mRNA_E-siliculosus-1a_F_contig13563.2127.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig13563.2127.1
Unique NamemRNA_E-siliculosus-1a_F_contig13563.2127.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: A0A0F9UTS9_9ZZZZ (Peptidase_M48 domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9UTS9_9ZZZZ)

HSP 1 Score: 679 bits (1753), Expect = 1.150e-243
Identity = 363/391 (92.84%), Postives = 375/391 (95.91%), Query Frame = 1 
Query:    1 VTVMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            +TVMVDSRSLNAFAVPGGVVG+NSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEAD+IGLQAMAEAGYDPQAMVRMFA MQRMARLQGN PPEFLLTHPVTDNRLSAAQ+RAAQLNVAD+YTSDILYDMMRARALLSIHSNTPQQAA+RLAQEGAEDVAQRYL ALI ARNGQ+DSALQ LDQLASEQPDYAMLPTSAA VA EAGRY     RSQRLLRLMPNYLPAQLS+AEAQLQRDPQAAY LLRDIT+RNPENPQGFNLLAEAAGRSG NGWGHLARAE+LQLTGRVDSGIRQL+IARDAAQRENDT ALARIEQRRE F+EYREALEKF
Sbjct:   96 ITVMVDSRSLNAFAVPGGVVGVNSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADNIGLQAMAEAGYDPQAMVRMFAAMQRMARLQGNAPPEFLLTHPVTDNRLSAAQSRAAQLNVADSYTSDILYDMMRARALLSIHSNTPQQAATRLAQEGAEDVAQRYLGALIEARNGQVDSALQHLDQLASEQPDYAMLPTSAAMVAFEAGRYDDAIQRSQRLLRLMPNYLPAQLSMAEAQLQRDPQAAYTLLRDITARNPENPQGFNLLAEAAGRSGFNGWGHLARAEYLQLTGRVDSGIRQLTIARDAAQRENDTLALARIEQRREAFLEYREALEKF 486
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: A0A6I7N1N3_HALSX (Putative beta-barrel assembly-enhancing protease n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A6I7N1N3_HALSX)

HSP 1 Score: 627 bits (1617), Expect = 5.690e-223
Identity = 341/391 (87.21%), Postives = 370/391 (94.63%), Query Frame = 1 
Query:    1 VTVMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            +TVMVDSRSLNAFAVPGGVVGINSGLFAFA+DEGAFVSVLAHELGHL+QRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAG+AAAMGSQAAL+QD+L YSRLFEQEAD+IGLQAMA+AGYDPQAMVRMF++MQRMARLQG+ PPEFLLTHPVT++RLSAAQARAAQL VAD YTS+ LY+MMRARALLSIH+NTPQQAASRLAQ+ A + AQRYL ALI ARNG+ DSALQ LDQL++EQPD+AMLP SAATVALE+   XXXXX SQRLLRLMPNYLPAQL LAEAQLQRDP AAY+LLRDIT+R+PENPQGFNLLAEAAGRSG++GWGHLARAEHLQLTGRVD GIRQLSIARDAAQREND QALARIEQRRE+FIEYREALEKF
Sbjct:   96 ITVMVDSRSLNAFAVPGGVVGINSGLFAFADDEGAFVSVLAHELGHLAQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGVAAAMGSQAALMQDRLRYSRLFEQEADNIGLQAMADAGYDPQAMVRMFSSMQRMARLQGDAPPEFLLTHPVTESRLSAAQARAAQLEVADAYTSNTLYEMMRARALLSIHTNTPQQAASRLAQDDAGETAQRYLDALIAARNGETDSALQRLDQLSNEQPDFAMLPASAATVALESXXXXXXXXXSQRLLRLMPNYLPAQLVLAEAQLQRDPPAAYSLLRDITARHPENPQGFNLLAEAAGRSGYDGWGHLARAEHLQLTGRVDRGIRQLSIARDAAQRENDEQALARIEQRREEFIEYREALEKF 486
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: A0A060AZZ5_9GAMM (Putative beta-barrel assembly-enhancing protease n=15 Tax=Halomonadaceae TaxID=28256 RepID=A0A060AZZ5_9GAMM)

HSP 1 Score: 622 bits (1603), Expect = 7.660e-221
Identity = 332/390 (85.13%), Postives = 355/390 (91.03%), Query Frame = 1 
Query:    4 TVMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            TVMVD+ SLNAFAVPGGV+GINSGLFAFAEDEGAFVSV+AHELGHLSQRHYARGSARA QTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQL+YSR FEQEAD +GLQAMA AGY+P AMVRMF  MQRMARLQG TPPEFLLTHPV+D+RLS AQARA+QLN+AD YTSD LYDMMRARALLSI+ NTPQQAASRLAQE +E+ AQRYL+ALI ARNGQ D+ALQ +DQLA E PDY MLP SAATVALEA RY     RSQRLLR+MPNYLPAQL LAEAQLQRDPQAAY LLRDIT ++PE PQGFNLLAEAAGRSG+NGWGHLARAEHLQLTGR+D GIRQLSIA+DAAQ+END QALARIEQRRE FIEYREALEKF
Sbjct:   97 TVMVDNGSLNAFAVPGGVIGINSGLFAFAEDEGAFVSVIAHELGHLSQRHYARGSARAEQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLSYSRRFEQEADRVGLQAMASAGYNPDAMVRMFGAMQRMARLQGGTPPEFLLTHPVSDSRLSDAQARASQLNIADAYTSDTLYDMMRARALLSIYHNTPQQAASRLAQENSEEQAQRYLSALIAARNGQTDNALQTIDQLARELPDYGMLPASAATVALEAQRYEDAITRSQRLLRIMPNYLPAQLVLAEAQLQRDPQAAYELLRDITDQHPETPQGFNLLAEAAGRSGYNGWGHLARAEHLQLTGRIDRGIRQLSIAKDAAQQENDQQALARIEQRREAFIEYREALEKF 486
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: UPI001CC383A1 (M48 family metalloprotease n=1 Tax=Halomonas aquamarina TaxID=77097 RepID=UPI001CC383A1)

HSP 1 Score: 612 bits (1578), Expect = 4.860e-217
Identity = 325/391 (83.12%), Postives = 356/391 (91.05%), Query Frame = 1 
Query:    1 VTVMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            +TVMVD+RSLNAFAVPGGV+GINSGLFAFAEDEGAFVSV+AHELGHLSQRHYARGSARA QTQLPAMAAMLAGML+AASGGGDAG+AAAMGSQAALIQDQLTYSR FEQEAD +GLQAMA AGYDPQAMVRMFA MQRMARLQG TPPEFLLTHPV+D+RLS AQARA+QL++ADT+TSD LYDMMRARALLSI+ N+PQQAASRLAQEGAE+ A+RYL ALI ARNGQ D ALQ +DQLA+E PDY MLP + A++ALEA RY     RSQRLLR MP YLPAQL LAEAQLQRDP AAY+LL DIT+R+PENPQGFNLLAEAAGRSGH+ WGHLARAE+LQLTGRVD GIRQLS+ARD A+RENDTQALARIEQRRE FIEYR+AL+ F
Sbjct:   96 ITVMVDNRSLNAFAVPGGVIGINSGLFAFAEDEGAFVSVIAHELGHLSQRHYARGSARAEQTQLPAMAAMLAGMLVAASGGGDAGLAAAMGSQAALIQDQLTYSRRFEQEADRVGLQAMANAGYDPQAMVRMFAAMQRMARLQGGTPPEFLLTHPVSDSRLSDAQARASQLSIADTHTSDTLYDMMRARALLSIYRNSPQQAASRLAQEGAEEPARRYLDALIAARNGQSDRALQMIDQLATELPDYGMLPATGASLALEAQRYDDAISRSQRLLRFMPGYLPAQLVLAEAQLQRDPNAAYSLLNDITARHPENPQGFNLLAEAAGRSGHDSWGHLARAEYLQLTGRVDQGIRQLSLARDTAERENDTQALARIEQRREAFIEYRKALDDF 486
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: A0A0D7UZH0_9GAMM (Putative beta-barrel assembly-enhancing protease n=22 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D7UZH0_9GAMM)

HSP 1 Score: 610 bits (1574), Expect = 1.970e-216
Identity = 328/390 (84.10%), Postives = 356/390 (91.28%), Query Frame = 1 
Query:    4 TVMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            TVMVD+RSLNAFAVPGGVVGINSGLFAFAEDEGAFVSV+AHELGHLSQRHYARGSARA QTQLPAMAAMLAGMLIAASGGGDAG+A A+GSQAALIQDQLTYSR FEQEAD IGLQAMAEAGYDP+AMVRMF TMQR++RLQG TPPEFLLTHPV+D+RLS AQAR +QL+VA+ YTSD LYDMMRARALLSI+ N+PQQAASRLAQE AE+ A RY+ ALI+A NGQ D ALQ LDQLA+E PDY MLP SAA VALEA RY     RSQRLLRLMP+YLPAQL+LAEAQLQRDP+AAY LLRDIT+++PE+PQGFNLLAEAAGRSG NGWGHLARAEHLQLTGRVD GIRQLSIA+DAAQ+END QALARIEQRRE F+EYREALEKF
Sbjct:   97 TVMVDNRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVIAHELGHLSQRHYARGSARAEQTQLPAMAAMLAGMLIAASGGGDAGIATAIGSQAALIQDQLTYSRRFEQEADRIGLQAMAEAGYDPEAMVRMFDTMQRLSRLQGGTPPEFLLTHPVSDSRLSDAQARVSQLSVANRYTSDTLYDMMRARALLSIYRNSPQQAASRLAQEDAEEPALRYINALIDAHNGQTDRALQTLDQLANELPDYGMLPASAANVALEAQRYDEAISRSQRLLRLMPHYLPAQLTLAEAQLQRDPEAAYELLRDITTQHPESPQGFNLLAEAAGRSGFNGWGHLARAEHLQLTGRVDRGIRQLSIAKDAAQQENDQQALARIEQRREAFMEYREALEKF 486
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: A0A2T0V9M0_9GAMM (Putative beta-barrel assembly-enhancing protease n=4 Tax=Halomonas TaxID=2745 RepID=A0A2T0V9M0_9GAMM)

HSP 1 Score: 607 bits (1565), Expect = 4.610e-215
Identity = 324/390 (83.08%), Postives = 354/390 (90.77%), Query Frame = 1 
Query:    4 TVMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            TVMVD+RSLNAFAVPGGV+GINSGLFAFAEDEGAFVSV+AHELGHLSQRHYARGSARA QTQLPAMAAMLAGML+AASGGGDAG+AAAMGSQAALIQDQLTYSR FEQEAD IGLQAMA+AGYDP+AMVRMFA MQRMARLQG TPPEFLLTHPV+D+RLS AQARA+QL+VA+ +TSD LYDMMRARALLSI+SN+PQQAASRLAQEGAE+ A+RYL ALI ARNGQ D ALQ +DQLA+E PDY MLP + A++ALEA RY     RSQRLLR MP YLPAQL LAEAQLQRDP  AY LL +IT+R+PENPQGFNLLAEAAGRSGHN WGHLARAEHLQLTGRVD GIRQLS+A+DAA+REND QALARIEQRRE FIEYR+AL+ F
Sbjct:   97 TVMVDNRSLNAFAVPGGVIGINSGLFAFAEDEGAFVSVIAHELGHLSQRHYARGSARAEQTQLPAMAAMLAGMLVAASGGGDAGLAAAMGSQAALIQDQLTYSRRFEQEADRIGLQAMADAGYDPEAMVRMFAAMQRMARLQGGTPPEFLLTHPVSDSRLSDAQARASQLSVANAHTSDTLYDMMRARALLSIYSNSPQQAASRLAQEGAEEPARRYLDALIAARNGQADRALQMIDQLAAELPDYGMLPATGASLALEAQRYDDAISRSQRLLRFMPGYLPAQLVLAEAQLQRDPNDAYALLNEITARHPENPQGFNLLAEAAGRSGHNSWGHLARAEHLQLTGRVDQGIRQLSLAQDAAERENDQQALARIEQRREAFIEYRKALDDF 486
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: H0J6F4_9GAMM (Putative beta-barrel assembly-enhancing protease n=4 Tax=Halomonas TaxID=2745 RepID=H0J6F4_9GAMM)

HSP 1 Score: 605 bits (1560), Expect = 2.650e-214
Identity = 326/389 (83.80%), Postives = 352/389 (90.49%), Query Frame = 1 
Query:    7 VMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            VMVD+RSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARA QTQLPAMAAMLAGMLIAASGGGDAG+AAAMGSQAALIQDQL+YSR FEQEAD IGLQAMA AGYDP+AMVRMF  MQRMARLQG +PPEFLLTHPV+D+RLS AQARA+QL VADTYTSD LYDMMRARALLSI+ N PQQAASR A EGAE+ AQRYL+ALI A NGQ DSAL  LDQLA E PDY+MLP SAA++AL+A RY     RSQRLLRL P+YLPAQL LAEAQLQR+P+AAY+LLRDIT+R+PENPQGF+LLAEAAGRSG NGW HLARAEHLQLTGR+D GIRQLSIA+DAAQ+END QALARIEQRRE FI YREAL+KF
Sbjct:   98 VMVDNRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAEQTQLPAMAAMLAGMLIAASGGGDAGIAAAMGSQAALIQDQLSYSRRFEQEADRIGLQAMANAGYDPEAMVRMFGAMQRMARLQGGSPPEFLLTHPVSDSRLSDAQARASQLQVADTYTSDTLYDMMRARALLSINRNNPQQAASRFAXEGAEEPAQRYLSALIAAHNGQTDSALNTLDQLARELPDYSMLPASAASIALDAQRYDDAITRSQRLLRLSPSYLPAQLVLAEAQLQRNPEAAYSLLRDITARHPENPQGFSLLAEAAGRSGDNGWAHLARAEHLQLTGRIDRGIRQLSIAKDAAQQENDQQALARIEQRREAFIGYREALDKF 486
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: UPI0017889FA1 (M48 family metalloprotease n=3 Tax=Halomonas TaxID=2745 RepID=UPI0017889FA1)

HSP 1 Score: 605 bits (1559), Expect = 3.770e-214
Identity = 322/390 (82.56%), Postives = 355/390 (91.03%), Query Frame = 1 
Query:    4 TVMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            TVMVD+RSLNAFAVPGGV+GINSGLFAFAEDEGAFVSV+AHELGHLSQRHYARGSARA QTQLPAMAAMLAGML+AASGGGDAG+AAAMGSQAALIQDQLTYSR +EQEAD IGLQAMA+AGYDP+AMVRMF+ MQRMARLQG TPPEFLLTHPV+D+RLS AQARA+QL+VA+ YTSD LYDMMRARALLSI+SN+P QA S LAQEGAE+ A+RYL ALI  RNGQ DSALQ LDQLA+E PDYAMLP SAA++ALEA RY     RSQRLLR+MP YLPAQL+LAEAQLQRDP+AAY LL +IT+R+P++PQGFNLLAEAAGRSGH  WGHLARAE LQLTGRVD GIRQLSIARDAA+RE++ QALARIEQRRE FIEYR+ALE F
Sbjct:   97 TVMVDNRSLNAFAVPGGVIGINSGLFAFAEDEGAFVSVIAHELGHLSQRHYARGSARAEQTQLPAMAAMLAGMLVAASGGGDAGIAAAMGSQAALIQDQLTYSRRYEQEADHIGLQAMADAGYDPEAMVRMFSAMQRMARLQGGTPPEFLLTHPVSDSRLSDAQARASQLSVANAYTSDTLYDMMRARALLSIYSNSPHQATSHLAQEGAEEPARRYLEALIRGRNGQTDSALQALDQLAAELPDYAMLPASAASIALEAQRYDEAITRSQRLLRIMPAYLPAQLTLAEAQLQRDPEAAYQLLNNITARHPDSPQGFNLLAEAAGRSGHGSWGHLARAEQLQLTGRVDQGIRQLSIARDAAERESNQQALARIEQRREAFIEYRQALEDF 486
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: A0A7C9JTA0_9GAMM (Putative beta-barrel assembly-enhancing protease n=2 Tax=Halomonas TaxID=2745 RepID=A0A7C9JTA0_9GAMM)

HSP 1 Score: 602 bits (1551), Expect = 6.200e-213
Identity = 317/390 (81.28%), Postives = 350/390 (89.74%), Query Frame = 1 
Query:    4 TVMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            TVMVD+ SLNAFAVPGGV+GINSGLFAFAEDEGAFVSV+AHELGHLSQRHYARG ARA QTQLPAMAAMLAGMLIA  G GD G+A AMGSQAA+IQD+L+YSR FE+EAD +GLQAMA AGYDP+AMVRMFA MQRMARLQG TPPEFLLTHPV+D+RLS AQARA+QL+VADTYTSD LYDMMRARAL+SIH N PQQAASRL QE +E+ AQRY+AAL+ AR GQ DSALQ LDQLA E PDY MLPTSAAT+AL+A RY     RSQR+LR+MPNYLPAQL LAEAQLQRDP+AA+ LLRDIT+++P+NPQGFNLLAEAAGRSG NGWGHLARAEHLQLTGR+D GIRQL IA++AAQ+END QALARIEQRRE FIEYREALEKF
Sbjct:   97 TVMVDNSSLNAFAVPGGVIGINSGLFAFAEDEGAFVSVIAHELGHLSQRHYARGIARAEQTQLPAMAAMLAGMLIAVGGAGDVGIATAMGSQAAMIQDRLSYSRRFEEEADRVGLQAMASAGYDPEAMVRMFAAMQRMARLQGGTPPEFLLTHPVSDSRLSDAQARASQLSVADTYTSDTLYDMMRARALISIHKNAPQQAASRLEQENSEEQAQRYVAALVEARTGQTDSALQALDQLARELPDYGMLPTSAATIALDAQRYDDAITRSQRVLRIMPNYLPAQLVLAEAQLQRDPRAAFELLRDITTQHPDNPQGFNLLAEAAGRSGFNGWGHLARAEHLQLTGRIDRGIRQLGIAKNAAQQENDQQALARIEQRREAFIEYREALEKF 486
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BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Match: UPI00201F1C02 (M48 family metalloprotease n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201F1C02)

HSP 1 Score: 602 bits (1551), Expect = 6.200e-213
Identity = 321/389 (82.52%), Postives = 351/389 (90.23%), Query Frame = 1 
Query:    7 VMVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYARGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTYSRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLTHPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAASRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTSAATVALEAGRYXXXXXRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNLLRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIRQLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF 1173
            VMVD+RSLNAFAVPGGVVGINSGLFAFA+DEGAFVSVLAHELGHLSQRHYAR +ARA QTQ+PAMAAMLAGMLIAASGGGDAG+A AMGSQAALIQDQLTYSR FEQEAD IGLQAMA AGYDP+AMVRMF+ MQRMARLQG  PPEFLLTHPV+D+RLS AQARA+QLNVAD YTS+ LYDMMRARALLSI+ N+PQQAASRLAQ+ AE+ AQRYL ALI A NGQ D ALQ +DQLA E PDY+MLPTSAA++AL+A RY     RSQRLLRL+PNYLPAQL LAEAQLQRDP AA+NLLRDITS++ ENPQGF+LLAEAAGRSGHNGWGHLARAEHLQLTGRVD GI+QLSIARDAA+ END Q +ARIEQRR+DF+EYR  LEKF
Sbjct:   98 VMVDNRSLNAFAVPGGVVGINSGLFAFADDEGAFVSVLAHELGHLSQRHYARRTARAEQTQIPAMAAMLAGMLIAASGGGDAGIATAMGSQAALIQDQLTYSRRFEQEADRIGLQAMANAGYDPEAMVRMFSAMQRMARLQGGNPPEFLLTHPVSDSRLSDAQARASQLNVADAYTSNTLYDMMRARALLSINRNSPQQAASRLAQDNAEESAQRYLDALIAAHNGQTDQALQTIDQLAQELPDYSMLPTSAASIALDAQRYDDAIARSQRLLRLVPNYLPAQLVLAEAQLQRDPAAAFNLLRDITSQHTENPQGFSLLAEAAGRSGHNGWGHLARAEHLQLTGRVDRGIQQLSIARDAARHENDQQLIARIEQRRDDFLEYRATLEKF 486
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13563.2127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F9UTS9_9ZZZZ1.150e-24392.84Peptidase_M48 domain-containing protein n=1 Tax=ma... [more]
A0A6I7N1N3_HALSX5.690e-22387.21Putative beta-barrel assembly-enhancing protease n... [more]
A0A060AZZ5_9GAMM7.660e-22185.13Putative beta-barrel assembly-enhancing protease n... [more]
UPI001CC383A14.860e-21783.12M48 family metalloprotease n=1 Tax=Halomonas aquam... [more]
A0A0D7UZH0_9GAMM1.970e-21684.10Putative beta-barrel assembly-enhancing protease n... [more]
A0A2T0V9M0_9GAMM4.610e-21583.08Putative beta-barrel assembly-enhancing protease n... [more]
H0J6F4_9GAMM2.650e-21483.80Putative beta-barrel assembly-enhancing protease n... [more]
UPI0017889FA13.770e-21482.56M48 family metalloprotease n=3 Tax=Halomonas TaxID... [more]
A0A7C9JTA0_9GAMM6.200e-21381.28Putative beta-barrel assembly-enhancing protease n... [more]
UPI00201F1C026.200e-21382.52M48 family metalloprotease n=1 Tax=Halomonas oliva... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13563contigE-siliculosus-1a_F_contig13563:101..1276 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1167
Model size1176
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.S
EggNOG OGs1MVFV@1224,1RP5S@1236,1XIIJ@135619,COG4783@1,COG4783@2
EggNOG free text desc.Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state
GOsGO:0003674,GO:0003756,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0022607,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043163,GO:0043165,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044464,GO:0045229,GO:0046872,GO:0051603,GO:0061024,GO:0061077,GO:0070011,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564,GO:1901565,GO:1901575
Preferred namebepA
Seed eggNOG ortholog1380358.JADJ01000026_gene1763
Seed ortholog evalue1.8e-180
Seed ortholog score638.6
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927871.00758-CDS-E-siliculosus-1a_F_contig13563:100..12671622927871.00758-CDS-E-siliculosus-1a_F_contig13563:100..1267Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13563 101..1267 -
1696318717.1752682-CDS-E-siliculosus-1a_F_contig13563:100..12671696318717.1752682-CDS-E-siliculosus-1a_F_contig13563:100..1267Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13563 101..1267 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927871.0177057-UTR-E-siliculosus-1a_F_contig13563:1267..12761622927871.0177057-UTR-E-siliculosus-1a_F_contig13563:1267..1276Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig13563 1268..1276 -
1696318717.1846066-UTR-E-siliculosus-1a_F_contig13563:1267..12761696318717.1846066-UTR-E-siliculosus-1a_F_contig13563:1267..1276Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig13563 1268..1276 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13563.2127.1prot_E-siliculosus-1a_F_contig13563.2127.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig13563 101..1267 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig13563.2127.1

>prot_E-siliculosus-1a_F_contig13563.2127.1 ID=prot_E-siliculosus-1a_F_contig13563.2127.1|Name=mRNA_E-siliculosus-1a_F_contig13563.2127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=389bp
MVDSRSLNAFAVPGGVVGINSGLFAFAEDEGAFVSVLAHELGHLSQRHYA
RGSARAAQTQLPAMAAMLAGMLIAASGGGDAGMAAAMGSQAALIQDQLTY
SRLFEQEADSIGLQAMAEAGYDPQAMVRMFATMQRMARLQGNTPPEFLLT
HPVTDNRLSAAQARAAQLNVADTYTSDILYDMMRARALLSIHSNTPQQAA
SRLAQEGAEDVAQRYLAALINARNGQIDSALQDLDQLASEQPDYAMLPTS
AATVALEAGRYDDAIQRSQRLLRLMPNYLPAQLSLAEAQLQRDPQAAYNL
LRDITSRNPENPQGFNLLAEAAGRSGHNGWGHLARAEHLQLTGRVDSGIR
QLSIARDAAQRENDTQALARIEQRREDFIEYREALEKF*
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mRNA from alignment at E-siliculosus-1a_F_contig13563:101..1276-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig13563.2127.1 ID=mRNA_E-siliculosus-1a_F_contig13563.2127.1|Name=mRNA_E-siliculosus-1a_F_contig13563.2127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1176bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13563:101..1276- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTTACCGTCATGGTGGATAGCCGGTCACTCAATGCCTTTGCGGTTCCCGG
TGGCGTAGTGGGCATTAACTCAGGACTCTTTGCATTTGCAGAAGATGAAG
GAGCCTTCGTATCGGTACTAGCCCACGAGCTTGGTCATCTTTCTCAGCGG
CATTACGCCCGAGGCAGCGCTCGTGCGGCGCAAACTCAGTTACCTGCTAT
GGCGGCAATGCTGGCAGGCATGCTGATTGCAGCCAGCGGCGGTGGCGACG
CAGGCATGGCAGCCGCCATGGGCTCACAGGCGGCGTTAATTCAAGATCAA
CTCACCTATTCACGGCTATTTGAGCAAGAAGCCGACAGCATCGGCTTGCA
AGCCATGGCCGAGGCAGGCTATGACCCCCAAGCAATGGTACGCATGTTCG
CGACAATGCAGCGCATGGCGCGCTTACAGGGCAATACTCCTCCTGAGTTT
TTACTTACTCACCCTGTCACCGACAATCGCTTAAGCGCTGCTCAAGCACG
CGCGGCCCAACTCAATGTAGCTGACACTTATACTAGCGATATCCTTTACG
ACATGATGCGCGCACGCGCCTTGCTGAGCATTCATTCCAACACTCCCCAG
CAGGCAGCTTCGCGCCTCGCCCAGGAAGGCGCTGAAGACGTCGCCCAGCG
CTATTTAGCAGCATTGATTAATGCTCGTAACGGCCAGATCGATAGCGCCT
TACAGGACCTAGATCAGCTAGCCAGTGAACAGCCCGACTATGCAATGCTG
CCTACTTCGGCGGCGACTGTCGCGCTTGAAGCAGGCCGCTACGATGATGC
TATCCAGCGCAGCCAACGACTATTGCGCTTGATGCCTAATTATTTACCTG
CTCAGTTGTCCTTAGCTGAAGCGCAACTCCAGCGTGACCCTCAGGCTGCT
TACAACCTGTTGCGCGATATCACGTCACGGAATCCTGAAAATCCGCAGGG
ATTCAATCTGCTTGCAGAGGCTGCGGGGCGCAGCGGGCATAATGGCTGGG
GCCATCTAGCGCGTGCCGAACACCTACAACTGACCGGGCGGGTAGATAGC
GGTATTCGCCAGCTCTCAATCGCACGAGATGCCGCGCAGCGGGAAAATGA
TACCCAGGCATTAGCGCGTATTGAACAACGTCGAGAGGACTTTATTGAAT
ATCGTGAAGCACTAGAAAAATTCTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13563:101..1276-

>mRNA_E-siliculosus-1a_F_contig13563.2127.1 ID=mRNA_E-siliculosus-1a_F_contig13563.2127.1|Name=mRNA_E-siliculosus-1a_F_contig13563.2127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2334bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13563:101..1276- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTGGATAGCCGGTCACTCAATGCCTTTGCGGTTCCCGGTGGCGTAGT
GGGCATTAACTCAGGACTCTTTGCATTTGCAGAAGATGAAGGAGCCTTCG
TATCGGTACTAGCCCACGAGCTTGGTCATCTTTCTCAGCGGCATTACGCC
CGAGGCAGCGCTCGTGCGGCGCAAACTCAGTTACCTGCTATGGCGGCAAT
GCTGGCAGGCATGCTGATTGCAGCCAGCGGCGGTGGCGACGCAGGCATGG
CAGCCGCCATGGGCTCACAGGCGGCGTTAATTCAAGATCAACTCACCTAT
TCACGGCTATTTGAGCAAGAAGCCGACAGCATCGGCTTGCAAGCCATGGC
CGAGGCAGGCTATGACCCCCAAGCAATGGTACGCATGTTCGCGACAATGC
AGCGCATGGCGCGCTTACAGGGCAATACTCCTCCTGAGTTTTTACTTACT
CACCCTGTCACCGACAATCGCTTAAGCGCTGCTCAAGCACGCGCGGCCCA
ACTCAATGTAGCTGACACTTATACTAGCGATATCCTTTACGACATGATGC
GCGCACGCGCCTTGCTGAGCATTCATTCCAACACTCCCCAGCAGGCAGCT
TCGCGCCTCGCCCAGGAAGGCGCTGAAGACGTCGCCCAGCGCTATTTAGC
AGCATTGATTAATGCTCGTAACGGCCAGATCGATAGCGCCTTACAGGACC
TAGATCAGCTAGCCAGTGAACAGCCCGACTATGCAATGCTGCCTACTTCG
GCGGCGACTGTCGCGCTTGAAGCAGGCCGCTACGATGATGCTATCCAGCG
CAGCCAACGACTATTGCGCTTGATGCCTAATTATTTACCTGCTCAGTTGT
CCTTAGCTGAAGCGCAACTCCAGCGTGACCCTCAGGCTGCTTACAACCTG
TTGCGCGATATCACGTCACGGAATCCTGAAAATCCGCAGGGATTCAATCT
GCTTGCAGAGGCTGCGGGGCGCAGCGGGCATAATGGCTGGGGCCATCTAG
CGCGTGCCGAACACCTACAACTGACCGGGCGGGTAGATAGCGGTATTCGC
CAGCTCTCAATCGCACGAGATGCCGCGCAGCGGGAAAATGATACCCAGGC
ATTAGCGCGTATTGAACAACGTCGAGAGGACTTTATTGAATATCGTGAAG
CACTAGAAAAATTCTAAATGGTGGATAGCCGGTCACTCAATGCCTTTGCG
GTTCCCGGTGGCGTAGTGGGCATTAACTCAGGACTCTTTGCATTTGCAGA
AGATGAAGGAGCCTTCGTATCGGTACTAGCCCACGAGCTTGGTCATCTTT
CTCAGCGGCATTACGCCCGAGGCAGCGCTCGTGCGGCGCAAACTCAGTTA
CCTGCTATGGCGGCAATGCTGGCAGGCATGCTGATTGCAGCCAGCGGCGG
TGGCGACGCAGGCATGGCAGCCGCCATGGGCTCACAGGCGGCGTTAATTC
AAGATCAACTCACCTATTCACGGCTATTTGAGCAAGAAGCCGACAGCATC
GGCTTGCAAGCCATGGCCGAGGCAGGCTATGACCCCCAAGCAATGGTACG
CATGTTCGCGACAATGCAGCGCATGGCGCGCTTACAGGGCAATACTCCTC
CTGAGTTTTTACTTACTCACCCTGTCACCGACAATCGCTTAAGCGCTGCT
CAAGCACGCGCGGCCCAACTCAATGTAGCTGACACTTATACTAGCGATAT
CCTTTACGACATGATGCGCGCACGCGCCTTGCTGAGCATTCATTCCAACA
CTCCCCAGCAGGCAGCTTCGCGCCTCGCCCAGGAAGGCGCTGAAGACGTC
GCCCAGCGCTATTTAGCAGCATTGATTAATGCTCGTAACGGCCAGATCGA
TAGCGCCTTACAGGACCTAGATCAGCTAGCCAGTGAACAGCCCGACTATG
CAATGCTGCCTACTTCGGCGGCGACTGTCGCGCTTGAAGCAGGCCGCTAC
GATGATGCTATCCAGCGCAGCCAACGACTATTGCGCTTGATGCCTAATTA
TTTACCTGCTCAGTTGTCCTTAGCTGAAGCGCAACTCCAGCGTGACCCTC
AGGCTGCTTACAACCTGTTGCGCGATATCACGTCACGGAATCCTGAAAAT
CCGCAGGGATTCAATCTGCTTGCAGAGGCTGCGGGGCGCAGCGGGCATAA
TGGCTGGGGCCATCTAGCGCGTGCCGAACACCTACAACTGACCGGGCGGG
TAGATAGCGGTATTCGCCAGCTCTCAATCGCACGAGATGCCGCGCAGCGG
GAAAATGATACCCAGGCATTAGCGCGTATTGAACAACGTCGAGAGGACTT
TATTGAATATCGTGAAGCACTAGAAAAATTCTAA
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