mRNA_E-siliculosus-1a_F_contig1360.2155.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A6H5J5Q6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J5Q6_9PHAE) HSP 1 Score: 1080 bits (2794), Expect = 0.000e+0 Identity = 617/679 (90.87%), Postives = 622/679 (91.61%), Query Frame = 3
Query: 72 MWLASPFSYLCSAAATTLSTAFAVPSSYSSLSLANVRHLTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SSRTFTLRASSTVGPSSATAAVGRRPFVSSAASYASGDSITSGMVPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARNAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGRGGGGDLPSVQEEEG-EAWRGAAXXXXXXXXXXGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATNAAGEAGEPGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFLTLDGVMAESGLPESLRSMFLGLDESSFREDLSSSSIRAGVASPGL 2102
MWLASPFSYLCSAAATTLSTAFAVPSSYSSLSLANVRHL+T+ XXXXXXXXXXXXX XXXX SSRTFTLRASSTVGP SA AA+GRRPFVSS ASYASGDSITSGMVPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLAR AYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDG GGGGDLPSV EEEG EA RG A GEAE VVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATN EAGE GAPVVVLREGAMVRAAL RGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGE PQKP ADKAAAGWGREGEQ VQTDEGMGAG XXXXXX DVDAGGGDVG EERE+KRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGRED GGRFLTLD V+AESGLPESLRSMFLGLDESSFREDLSSSSIRAGVASPGL
Sbjct: 1 MWLASPFSYLCSAAATTLSTAFAVPSSYSSLSLANVRHLSTATTTPITSSLPRALAATGXXXXXXXXXXXXXSRXXXXXSSRTFTLRASSTVGPPSAAAALGRRPFVSSTASYASGDSITSGMVPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDG-GGGGDLPSVHEEEGVEAGRGEATAAA------GEAEAVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATN---EAGEAGAPVVVLREGAMVRAALLRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAASAXXXXXXLDVDAGGGDVGDEEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDVGGRFLTLDEVIAESGLPESLRSMFLGLDESSFREDLSSSSIRAGVASPGL 669
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A836CF87_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF87_9STRA) HSP 1 Score: 250 bits (638), Expect = 3.580e-68 Identity = 227/689 (32.95%), Postives = 291/689 (42.24%), Query Frame = 3
Query: 492 PQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAP-GYCSREAAEGLARNAYARAVSLCVAES-----------------------PDRGPH--------------------------VLPDRRVIA------VGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGRGGGGDLPSVQEEEGEAWRGAAXXXXXXXXXXGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATNAAGEAGEPGAPVVVLREGA---------------------------------------------------MVRAALPRGA-TVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGG--VGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQV-EMVSALSEIRHLGCSFIVGGREDAGG--------------------------------------------RFLTLDGVMAESGLPESLRSMFLGLDESSFREDLSSSSIRAGVAS 2093
PQ+C+ST GAGGQA++WLLGVPGASA LLEATVPY + M + AP CS EAA +AR AY RA+ L VAE P RG H V+ D+ + VG TAA+ S++P+RG H+C+V A A G Y LTL+KGRRDR+GEDA VSRL+L+A+ + P F LLLD + Q E VP A PDA++ L+AG G LV+P G +AA M+ LP A ++ PGS+NPLH GHV L++AA++ R Q D G+ XXXXXXXX G + + +FE+SV+N DKG L E+ RRV QF+ GG +G Y VA+T APLF +KARLFPGC FVVG DT +RI+DP+YY + EM +AL+EI++LGC IVGGR RF TL V+ +S LP+SLR MF+GL+E FR DLSS+ +RA A+
Sbjct: 5 PQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEP-----PEAFLRAALLLDXXXXXXXXSAPQPPE----------------------------AVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACY--------------------------------ARTQADSSAGSXXXXXXXXX------------GSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAAA 616
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A7S2DDP4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDP4_9STRA) HSP 1 Score: 228 bits (582), Expect = 5.370e-62 Identity = 178/551 (32.30%), Postives = 256/551 (46.46%), Query Frame = 3
Query: 435 MVPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARNAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGRGGGGDLPSVQEEEGEAWRGAAXXXXXXXXXXGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATNAAGEAGEPGAPVVVLREGAM-VRAALPRGATVILPGSYNPLHRGHVGLLEAARS--LLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFLTLDGVMAESGLPESLRSMFLGLDESSFREDLSSSSIR 2078
+VP D + IR +Y ++ + GAG A SWLLGVPGASA +LE VPY + + G +C E A +A AY RA+ L + ++ D PH + + V T A++SS P+RG H+ +V A+TA G Y L L+KG RDR GE+ SRL+++AIA+A PV F A LL E E V PT+ A+++L++ + LV+P + +T P P A+ + +P ++++PGS+NP+H+GHV + + A+ +L A GE+ G+ AG I EIS N DK +G + + RV + G VAVT APLFS+KA++FP FVVGADTA+RIID +YYG ++ +V AL IRH GC FIV GR++ FLTL ++ S LP +L+S+F L++ FR D+SS+ IR
Sbjct: 44 VVPADVTQTIRNLYAMPKPARIYIVATGAGSTAGSWLLGVPGASASVLEMCVPYAKASLAKFL--GGEPKHFCCEETAVAMAEKAYERALHLWMMDN-DGNPHCVGGENFMGVSITGAIVSSTPKRGEHRVHVAAKTALGTTTYTLCLAKGERDRVGEEHVASRLVIRAIAEAAQTPVSDEFSACSLL------------------------------------EGEVVQGPIFTPTSS------ALQKLLSSKLSNVLVLPLGSMPST--------PQGPGAATTATALEIADFIPARKSILVPGSFNPIHQGHVEMAKKAQQQVILTAAAAGEAEDGD------------------------------AGITPPI-----------------------------ILEISAFNADKPTIGYDAVADRVRLIQKAG-----LAVAVTNAPLFSDKAKMFPNSLFVVGADTARRIIDKKYYGGTEAGVVLALGYIRHQGCGFIVAGRKETDDEFLTLPMILQGSTLPPALQSLFTELED--FRLDISSTDIR 475
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A7S2RU63_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RU63_9STRA) HSP 1 Score: 204 bits (519), Expect = 9.420e-54 Identity = 175/548 (31.93%), Postives = 246/548 (44.89%), Query Frame = 3
Query: 447 DASALIRAVYDSKPT-PQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARNAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKG-RRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGRGGGGDLPSVQEEEGEAWRGAAXXXXXXXXXXGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATNAAGEAGEPGAPVVVLR-EGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFLTLDGVMAESGLPESLRSMFLGLDESSFREDLSSSSIRA 2081
D A++ +Y + P V V TAG G A WL VPGAS C+LE +VPY A + M G +C A + + A RA L +AE D P L D+ + + TA++ +++ +RG H +V T G Y+L L K +R R ED VSRL+L+A+A+A G+ V F A L + LP ++G+ DL H E+ C LVV A+G P A V + A + P T+I PGS+NPLH GH+ L++ A Q Q +G+ R R +FE+SV+N DK L ++ + R+ QF + V VT+APLF EKAR+FP FV+GADTA+RI+D +YYG++ +EM +AL IR GCSF VGGR+D G FLT+D ++ + LPESL ++F G FR D+SS+ +RA
Sbjct: 17 DVDAMLARLYAQETNAPLVAVVTAGGGSAAGGWLTSVPGASRCVLEVSVPYLKAALTEYM--GYEPAKFCDAGTALDMGKMALRRAKCLWLAEH-DGDPASLADQTFMGLSATASLATTRQKRGAHTAWVAVCTDHGHTLYQLELDKSAQRPRQVEDVLVSRLVLRALAEAAGLEVDHAF-ASKGLAEAEA----LPQGHHQQGQT---------------------------DLQDLLHSEP---EVKLPSCENVLVVA--------ASGSTENPAAATSVDKITFATMPNYRPSPRTIIYPGSFNPLHHGHLNLVKFA------------------------------------QDHQVSKGL----------------------------PRPRV----VFELSVANADKAPLSLQTVTERLDQFGRHNEQDY-RAVVVTRAPLFVEKARMFPNSVFVIGADTARRIVDKKYYGHNDMEMAAALGAIRDQGCSFFVGGRQD-GDEFLTIDKILQQIDLPESLSAIFDGPRSEEFRVDVSSTELRA 448
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A7S3XRD4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRD4_HETAK) HSP 1 Score: 199 bits (507), Expect = 9.750e-53 Identity = 158/447 (35.35%), Postives = 206/447 (46.09%), Query Frame = 3
Query: 759 RVIAVGCTAAVLSSKPRRGPHQCYVCAQTAD-GLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGRGGGGDLPSVQEEEGEAWRGAAXXXXXXXXXXGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTAL-VVPRDTRGATNAAGEAGEPGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGG-VGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFLTLDGVMAESGLPESLRSMFLGLDESSFREDLSSSSIRAGVA 2090
R++ +G T A+ S+ P+RG H+ +V T D GL Y L L+KG R RSGED VSRLL++A+ADA V VP F A L+ GG +P EG RGA A+ L +GRC T + V RG T P+ ++ P G T++ PGSYNPLH GH+ L+ AR+L AAAG EG R +FEI+ N DK L ++ R+ QF+ W V VTK PLF EKARLFP C FVVGADTA R+IDP+YY +EM++ALSEI LGC F+VGGR G FLT+D V+ E LP+ +++MF G+ E +FR D+SS+ +R A
Sbjct: 25 RLVGLGWTCALASAAPKRGQHRAHVATYTTDHGLVGYSLELAKGARTRSGEDRQVSRLLVRALADAAQVQVPLAFPAAGLV-----GGERVP-----EGRP-RGARRG------------------------------ALAALYSGRCSTVVQVASLGPRGETR----------PMRIVDV-----TPFPPG-TIVYPGSYNPLHEGHLSLMRTARAL-----------------------AAAGARAEG-----------------------------------------RPPPAAVFEIAAFNADKPPLARPALEARLQQFTNSTPETSWA--VVVTKVPLFIEKARLFPNCTFVVGADTATRLIDPKYYNGDPLEMINALSEIAVLGCRFVVGGRRVEGRGFLTVDHVLREQRLPQKIKNMFYGIVEEAFRMDISSTELRQKAA 348
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A2K3DNV8_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DNV8_CHLRE) HSP 1 Score: 193 bits (491), Expect = 1.150e-49 Identity = 193/561 (34.40%), Postives = 258/561 (45.99%), Query Frame = 3
Query: 438 VPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPG-YCSREAAEGLARNAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGRGGGGDLPSVQEEEGEAWRGAAXXXXXXXXXXGEAETVVSAEVVPTA-DLAHDP-----DAIEELVAGRCGTALVVPRDTRGATNAAGEAGEPGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGRED-AGGRFLTLDGVMAESGLPESLRSMF-LGLDESSFREDLSSSSIRAGVAS 2093
+P D +LI+ ++ S+ + V T G Q+ISWLL VPGASA +LEA VPY + + + G + P +CS A +A AY RA +L ++ VG T A+ + +RG H+ YV G LTLSKG R R GED VSRLL++ +A+A GV D LP + + GE AAXXXXXXX XX P A D+ HD D ++ L+AG + R + G G GAP V + PR V LPGS+NPLH GH LL A + A KAA GR+ + G FE++V N DKG LG++EI+ RV QF G PV VT+AP F++KA L FVVG DTA R++ P+Y+G+S ++M+ S RH GCSF+V GR D A GRFLTL A+ +P + +F LGL E+ FR D+SS+ +R A+
Sbjct: 44 LPPDVESLIKRIHASRT--KAVVYTTGGAVQSISWLLSVPGASATVLEAAVPYARDSLVEVL--GGKEPAQFCSAGTAAAMAEAAYRRAAALSGFGDG-----------IVGVGATCALATFPLKRGEHRAYVAVHGGGGRRCVSLTLSKGARSRVGEDDLVSRLLVKILAEASGV--------DAANFP-------LPLIGPQ-GEGAAAAAXXXXXXXAXXXXXXXXXXXXXSPQAPDVLHDDCAAAGDPLQRLLAG----------EVRCVEYSGG--GPSGAPAEVCVDA-------PRPGRVYLPGSFNPLHDGHKQLLATAVAA--------------------ASKAA---GRQ---------------------------------------------LEGAFELTVENADKGLLGLDEIRARVAQFVAAG-----LPVVVTRAPRFNDKAGLLHAARFVVGYDTAVRLVMPKYHGDSLMQMLLDYSGFRHSGCSFVVAGRRDGASGRFLTL----ADVSVPTQMADLFPLGLTEADFRMDISSTELRQRAAA 477
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A835T646_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T646_CHLIN) HSP 1 Score: 187 bits (475), Expect = 1.500e-47 Identity = 190/558 (34.05%), Postives = 256/558 (45.88%), Query Frame = 3
Query: 438 VPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPG-YCSREAAEGLARNAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGRGGGGDLPSVQEEEGEAWRGAAXXXXXXXXXXGEAETVVSAEVVPTA---DLAHDPDAIEELVAGRCGTALVVPRDTRGATNAAGEAGEPGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGRED-AGGRFLTLDGVMAESGLPESLRSMF-LGLDESSFREDLSSSSIRAGVAS 2093
+P D ++I+ ++ S+ T V +T GA Q+ISWLL VPGASA +LEA VPY + + + G + P +CS A +A +AY RA +L ++ VG T A+ + +RG H+ YV G LTLSKG R R GED SRLL++ +A+A GV AD LP + G XXXXXXXXXX S+ V P D A D ++ L+AG + R + G G GAP V + PR V LPGS+NPLH GH LL A + A+A GR+ + G FE++V N DKG L + EI+RRV QF G P+ VT+AP F++KA L FVVG DTA R++ P+Y+G+S ++M+ S RH GCSF+V GR D A GRFLTL V +P + +F LGL E++FR DLSS+ +R A+
Sbjct: 44 LPPDVESVIKRIHASR-TKAVVYATGGAV-QSISWLLSVPGASATVLEAAVPYARDSLVEVL--GGKEPAQFCSAGTAAAMAESAYRRAAALGGFGDS-----------LVGVGATCALATFPLKRGEHRAYVAVHGGGGRRCVALTLSKGSRSRVGEDDLASRLLVKVLAEASGVDT-----ADF----------QLPLIT--------GXXXXXXXXXXXXXXXXXSPSSPVPPDVLQDDCAAAGDPLQRLLAG----------EVRCVEYSGG--GPSGAPAEVCVDA-------PRPGRVYLPGSFNPLHEGHKQLLATAVAA-----------------------ASAAAGRQ---------------------------------------------LEGAFELTVENADKGLLDLAEIRRRVAQFVAAG-----LPLVVTRAPRFNDKAGLLHAARFVVGYDTAVRLVMPKYHGDSLMQMLLDYSSFRHSGCSFVVAGRRDGASGRFLTLSDVA----VPAQMADLFPLGLSEAAFRVDLSSTELRQRAAA 467
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A2V0P997_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P997_9CHLO) HSP 1 Score: 186 bits (471), Expect = 8.180e-47 Identity = 188/572 (32.87%), Postives = 235/572 (41.08%), Query Frame = 3
Query: 429 SGMVPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARNAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHL-LLDGRGGGGDLPSVQEEEGEAWRGAAXXXXXXXXXXGEAETVVSAEVVPTADLAHD-PDAIEELVAG--RCGTALVVPRDTRGATNAAGEAGEPGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGN-SQVEMVSALSEIRHLGCSFIVGGREDA-GGRFLTLDGVMAESGLPESLRSMFLGLDESSFREDLSSSSIRAGVASPGL*NNPGRPC 2126
SG + + AL+R ++ + V V+ G QA+ WLLGVPGAS +LE + PYC + + G YCS A LAR AY RA L +P V+ V T A+ S P+RG H+ +V A G A + L KG R R GED SRLLLQ A A G A HL L G G +E E G A XXXX + D + L+AG RC V G V PR V LPGS+NPLHRGH LL AA AAAG GRE G FE+SV N DKG L +EE + RV QF G PV +T+APL+ +KA LFP AF VG DTA R++ RYYG+ S + +A + R GCS +V GR +A GRFL L + +P L + + E+ FR DLSS+++RA A GL PG P
Sbjct: 42 SGDLDPEIEALVRGLHANDVKAVVYVT--GGASQAVPWLLGVPGASNTVLEISAPYCRDSLVSIL--GKEPEQYCSESTALDLARAAYRRAAELTPFGAP-----------VLGVAATCALASEPPKRGEHRAHVAAWAGGGGAAAGVRLEKGARARWGEDGVASRLLLQVFARAAGSRPD----ALHLGLRTASGSGXXXXXXXDELIERAVGLADLVGGGXXXXXXXXXXXXXXXXXXXXXXXEGDDPLALLLAGKVRC----------------------------VEFSGGRVYVDAPRPGRVYLPGSFNPLHRGHESLLAAAC-------------------------AAAGRGRE----------------------------------------------EGAFELSVGNADKGVLPLEEARLRVAQFVALGA-----PVVLTRAPLYVDKAALFPRSAFAVGIDTAARLVQARYYGDGSPAALAAAFAPFRAAGCSLLVAGRAEAPSGRFLELGDIQ----IPPELSGLLAPIPEADFRSDLSSTALRA--AGLGLAKGPGGPA 484
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A3D0UM25_9CHLR (CTP_transf_like domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0UM25_9CHLR) HSP 1 Score: 182 bits (463), Expect = 8.390e-47 Identity = 160/540 (29.63%), Postives = 226/540 (41.85%), Query Frame = 3
Query: 459 LIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARNAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGRGGGGDLPSVQEEEGEAWRGAAXXXXXXXXXXGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATNAAGEAGEPGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFLTLDGVMAESGLPESLRSMFLGLDESSFREDLSSSSIR 2078
LI+ ++DS +V V+TAGAG QA++WLLGV GAS LLEA +PY +F + G Y S A +A A RA LC D VI + CTA +++ +P+RG H+ +V + T +G+ Y L LSKG RDR GE+ VSRL+L A+A A G+ + LLD D S E+ D D + + A C ++ +G++ + P+ +L G++NPLH GH+ L E A +LD E+ IFE++ N DK L EI R++QF+ Y V V+ AP F KARLFPG FV G DTA+RI+ PR+Y +SQ +M+SAL+EIR GC F+V R ++ G F G+ +PE R +F + FR D+SS+ +R
Sbjct: 21 LIQELHDSPG--RVMVATAGAGTQALAWLLGVAGASRTLLEALIPYEETSFNAFL--GQAPKKYVSPNTARLMAGRAVTRAQQLCQG-----------DVEVIGLACTATIITDRPKRGEHRAHVASWTRNGVTCYSLHLSKGARDRYGEEEVVSRLMLNALAKAYGIDT----RISLPLLDS-----DRYSYIED----------------------------------DFVGAVDHLYQENAEVC---------------------------IIRADGSLQKGINPKA---MLSGAFNPLHSGHLRLAETAAEILDQEV--------------------------------------------------------------------------IFELTAVNADKPSLEKTEILHRLLQFAGR------YLVVVSNAPTFVAKARLFPGTTFVTGYDTAERILQPRFYADSQDQMLSALAEIRERGCCFLVASRTNSQGIFHDASGLS----VPEGYRDLFKIIPAGRFRHDISSTELR 388
