mRNA_E-siliculosus-1a_F_contig1357.2135.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1357.2135.1
Unique NamemRNA_E-siliculosus-1a_F_contig1357.2135.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: D7FM35_ECTSI (tRNA-dihydrouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM35_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 3.650e-98
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 3
Query:    3 GVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMALLPEGVLDEPVGDTPECAFGSHVRDD 434
            GVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFR+AVDRAMALLPEGVLDEPVGDTPECAFGS VRDD
Sbjct:  236 GVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFRDAVDRAMALLPEGVLDEPVGDTPECAFGSQVRDD 379          
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: A0A484ECZ8_BRELC (Dus domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECZ8_BRELC)

HSP 1 Score: 76.3 bits (186), Expect = 9.010e-13
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 3
Query:   12 GVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMALLPEGVLDEPVGD 395
            G+M+GRAAY +PW FR  D  +F +  +P  +RREI+ER ++   E+ ++     P       +    + KPL  L +G  G + F++E+S A  A+    P+    RE ++ A+ +LP+ VLDE V D
Sbjct:  247 GIMIGRAAYNNPWNFRDADRLIFDADRNPNLSRREIIERYLNYAEELQEKWGSNEPLSGSPYTMATSMLMKPLLSLFNGEFGGKAFKREVS-AQWAKKGPRPE---LREMIENAIKVLPDKVLDERVED 371          
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: A0A482RAJ6_9ARCH (tRNA dihydrouridine(20/20a) synthase DusA (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RAJ6_9ARCH)

HSP 1 Score: 66.6 bits (161), Expect = 2.500e-9
Identity = 46/143 (32.17%), Postives = 71/143 (49.65%), Query Frame = 3
Query:    6 VAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMALLPEGVLDEPVGDTPECA--FGSHVR 428
            +A VM+GRAAY +PW F   D  +FG  +PG +RRE++ + ++   E++     E  + N  R   L    KPL  L  GA+G   FR  L+R +  +          REAV+ A+  + +G L   V    + A  +  H+R
Sbjct:  356 LASVMIGRAAYNNPWIFADADRQLFGMPNPGLSRREVVSKYLEYTDELLASVAPEFADMNIYRPFELA---KPLLNLFHGAKGGGKFRTTLTRNLNEKRMR------AREAVEDALLGMTDGKLPRSVQRRRQLARRWRWHLR 489          
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: A0A6P4CE90_ARADU (tRNA-dihydrouridine synthase n=8 Tax=Arachis TaxID=3817 RepID=A0A6P4CE90_ARADU)

HSP 1 Score: 65.5 bits (158), Expect = 5.040e-9
Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = 3
Query:    3 GVAGVMVGRAAYFDPW-TFRHTDSAVFGSSDPGFTRREIMERC-VDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMALLPEGVLDEPVGDTPECAFG 416
            G  GVMVGRAAY +PW    H D+AV+G+S    TRR+++E+  V   + +M+ G   GP         L  +TKPL        G+  ++++   A+Q  S I       +  +D  +A++P+ VLD P+ ++  C  G
Sbjct:  229 GAHGVMVGRAAYNNPWHLLGHIDTAVYGASRSSLTRRQVLEKYQVYGDSVLMKYGL--GPT--------LRDITKPLLGFFHSEPGNGLWKRKADAAIQTCSTI-------KALLDETLAVIPDSVLDSPLAES-SCGRG 350          
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: A0A6P5ZVN0_DURZI (tRNA-dihydrouridine synthase n=2 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZVN0_DURZI)

HSP 1 Score: 65.1 bits (157), Expect = 6.080e-9
Identity = 41/134 (30.60%), Postives = 65/134 (48.51%), Query Frame = 3
Query:    3 GVAGVMVGRAAYFDPW-TFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMALLPEGVLDEPVGDTP 401
            G  GVMVGRAAY +PW T  H D+A++G+   G TRREI+ER  +    ++     + P         +  V KPL  L     G+  ++++   A Q  + +       +   +  +A +P+ VLD P+   P
Sbjct:  192 GAHGVMVGRAAYNNPWRTLGHVDTAIYGAPSSGLTRREILERYQEYGDHVLGRDGNKRPN--------VRDVAKPLLNLFYSEPGNGLWKRKADFAFQHCTTM-------KSFFEETLAAIPDSVLDSPIAGVP 310          
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: UPI0006849A1E (tRNA dihydrouridine(20/20a) synthase DusA n=1 Tax=Thermithiobacillus tepidarius TaxID=929 RepID=UPI0006849A1E)

HSP 1 Score: 65.1 bits (157), Expect = 6.310e-9
Identity = 48/135 (35.56%), Postives = 67/135 (49.63%), Query Frame = 3
Query:    6 VAGVMVGRAAYFDPWTFRHTDSAVFGSSDP-GFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMALLPEGVLDEPVGDTPEC 407
            V GVMVGRAAY DPW     D+ VFG       TRR+++ R +  + E +  G R            L  +T+ +  L  G  G+R +++ LS  +  + +  P      E +DRAMA L + VLD P  DTPE 
Sbjct:  224 VDGVMVGRAAYHDPWMLAQADARVFGRPPAVPLTRRQVI-RDMQAYAEDVLAGGR----------ATLHQITRHMLGLFHGEPGTRAWKRFLSTELH-RGRPGP------ELLDRAMAQLSDDVLDRPARDTPEA 340          
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: A0A6P5ZVE5_DURZI (uncharacterized protein LOC111304500 isoform X1 n=3 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZVE5_DURZI)

HSP 1 Score: 65.1 bits (157), Expect = 7.570e-9
Identity = 41/134 (30.60%), Postives = 65/134 (48.51%), Query Frame = 3
Query:    3 GVAGVMVGRAAYFDPW-TFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMALLPEGVLDEPVGDTP 401
            G  GVMVGRAAY +PW T  H D+A++G+   G TRREI+ER  +    ++     + P         +  V KPL  L     G+  ++++   A Q  + +       +   +  +A +P+ VLD P+   P
Sbjct:  286 GAHGVMVGRAAYNNPWRTLGHVDTAIYGAPSSGLTRREILERYQEYGDHVLGRDGNKRPN--------VRDVAKPLLNLFYSEPGNGLWKRKADFAFQHCTTM-------KSFFEETLAAIPDSVLDSPIAGVP 404          
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: A0A067CH99_SAPPC (Dus domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CH99_SAPPC)

HSP 1 Score: 63.9 bits (154), Expect = 1.650e-8
Identity = 40/129 (31.01%), Postives = 63/129 (48.84%), Query Frame = 3
Query:   12 GVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMA-LLPEGVLDEPVGD 395
            GVM+GRAAY +PW FR  D  +F   +PGF+RREI+   +D   EM     +   E      +   T+ KP+  L  G  G +  ++ ++    A+     +  + R+ V+ A+   +P  VLD    D
Sbjct:  236 GVMIGRAAYNNPWNFRDADRLLFDCENPGFSRREIIATYLDYAEEMQATWGKRRREVGEYA-MPTSTLLKPILNLFLGEYGGKAMKRHIANRWSAKG----EQPELRDLVETAIEECIPSAVLDATAKD 359          
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: A0A5B7BMY3_DAVIN (Putative tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like isoform X1 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BMY3_DAVIN)

HSP 1 Score: 63.5 bits (153), Expect = 2.540e-8
Identity = 42/148 (28.38%), Postives = 70/148 (47.30%), Query Frame = 3
Query:    3 GVAGVMVGRAAYFDPW-TFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMALLPEGVLDEPVGDTPECAFGSHVRDD*LV 443
            G  GVMVGRAAY +PW T  H D+ V+G+   G TRR+++E+       ++ +    GP+ +      +  V KPL  L     G+  ++++   A Q  + I       +   +  +  +P+ VLD PVG+ P     +      L+
Sbjct:  285 GAHGVMVGRAAYHNPWYTLGHVDTVVYGAPCSGLTRRQVLEQYQVYGDSVLGK---YGPKPS------VRDVAKPLLGLFHSEPGNGLWKRKADSAFQHCTTI-------KSFFEETLVAIPDSVLDSPVGEAPSGCINAFANSKRLL 416          
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Match: A0A8K0DV91_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0DV91_9ROSA)

HSP 1 Score: 63.2 bits (152), Expect = 3.600e-8
Identity = 42/138 (30.43%), Postives = 66/138 (47.83%), Query Frame = 3
Query:    3 GVAGVMVGRAAYFDPWTFR-HTDSAVFGSSDPGFTRREIMERC-VDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFREAVDRAMALLPEGVLDEPVGDTPECA 410
            G  GVMVGRAAY +PW    H D+AV+G+   G TRR+I+E   V   + + + GRR            +  V KPL        G+  ++++   A Q  + +       +   D  +  +P+ VLD P+G+ P  +
Sbjct:  229 GAHGVMVGRAAYSNPWKILGHVDTAVYGAPSSGITRRQIIEEYQVYGDSVLGKYGRRPN----------IRDVIKPLLGFFYSEPGNSLWKRKADAAFQTCTTV-------KSFFDETLVAIPDSVLDSPIGELPSAS 349          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM35_ECTSI3.650e-9898.61tRNA-dihydrouridine synthase n=2 Tax=Ectocarpus Ta... [more]
A0A484ECZ8_BRELC9.010e-1334.88Dus domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A482RAJ6_9ARCH2.500e-932.17tRNA dihydrouridine(20/20a) synthase DusA (Fragmen... [more]
A0A6P4CE90_ARADU5.040e-932.86tRNA-dihydrouridine synthase n=8 Tax=Arachis TaxID... [more]
A0A6P5ZVN0_DURZI6.080e-930.60tRNA-dihydrouridine synthase n=2 Tax=Durio zibethi... [more]
UPI0006849A1E6.310e-935.56tRNA dihydrouridine(20/20a) synthase DusA n=1 Tax=... [more]
A0A6P5ZVE5_DURZI7.570e-930.60uncharacterized protein LOC111304500 isoform X1 n=... [more]
A0A067CH99_SAPPC1.650e-831.01Dus domain-containing protein n=1 Tax=Saprolegnia ... [more]
A0A5B7BMY3_DAVIN2.540e-828.38Putative tRNA-dihydrouridine(20a/20b) synthase [NA... [more]
A0A8K0DV91_9ROSA3.600e-830.43Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1357contigE-siliculosus-1a_F_contig1357:31055..32665 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size420
Model size624
Exons3
Ec32 orthologEc-01_010520.1
Ec32 ortholog descriptiontRNA-dihydrouridine synthase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko03016
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EC1.3.1.88
EggNOG OGsCOG0042@1,KOG2335@2759
EggNOG free text desc.tRNA dihydrouridine synthase activity
KEGG koko:K05539,ko:K05542
Seed eggNOG ortholog2880.D7FM35
Seed ortholog evalue1.3e-75
Seed ortholog score288.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1357.2135.1prot_E-siliculosus-1a_F_contig1357.2135.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1357 31242..32648 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927872.1381433-UTR-E-siliculosus-1a_F_contig1357:31054..312411622927872.1381433-UTR-E-siliculosus-1a_F_contig1357:31054..31241Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1357 31055..31241 -
1696318717.4576077-UTR-E-siliculosus-1a_F_contig1357:31054..312411696318717.4576077-UTR-E-siliculosus-1a_F_contig1357:31054..31241Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1357 31055..31241 -
1622927872.2198107-UTR-E-siliculosus-1a_F_contig1357:32648..326651622927872.2198107-UTR-E-siliculosus-1a_F_contig1357:32648..32665Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1357 32649..32665 -
1696318717.496531-UTR-E-siliculosus-1a_F_contig1357:32648..326651696318717.496531-UTR-E-siliculosus-1a_F_contig1357:32648..32665Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1357 32649..32665 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927872.1591547-CDS-E-siliculosus-1a_F_contig1357:31241..314271622927872.1591547-CDS-E-siliculosus-1a_F_contig1357:31241..31427Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1357 31242..31427 -
1696318717.4699712-CDS-E-siliculosus-1a_F_contig1357:31241..314271696318717.4699712-CDS-E-siliculosus-1a_F_contig1357:31241..31427Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1357 31242..31427 -
1622927872.1815534-CDS-E-siliculosus-1a_F_contig1357:32146..323011622927872.1815534-CDS-E-siliculosus-1a_F_contig1357:32146..32301Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1357 32147..32301 -
1696318717.4805546-CDS-E-siliculosus-1a_F_contig1357:32146..323011696318717.4805546-CDS-E-siliculosus-1a_F_contig1357:32146..32301Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1357 32147..32301 -
1622927872.2015178-CDS-E-siliculosus-1a_F_contig1357:32569..326481622927872.2015178-CDS-E-siliculosus-1a_F_contig1357:32569..32648Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1357 32570..32648 -
1696318717.4885294-CDS-E-siliculosus-1a_F_contig1357:32569..326481696318717.4885294-CDS-E-siliculosus-1a_F_contig1357:32569..32648Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1357 32570..32648 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1357.2135.1

>prot_E-siliculosus-1a_F_contig1357.2135.1 ID=prot_E-siliculosus-1a_F_contig1357.2135.1|Name=mRNA_E-siliculosus-1a_F_contig1357.2135.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=140bp
MVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRR
EGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPD
TDDFREAVDRAMALLPEGVLDEPVGDTPECAFGSHVRDD*
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mRNA from alignment at E-siliculosus-1a_F_contig1357:31055..32665-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1357.2135.1 ID=mRNA_E-siliculosus-1a_F_contig1357.2135.1|Name=mRNA_E-siliculosus-1a_F_contig1357.2135.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1611bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1357:31055..32665- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCGGCGTCGCCGGGGTCATGGTGGGGCGCGCGGCGTACTTCGACCCCTGG ACGTTTCGGCATACGGACAGCGCCGTTTTTGGGTCGTCAGACCCAGGTGC GCGTGGTGTTTTCTCCCGCTGTTAGGTACTTCTGATGAGAGTGTTGAAAA ACGCAGGTAGCGATAGAACGAGCGACAATTTCGGGGCTGGGTATGACCCA ACCGCCCCCAGCTTTAGTGGGGCACACTTGTGGGGCTTGTTAGACCCTGC TAGGGGTCCTACCCTGCCTGCGTTGTGACCCTTAAACGGGACTAGAACCC GTTTGTGTGTGTGGTAGCGGCGTGCAATTAACGGCCTTTCTGCCCGCCGT GTGTGTCGCTGCAGGGTTCACGAGGCGGGAGATAATGGAACGCTGCGTGG ACAGGTTCACGGAGATGATGCAGGAAGGCCGGCGGGAGGGGCCGGAGTGC AACCGAACCCGGCATCTCTGCCTCGGCACCGTCACGAAGCCTCTAGGGTA CCTCTCTTCCGGCGCGAGGGTGAGAGCGAGAGCGCGTACAACCAAACACG CTGCGTTTCTTTTTGTGTGTGTTGGGGGTAATGATGGAACGCTGCCCTGT GCGTATGTTGTGGGTACGCAGTCTGAGTAAGAAGAATCGCTCATGGCCAG CTGTGCGCACCTCAAAAGAGGGCACGTTATTTCCACGAAATACGACGGTT TGGTTGCGTTGCGCACGTACCTTTCGTAGCCTTTGCCCCGCAAAACTCGT TTCTTCACACGACGTTGTATTGTGAAGACAACAGCACAACAAAATCAACA TGCCTTTCCGTTTCCGGGTATCATCGCTAGGGTCGAGGTGAACGCCCGGA GTCGGCGTTTTCGTGGGGCTAGTGTAGTGTTATCGCGCGGGGGGTGGCGT GGAACAACCCTAGACTATGCGATGAGCATGAAACGAGGTGTCATGGTTCG GTATGGGTACGTTCGTCACATGGTCATGGTTGCATGGCACACGGTGTGGC GGCGACAGCCAGCGTAAGACACGAGACGCTCCTGGCACCTTTTTACGTGC GCGAAATCTACGCCACGGAGAAACTGGTGACCACTCCATTTTTTCCCAAT TCACGGCCGCGCGCACGTACGCTCACGTATATACCGCCGCCTCAATACTT TGTTTCCTCTCCCGAGCTAATCTCTTGCTCTTTCTCGCTGTTCCTCTGCA CCTCCTTCTTGTTCGTGCGTGCGGCCCAAACACCGCAGGGCAGCAGAACG TTTAGGCAGGAGTTGAGCCGCGCCGTGCAGGCTCAGTCGAAGATCGACCC TGACACGGACGACTTCCGAGAAGCTGTGGATCGGGCCATGGCACTCCTCC CGGAGGGGGTGCTGGACGAGCCCGTGGGGGACACGCCAGAGTGCGCCTTT GGCTCGCACGTTCGCGACGATTAGTTAGTTCTTTGATGAGGAAAGTGGAG TTGGTTGAAGGTGTGCCAGCACCCTGTAAAACCGGTGGTGATGGTGTTTT GGAGGTTAGGACGAGGAGGTTTCCGATCTACCGTATATGACACAAGATAA CACACCCCCTTGGCCGATTTTCAAAGCTCGATTTCTCAACAGCAGGAAGA CTCACAGCGCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1357:31055..32665-

>mRNA_E-siliculosus-1a_F_contig1357.2135.1 ID=mRNA_E-siliculosus-1a_F_contig1357.2135.1|Name=mRNA_E-siliculosus-1a_F_contig1357.2135.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=840bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1357:31055..32665- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTGGGGCGCGCGGCGTACTTCGACCCCTGGACGTTTCGGCATACGGA
CAGCGCCGTTTTTGGGTCGTCAGACCCAGATGGTGGGGCGCGCGGCGTAC
TTCGACCCCTGGACGTTTCGGCATACGGACAGCGCCGTTTTTGGGTCGTC
AGACCCAGGGTTCACGAGGCGGGAGATAATGGAACGCTGCGTGGACAGGT
TCACGGAGATGATGCAGGAAGGCCGGCGGGAGGGGCCGGAGTGCAACCGA
ACCCGGCATCTCTGCCTCGGCACCGTCACGAAGCCTCTAGGGTACCTCTC
TTCCGGCGCGAGGGGTTCACGAGGCGGGAGATAATGGAACGCTGCGTGGA
CAGGTTCACGGAGATGATGCAGGAAGGCCGGCGGGAGGGGCCGGAGTGCA
ACCGAACCCGGCATCTCTGCCTCGGCACCGTCACGAAGCCTCTAGGGTAC
CTCTCTTCCGGCGCGAGGGGCAGCAGAACGTTTAGGCAGGAGTTGAGCCG
CGCCGTGCAGGCTCAGTCGAAGATCGACCCTGACACGGACGACTTCCGAG
AAGCTGTGGATCGGGCCATGGCACTCCTCCCGGAGGGGGTGCTGGACGAG
CCCGTGGGGGACACGCCAGAGTGCGCCTTTGGCTCGCACGTTCGCGACGA
TTAGGGCAGCAGAACGTTTAGGCAGGAGTTGAGCCGCGCCGTGCAGGCTC
AGTCGAAGATCGACCCTGACACGGACGACTTCCGAGAAGCTGTGGATCGG
GCCATGGCACTCCTCCCGGAGGGGGTGCTGGACGAGCCCGTGGGGGACAC
GCCAGAGTGCGCCTTTGGCTCGCACGTTCGCGACGATTAG
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