mRNA_E-siliculosus-1a_F_contig1362.2164.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: D7FPS0_ECTSI (Myosin heavy chain, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS0_ECTSI) HSP 1 Score: 204 bits (520), Expect = 1.310e-66 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1
Query: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEVLGG 324
MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLE+LGG
Sbjct: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILGG 108
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: A0A835Z8J0_9STRA (Putative myosin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J0_9STRA) HSP 1 Score: 155 bits (392), Expect = 8.570e-47 Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = 1
Query: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEVLG 321
M RVREEH+ +Q V+ +LN KIS VL+KQEGDFLAAYRAHMYTVQKELQ+LRQRV++AE LQ+NDKVQ+LED C+WYR+EALRLDSFN+AMKKDLK M K+ VLG
Sbjct: 1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVLG 107
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: A0A7S2XXS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXS8_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.580e-43 Identity = 74/89 (83.15%), Postives = 81/89 (91.01%), Query Frame = 1
Query: 52 LNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEVL 318
LN KIS VL+KQE DFLAAYRAHMY VQKELQ LRQR ++AEN LQKNDK+QKLE+EC+WYRKEALRLDSFNTAMKKDLKYMK KLE+L
Sbjct: 4 LNDKISGVLSKQESDFLAAYRAHMYNVQKELQALRQRAVDAENALQKNDKIQKLEEECEWYRKEALRLDSFNTAMKKDLKYMKEKLEIL 92
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: A0A3F2RK62_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RK62_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.990e-35 Identity = 67/106 (63.21%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEVL 318
M VRE+H++L VV SL++KIS VLA+QE DFLAAYRAHMYTVQKEL +R+++ E V K++K++K+EDE DWYRKEALRLD+F T M KDLKYMK LE +
Sbjct: 1 MAVVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYTVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAI 106
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: A0A6A3F344_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F344_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.030e-32 Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEVL 318
M VRE+H++L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+EDE DWYRKEALRLD+F T M KDLKYMK LE +
Sbjct: 42 MALVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTIMTKDLKYMKENLEAI 147
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: A0A8J5J7K0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J7K0_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.830e-32 Identity = 63/100 (63.00%), Postives = 80/100 (80.00%), Query Frame = 1
Query: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMK 300
M VR++H++L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+EDE DWYRKEALRLD+F T M KDLKYMK
Sbjct: 45 MAIVRQKHAQLHDVVGSLSEKISSVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMK 144
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: A0A662X445_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X445_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.800e-32 Identity = 67/106 (63.21%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEVL 318
M VRE+H++L VV SL++KIS VLA+QE DFLAAYRAHMYTVQKEL +R+++ E V K +K++K+EDE DWYRKEALRLD+F T M KDLKYMK LE +
Sbjct: 45 MALVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYTVQKELHEMREKIHRNETVENKTEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAI 150
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: A0A225W5V9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5V9_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.170e-32 Identity = 67/106 (63.21%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEVL 318
M VRE+H++L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++KLEDE DWYRKEALRLD+F T M KDLKYMK LE +
Sbjct: 42 MAMVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKLEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAI 147
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: A0A329RSS2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RSS2_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.000e-31 Identity = 61/98 (62.24%), Postives = 78/98 (79.59%), Query Frame = 1
Query: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKY 294
M VR++H++L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+EDE DWYRKEALRLD+F T M KDLKY
Sbjct: 1 MAIVRQKHAQLHDVVGSLSEKISSVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTKMTKDLKY 98
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Match: A0A6A3TYV6_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TYV6_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.330e-31 Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEVL 318
M VRE+H++L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+EDE DWYRKEALRLD+F T M KDLKYMK LE +
Sbjct: 42 MALVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTIMTKDLKYMKENLEAI 147 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1362.2164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1362.2164.1 >prot_E-siliculosus-1a_F_contig1362.2164.1 ID=prot_E-siliculosus-1a_F_contig1362.2164.1|Name=mRNA_E-siliculosus-1a_F_contig1362.2164.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=109bp MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTback to top mRNA from alignment at E-siliculosus-1a_F_contig1362:10092..11385+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1362.2164.1 ID=mRNA_E-siliculosus-1a_F_contig1362.2164.1|Name=mRNA_E-siliculosus-1a_F_contig1362.2164.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1294bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1362:10092..11385+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1362:10092..11385+ >mRNA_E-siliculosus-1a_F_contig1362.2164.1 ID=mRNA_E-siliculosus-1a_F_contig1362.2164.1|Name=mRNA_E-siliculosus-1a_F_contig1362.2164.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=654bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1362:10092..11385+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |