mRNA_E-siliculosus-1a_F_contig1357.2129.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: D7FM30_ECTSI (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM30_ECTSI) HSP 1 Score: 237 bits (605), Expect = 5.060e-73 Identity = 119/124 (95.97%), Postives = 121/124 (97.58%), Query Frame = 1
Query: 13 QVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLNKVREGS 384
QVVLLDHGMYRRL+PDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLNK G+
Sbjct: 353 QVVLLDHGMYRRLDPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLNKDLGGT 476
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: A0A835ZCM7_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM7_9STRA) HSP 1 Score: 151 bits (381), Expect = 3.080e-40 Identity = 84/159 (52.83%), Postives = 98/159 (61.64%), Query Frame = 1
Query: 13 QVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILS-----------------------------------HDSLNAFLERLPRDMLFVMRTSDLVRSLNKVREGS 384
QVVLLDHGMYRRLEPDFRL Y +LWKAF+TRDT LG++ AV LG+ P YDALSL+LTWRP +T G RITEEER L KYK ++S ++N FLERLPRDMLFV+RTSDL+R LNK G+
Sbjct: 379 QVVLLDHGMYRRLEPDFRLAYCRLWKAFLTRDTKLGKQQAVILGLTPDEYDALSLVLTWRPATTKTPMGTRITEEERARLREKYKGVVSAXXXXXXXXXXXXXXXXAQAEXXXXXXXXXXXXXXXXAVNNFLERLPRDMLFVLRTSDLIRGLNKDLGGT 537
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: A0A7S0IIF7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IIF7_9EUKA) HSP 1 Score: 127 bits (318), Expect = 2.280e-32 Identity = 69/128 (53.91%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 1 GARAQVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLNKVREGS 384
G RAQ+VLLDHGMYRRL +FR Y +LW A + RD G A LGVE Y+ LSL+LT RP +TA TG ++ ERQA+ A+Y+ + + +N FL RLPRDMLFVMRT LVRSLN+ G+
Sbjct: 213 GGRAQLVLLDHGMYRRLSANFRSEYCRLWMALLARDAREGRAAARALGVEADDYETLSLLLTHRPPDSTAPTGSNMSAAERQAVRARYRSYGAAE-VNTFLHRLPRDMLFVMRTWSLVRSLNRRLGGT 339
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: A0A0G4GUZ7_VITBC (ABC1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GUZ7_VITBC) HSP 1 Score: 125 bits (313), Expect = 9.240e-31 Identity = 62/123 (50.41%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 1 GARAQVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPT-STTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLN 366
G R Q+V+LDHGMYRRLEP FR YS+LWKA + +D +G + VDL ++ +D LSLILT+RPT S + GQR+ EE+R+ + K+K + +++N FL+ LPRD+L++ RT+++VRSLN
Sbjct: 367 GVRPQLVVLDHGMYRRLEPSFRHAYSRLWKALVMQDEHVGRQACVDLNLDEDAFDMLSLILTFRPTKSKFTKLGQRMHEEDRKVVKEKFKKTTA-EAINDFLKSLPRDILYIFRTTNIVRSLN 488
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: A0A7S2V1K6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1K6_9STRA) HSP 1 Score: 117 bits (293), Expect = 4.140e-30 Identity = 57/124 (45.97%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 13 QVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLNKVREGS 384
Q+VLLDHGMYRRL+ +FR TY +LWKA + RD L + LG++ Y+ LSL T+R ++ GQR+T EER+AL KY+ + + +N FL +PRDML+V R+++L+RS+N+ G+
Sbjct: 32 QLVLLDHGMYRRLDSEFRTTYCELWKAMIIRDNHLAKASLAKLGMDAKYYEPLSLWFTYRTPTSKKGVGQRLTIEERRALRKKYEKGATREEVNVFLRSMPRDMLYVSRSNNLIRSINRQLGGT 155
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: A0A7S2UZ90_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ90_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.950e-29 Identity = 57/124 (45.97%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 13 QVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLNKVREGS 384
Q+VLLDHGMYRRL+ +FR TY +LWKA + RD L + LG++ Y+ LSL T+R ++ GQR+T EER+AL KY+ + + +N FL +PRDML+V R+++L+RS+N+ G+
Sbjct: 127 QLVLLDHGMYRRLDSEFRTTYCELWKAMIIRDNHLAKASLAKLGMDAKYYEPLSLWFTYRTPTSKKGVGQRLTIEERRALRKKYEKGATREEVNVFLRSMPRDMLYVSRSNNLIRSINRQLGGT 250
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: A0A7S2RKL7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RKL7_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.600e-28 Identity = 56/122 (45.90%), Postives = 86/122 (70.49%), Query Frame = 1
Query: 1 GARAQVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLN 366
G Q+V+LDHGMYRR EP+FR TY +LW++ + D G++ A+ LGV YD LSLI T RP ++ + G+R+ + ER+ + A++K + + D +N FL+ LPRD+LFV+R +++VRS+N
Sbjct: 410 GEAYQLVILDHGMYRRFEPEFRTTYCQLWQSLLMADIKHGKQAAIKLGVPSDGYDVLSLIFTHRPANSQTKIGKRMQKAEREKMRAQFKDVSAAD-INVFLQNLPRDLLFVLRCTNIVRSIN 530
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: R1FRR0_EMIHU (Ubiquinone biosynthesis protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FRR0_EMIHU) HSP 1 Score: 109 bits (272), Expect = 2.890e-25 Identity = 63/153 (41.18%), Postives = 85/153 (55.56%), Query Frame = 1
Query: 10 AQVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVI----------------------------LSHDSLNAFLERLPRDMLFVMRTSDLVRSLNKVREGS 384
AQ+VLLDHG+YRRL D+RL Y++LW A + +D A G A LGV P Y+ L++ LT+RP + A G ++ ER+A+ +Y + L+ +NAFL RLPRDMLFVMRT LVRSLN+ G+
Sbjct: 350 AQLVLLDHGLYRRLSEDYRLAYAQLWCALLAQDDAAGRAAASALGVPPDDYETLAIALTFRPPGSRAPLGSGMSATERRAIRERYASVGPAEADGMPRCASALSRLDLGSTSAQSRLNLGQVNAFLGRLPRDMLFVMRTWGLVRSLNRALGGT 502
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: K3W889_GLOUD (ABC1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W889_GLOUD) HSP 1 Score: 106 bits (264), Expect = 2.840e-24 Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 7 RAQVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLNKVREGS 384
+ Q+VLLDHG+YR L+ DFR TY LW+A + RDTAL E C+ L V L L+ T+R S+T +TE E++ L K L S+ FLE+LPRDMLFV RT++++RSLNK GS
Sbjct: 326 KEQLVLLDHGLYRELDDDFRKTYCDLWRAMLLRDTALLEDCSKRLNVG-AFAKYLPLLFTYRTISSTTPLASSMTEGEKKELTEDLKK-LQFSSVTDFLEQLPRDMLFVFRTNNMIRSLNKDLGGS 449
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Match: A0A0G4FH32_9ALVE (ABC1 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FH32_9ALVE) HSP 1 Score: 103 bits (258), Expect = 2.530e-23 Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = 1
Query: 13 QVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPT-STTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVRSLN 366
Q+VLLDHGMYRRL PDFR Y +LW+A +T+D ++G A+ LG++ ++ LSL+ T+R + S R G R+ +E+RQ + + D +N FL LPRD+L+V+R +++VRSLN
Sbjct: 397 QIVLLDHGMYRRLTPDFRKGYCQLWEALVTQDESVGREAAIRLGLDERGFELLSLVFTFRSSKSKRTRLGSRMHDEDRQRARDSIQGTTAGD-INEFLRGLPRDVLWVLRATNIVRSLN 514 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1357.2129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1357.2129.1 >prot_E-siliculosus-1a_F_contig1357.2129.1 ID=prot_E-siliculosus-1a_F_contig1357.2129.1|Name=mRNA_E-siliculosus-1a_F_contig1357.2129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=128bp GARAQVVLLDHGMYRRLEPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEback to top mRNA from alignment at E-siliculosus-1a_F_contig1357:55..877+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1357.2129.1 ID=mRNA_E-siliculosus-1a_F_contig1357.2129.1|Name=mRNA_E-siliculosus-1a_F_contig1357.2129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=823bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1357:55..877+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1357:55..877+ >mRNA_E-siliculosus-1a_F_contig1357.2129.1 ID=mRNA_E-siliculosus-1a_F_contig1357.2129.1|Name=mRNA_E-siliculosus-1a_F_contig1357.2129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=768bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1357:55..877+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |