mRNA_E-siliculosus-1a_F_contig1361.2158.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: D7G473_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G473_ECTSI) HSP 1 Score: 491 bits (1265), Expect = 1.870e-170 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 2
Query: 287 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 1024
AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD
Sbjct: 5 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 250
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: A0A835Z838_9STRA (Fibrillarin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z838_9STRA) HSP 1 Score: 433 bits (1114), Expect = 1.300e-147 Identity = 212/243 (87.24%), Postives = 229/243 (94.24%), Query Frame = 2
Query: 287 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSK 1015
AKVVVEPHRHEGVFIAR KEDALCTLNS+PGKAVYGEKLISV+ PP+ DG T+KIEYRVWNPFRSK+AAAILGG + I + PG+KVLYLGAAAGT+VSHV+DIVGP+GCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGHCVIS+KASCVDSTA+PEAVFAQEVSKL++E FKP EQ+TLEPYERDHAVV+A YR KKSK
Sbjct: 5 AKVVVEPHRHEGVFIARSKEDALCTLNSTPGKAVYGEKLISVDGPPTADGATTKIEYRVWNPFRSKIAAAILGGTENIWMAPGSKVLYLGAAAGTSVSHVSDIVGPAGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQARIVALNSHYFLKNGGHCVISVKASCVDSTAAPEAVFAQEVSKLRSEGFKPLEQLTLEPYERDHAVVVAEYRAAKKSK 247
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: A0A7S2UWV2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV2_9STRA) HSP 1 Score: 418 bits (1075), Expect = 2.640e-141 Identity = 204/245 (83.27%), Postives = 221/245 (90.20%), Query Frame = 2
Query: 290 KVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 1024
KVV+EPHRHEGVFIAR KEDAL TLNS+PGK VYGEK I V+ PP DG T+KIEYRVWNPFRSKLAAA+LGGVD I + PGAKVLYLGAAAGTTVSHV+DIVGP G VYAVEFAHRPGRDLINMAK+RTNVIPIIEDARHPLKYRMLV MVDT+FADVAQPDQARIVALN+HYFLKNGGH VISIKASC+DSTA PEAVFA+EV KL+TE FKP EQ+TLEPYERDHAVV+ YRPPKK+K +
Sbjct: 28 KVVIEPHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVDGPPGPDGNTTKIEYRVWNPFRSKLAAAVLGGVDNIWMAPGAKVLYLGAAAGTTVSHVSDIVGPQGAVYAVEFAHRPGRDLINMAKARTNVIPIIEDARHPLKYRMLVPMVDTIFADVAQPDQARIVALNAHYFLKNGGHFVISIKASCIDSTAPPEAVFAREVKKLQTEQFKPAEQLTLEPYERDHAVVVGAYRPPKKAKKSE 272
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: A0A6S9GIT5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GIT5_HETAK) HSP 1 Score: 416 bits (1070), Expect = 6.380e-141 Identity = 202/244 (82.79%), Postives = 223/244 (91.39%), Query Frame = 2
Query: 287 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKS 1018
AKV++EPHRHEGVFIARGKEDAL TLNS+PGK VYGEK + V+ PP DG T+K+EYRVWNPFRSKLAAAILGGVD I + PG+KV+YLGAAAGTTVSHV+DIVGP+G VYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGH V+SIKASC+DSTAS EAVFA+EV KL+ E F+P+EQ+TLEPYERDHAVV+A YR PKK K+
Sbjct: 5 AKVIIEPHRHEGVFIARGKEDALVTLNSTPGKDVYGEKRVQVDGPPGPDGNTTKLEYRVWNPFRSKLAAAILGGVDNIWMKPGSKVMYLGAAAGTTVSHVSDIVGPTGAVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQARIVALNSHYFLKNGGHAVVSIKASCIDSTASAEAVFAREVKKLQDEQFRPQEQLTLEPYERDHAVVVATYRQPKKKKA 248
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: B8CBC2_THAPS (Uncharacterized protein n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8CBC2_THAPS) HSP 1 Score: 415 bits (1066), Expect = 1.820e-139 Identity = 202/244 (82.79%), Postives = 224/244 (91.80%), Query Frame = 2
Query: 287 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKS 1018
+KVV+EPHRHEGVFIARGKEDAL TLNS+PG AVYGEK ISVE PP DG T+K+EYRVWNPFRSK+AAAILGGVD I I PG+KVLYLGAAAGT+VSHV+DIVGP G VYAVEF+HRPGRDL+N+AK+RTNVIPIIEDARHPLKYRMLVGMVD VFAD+AQPDQARIVALNSHYFLKNGGH VI+IKASC+DSTA+PEAVF +EVSKL++ENFKP EQ+TLEPYERDH V+IA YRP KK KS
Sbjct: 59 SKVVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVETPPGPDGNTTKVEYRVWNPFRSKIAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGAVYAVEFSHRPGRDLLNVAKARTNVIPIIEDARHPLKYRMLVGMVDCVFADIAQPDQARIVALNSHYFLKNGGHSVIAIKASCIDSTAAPEAVFRREVSKLQSENFKPLEQLTLEPYERDHCVLIAQYRPSKKKKS 302
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: A0A8J2T0A1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0A1_9STRA) HSP 1 Score: 412 bits (1060), Expect = 1.070e-138 Identity = 202/241 (83.82%), Postives = 220/241 (91.29%), Query Frame = 2
Query: 287 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKK 1009
AKVVVEPHRHEGVFIARGKED + TLNS+PGK VYGEK ISV+ P +EDGTT+KIEYRVWNPFRSKL AAILGGVD IH+ PG+KVLYLG AAGTTVSHV+D+VGP GCVYAVEF+HRPGRDLINMAK RTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNS YFLK GG V+SIKASC+DSTA+PEAVFA EV+KL+ + FKPKEQ+TLEPYERDHAVV+ LYRPPKK
Sbjct: 55 AKVVVEPHRHEGVFIARGKEDVIVTLNSTPGKDVYGEKRISVDGPANEDGTTTKIEYRVWNPFRSKLCAAILGGVDTIHMKPGSKVLYLGGAAGTTVSHVSDLVGPQGCVYAVEFSHRPGRDLINMAKHRTNVIPIIEDARHPLKYRMLVGMVDCVFADVAQPDQARIVALNSQYFLKAGGGFVVSIKASCIDSTATPEAVFAAEVAKLQKDQFKPKEQLTLEPYERDHAVVVGLYRPPKK 295
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: A0A7S0CDH6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDH6_9STRA) HSP 1 Score: 414 bits (1063), Expect = 1.250e-138 Identity = 201/243 (82.72%), Postives = 222/243 (91.36%), Query Frame = 2
Query: 287 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSK 1015
AKV+VEPHRHEG+F+ARGKEDAL TLNS+PG AVYGEK ISV+ PP DG +K+EYRVWNPFRSKLAAA+LGGVD I I PG KVLYLGAAAGT+VSHV+DIVGP+G VYAVEF+HRPGRDLINMAKSRTNVIPIIEDARHPLKYRML+GMVDTVFADVAQPDQARIVALNS YFLKN GHCVIS+KASC+DSTA+PEAVF +EVSKL+ ENF+P EQ+TLEPYERDHAVVIA +RP KK K
Sbjct: 82 AKVIVEPHRHEGIFVARGKEDALVTLNSTPGAAVYGEKRISVDGPPGADGNATKVEYRVWNPFRSKLAAAVLGGVDNIWIKPGYKVLYLGAAAGTSVSHVSDIVGPTGSVYAVEFSHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLIGMVDTVFADVAQPDQARIVALNSSYFLKNKGHCVISVKASCIDSTAAPEAVFRREVSKLQAENFRPLEQLTLEPYERDHAVVIAQFRPDKKKK 324
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: A0A7S2KUE1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KUE1_9STRA) HSP 1 Score: 413 bits (1061), Expect = 2.340e-138 Identity = 203/246 (82.52%), Postives = 223/246 (90.65%), Query Frame = 2
Query: 287 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKSKD 1024
AKVV+EPHRHEGVFIARGKEDAL TLNS+PG AVYGEK ISVE+PP DG + K+EYRVWNPFRSK+AAAILGGVD I I PG+KVLYLGAAAGT+VSHV+DIVGP G VYAVEF+HRPGRDL+N+AK RTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGH VISIKASC+DSTA+PEAVF +EVSKL +ENFKP EQ+TLEPYERDH V+I+ YRP KK KS +
Sbjct: 82 AKVVIEPHRHEGVFIARGKEDALVTLNSTPGVAVYGEKRISVESPPGPDGNSVKVEYRVWNPFRSKIAAAILGGVDNIWIKPGSKVLYLGAAAGTSVSHVSDIVGPKGNVYAVEFSHRPGRDLLNVAKGRTNVIPIIEDARHPLKYRMLVGMVDVVFADVAQPDQARIVALNSHYFLKNGGHSVISIKASCIDSTAAPEAVFRREVSKLTSENFKPLEQLTLEPYERDHCVLISQYRPTKKKKSSE 327
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: A0A7S4R4V9_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4V9_9STRA) HSP 1 Score: 409 bits (1051), Expect = 6.820e-137 Identity = 199/244 (81.56%), Postives = 223/244 (91.39%), Query Frame = 2
Query: 287 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSKS 1018
AKV+VEPHRH+G+F+ARGKEDAL TLNS+PG AVYGEK ISV+ P DG +K+EYRVWNPFRSK+AAA+LGGVD I I PG+KVLY+GAAAGT+VSHV+DIVGP+G VYAVEF+HRPGRDLIN+AKSRTNVIPIIEDARHPLKYRMLVGMVD VFADVAQPDQARIVALNSHYFLKNGGH VI+IKASC+DSTA+PEAVF +EVSKL +ENFKP EQ+TLEPYERDHAVVIA YRP KK K+
Sbjct: 79 AKVIVEPHRHKGIFVARGKEDALVTLNSTPGVAVYGEKRISVDGPVGSDGNVTKVEYRVWNPFRSKIAAAVLGGVDNIWIEPGSKVLYIGAAAGTSVSHVSDIVGPTGSVYAVEFSHRPGRDLINVAKSRTNVIPIIEDARHPLKYRMLVGMVDVVFADVAQPDQARIVALNSHYFLKNGGHSVIAIKASCIDSTAAPEAVFRREVSKLTSENFKPLEQLTLEPYERDHAVVIAEYRPNKKKKA 322
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Match: I2CQX8_NANGC (rRNA 2'-O-methyltransferase fibrillarin (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CQX8_NANGC) HSP 1 Score: 406 bits (1043), Expect = 8.620e-137 Identity = 197/243 (81.07%), Postives = 219/243 (90.12%), Query Frame = 2
Query: 287 AKVVVEPHRHEGVFIARGKEDALCTLNSSPGKAVYGEKLISVEAPPSEDGTTSKIEYRVWNPFRSKLAAAILGGVDGIHIVPGAKVLYLGAAAGTTVSHVADIVGPSGCVYAVEFAHRPGRDLINMAKSRTNVIPIIEDARHPLKYRMLVGMVDTVFADVAQPDQARIVALNSHYFLKNGGHCVISIKASCVDSTASPEAVFAQEVSKLKTENFKPKEQVTLEPYERDHAVVIALYRPPKKSK 1015
AKV++E HRHEGVFIAR KEDAL TLNS+PGK VYGEK I VE PP +G +K+EYRVWNPFRSKLAAAILGGVD I + PG+KVLYLGAA+GTTVSHV+DIVGP+GCVYAVEF+HRPGRDLINMAK RTNVIPI+EDARHPLKYRMLVGMVDT+FADVAQPDQARIV+LNSHYFLKNGGH VISIKASC+DSTA+PEAVF +EV KL+ E FKP EQ+TLEPYERDHAVV+A YRP K+K
Sbjct: 9 AKVIIEAHRHEGVFIARSKEDALVTLNSTPGKDVYGEKRIQVEGPPGPEGVATKLEYRVWNPFRSKLAAAILGGVDHIWMKPGSKVLYLGAASGTTVSHVSDIVGPTGCVYAVEFSHRPGRDLINMAKLRTNVIPIVEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSLNSHYFLKNGGHVVISIKASCIDSTAAPEAVFQKEVKKLQEEKFKPLEQLTLEPYERDHAVVVATYRPAPKTK 251 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1361.2158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1361.2158.1 >prot_E-siliculosus-1a_F_contig1361.2158.1 ID=prot_E-siliculosus-1a_F_contig1361.2158.1|Name=mRNA_E-siliculosus-1a_F_contig1361.2158.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=320bp MSGFRGGGRGGGRGTPRGGGRGGRGGFGGRDGGRGGRGGGRGGGRGGGRGback to top mRNA from alignment at E-siliculosus-1a_F_contig1361:945..6052- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1361.2158.1 ID=mRNA_E-siliculosus-1a_F_contig1361.2158.1|Name=mRNA_E-siliculosus-1a_F_contig1361.2158.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5108bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1361:945..6052- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1361:945..6052- >mRNA_E-siliculosus-1a_F_contig1361.2158.1 ID=mRNA_E-siliculosus-1a_F_contig1361.2158.1|Name=mRNA_E-siliculosus-1a_F_contig1361.2158.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1920bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1361:945..6052- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |