +    G T+ CG +P +W   N           P   L+  G ++  V+NTT G   ++CDF G+  L CG  R  PWR  PW   L   PIR VN+G LFVLE WI P FT WGD+  IRDQ+++     +      + L+ HW  +YT +DFK M + GLN  R+PVGWWYF     +   PY VP  D+  D  HPIT V+R+A+  G+ VILDLHGAPGSQNGLDNSG+ S DP    WG+ W Y  +   +TV+IL  M  YIN +  +  +DN++ LEL+NEPW   D+  VR+FY+ +IT +R +   +P+++ D+FR   W  L+++  F + ++ MDTH+YH FNP+D++SD    D  K      MAC Y S+LRY+TC+ LP + GEWSLA+D+CM +L       ++F DFGQC  L  R  +  W+   + F+ RQ   +E+E+GW FW WK++D   K+  A KYWS++ AVEH +   D   +     AC HP
Sbjct:   98 AGVLFSEMSCKLSPRVTPENIDDYRDNLGQIWGSACGLNRGVFTLADYPGKTFTCGVLPQEWNAPNGVADLFAGGRDPKADLEYLGMYLGGVFNTTAGIGPSSCDFKGVAQLWCGEHRHYPWRFTPWAKLLGNKPIRGVNVGSLFVLEPWIAPGFTEWGDD--IRDQYTYCVSGNQTDDEKIKALEHHWATFYTEEDFKLMSEYGLNVARIPVGWWYFGEAAGLDPKPYFVPKNDIQTDLDHPITKVIRYAQKYGIQVILDLHGAPGSQNGLDNSGIRSMDPIAERWGDHWFYEQKYRDDTVKILGVMTHYINMLNKN-NIDNVIMLELMNEPWVFGDMSIVRNFYIEAITKIRKINSTLPMLVCDAFRHEEWHWLLRSRGFSFDNVYMDTHLYHAFNPSDVASDNPHDDMMKQITASNMACGYGSLLRYKTCSSLPTLTGEWSLAIDDCMKFLTGSTHSANQFKDFGQCKDLESRT-TDQWTTLVKDFSRRQRAVFEKELGWIFWAWKVDDVANKDISA-KYWSYTKAVEHEYFPKDLEKEPKVVLACDHP 644          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: A0A7S2XF99_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XF99_9EUKA)

HSP 1 Score: 473 bits (1217), Expect = 6.020e-151
Identity = 237/554 (42.78%), Postives = 333/554 (60.11%), Query Frame = 1
Query:  178 AGMDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWGVSNAADIANLTKT-QPAVALKAY-GNFVDAVYNTTIGKTAAACDFDGLTVLTCGREE--PWRTAPWYDQL-KAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSF--SEKCGELGTCEQLKDHWKNWYTPQDFKDMKKVGLNSVRLPVGWWYFAAKTAMSAAPYIVPDEDLY-DAHHPITDVVRWAKDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKN--FPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLD------SKFADFGQCDHLAEREGSSWWSEHTRSFAMRQMDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPHDA-----CVHP 1776
            AG+      C+L  ++  +++  +  ++   WGSACG NRG+F +    G T++CG +P DW   N   +++L K  +  +A   Y  +++  V+NTT G   ++C F  L  L CG +   PWR  PW  +L   P+R VN+GGLFVLE WI P F  WGDE  IRDQ+++  +E         +LKDHW ++Y+  DFK M K G+N+ R+PVGWWYFA  T +    YI PD D+  D  HPIT V+ WA    + +ILDLHGAPGSQNGLDNSG+ S DP+   WG+ W +S +    TV  L  M  YIN +  + GL N++ LEL+NEPW   D+  VRDFYV ++T +R +   +PI++ D+FR   W  L++   F +++I MDTH+YH FNP+D++SD    D  K      MAC Y S+LRY+TC+ LP M GEWSLA+D+CM +L       ++F DFGQC +L ER  +  W+   + FA RQ   +E+E+GW FWTWK++    K+  A   WS+SMAVE G+   +   +A     C HP
Sbjct:   26 AGVLFSEMSCRLSKRVNAENIVSYQDNLGQIWGSACGLNRGIFTLAKYPGKTFNCGKLPEDWNAPNG--VSDLFKPGRDMIADLGYLDDYMGGVFNTTAGIGPSSCAFQNLAHLWCGEKRFMPWRRTPWASRLGHKPLRGVNLGGLFVLEPWICPGFADWGDE--IRDQYTYCKNESVSLSTKTNKLKDHWASFYSEDDFKLMSKYGINTARMPVGWWYFAEATGLDPLHYITPDNDIMVDMDHPITKVISWAYKHNIQIILDLHGAPGSQNGLDNSGIRSMDPDAERWGDNWFFSEDFREMTVMTLKTMTHYINMLNKN-GLSNVIMLELMNEPWVFGDMSVVRDFYVDAVTEIRKINNTLPILVCDAFRHDEWHWLLRRRGFSFENIYMDTHLYHAFNPSDVASDNPHDDMMKQITASDMACGYGSLLRYKTCSSLPTMTGEWSLAIDDCMKFLTGSTSSANQFTDFGQCKNLKERN-TPQWTALIKDFAARQRAVFEKELGWVFWTWKVDKEASKDISAP-LWSYSMAVEAGYFPDNLNTEADVTKGCDHP 572          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: A0A6H5JXP3_9PHAE (GH5 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP3_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 4.930e-119
Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 1
Query:  184 MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWGVSNAADIANLTKTQPAVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGEL 699
            MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWGVSNAADIANLTKT+PAVALKAYGNFVDAVYNTTIGKTA ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGEL
Sbjct:    1 MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWGVSNAADIANLTKTKPAVALKAYGNFVDAVYNTTIGKTAEACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGEL 172          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: A3LX35_PICST (Glucan 1,3-beta-glucosidase (Exo-1,3-beta-glucanase) n=1 Tax=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) TaxID=322104 RepID=A3LX35_PICST)

HSP 1 Score: 197 bits (501), Expect = 3.440e-51
Identity = 133/406 (32.76%), Postives = 205/406 (50.49%), Query Frame = 1
Query:  544 APWYDQLKAPIRAVNIGGLFVLERWIVPT----FTSWGDESGIR-DQHSFSEKCGELGTCEQLKDHWKNWYTPQDFKDMKKVGLNSVRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVVRWAKDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGN-TVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHL-DLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGP-MWATLM--KNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYT--SMLRYQTCAVLPVMVGEWSLAVDNCMPWLD-----SKFADFGQCDHLAE-------REGSSWWSEH---TRSFAMRQMDRYEREMGWAFWTWKLEDHLE 1680
            A W D     IR VN+GG FVLE +I P+    + +WGD+S +  D++ +++K G+L   ++L  HWK WYT QDF D+   GLN VR+P+G+W F     +   PY+    +  D        + WA   GL V +DLHGAPGSQNG DNSGL           +T  Y   NN   T+ +L  + E   + E S   + ++ +ELLNEP   + D+  +++F       +R    + P+IIHD+F+ P  W   +  +N  Y  +V+D H Y  F+  +L+ D        +  H  +AC++   S   Y        + GEWS A+ +C  WL+     +++A  GQ D+ A         +  +W  ++    R +   Q+D +E+  GW FW WK E+ +E
Sbjct:   44 ASW-DYQNDVIRGVNLGGWFVLEPYITPSLFEQWENWGDDSQVPVDEYHYTQKLGKLVAGQRLDTHWKTWYTEQDFSDIAAAGLNFVRIPIGYWAFQL---LDNDPYVQGQVEYLD------QALGWANKYGLKVWIDLHGAPGSQNGFDNSGLR----------DTVQYQQPNNVQVTLNVLEQIFEKYGNGEYS---NYVIGIELLNEPLGPVSDMNNLKNFLTQGYNNLRQTGSVTPVIIHDAFQAPGYWDNFLTVENGDYWSVVIDHHHYQVFSYGELARD--------IDQHISVACNWAWDSKKEYHWN-----VAGEWSAALTDCAKWLNGVGRGARYA--GQYDNSAYIGDCTPYLDLGTWTQDYKTNVRKYIEAQLDGFEQTGGWVFWNWKTENAVE 411          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: S3CDJ0_GLAL2 ((Trans)glycosidase n=2 Tax=Glarea lozoyensis TaxID=101852 RepID=S3CDJ0_GLAL2)

HSP 1 Score: 196 bits (498), Expect = 6.440e-51
Identity = 144/442 (32.58%), Postives = 201/442 (45.48%), Query Frame = 1
Query:  481 AACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPT-FTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFKDMKKVGLNSVRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVVRWAKDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEP--WAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPM-WATLMK-NFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWL---------DSKFAD-----FGQCD--HLAEREGSSWWSEHTRSFAMR-QMDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFI 1740
            AAC    +      R   W     YD  K  +R VN+GG FVLE WI P+ F  W +  G+ D+++++   G+     +L  HW  + T  DFK++   GLN VR+PVG+W   A     A PY+       D      + +RWA++AGL V+LDLHGAPGSQNG DNSG          +G     S +N  NT   L A+   +N   +    D + A+ELLNEP  W + D+G V+ FY      VR       ++IHD+F  P  W   M       D+++DTHIY  F+  +++         K   H + AC+  S  R Q      + VGEW+ A  +C  WL         D  F       +G C   +    +G     +   ++ +  Q+D YE   GW FWTWK E   E        W F      G I
Sbjct:   11 AACSSVAIANPVKERANTWN----YDNQK--VRGVNLGGWFVLEPWITPSLFEQWANGGGVVDEYTYTAALGKQNAQSRLTQHWSTFITEGDFKEIASFGLNHVRIPVGYW---ALNPNPADPYVQGQLPFLD------NAIRWARNAGLRVMLDLHGAPGSQNGFDNSGK---------YGAINWQSGDNVANT---LTAIQNLVNRYRND--QDVVTAIELLNEPANWGN-DMGLVKKFYYDGWGNVRTTSSNTAVVIHDAFLDPQSWNGFMGYGSGVNDVILDTHIYQIFSQGEVA--------MKPCQHVQTACA--SAGRIQNTDKWTI-VGEWTGAQTDCARWLNGLGKGARYDGTFPQGSSGYYGSCQNKYTGTVDGMLQVDKTNLAYYVEAQLDAYESHSGWVFWTWKTETAPE--------WHFQNLTRAGLI 403          
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Match: A0A2T3AR05_AMORE (Glycoside hydrolase family 5 protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3AR05_AMORE)

HSP 1 Score: 194 bits (493), Expect = 2.630e-50
Identity = 133/412 (32.28%), Postives = 184/412 (44.66%), Query Frame = 1
Query:  574 IRAVNIGGLFVLERWIVPT-FTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFKDMKKVGLNSVRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITD-VVRWAKDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEP--WAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPM--WATLMKNFP-YKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDS-------------KFADFGQCDHLAEREGSSWWS---EHTRSFAMRQMDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFI 1740
            +R VN+GG FVLE WI P+ F  W +  G+ D+++F++  G      QL+ HW NW T  DF ++  +GLN VR+P+G+W   A   +   PY+           PI D  + WA+ AGL V++DLHGAPGSQNG DNSG   P    I W +      +    T+  +  +A    +  D+   D + A+ELLNEP  WA +D+  ++ FY      VR       + IHD+F   +  W   M       D+++DTHIY  F   D++         K   H + ACS  S L       +   VGEW+ A  +C  WL+                  +G C    E            +   F   QMD YE   GW FW WK E   E        W F      G I
Sbjct:   31 VRGVNLGGWFVLEPWITPSLFAPWANGGGVVDEYTFTQALGPTAAQNQLEAHWNNWITQDDFNEIASMGLNHVRIPIGYW---AINPLPGDPYV-------QGQLPILDNAIGWARSAGLKVMIDLHGAPGSQNGFDNSGRYGP----IDWQQG-----DTTSETLTAIQNLA--YRYAGDT---DVVTAIELLNEPANWA-IDMAALKQFYYDGWGNVRNANAYTAVTIHDAFEDVVSYWNGFMNTQAGVNDVILDTHIYQIFTDDDVA--------MKPCDHVQAACSQASNLASTDKWTI---VGEWTGAQTDCAKWLNGLGKGARYDGTLSGSTGYYGDCQTKYEGTVDGLLDVDKTNLEYFVEAQMDAYEAHSGWIFWAWKTESAPE--------WHFQNLTRAGLI 398          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1365.2182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEF5_ECTSI0.000e+084.89Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocar... [more]
A0A836CCQ8_9STRA1.630e-28164.38Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A6H5JTP7_9PHAE1.370e-26292.57GH5 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A4D9D2R7_9STRA2.980e-24157.01Cellulase domain-containing protein n=2 Tax=Monodo... [more]
A0A6T6YDK2_9EUKA2.030e-15142.39Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S2XF99_9EUKA6.020e-15142.78Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A6H5JXP3_9PHAE4.930e-11998.84GH5 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP... [more]
A3LX35_PICST3.440e-5132.76Glucan 1,3-beta-glucosidase (Exo-1,3-beta-glucanas... [more]
S3CDJ0_GLAL26.440e-5132.58(Trans)glycosidase n=2 Tax=Glarea lozoyensis TaxID... [more]
A0A2T3AR05_AMORE2.630e-5032.28Glycoside hydrolase family 5 protein n=1 Tax=Amorp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1365contigE-siliculosus-1a_F_contig1365:5547..19997 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size2124
Model size3400
Exons16
Ec32 orthologEc-00_002090.1
Ec32 ortholog descriptionExo-1,3-beta-glucanase, family GH5
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2CIRD@1,2S847@2759
Seed eggNOG ortholog2880.D8LEF5
Seed ortholog evalue0.0
Seed ortholog score1141.3
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1365.2182.1prot_E-siliculosus-1a_F_contig1365.2182.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1365 6775..19949 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927881.696147-UTR-E-siliculosus-1a_F_contig1365:5546..67741622927881.696147-UTR-E-siliculosus-1a_F_contig1365:5546..6774Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1365 5547..6774 -
1696318720.9330523-UTR-E-siliculosus-1a_F_contig1365:5546..67741696318720.9330523-UTR-E-siliculosus-1a_F_contig1365:5546..6774Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1365 5547..6774 -
1622927882.093851-UTR-E-siliculosus-1a_F_contig1365:19949..199971622927882.093851-UTR-E-siliculosus-1a_F_contig1365:19949..19997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1365 19950..19997 -
1696318721.1507869-UTR-E-siliculosus-1a_F_contig1365:19949..199971696318721.1507869-UTR-E-siliculosus-1a_F_contig1365:19949..19997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1365 19950..19997 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927881.7170134-CDS-E-siliculosus-1a_F_contig1365:6774..68141622927881.7170134-CDS-E-siliculosus-1a_F_contig1365:6774..6814Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 6775..6814 -
1696318720.9438796-CDS-E-siliculosus-1a_F_contig1365:6774..68141696318720.9438796-CDS-E-siliculosus-1a_F_contig1365:6774..6814Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 6775..6814 -
1622927881.7356834-CDS-E-siliculosus-1a_F_contig1365:7595..78131622927881.7356834-CDS-E-siliculosus-1a_F_contig1365:7595..7813Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 7596..7813 -
1696318720.9523354-CDS-E-siliculosus-1a_F_contig1365:7595..78131696318720.9523354-CDS-E-siliculosus-1a_F_contig1365:7595..7813Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 7596..7813 -
1622927881.7562726-CDS-E-siliculosus-1a_F_contig1365:8430..86661622927881.7562726-CDS-E-siliculosus-1a_F_contig1365:8430..8666Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 8431..8666 -
1696318720.961653-CDS-E-siliculosus-1a_F_contig1365:8430..86661696318720.961653-CDS-E-siliculosus-1a_F_contig1365:8430..8666Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 8431..8666 -
1622927881.7849848-CDS-E-siliculosus-1a_F_contig1365:9184..93391622927881.7849848-CDS-E-siliculosus-1a_F_contig1365:9184..9339Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 9185..9339 -
1696318720.9795535-CDS-E-siliculosus-1a_F_contig1365:9184..93391696318720.9795535-CDS-E-siliculosus-1a_F_contig1365:9184..9339Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 9185..9339 -
1622927881.806716-CDS-E-siliculosus-1a_F_contig1365:9955..100931622927881.806716-CDS-E-siliculosus-1a_F_contig1365:9955..10093Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 9956..10093 -
1696318720.9913614-CDS-E-siliculosus-1a_F_contig1365:9955..100931696318720.9913614-CDS-E-siliculosus-1a_F_contig1365:9955..10093Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 9956..10093 -
1622927881.8374023-CDS-E-siliculosus-1a_F_contig1365:10787..108221622927881.8374023-CDS-E-siliculosus-1a_F_contig1365:10787..10822Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 10788..10822 -
1696318721.0006702-CDS-E-siliculosus-1a_F_contig1365:10787..108221696318721.0006702-CDS-E-siliculosus-1a_F_contig1365:10787..10822Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 10788..10822 -
1622927881.859373-CDS-E-siliculosus-1a_F_contig1365:11450..114801622927881.859373-CDS-E-siliculosus-1a_F_contig1365:11450..11480Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 11451..11480 -
1696318721.010028-CDS-E-siliculosus-1a_F_contig1365:11450..114801696318721.010028-CDS-E-siliculosus-1a_F_contig1365:11450..11480Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 11451..11480 -
1622927881.8830426-CDS-E-siliculosus-1a_F_contig1365:12015..121651622927881.8830426-CDS-E-siliculosus-1a_F_contig1365:12015..12165Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 12016..12165 -
1696318721.0259635-CDS-E-siliculosus-1a_F_contig1365:12015..121651696318721.0259635-CDS-E-siliculosus-1a_F_contig1365:12015..12165Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 12016..12165 -
1622927881.9107924-CDS-E-siliculosus-1a_F_contig1365:12594..127501622927881.9107924-CDS-E-siliculosus-1a_F_contig1365:12594..12750Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 12595..12750 -
1696318721.0371172-CDS-E-siliculosus-1a_F_contig1365:12594..127501696318721.0371172-CDS-E-siliculosus-1a_F_contig1365:12594..12750Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 12595..12750 -
1622927881.9304597-CDS-E-siliculosus-1a_F_contig1365:13189..132891622927881.9304597-CDS-E-siliculosus-1a_F_contig1365:13189..13289Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 13190..13289 -
1696318721.05658-CDS-E-siliculosus-1a_F_contig1365:13189..132891696318721.05658-CDS-E-siliculosus-1a_F_contig1365:13189..13289Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 13190..13289 -
1622927881.9495225-CDS-E-siliculosus-1a_F_contig1365:14442..146361622927881.9495225-CDS-E-siliculosus-1a_F_contig1365:14442..14636Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 14443..14636 -
1696318721.0650704-CDS-E-siliculosus-1a_F_contig1365:14442..146361696318721.0650704-CDS-E-siliculosus-1a_F_contig1365:14442..14636Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 14443..14636 -
1622927881.9756932-CDS-E-siliculosus-1a_F_contig1365:15251..154351622927881.9756932-CDS-E-siliculosus-1a_F_contig1365:15251..15435Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 15252..15435 -
1696318721.0743668-CDS-E-siliculosus-1a_F_contig1365:15251..154351696318721.0743668-CDS-E-siliculosus-1a_F_contig1365:15251..15435Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 15252..15435 -
1622927881.9966846-CDS-E-siliculosus-1a_F_contig1365:16021..160871622927881.9966846-CDS-E-siliculosus-1a_F_contig1365:16021..16087Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 16022..16087 -
1696318721.0943432-CDS-E-siliculosus-1a_F_contig1365:16021..160871696318721.0943432-CDS-E-siliculosus-1a_F_contig1365:16021..16087Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 16022..16087 -
1622927882.0177739-CDS-E-siliculosus-1a_F_contig1365:16755..168881622927882.0177739-CDS-E-siliculosus-1a_F_contig1365:16755..16888Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 16756..16888 -
1696318721.1160219-CDS-E-siliculosus-1a_F_contig1365:16755..168881696318721.1160219-CDS-E-siliculosus-1a_F_contig1365:16755..16888Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 16756..16888 -
1622927882.0435224-CDS-E-siliculosus-1a_F_contig1365:17450..176371622927882.0435224-CDS-E-siliculosus-1a_F_contig1365:17450..17637Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 17451..17637 -
1696318721.1274161-CDS-E-siliculosus-1a_F_contig1365:17450..176371696318721.1274161-CDS-E-siliculosus-1a_F_contig1365:17450..17637Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 17451..17637 -
1622927882.0608141-CDS-E-siliculosus-1a_F_contig1365:19847..199491622927882.0608141-CDS-E-siliculosus-1a_F_contig1365:19847..19949Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 19848..19949 -
1696318721.140731-CDS-E-siliculosus-1a_F_contig1365:19847..199491696318721.140731-CDS-E-siliculosus-1a_F_contig1365:19847..19949Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1365 19848..19949 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1365.2182.1

>prot_E-siliculosus-1a_F_contig1365.2182.1 ID=prot_E-siliculosus-1a_F_contig1365.2182.1|Name=mRNA_E-siliculosus-1a_F_contig1365.2182.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=708bp
MLERPMRMVNQNSILALLLAAASTVPAEAGFVLEDQSPGNHGNAGMDPGS
FRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGN
MPADWGVSNAADIANLTKTQPAVALKAYGNFVDAVYNTTIGKTAAACDFD
GLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGD
ESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFKDMKKVGLNSVRLP
VGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVVRWAKDAGLYVILDLH
GAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYIN
HIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPII
IHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMY
VHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCD
HLAEREGSSWWSEHTRSFAMRQMDRYEREMGWAFWTWKLEDHLEKNEPAS
KYWSFSMAVEHGFIDLDFPHDACVHPPATDWAEPLGTDGSGSGGDASLAA
AQAPSGVTARVDGNAAAAVGVSNSPEEAKHGSQEGASSPGAMLGLVLLGA
MAGALATFLLVRHKAASQEAEASASGGAEKGSGNRGGGWMPAVFSSGYDT
IGQQSLP*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1365:5547..19997-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1365.2182.1 ID=mRNA_E-siliculosus-1a_F_contig1365.2182.1|Name=mRNA_E-siliculosus-1a_F_contig1365.2182.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=14451bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1365:5547..19997- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGCAGAGCCTCCCGCGCCGCGGGTGTGCACAAGCAAAGAGGGATCTGCAT GCTCGAGAGGCCCATGAGGATGGTTAACCAGAACAGTATCCTAGCGCTGC TGCTTGCTGCCGCTAGTACGGTGCCGGCGGAAGCGGGCTTTGTCCTTGAG GTACGCCAAGAACGTCTACCCGTTGGTGCAAGGAATGTCTACTCGTTGTT TCTCCGTGAGAAGCATGTGTTTGGGTGTCGACGCGCCCAATTTTGAGCAA GTACGAAAATGCATGCAGGGTAGGTAGCAACCCTAATTTTGGTGTCCGAC AAACGTCCGCTATAGTGCTGCTGTTGGGAGACCTGTATTGCGTCATCATA TGCAAATGGTCTGCAAATGTTTCAACGAGACCCTTAGTTGCATGCGTTGC GTATGTAGAGGGGAGGCGCCAGATGCTTTCTTTGGATCACATCGATCGGA CAGTTGTTGACATTTTTCTCGCGTCTAGTACTATATGTTGGGTGGGTGGA AGACACATGTTTTTCCTCGACGGCGGCGTCTCCTCTCCTCTTGGACGCAC GCACGCTCGTTTGGTGTTGTAACGCTGTGCCTACCCCGAGATCAAGCGGA AAGCAAGCGGTGCAAGGACAGAGCGCAGGATAAAATCTCAACTTCCAAAT GCAGCTCAGAGGTCGGAAGCGTGAGGACGTCCATGTTGGTAGATACTTGA TTGCTGTCGATCATGTCCGATTGCATCTGTCCTCCCTCGTCGCTCTATCT TTGTGCAGCGAGATGCATCTTCTTTCTTGATGCGTTAATGCAACGTGGTC ATGGGTTGCAGCTTTGCGTGTACTTTGGTAGAATATCTATCTATGGATGG TGACGCGCGGTGCAGTGGCATCACCTGGAACAAGTGACGCGCCCCGCTGG TCTCTCCAAAGTGTAGGAGTACATCCTTACGAGAGCGGGCGAATGCACAG AGCGTGTGACAGATTTCGTGAGATTGATCGATCCACAACCACGAGAGGAT GCTATCGAAACCATCGGGCATGTGTACAAGGTACAAGGACTGCTCTCGGC GAGATCTTTCACAAACCACCCTGGTGCCGGCACCGTATGTAGCCAGCCCC CTGGTCATGGAGCAATCAAGCATTCAAAGTGAAATAGGACAAGAAAACTG GGTACTGCTGTACTCGGGAATTTGCTTCGCGGAGACCACTCGTGAGGGGG CCGAACCACTCGAAAATATATTCTGGAGCCTAGACAACGTGGCTAGGGTC CATGCACAGCACGAACATTTTGAACGAACTTTCGGGCCCGTCTTTGCCCA CACACACAAGGTCTCAACAAAGGTTGCCCAATTTTGTCCGAATTTCCGAT GGGCGTACATACCAACCGACAGCAGGACAGAGTAGCCGACAGAGTATGCT CCTTGTTGTACATTCTTGTCTTGTTCGGGCTCTGTGGAAATCAATCTCCC CGTCACCGCACGACTGAACTTTTCGAATGAAAGAAGTGGACAAAAGCGGG TACATGTGAACAAAAAAGAACGTGCATCAGGCACAAGTAGTGCCAGGTCA ATACCCACCAGAGTCTCCGACAAATTATCGGGCAACCTAGTGAGTCCTTT GAGCGCCGTGGCGGTGTGTGGGCTGAAGACGTGCCCGAAAGTGCGCTAAA CGTGCAGATGTTCGTGCTGTGCATGGGTCCTGACCATGTGTGGTCCAGGC ATCAGAATTTATTTGATTTTGAGAGGTTCGGCCCTCTCACGAGTGGTCTC CGCGAAGCAAATTTTCAAAATTTCGAGTACTACCCGCTGTTGTCCGAGAG AGGGGTGGGTATACCCATTTGCGTTCGTTTCCCTTTCAGAACGGAACGCA TACCTGTCAGTTCGCCCGCACTTTTACAGCTGTACCTTGATTATCACGCG TTCTTCGTCGCGGAGGGATGGACTTTTTATGTGGTTGTTGTCAGGATTTC GCCAAGCCCAGCCAACTCCCCGTGCTACAGCGGACGAGACGACACCTCGC TATGGTGTGCTAGGGGGATTGCTTGCATCTTACAGCACGTAGACTATCTA CCATACCTTACAACCGTTGTATGTTTCTCGCGATTCAGAACTCTCGAAAA TATCCAACGGTAAGTACAGACAGGAATATTCGTTGCGCGTTTTATTTTAC TCCTTGTTGGTGTGGGGGAAGTCATACAACAGCAATGCCGGCCGGCCCGC TCATATAATTCGAAGAGGTCCGTGTATGGTGGTGTAACATTTTCTTCCTT GAACCGGCTAGTGCTGTTCTTCGTCCTTCGTCGTTGATTCGCGACGAAAA GGCATTCACGACTAAATACTGCCGTTGTTCTTCGCTCTCCGTCGACCACA AAAAAAACAGGACCAATCCCCAGGCAACCACGGTAACGCCGGTATGGACC CGGGGAGCTTCCGTTGCAAGCTCGACCCTAAGCTCACTGAGAAGGACCTG CCCTTCTTCATCCCGGACATCCAGGGCACCTGGGGTTCGGCCTGCGGACG GAACCGCGGCGTTTTCGTCGTCGAGCCTCCCGATGGCCACACCTACGGTG AGACAAAGGGAGACTATATAGCTTGCGGCCGGAATAGAATTGTGGGAGTT TCGGCTGGCCCTCTCTCGGCAGCTGTCCGTGTGTGTACTTTTTTATTAGC ATCGACATCGCTAACCGGCTGACCAATGAAAAATGATCAGTCTCATTGCG GTTGAGGTCGTGTGTGTGTGATGGGTCAAGTTTCGCGGTGTCTGTTGTAT GGCAGGACCAATAAGAAAAATGTGTTCGATTCTCTCGGTCTACAGTGGTA GGATTCACCCGAGGCCACATCTATGATCGAGAGACGGTTCTCCTGCGGGA AGCCGTCCGTGGGTCGTCGCACACCCGCATGAGGCTCGTGCCCCAGACCA CCACCCCCGCCCCGCCCCCGGGGGGGTTACGTATTCATGAGCTCGGCGGG GTGTTGTCGACGAAGTAACTGCGCAAGCATAGCTACCCGCGCGTGCGCCA GCTGTGGGACCCCCGTGCAATACCCCCGACGACTGGCGCCACAAGAGCAG CGAAGCCACGCAAAGTTCCGATGGCCCGTTTTTTTACACGCGTGAAATCA CTTGCGCAGATTGCGGCAACATGCCTGCCGATTGGGGGGTGTCTAACGCC GCCGACATCGCTAACCTGACCAAGACCCAGCCGGCTGTCGCCCTGAAGGC CTACGGTAACTTCGTCGATGCTGTCTACAACACCACCATCGGGTACGTAT TAGGAAGTACGCAAACACCCTGGATAAAGTATGGAGTAGGCTAAGTTAGA GTTACGGTTAGGGTCTGCGTGCCCCCTGCCTTGTCTTTTTTAGTAGTAGC CTTACTTTCTTTGCGTAGGCAGTCTGACGTTTTATCTGGTAAGCGGTAGG AGGCCGCTGTCGGGGGGGATGGTCTAGTGAAAAGCCGAGGCACAGTGGTC ACGCGCCCTTCTTGCGCACGTGCCTCAGCTTTTGGTCGGCAGCATCGTAA AAATTTGGCGGTAACTATTACTTGAGAGGTTCGGCGTGGAAAAAGTAATT GTTTGGCTTGAGATTTCCTGTCGTAGGACAAGAGTATGTATGCCACGGTG GCCGAGGCATTCATCTGCGAACAACCCCCCCTTGAACCTGGAAGTAGCGA TGGAGAGGGTGTACCACCTACTACACACGTTTCCACACGTGTCAGCCCTT TTCTTGCGGCGATGGTCCCGCCGCGCACCCTCATGCAGGATCGAGAACCA AAATGATTTCTGCTATGAAGCACAGCCTCCCCCACCTTCTTCTCTTGTGC CCTCTAGAACCGAACCGATGTTGCCATGACTTACAGCCTCCCCCACCCTC TTGTTCTCTTGTGCCCTCTCCTTCTCTTTGGGGGGTGACGTGTTATGGTT ATCGCCACAGGAAAACCGCGGCGGCCTGCGACTTCGACGGGCTGACGGTC CTAACGTGCGGAAGGGAAGAGCCCTGGTGAGTTACCCCGTTTGTTGGTTG TCTTGAAGTGAGTTATTGTAGTCCGTTCATAGATCATGAGTTAGTCCGTG TTTTTGTTATCTTAAATGTCGTGATCGGAATACTAAGATACTAAGGCCGA AGAGCAGAACACCATAGCGGAATCTTTGCCCGGACTGCTTTTCTACGTTT GGCTAAAAGTCGGTACCATCTTCGCCGCTTGTAGTAGCACCGGGTCGTTG GACGATAAACTTGTCAAGTAACGGTGATGACCGATTTTTCTGGTCGCTTT GAGTTCTCCATGATTTTTCGTGCTACGATAAATATGAACCCCCTTGTGTT GTTATGTAGCCTGTGACCACGAAAGGCGTCCACGTTAGTTGGACCAATCC GCAATCCGACGATTGTTTGAAGGTTCTGAGCAGAGATCGGGCCGTTTTTA TATGTGAATAACACAACAAAAACAACAACCAACAGTGGCAGCCTACGTCT CCCTGGTTCCATGGCCGGCCAGTCAATGATCTACAACTAAGACATGCAAA ATATGAGTACCCCCCCCCCCTCTCCCCCCCCGAATAAAACACGACGCCCC CAACCGTCCCAGGAGAACCGCCCCATGGTACGACCAGCTCAAAGCGCCCA TCCGGGCTGTTAACATCGGCGGTCTGTTCGTTCTGGAGCGTTGGATTGTG CCCACCTTTACCTCTTGGGGGGATGAGAGCGGCATCCGCGACCAGCACTC TTTCAGCGAGAAGTGTGGAGAGCTCGGAACGTGTGAACAGCTAAAGGTGT TTGGAGGGGGGAGGGCGGGGGGAGGGGCACAACTTAGCCGACCCGGCGTT TACCGCGGGTGTTCGTTATTGCGGTAGCCCATTCATAACCTCCTTTGCAG TGCGTACCTCCATCGTCACCTGGATGGTTCGTCGATGCGGTGGATAGACA ACCCTCGTAGGAGTTATGTAGTTGGACCAAAGGCGTGTCGATGGAGAGAA AAAAGCACACCCTGCCGCCGCAATCGAACCCAAAGACGCAAGACGTGGAG AAAGAAAAAGCTCTCGGGAAGAGAAGAACACCTCACACAGGTACTGAGTA AAAGCCTCCTTTCGTCTGGAGCACGCTTGTTTTGGGGGCCAGAAAAACAA GGTGCAATACAACATAAGTAGACACGTCTACGCTTTTGGTGTAAATAGTT GTCCTTCCTTTCTGTCTTTCGCCATGAGACTTGACACTTTTTTTATGAAT AAGAGCACGCGTTACACAAGGAAATATCGCTTTTGAACAAGCCCTCATTG TGCACGGGGAGACAAGAAACGAAGGGTCGCGCACATGCCCCCCCCCCCCC CAACAGAACCGACAAAGTACCACCCACGCCCCCCCCACCCCGTTGTTTCT TTCCCTCCCAGGACCACTGGAAGAACTGGTACACCCCTCAGGACTTCAAG GACATGAAGAAGGTTGGCCTGAACAGCGTCCGCCTTCCGGTAGGGTGGTG GTACTTCGCCGCCAAGACGGCCATGTCGGCCGCCCCTTACATCGTGCCCG ACGAAGACCTCTACGACGCGCACCACCCCATCACCGACGTGGTTCGCTGG GCCAAGTGAGAGAAGAGGGGGGTGTTGTCTAACGTAGCGTGGTTCTCTGT TTGGTGGTGCCGTGTGGATGTTGATCAATACGCCCTCCGCCCTTTTCGAG AGGAAAAGGAGAAGGAGGGGGGGGGGGGGGGTACTCATAGTCGTGCATGC CATAGTCGTTAGACCAATGACCTCGCATCTCTACAAAGCCGGGACGGAGC ACGCCGGGTTCGCACCGGACCAGGCTCTCACATCACCAAGCGCGAAGCGC CGTGAGGTATTCGGCGAGTCGCATGAAGGGTGCGCTGCATCCCGCTAAGG GTGTTCGGCATCTTGTACTTGCTTCCTTGCGTACGAATGGCAGCTGCGAA TGACTTAATATATTTTCTGGTGCTATCACTTCCAGAGACAGTTGTAAGCA CTGTGTAACTGCCTCGAGGATGCTTGACCACTTTAACACAACGTGGTGCG ATCATCCCCCTTGCGCGGAGAGAGGGTTGTCGACCCGCACAACATGATCT ACTCGACCACCATTCATATTCATGGTTACCGCAAAAAAAAGAAACAGAGG TAAAAAGAAAACGGTAACCTGGTTTCAGAGTTCACGAAGTGACTTGGCTT GTTTTACAACGTCGTTGCCAAGCGACGATAACCCAACCCCGATGGCAAAA CACCGGGGGGGGCGGCTTGTTTTACAACGTAGTTGCCAAGCGACGAAAAG CCAACCCCGATGCCACCGGGGGGGGGGGGGGCATCCGCAGTTGGTTAAGT TGCCGTAGTACCCAAAGCTTTTGCGATGTGCCTCAGTGGATAACCGGGCA CTGCTGTTTCTCCCGGCGACAAACGCGCATGCTTGTATGTGCATTGTTGT GAACTAATTTTATTCTTTTGTGGGGGCGGCCGGTGCGGGAAAGGGGGGGA TCGTGACCGGTTTGTGCTCGGCGGCGTTGCACGAGCGGCGTCACGCCTTC CGTCGCTCCCCTGGGGAAAACACGAGATGGAGAGACACACGCGTCAGACT TGTGTCGCAGCCAGGACAGCCGATGCCCTGATGAGCCCAAGACCAAACAC TCGATCACAAATGAGTGACCACCCAACAACAAAGACGGCGATGTGTGTGC TATTTGCGCGACGTTGTCGCTCACCCCGTGCCGGCCTTTTCCTGTCATGT TTTTCCAGGGATGCCGGCCTGTACGTCATTCTCGACCTCCACGGAGCCCC CGGTTCTCAAAACGGCCTGGACAACAGCGGCCTTACCAGCCCCGATCCAA ACGAGATAGTGAGGCCGCGTTTGTTGTTGCTCTGTGTGTGCGCGCGTGTG TTTATTATCGGAATTGGACGAGATGAACCACCCCACAAGCTTTTTCGGTG GTCGCCATGGGTAGCCTGTGTTGCGTGCCTGTTGTCATCTATGTATTCGT GTATCTCGAAGTGGATGTGTTTGATGCCAAAGCAGGTTGTTTTATCATGA CTAACTGCCCACACGCAGGAACAGCAGCAGCAGCTGCATGATTTATTGCG TTGGCTATCGTATCCTAGGCCTGGCATCACGATCAACTCCTTCACTTCAC AAGATACGCACATGTACCGCTTTTTCGAGGTGGTGCATATGGTACAACGC ATAGCTCCAATCGACGCACCACATTTACCGAGGTAGCTCAACCGCCCTGC GATGATGCCAAGCTTCGTGAATAAAACATCCGCCCGCACGCCCGCAGGTA TGGGGGGAGACGTGGATGTATTCTCCCGAGAACAACGGCAACACCGTCCG CATCCTCGCGGCGATGGCGGAGTACATCAACCACATCGAAGACTCCTTCG GCCTCGACAACATCATGGCGCTCGAGCTCCTGAACGAGCCTTGGGCACAC CTGGTGAGATGGATGGCGGCGGATGGGGCTTTCCCTGCAGTCGTAACGCG CTGTTTGGGTAAAACGGTATTCGAAGGTTGGCGGATGGGGCTGAAGCTTG TTGCCTGCTGTCGAGAGGGAAAATGAGGGAGGGTTGGTACCGTTGTGAAT GTACCGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGCGCGAAGGATGGGTCTGG TAGGTCGAAACAAGGGATGGATGGATGGATGGATGTTTTTCTCCCTCCGT TCAGAGCTTCAAACATGAAAATTCGGCGATGAACACGGCAAGGACTCAAC AACAACAACAGCAACAACAACAACAACAACAACAACAACACTAGTAACAG TAACAATATCGACGACGGCGATAACAACGCAGGACCTCGGCCGCGTGCGC GACTTCTACGTGACGAGCATCACGGCGGTGCGGCTGGTGCGGCCCCTGAT GCCGATCATCATCCACGACTCCTTCAGGGGACCCATGTGGGCCACCCTCA TGAAGAACTTCCCGTACAAAGACATCGTCATGGTGAGGAGATGGTTTGAT ACGCGATCGGTAATCACGCACCCCTTTTCGTTTTTTTGAGAGTTTTCCTG GAAGAGTGTGCAGCAGAGAAACAGGTCGGTGAAAGGAGCGCATGTAACCA TGGAGAAAAAATTGTTTTCTTTTATCGGGAAGAGAGAGAGAGGAGGGCGG CGTTTCATAAGGCGCCGTCGGGATGATGGTCTACAGGACTTCCATCATCA AAATGGGGAGGCCCGCGCAATCCACGACGTCGCCTCACGGTTGTAACAGG AGGCACGCGATTGTTCTGCTGTGTGTGATGATGGATGGTGAACGCGTGCG TGCGATGTTTTGCTCGCTGTCCTGTTCGTCGTGTTTTGCACCCGTCCCCC TTTTTCCCGAATTCTTCTCCTGACCTCATCGGCTTTGCTTCCTCGAACTG CTTCTTCGTCCGTGCCGGATTTTTGTTGCTGTTCTGATGTTCGTGATCGG TATCATCGTTACGACGACCCCAACGCGGTTATGCCGATGACGATGACGAT GATTTTCCGCGGCACAGGACACTCACATCTACCACGGGTTCAACCCGGTG AGGCAGCGCTTGATCTTGTTGCTGCTGTTGTTGTTGCTGTTGGGTTGTTG TTGGGTTGTTGTCGTTGTCGTTGCTGTTGTTGTCATGGTTTCTTTGTTGT GATTGTTGTTTTGCGTTGGTGGTGGTTGTCGACAGTTGGCCGCACCGCGC GCCTGCATGATTGATCACGCGCGCAGCGTGTGCCTCGCGTTAAGTTTTGG ACACGTGCATGTTTTGCGAGGCAAACACATTCCACCCTCTCCTTTTACTT CCGTGAACTCGTCCTCATGTCCCCCCCGACTGTGTCTTCGTTTTCGCTGT GAGTACTGCTGTCACGTTCTTCTGTACCGTTCTGACCTCTCCGTGTTGCG CCTCCTCTTTCCCCGTTCAACTCGACCTTCATTCACACACGCCTCGTTCT GTTTCGCTTTATCTCACCTATTGATTACCGTCGTTGCCGTGGTGGTCGTC GTCGTCGTGTGGTTTTGTTCATGTTCGTGTTGCGCCTCCTCTTTCCCCGT TCAACTCGACCTTCATTCACACACGCCTCGTTCTGTTTCGCTTTATCTCA CCTATTGATTACCGTCGTTGCCGTGGTGGTCGTCGTCGTCGTGTGGTTTT GTTCATGTTCGTATTTTGGTCTCAGGCCGATCTCTCTTCGGACACAGCAG TAGGAGACAGGTACGGCGAGACCTTGGATTTGGGACGGAACGGAATGAGA CGGAAAACATGGTACCATGGTATATGGTATTGTCATTCAAGCGAAAATGC ATTTCCTCACCCTCGTGTTTCGGAAGTATGCATACAAAGCGCCATGGAAA ATGGTCAAGAGTTAGGGATTGTGCCCGTCGCTGTAAGCATTTCGGGCCAT ATTTGTAGCACAGCGGACTGGTTGTTGTTGTTGCTGTTGCTGTTCACATG CGCGCGGGGTGCCCAAATGCGCGTATGGATTCCTCTCGTCTCTATCTATT TAGTAGATCGCCCGTGGTTGTGAGTAGCAGATCATTTTTTGTCGCGGAAT AACGAAAACAACTATAGCTGGTGCATCATGAACCCCTTGCCCTTACCCTC ACTCACCGCTTCAAGGCTGGTATTGTGTCTCACGGGCTATTTTTTTGTTT TTTTTGCGACAAAAATGGCATGCATGACCGGTCATCGTGCACCCGAATTT GTGGTTGGAATCGCCACATCCAGTCTTCTCTCGGGGGCCTGGACTAAAAT ATTGACGATAAGTCTGGTGACAACACAGCCCCCCCCCACCCATGGCCTCC CGGCAAGATACATGCCGGCGGCACAGCAATTTCGCCCTATCCCCTGGCGC GCGCCCCCTCTCCCTTGCTGCTCATGTGGCTTTCTCGGGCGTGTGCCGTT GCAGGCAGAAGATGTATGTGCATGAGCGTATGGCGTGCTCGTACACGTCC ATGCTCCGGTACCAGACCTGCGCCGTGCTTCCGGTTATGGTCGGGGAGTG GTCGCTCGCCGTGGACAACTGTATGCCCTGGCTAGACTCCAAGTGAGCAT GCTCGCCCGTGTTTGTTGTTGTTGCTGCTGCTGTTGCTGTTGGCGTTGTT GTTCTCTTTGACGCTGTTGTCGTTTTCGTTTTGATTCCACCCAATAAGAG TACAAAGGGGTTGGTTCTTCTGTATGGGAGACCGCTTTACGGATGGGCAG CGATGGTTCACGCCTTGTGCATGGCGTTCATGCGACGACGAGCAACAACA AGAGCCGATGCTTCAGTGTATATGTAGGTTTAGACGGCCTCAAGATAACC CCAGGTCCAGCAGGTTCCTTTCACCACTCGCTGCTGTGAAGACTTTAAAC ACATCCCCTTGGACTATCTCGAACGGGTTGCAGTCTTTCAGTGGTCGTAT ACACGGTCGGGGTCCGTCAAGTTCCCTCAATGGTACGCCCCTGACCGGTA TAATGCCGGTGAAATCGCGTGACAGGAATTGCATGTTCAAGTTGTGTTGT TCTCTGAATTGTGCCGGGTGCCCGGTATAGTGCCTATTAATCTGGCGGGC ACATACCGGCACTAGTGAGGGCCCCCCGCCGTAGCGGATATCGTACTCAA GTAATTTTGTTAACAAGGAACACCGTTTTGTCCTCTGTCCCTTGCCCGGT GCCTACAGGTTCGCCGACTTCGGTCAGTGCGATCACCTCGCGGAGAGGGA AGGGAGCAGCTGGTGGTCCGAACACACGCGGTCCTTCGCCATGAGGCAGA TGGACCGGTACGAGAGGGAGATGGGCTGGGCCTTCTGGACGTGGAAGCTG GAGGACCACCTCGGTGAGTCCCCCCCCCCCCCCCCCCATACATTCCACGG GGCCCCTCTCTGACTTGCTCGGCTCGCGGTAGCGGGTTCGTTGTTGCGGA TAACCCGTTGGTAGTGGACCGGGAAAGGGAGGGGCTGGAGCAGAAGCTGT GGCATTTGCGTACGAGTCTGACATTGCAGGCGCTGATCGAATCAATTGCG TGTGTAGACGTGAACCGCTGCGACGCGAACCGCTGCGAGGCACAGCTTGA GAAAGATTTGAACCACACCGACCACGCCCAAACATCCCTTCATTCCCCCA TTGTGTTGGTGATTCCATGCTGTCTACGTGGGTCATGTGTATGGTAGGTC TTTCCTCCTCCACCGCTCCCTGGCCGCCAGATTCTCGTCGCCTTTTGAAG CAACGCCGACATTATCCACGTACCCTCCCCCCCCGGTCAAACCGCTAAGG CATGCAAAATATGAGTACCCCTACCCCTACCCGTACCCCGACACGACACG ACACGACACGACACGACACGACACGACACAGAGAAAAACGAACCGGCATC CAAGTACTGGTCCTTCAGCATGGCGGTGGAGCACGGCTTCATCGACTTGG ATTTCCCGCACGACGCCTGCGTGCACCCCCCGGCGACCGATTGGGCGGAG CCCCTCGGCACCGACGGCAGCGGCAGTGGAGGGGATGCCAGCCTTGCGGC AGCGCAGGCACCGTCGGGGGTAACGGCCCGTGTGGACGGGAACGCGGCGG CGGCGGTTGGGGTGTCGGTGAGTCTCCTGGGTGGTTGATTTGATCGCGTT TTCGAAGAACGGTAGTGAGTCCACGCATACCATTGGGTAATTAATGTCTA CAGCAGTTGTAGTAAAGTGGCGGTGAGGTATGCGGTGGTGATATTTGTAG TCGGACACTGCGAGTGACGGGTAGAACCGTGCATGACACAAAATAAAGCA CCCACAGAAACACATCACCTACCCCACCAAATCGCAAAACACCGCGGCAA AACATGTTCTTGAGGATCAACATGAGCCCAAAACCTAAACGTACTCTCAG ATGAAGTAGTACGGTAGGGCGGCAGAAGATGCCACACGAACAACGCACCC GGTGATAATTTTTAGTAGCCAAAGTGCTAGATACCACCGGGGGAGGATGT TTTCTTGCGTTATGTTCGGTAGATAGCGATGATTGGTGGAAACATCCACG TAAATCGTGTTCCCCGATCTCGATACATTTCTTGACCCCGGTGTCCATTT GCCGGCGCCCCATGATCCCCTCGGGCCAAATTTTCCTATTCCCCTCACTC GTTGCAGATCGATCACATTGTGGCTCTCTCCAACCAAACCATCCCTCCCC CCCATGCCATCACTTATCCGTCGTCTTTCCACAGAACTCTCCCGAGGAGG CAAAGCACGGGTCTCAGGAGGGGGCATCCTCTCCCGGCGCCATGCTGGGC TTGGTGCTGCTCGGAGCCATGGCGGGAGCGTTGGCCACATTCCTTCTCGT CCGCCATAAGGCTGCCTCCCAGGAGGCGGAGGCGTCGGCAAGCGGTGGCG CGGAGAAGGGCAGCGGCAACAGGGGTGGCGGCTGGATGCCGGCCGTATTC AGGTATGCCTTCACCCCTTTGCTAGTGTTTGGTCGGCGCTTGATGGTAGA CAGCAGCAGCCGGCCCCCGCAAAAAAGGATAATTGATTCGGGGAAGATAC GGAGACACGGTAACCTAAGGGGAAGCAGCGGGTGTGCTGTTGTCTCTGCG TTAGGTAACATCATGCGGTGTAGGGGGGTTTCGTTCCTCGCTCGTGGGGG GGGGGGGGGGGGGGGGGGTTGGTGGGTGTGTGGGGTGTGTTTTTTTGTTG TCCGGGCGTGGGGGGACAAGGGGGGGGGGGGGTTGGTCGTNNNNNNNNNN GGGAGTCGGTGGGGTGTCGGGGGCTGCTGGAGTGTTTGGCGGCGCTGTGT GGGCGGGGGGGGGCGTGGTCGGGTGCGGGGGGGGGGGGGGGGGGGGGGAG CGAGCGACATCGAGAGATAGGGTACGATATATTGATGTCCACGCCTTGCG GCAAAAGCAAAGGGCAGTCTTGAACATGTTCTTAGGCGGAAGCAACGTAC ACGAAGACAGTCACACATGAAATTCAACAGGATCCATTAGACTAAGTTTA GCTGGCTGGCTTCCGTCGCAGAATAAGAGATTGACCCTCGACCCGATGTT GACGTTTTGAAAATTGCGGGATACAACTGCTGTACCCGACGACCCCTTGT AAATCTGGTCCCAAAGTATTTAGGTCGCTGGCGAAACCAAGAGCTCAGTT GTGTTCGTTCCTTACGAAACGCACCCAAACCTCAACACCCTTTCCTGCTT CGCCCGGATGTTTTTTTTTGCGTCTCCGCGCAGCTCGGGCTACGATACCA TCGGCCAGCAATCGTTACCCTGAGCGTGCGAGGGAGCAAAGAATAGCTCG CTAGGAAAAAGCAAGGAATCACATGGATGGAAGAGTCATATATCAAGGTC GGTTTGATCTCCCGGACGTCCAAGGGGTCGATTGATCAGATCCGCCTAGA TTCGTGCATGTTGTCAGTGCCGCGGTCTAATTGCAATAGCGATGGCATGA CTACTGCTGTGTTCATGGTTATAAGGATAGGAGGGCGTTTAGAGATACGG AGAGGGATGCGAATGCAGTCGTGACTCCGACATAAGAGGGTACTTTTTAA GAGGTGGCTCCGATGTAAGAGGGTCGAAATCGGTTGTGACGGACTCGATC CGCGAAGTATAGTTGGGTACCCTCTTTTTCCGGAACAAGAGGGGGCTCCG ATGTTTGAGGTTCGAGGGCGTTTATCACACCACCCTCTTGTTTCGGAGTC ACGGCTGTATACAATATAGGTAACAGAAGGGTCCGCGGTGGTACACCGGG CAGAGTTGTGTGTCGTGAACATGGAGTTCATCAATACGTTGATGAAGCTG GAGGGTAACAACCGCATATGTGTGGAGCGATGAAAAAGAGTCGCGCGTAT CTGGGGCGGGGGATACTGTAATGATGTGTTGGCATCATGTGACGGGCCGA GCTTTTGCTTGTACATCATACGTAGATGGTAGACATGCGGAACGGTGTAG CAGCAAGTACGCGGTGGTTTGTGGTGACGATCGACACTCCGCTCAGTTTT AGAATGGATTTTCACGATGATGATGAGTGATAGTCATGCAGAACGGACAT GGAGTCCGTCCGACGATGTAAGGATGACGACAGCATGTCGTTTCTTTTCA CCAGTCTGTTTGAGGAAGAACCGTTATCCACGACGGCATTATCATCGGCA GAGGAGTTGTGAAAGGCAGCGATTTGTTTCCCCCCGGGTGTGAGGAGATG TCGTGCAAAAAGTGGACTACTTGATACCGCTGTGCAACGGAATAGGCAAG TGCTGTGCGTAGCATTGGTGGTGGTGTGTCGACTCCCTCGCGTCTGCGGA TATTGACTGGACTTGGCAGGGTTCCGTAAGAAGAAAATATGCGGACTTCG CGCTGTTCGGCTCTTGTCTCCCCAACGAATGATGAATGATGGCAATCATG ATCTGCCTGTCGCGAGTTGTCCCTCCGTCTGGGTTTTGTTGCAGGCATTC CATTCGGCCCGCTTCTCCCAATCGCCAGCATTCGTGCATGTTCTATTTCA C
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1365:5547..19997-

>mRNA_E-siliculosus-1a_F_contig1365.2182.1 ID=mRNA_E-siliculosus-1a_F_contig1365.2182.1|Name=mRNA_E-siliculosus-1a_F_contig1365.2182.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4248bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1365:5547..19997- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTCGAGAGGCCCATGAGGATGGTTAACCAGAACAGTATCCTAGCGCT
GCTGCTTGCTGCCGCTAGTACGGTGCCGGCGGAAGCGGGCTTTGTCCTTG
AGATGCTCGAGAGGCCCATGAGGATGGTTAACCAGAACAGTATCCTAGCG
CTGCTGCTTGCTGCCGCTAGTACGGTGCCGGCGGAAGCGGGCTTTGTCCT
TGAGGACCAATCCCCAGGCAACCACGGTAACGCCGGTATGGACCCGGGGA
GCTTCCGTTGCAAGCTCGACCCTAAGCTCACTGAGAAGGACCTGCCCTTC
TTCATCCCGGACATCCAGGGCACCTGGGGTTCGGCCTGCGGACGGAACCG
CGGCGTTTTCGTCGTCGAGCCTCCCGATGGCCACACCTACGGACCAATCC
CCAGGCAACCACGGTAACGCCGGTATGGACCCGGGGAGCTTCCGTTGCAA
GCTCGACCCTAAGCTCACTGAGAAGGACCTGCCCTTCTTCATCCCGGACA
TCCAGGGCACCTGGGGTTCGGCCTGCGGACGGAACCGCGGCGTTTTCGTC
GTCGAGCCTCCCGATGGCCACACCTACGATTGCGGCAACATGCCTGCCGA
TTGGGGGGTGTCTAACGCCGCCGACATCGCTAACCTGACCAAGACCCAGC
CGGCTGTCGCCCTGAAGGCCTACGGTAACTTCGTCGATGCTGTCTACAAC
ACCACCATCGGATTGCGGCAACATGCCTGCCGATTGGGGGGTGTCTAACG
CCGCCGACATCGCTAACCTGACCAAGACCCAGCCGGCTGTCGCCCTGAAG
GCCTACGGTAACTTCGTCGATGCTGTCTACAACACCACCATCGGGAAAAC
CGCGGCGGCCTGCGACTTCGACGGGCTGACGGTCCTAACGTGCGGAAGGG
AAGAGCCCTGGAAAACCGCGGCGGCCTGCGACTTCGACGGGCTGACGGTC
CTAACGTGCGGAAGGGAAGAGCCCTGGAGAACCGCCCCATGGTACGACCA
GCTCAAAGCGCCCATCCGGGCTGTTAACATCGGCGGTCTGTTCGTTCTGG
AGCGTTGGATTGTGCCCACCTTTACCTCTTGGGGGGATGAGAGCGGCATC
CGCGACCAGCACTCTTTCAGCGAGAAGTGTGGAGAGCTCGGAACGTGTGA
ACAGCTAAAGGAGAACCGCCCCATGGTACGACCAGCTCAAAGCGCCCATC
CGGGCTGTTAACATCGGCGGTCTGTTCGTTCTGGAGCGTTGGATTGTGCC
CACCTTTACCTCTTGGGGGGATGAGAGCGGCATCCGCGACCAGCACTCTT
TCAGCGAGAAGTGTGGAGAGCTCGGAACGTGTGAACAGCTAAAGGACCAC
TGGAAGAACTGGTACACCCCTCAGGACTTCAAGGACATGAAGAAGGTTGG
CCTGAACAGCGTCCGCCTTCCGGTAGGGTGGTGGTACTTCGCCGCCAAGA
CGGCCATGTCGGCCGCCCCTTACATCGTGCCCGACGAAGACCTCTACGAC
GCGCACCACCCCATCACCGACGTGGTTCGCTGGGCCAAGACCACTGGAAG
AACTGGTACACCCCTCAGGACTTCAAGGACATGAAGAAGGTTGGCCTGAA
CAGCGTCCGCCTTCCGGTAGGGTGGTGGTACTTCGCCGCCAAGACGGCCA
TGTCGGCCGCCCCTTACATCGTGCCCGACGAAGACCTCTACGACGCGCAC
CACCCCATCACCGACGTGGTTCGCTGGGCCAAGGATGCCGGCCTGTACGT
CATTCTCGACCTCCACGGAGCCCCCGGTTCTCAAAACGGCCTGGACAACA
GCGGCCTTACCAGCCCCGATCCAAACGAGATAGGATGCCGGCCTGTACGT
CATTCTCGACCTCCACGGAGCCCCCGGTTCTCAAAACGGCCTGGACAACA
GCGGCCTTACCAGCCCCGATCCAAACGAGATAGTATGGGGGGAGACGTGG
ATGTATTCTCCCGAGAACAACGGCAACACCGTCCGCATCCTCGCGGCGAT
GGCGGAGTACATCAACCACATCGAAGACTCCTTCGGCCTCGACAACATCA
TGGCGCTCGAGCTCCTGAACGAGCCTTGGGCACACCTGGTATGGGGGGAG
ACGTGGATGTATTCTCCCGAGAACAACGGCAACACCGTCCGCATCCTCGC
GGCGATGGCGGAGTACATCAACCACATCGAAGACTCCTTCGGCCTCGACA
ACATCATGGCGCTCGAGCTCCTGAACGAGCCTTGGGCACACCTGGACCTC
GGCCGCGTGCGCGACTTCTACGTGACGAGCATCACGGCGGTGCGGCTGGT
GCGGCCCCTGATGCCGATCATCATCCACGACTCCTTCAGGGGACCCATGT
GGGCCACCCTCATGAAGAACTTCCCGTACAAAGACATCGTCATGGACCTC
GGCCGCGTGCGCGACTTCTACGTGACGAGCATCACGGCGGTGCGGCTGGT
GCGGCCCCTGATGCCGATCATCATCCACGACTCCTTCAGGGGACCCATGT
GGGCCACCCTCATGAAGAACTTCCCGTACAAAGACATCGTCATGGACACT
CACATCTACCACGGGTTCAACCCGGACACTCACATCTACCACGGGTTCAA
CCCGGCCGATCTCTCTTCGGACACAGCAGTAGGAGACAGGCCGATCTCTC
TTCGGACACAGCAGTAGGAGACAGGCAGAAGATGTATGTGCATGAGCGTA
TGGCGTGCTCGTACACGTCCATGCTCCGGTACCAGACCTGCGCCGTGCTT
CCGGTTATGGTCGGGGAGTGGTCGCTCGCCGTGGACAACTGTATGCCCTG
GCTAGACTCCAAGCAGAAGATGTATGTGCATGAGCGTATGGCGTGCTCGT
ACACGTCCATGCTCCGGTACCAGACCTGCGCCGTGCTTCCGGTTATGGTC
GGGGAGTGGTCGCTCGCCGTGGACAACTGTATGCCCTGGCTAGACTCCAA
GTTCGCCGACTTCGGTCAGTGCGATCACCTCGCGGAGAGGGAAGGGAGCA
GCTGGTGGTCCGAACACACGCGGTCCTTCGCCATGAGGCAGATGGACCGG
TACGAGAGGGAGATGGGCTGGGCCTTCTGGACGTGGAAGCTGGAGGACCA
CCTCGGTTCGCCGACTTCGGTCAGTGCGATCACCTCGCGGAGAGGGAAGG
GAGCAGCTGGTGGTCCGAACACACGCGGTCCTTCGCCATGAGGCAGATGG
ACCGGTACGAGAGGGAGATGGGCTGGGCCTTCTGGACGTGGAAGCTGGAG
GACCACCTCGAGAAAAACGAACCGGCATCCAAGTACTGGTCCTTCAGCAT
GGCGGTGGAGCACGGCTTCATCGACTTGGATTTCCCGCACGACGCCTGCG
TGCACCCCCCGGCGACCGATTGGGCGGAGCCCCTCGGCACCGACGGCAGC
GGCAGTGGAGGGGATGCCAGCCTTGCGGCAGCGCAGGCACCGTCGGGGGT
AACGGCCCGTGTGGACGGGAACGCGGCGGCGGCGGTTGGGGTGTCGAGAA
AAACGAACCGGCATCCAAGTACTGGTCCTTCAGCATGGCGGTGGAGCACG
GCTTCATCGACTTGGATTTCCCGCACGACGCCTGCGTGCACCCCCCGGCG
ACCGATTGGGCGGAGCCCCTCGGCACCGACGGCAGCGGCAGTGGAGGGGA
TGCCAGCCTTGCGGCAGCGCAGGCACCGTCGGGGGTAACGGCCCGTGTGG
ACGGGAACGCGGCGGCGGCGGTTGGGGTGTCGAACTCTCCCGAGGAGGCA
AAGCACGGGTCTCAGGAGGGGGCATCCTCTCCCGGCGCCATGCTGGGCTT
GGTGCTGCTCGGAGCCATGGCGGGAGCGTTGGCCACATTCCTTCTCGTCC
GCCATAAGGCTGCCTCCCAGGAGGCGGAGGCGTCGGCAAGCGGTGGCGCG
GAGAAGGGCAGCGGCAACAGGGGTGGCGGCTGGATGCCGGCCGTATTCAG
AACTCTCCCGAGGAGGCAAAGCACGGGTCTCAGGAGGGGGCATCCTCTCC
CGGCGCCATGCTGGGCTTGGTGCTGCTCGGAGCCATGGCGGGAGCGTTGG
CCACATTCCTTCTCGTCCGCCATAAGGCTGCCTCCCAGGAGGCGGAGGCG
TCGGCAAGCGGTGGCGCGGAGAAGGGCAGCGGCAACAGGGGTGGCGGCTG
GATGCCGGCCGTATTCAGCTCGGGCTACGATACCATCGGCCAGCAATCGT
TACCCTGACTCGGGCTACGATACCATCGGCCAGCAATCGTTACCCTGA
back to top