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Match: A0A2R6WER6_MARPO (CTP_transf_like domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WER6_MARPO) HSP 1 Score: 182 bits (462), Expect = 1.010e-46 Identity = 159/541 (29.39%), Postives = 233/541 (43.07%), Query Frame = 3
Query: 456 ALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAPGYCSREAAEGLARNAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGRGGGGDLPSVQEEEGEAWRGAAXXXXXXXXXXGEAETVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATNAAGEAGEPGAPVVVLREGAMVRAALPRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGEKPQKPTEADKAAAGWGREGEQRVQTDEGMGAGXXXXXXXXXXXDVDAGGGDVGHEERERKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGGVGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQVEMVSALSEIRHLGCSFIVGGREDAGGRFLTLDGVMAESGLPESLRSMFLGLDESSFREDLSSSSIR 2078
A++ A++ S +C+S G QA+ WLL VP AS+ +LE TVPY + + G + SRE+AE +A AY RA+ L +P V +G T A+ S+ P+RG H+CYV A+T GL LTLSKG+RDR GED SR+L++ +AD GV + +LP ++ E V + D + +E LV G+ T++V + EG + ++ + + V+L GS+NPLH GHV LLE A S+ + I FEISV N DK L + I++RV QF + G + +T P F +KA L P FVVG DTA R+I+P+YYG S+ M+ L I+HLGC F+V GR+ G +F V+ + +PE ++ +F + + SFR D+SS+ +R
Sbjct: 7 AVVEAIHASPTQAVLCLS--GGASQALGWLLSVPRASSTVLEVTVPYSRISMLQYL--GKAPLQFVSRESAEDIALAAYNRALRLS-----------MPGVPVAGIGFTGALASATPKRGDHRCYVAARTQTGLWECNLTLSKGKRDRIGEDEVTSRILIKTLADVCGVSL------------------ELPLGLDDGVEKLN------------------------VSNKNFTED-EQLEHLVEGK--TSMVSYAQS---------------------EGGIFQSGVRK---VVLSGSFNPLHEGHVKLLEVACSMCERSIP-------------------------------------------------------------------------CFEISVINADKPPLSLVSIKQRVKQFRDIGKT-----LVLTNQPYFYKKAELLPDSTFVVGVDTAIRLINPKYYGESRERMLEVLLGIKHLGCDFLVAGRK-VGEKFQ----VLGDLNVPEPVQELFRAIPDDSFRVDISSTELR 380 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1360.2155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1360.2155.1 >prot_E-siliculosus-1a_F_contig1360.2155.1 ID=prot_E-siliculosus-1a_F_contig1360.2155.1|Name=mRNA_E-siliculosus-1a_F_contig1360.2155.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=678bp MWLASPFSYLCSAAATTLSTAFAVPSSYSSLSLANVRHLTTSTTTTITSSback to top mRNA from alignment at E-siliculosus-1a_F_contig1360:24672..31372- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1360.2155.1 ID=mRNA_E-siliculosus-1a_F_contig1360.2155.1|Name=mRNA_E-siliculosus-1a_F_contig1360.2155.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6701bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1360:24672..31372- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1360:24672..31372- >mRNA_E-siliculosus-1a_F_contig1360.2155.1 ID=mRNA_E-siliculosus-1a_F_contig1360.2155.1|Name=mRNA_E-siliculosus-1a_F_contig1360.2155.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4068bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1360:24672..31372- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |