mRNA_E-siliculosus-1a_F_contig1356.2123.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1356.2123.1
Unique NamemRNA_E-siliculosus-1a_F_contig1356.2123.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: D7FXW8_ECTSI (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXW8_ECTSI)

HSP 1 Score: 617 bits (1592), Expect = 3.620e-221
Identity = 327/349 (93.70%), Postives = 329/349 (94.27%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAYSATNER 1047
            MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDK DTPAAAGCENAKAQ DDCDGSGGARG PLSTAVATDDGEFDAASAAGPEAKGAGV+AGSGVGATDESGDI PDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQ                GDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHA+SATNER
Sbjct:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKRDTPAAAGCENAKAQLDDCDGSGGARGAPLSTAVATDDGEFDAASAAGPEAKGAGVVAGSGVGATDESGDIGPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQ----------------GDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAHSATNER 333          
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: A0A835ZAQ0_9STRA (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ0_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.910e-93
Identity = 178/344 (51.74%), Postives = 204/344 (59.30%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAYS 1032
            MG+  KDKRD++YR AKE+G+RARSA+KLLQLDEEFG+F+GV++AVDLCAAPGSWSQVLA+ L                                         + E +AA+AA                                              Q G+           EEVRIVAVDLQ MAPI GVKQLQ                GDITS+ TAEAIID FRGG A+LVVCDGAPDVTGLHDIDEY+QAQLLLAALNIT HVL+ GG FVAKIFRG+D SLL+SQLRL F RV +AKP+SSR+SSIE+FVVC+ Y PP GF  SMLTPLLDH  S
Sbjct:    1 MGKASKDKRDIYYRLAKEMGYRARSAYKLLQLDEEFGIFKGVSRAVDLCAAPGSWSQVLAANLW-------------------------------------LKGEAEAEAATAA---------------------------------------------AQGGS-----------EEVRIVAVDLQEMAPIPGVKQLQ----------------GDITSLSTAEAIIDDFRGGRADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLADGGIFVAKIFRGKDVSLLHSQLRLFFRRVAVAKPKSSRNSSIESFVVCQGYQPPPGFSPSMLTPLLDHKAS 235          
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: A0A6P3WG56_CLUHA (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Clupeidae TaxID=55118 RepID=A0A6P3WG56_CLUHA)

HSP 1 Score: 282 bits (722), Expect = 4.650e-90
Identity = 166/343 (48.40%), Postives = 194/343 (56.56%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAY 1029
            MGR+ +DKRD++YR+AKE G+RARSAFKLLQLDEE+ LFEGVT+AVDLCAAPGSWSQVL+ KL                                                                                                         R K+ ++E+V+IVAVDLQ MAP+ GV Q+Q                GDIT + TAE II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL  GGTFVAKIFRG+D +LLYSQLR+ F RVT AKPRSSR+SSIEAFVVCR Y+PPEG+  +M  PLLDH+Y
Sbjct:    1 MGRSSRDKRDIYYRQAKEEGWRARSAFKLLQLDEEYNLFEGVTRAVDLCAAPGSWSQVLSRKL---------------------------------------------------------------------------------------------------------RAKEGKKEDVKIVAVDLQAMAPLPGVTQIQ----------------GDITKLSTAEEIIKHFEGQSADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKTGGTFVAKIFRGKDVTLLYSQLRIFFSRVTCAKPRSSRNSSIEAFVVCRNYSPPEGYVPNMSNPLLDHSY 222          
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: A0A3Q2T1E0_FUNHE (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=6 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3Q2T1E0_FUNHE)

HSP 1 Score: 279 bits (713), Expect = 5.610e-89
Identity = 169/343 (49.27%), Postives = 193/343 (56.27%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAY 1029
            MGR+ KDKRD++YR AKE G+RARSAFKLLQLD EF LF GV +AVDLCAAPGSWSQVL+ KL G                                                                         R + GE                + G G          EEV+IVAVDLQ MAP+ GV Q+Q                GDIT V TA+ II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+D +LLYSQLR+ F  VT AKPRSSR+SSIEAFVVC+ Y+PPEG+  +M  PLLDH+Y
Sbjct:    1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDNEFNLFSGVNRAVDLCAAPGSWSQVLSRKLRG-------------------------------------------------------------------------REERGE----------------KAGGG----------EEVKIVAVDLQAMAPLPGVTQIQ----------------GDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLRIFFSSVTCAKPRSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHSY 228          
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: A0A8J1UVB4_OWEFU (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UVB4_OWEFU)

HSP 1 Score: 281 bits (719), Expect = 1.720e-88
Identity = 174/343 (50.73%), Postives = 208/343 (60.64%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAY 1029
            MGR+ KDKRD++YR AKE G+RARSA+KLLQ++EEF +FEGV K VDLCAAPGSWSQVLA KL  DK            +++ D            LS            ASA     +G          +  E+    P+G +       +      +   GA  E     +  E+ +IVAVDLQ MAPI GV Q+Q                GDIT + TA  II HF G  A+LVVCDGAPDVTGLHDIDEY+QAQLLLAALNIT HVL  GGTFVAKIFRG+D +LLYSQL++ F  VT AKPRSSR+SSIEAFVVC+ Y+PPEG+  +M  PLLDH Y
Sbjct:    1 MGRSSKDKRDIYYRLAKEEGWRARSAYKLLQINEEFNIFEGVNKVVDLCAAPGSWSQVLARKLKADK---------SKVQSKED------------LSVXXXXXXXXNTTASAYNDPPRGQNN-------SNPETVIENPEGHKEKLVSKIQQSNTNMEITDGASKEAGKCPSVSEDSKIVAVDLQAMAPIPGVIQIQ----------------GDITKLSTAHKIIGHFEGDKADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKKGGTFVAKIFRGKDVTLLYSQLKIFFPLVTCAKPRSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHHY 299          
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: A0A3P8Y5R2_ESOLU (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=3 Tax=Esox lucius TaxID=8010 RepID=A0A3P8Y5R2_ESOLU)

HSP 1 Score: 278 bits (710), Expect = 2.410e-88
Identity = 165/343 (48.10%), Postives = 194/343 (56.56%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAY 1029
            MGR+ KDKRD++YR AKE G+RARSAFKLLQLDEEFGLF+GV +AVDLCAAPGSWSQVL+ KL G                                                                                                     + ++K+  EE V+IVAVDLQ MAP+ GV Q+Q                GDIT + TA+ II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+D +LLYSQL++ F  VT AKPRSSR+SSIEAFVVC+ Y+PPEG+  +M  PLLDH+Y
Sbjct:    1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFGLFKGVKRAVDLCAAPGSWSQVLSRKLRG----------------------------------------------------------------------------------------------------KDVKIKEMAEE-VKIVAVDLQAMAPLPGVTQIQ----------------GDITKISTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKIFFSGVTCAKPRSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHSY 226          
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: UPI0011CFF1C0 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X2 n=3 Tax=Tetrapoda TaxID=32523 RepID=UPI0011CFF1C0)

HSP 1 Score: 276 bits (707), Expect = 3.600e-88
Identity = 169/343 (49.27%), Postives = 188/343 (54.81%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAY 1029
            MGR+ KDKRD++YR AKE G+RARSAFKLLQLDEEF LFEGV +AVDLCAAPGSWSQVL+ KL G                        G   GP                                                                                E V+IVAVDLQ MAP+ GV Q+Q                GDIT V TA+ II HF G  A+LVVCDGAPDVTGLHDIDEY+QAQLLLAALNIT HVL+ GGTFVAKIFRG+D +LLYSQLR+ F  VT AKPRSSR+SSIEAFVVCR Y PPEG+  +M  PLLDH Y
Sbjct:    1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFQLFEGVRRAVDLCAAPGSWSQVLSRKLKG------------------------GAGEGP--------------------------------------------------------------------------------ESVKIVAVDLQAMAPLPGVVQIQ----------------GDITKVSTAQEIIQHFEGQPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLNKGGTFVAKIFRGKDVTLLYSQLRIFFPDVTCAKPRSSRNSSIEAFVVCRGYCPPEGYVPNMSNPLLDHCY 223          
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: A0A498N2I9_LABRO (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Neopterygii TaxID=41665 RepID=A0A498N2I9_LABRO)

HSP 1 Score: 275 bits (702), Expect = 5.220e-88
Identity = 164/343 (47.81%), Postives = 191/343 (55.69%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAY 1029
            MGR+ KDKRD++YR AKE G+RARSAFKLLQLDEEF LF+GV++AVDLCAAPGSWSQVL+ KL G                                                                   D+S                                        EEV+IVAVDLQ MAP+ GV Q+Q                GDIT + TA+ II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL PGG FVAKIFRG+D +LLYSQL++ F  VT AKPRSSR+SSIEAFVVC+ Y+PPEG+  +M  PLLDH+Y
Sbjct:    1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFNLFKGVSRAVDLCAAPGSWSQVLSRKLRGK------------------------------------------------------------------DKS----------------------------------------EEVKIVAVDLQAMAPLPGVTQIQ----------------GDITKISTAQEIIRHFEGQSADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGNFVAKIFRGKDVTLLYSQLKIFFSSVTCAKPRSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHSY 221          
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: UPI00155FA59A (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI00155FA59A)

HSP 1 Score: 273 bits (699), Expect = 6.050e-88
Identity = 165/343 (48.10%), Postives = 189/343 (55.10%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAY 1029
            MGR+ KDKRD++YR AKE G+RARSAFKLLQLDEEF LF+GV +AVDLCAAPGSWSQVL+ KL GD+                                                                                               G G+E          V+IVAVDLQ MAP+  V Q+Q                GDIT V TA+ II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+D +LLYSQL++ F  VT AKPRSSR+SSIEAFVVC+ Y PPEG+  +M  PLLDH Y
Sbjct:    1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFRLFKGVCRAVDLCAAPGSWSQVLSRKLKGDE-----------------------------------------------------------------------------------------------GKGTE----------VKIVAVDLQAMAPLPAVTQIQ----------------GDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKIFFSGVTCAKPRSSRNSSIEAFVVCQGYTPPEGYVPNMSNPLLDHCY 222          
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Match: A0A3Q2Y4X4_HIPCM (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=31 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A3Q2Y4X4_HIPCM)

HSP 1 Score: 276 bits (705), Expect = 7.460e-88
Identity = 166/343 (48.40%), Postives = 190/343 (55.39%), Query Frame = 1
Query:    1 MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTAVATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRHHRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCRFTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAY 1029
            MGR+ KDKRD++YR AKE G+RARSAFKLLQLDEEF LF GV +AVDLCAAPGSWSQVL+ KL G                  + C+G                                                                                       EEV+IVAVDLQ MAP+ GV Q+Q                GDIT V TAE I+ HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+D +LLYSQL++ F  VT AKPRSSR+SSIEAFVVC+ Y PPEG+  +M  PLLDH+Y
Sbjct:    1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEFSLFTGVNRAVDLCAAPGSWSQVLSRKLRG----------------HGEKCEGG--------------------------------------------------------------------------------------EEVKIVAVDLQAMAPLPGVTQIQ----------------GDITKVSTAEEIVRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKIFFGGVTCAKPRSSRNSSIEAFVVCQNYHPPEGYVPNMSNPLLDHSY 225          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1356.2123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW8_ECTSI3.620e-22193.70Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A835ZAQ0_9STRA1.910e-9351.74Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A6P3WG56_CLUHA4.650e-9048.40Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A3Q2T1E0_FUNHE5.610e-8949.27Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A8J1UVB4_OWEFU1.720e-8850.73Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A3P8Y5R2_ESOLU2.410e-8848.10Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
UPI0011CFF1C03.600e-8849.27putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A498N2I9_LABRO5.220e-8847.81Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
UPI00155FA59A6.050e-8848.10putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A3Q2Y4X4_HIPCM7.460e-8848.40Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1356contigE-siliculosus-1a_F_contig1356:927..3409 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1050
Model size1050
Exons5
Ec32 orthologEc-16_005130.1
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko03009,ko03016
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EC2.1.1.166,2.1.1.205
EggNOG OGsCOG0293@1,KOG1099@2759
EggNOG free text desc.tRNA methyltransferase activity
KEGG koko:K02427,ko:K14820,ko:K14864
Seed eggNOG ortholog2880.D7FXW8
Seed ortholog evalue5.5e-176
Seed ortholog score623.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1356.2123.1prot_E-siliculosus-1a_F_contig1356.2123.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1356 927..3409 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927870.1226425-CDS-E-siliculosus-1a_F_contig1356:926..11991622927870.1226425-CDS-E-siliculosus-1a_F_contig1356:926..1199Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 927..1199 -
1696318716.786787-CDS-E-siliculosus-1a_F_contig1356:926..11991696318716.786787-CDS-E-siliculosus-1a_F_contig1356:926..1199Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 927..1199 -
1622927870.1388834-CDS-E-siliculosus-1a_F_contig1356:1464..16471622927870.1388834-CDS-E-siliculosus-1a_F_contig1356:1464..1647Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 1465..1647 -
1696318716.7994592-CDS-E-siliculosus-1a_F_contig1356:1464..16471696318716.7994592-CDS-E-siliculosus-1a_F_contig1356:1464..1647Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 1465..1647 -
1622927870.1580646-CDS-E-siliculosus-1a_F_contig1356:2110..25331622927870.1580646-CDS-E-siliculosus-1a_F_contig1356:2110..2533Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 2111..2533 -
1696318716.8065295-CDS-E-siliculosus-1a_F_contig1356:2110..25331696318716.8065295-CDS-E-siliculosus-1a_F_contig1356:2110..2533Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 2111..2533 -
1622927870.1748452-CDS-E-siliculosus-1a_F_contig1356:3042..31591622927870.1748452-CDS-E-siliculosus-1a_F_contig1356:3042..3159Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 3043..3159 -
1696318716.8136802-CDS-E-siliculosus-1a_F_contig1356:3042..31591696318716.8136802-CDS-E-siliculosus-1a_F_contig1356:3042..3159Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 3043..3159 -
1622927870.1949282-CDS-E-siliculosus-1a_F_contig1356:3355..34091622927870.1949282-CDS-E-siliculosus-1a_F_contig1356:3355..3409Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 3356..3409 -
1696318716.8217547-CDS-E-siliculosus-1a_F_contig1356:3355..34091696318716.8217547-CDS-E-siliculosus-1a_F_contig1356:3355..3409Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1356 3356..3409 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1356.2123.1

>prot_E-siliculosus-1a_F_contig1356.2123.1 ID=prot_E-siliculosus-1a_F_contig1356.2123.1|Name=mRNA_E-siliculosus-1a_F_contig1356.2123.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=350bp
MGRNGKDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCA
APGSWSQVLASKLLGDKHDTPAAAGCENAKAQHDDCDGSGGARGPPLSTA
VATDDGEFDAASAAGPEAKGAGVIAGSGVGATDESGDIRPDGGEAGPRRH
HRAGVDCADTQTGAGSEGRVKDTEEEEVRIVAVDLQGMAPIEGVKQLQCR
FTATCSAALLIAPQGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLH
DIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFE
RVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAYSATNER*
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mRNA from alignment at E-siliculosus-1a_F_contig1356:927..3409-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1356.2123.1 ID=mRNA_E-siliculosus-1a_F_contig1356.2123.1|Name=mRNA_E-siliculosus-1a_F_contig1356.2123.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2483bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1356:927..3409- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGGCGCAACGGCAAGGATAAGCGGGACATGTTCTACAGGAAGGCCAA GGAGGTAAAGCAGTACTGTAACATCTGCACTCGAATGCTATCCATTGGGC GCTGTAGCAGTTTGTAGATCATTTGAAGCTGATTTGCCCAGCAGTGCGAT GCTTCGGTTTGTCTACTGCTACTGGTGCTCCCTTTGTTGCTGTCCTAGGA TCAGACACTTACGGCGTGCTCTTGGCTGGCACATGCGTCGTCTCTTGCAG GTCGGCTTCCGAGCACGTAGCGCGTTCAAGTTGTTGCAGCTTGACGAGGA GTTTGGGCTATTCGAAGGAGTCACCAAGGCCGTCGATCTATGCGCGGCCC CTGGGAGCTGGAGTCAAGTGAGACAGACGCACAAGGCACTGCTGCAGCAT GCCCAGTCCCGCGGATGCAGGACAAGGGATTCACTTTCTTTGCTGGATGC CAATCTTGTGCTGCTGCGCCCCCACGGCATGCTGTGCAGCGGTGCCACCT GGATTATCTTGCATCCCATCCCATTAGATGCAGCGATGTTTGTACTGGGT CATGTGTGTCCCTACTTTGCTATCCTTTGCGGGTGACGTACCAGAACCAC CACAGGACGATTATACTTATAGAAGTACCTTGCTGGTGGTGGTCGAAAGC TGACCTGACCGCCAAGGACGTCTGCGCACCTTGCTGCCCGATGGCAGCAT GTATATACAGCACCGTGTTGTTGGCACTGTCATCCTCCCGTTCGCCAGCA TCACGGCGTCGGGACATGAACGTCACACACATCGACAGAGAACAACAGCG AAAGCACGATTCCTTCCGCTCAACCCCACCATGCTGCATGATGTCACTGC CCCCCCCCAACCCAACCACGAAACAGGTGCTCGCCAGCAAGCTCTTGGGA GACAAACATGACACACCCGCTGCTGCTGGCTGCGAGAACGCCAAGGCTCA ACACGATGATTGTGACGGCAGCGGGGGCGCAAGAGGGCCGCCTCTCTCCA CTGCCGTGGCAACGGACGACGGCGAATTCGATGCAGCTTCCGCGGCAGGG CCAGAGGCCAAAGGCGCCGGGGTTATCGCAGGCAGCGGTGTTGGCGCCAC TGATGAGAGCGGTGACATTCGCCCGGATGGGGGGGAAGCGGGGCCGAGAC GACATCACCGAGCAGGGGTAGATTGCGCGGACACGCAGACAGGGGCAGGG AGCGAGGGAAGAGTAAAGGACACAGAGGAAGAGGAGGTTCGAATTGTGGC GGTGGATTTGCAGGGGATGGCACCCATCGAGGGAGTCAAGCAGCTCCAGG TGGGTCGTGAGCCAGCAGGACAGCGACAGGTCATACTTGTGGTACCGCGT AAAGGGGGGGGGGTAACTGTTGTTGTTGCAGTTGGTCTGCGGGCGTGTTA TAGTTGCTGCGGACATGCCGATCTTATTTGCGTTACGCACTGTTTTCAGA GACTCTGAACGCACTGAGCGGTAGATTCTTCAGATTGTTTGTGTTCTCGG CTTGGTAGACGCCGGACGAGACGGCTGCTCTGCTAATGTGTAGCAGGAGT AGCGTAACGTTGAGCCTCGCAAGTTTCCCGCAATGTCTGAGCGAAGCGGC ACCCATCTCATTGGCCCAAAAAGGGGGTGTCCATTTATTTTGAGACGGTT TCAAGTCCTACAGACGTCGACACTTCACGTAGGTGGTGGTACTCTTTTTT CCTTTATTTGTTTTTCGGTTTTCAGAACACGGAAAAAAGTCGTACGGTAT CAACTACTGCAGTGCCGCTTCACCGCAACATGTTCCGCCGCGTTGCTCAT TGCGCCGCAGGGTGACATCACCTCTGTAAAAACTGCGGAGGCGATCATAG ACCACTTCCGAGGAGGACTGGCCGAGCTGGTGGTGTGTGACGGCGCGCCG GACGTGACGGGCCTTCACGACATCGACGAGTATCTACAAGCGCAGGTAAA TCTTGGCCTCGTTGTTGTTGGTGTCATCAGTGAGGGGGTCGTTGTTGGAC GTACAATTATCTCAAGTTTTTGTCTGCAACCCTGGTGCTCCTCCCCCCGA TCCCTCGAATGCTGATCCTCCCTTGAAAGTCACCTGTGATACCGTAAGAA CATTGTGGATCACCAAGTGATAAAACGATCGATCAACATCAATCCAAGCT AATCTTCGCCCCCACCCCCCGGTCGTCCTATCCATCACACGTCTTGCCCC CGTCGAAAAGCTCCTTCTAGCGGCCCTCAACATCACGGCTCACGTCTTGT CGCCTGGGGGTACCTTCGTGGCCAAGATCTTCAGGGGGCGAGACTCGAGC CTGCTCTACAGCCAGCTGCGCCTGCTGTTCGAGCGGGTGACTATCGCCAA GCCACGCAGCAGCCGCAGCAGCTCCATCGAGGCGTTCGTCGTGTGCCGCG TGTACGCCCCGCCTGAGGGCTTCGAGGCATCCATGCTCACGCCGTTGTTA GACCACGCTTATTCGGCCACCAACGAGCGGTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1356:927..3409-

>mRNA_E-siliculosus-1a_F_contig1356.2123.1 ID=mRNA_E-siliculosus-1a_F_contig1356.2123.1|Name=mRNA_E-siliculosus-1a_F_contig1356.2123.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2100bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1356:927..3409- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGGCGCAACGGCAAGGATAAGCGGGACATGTTCTACAGGAAGGCCAA
GGAGATGGGGCGCAACGGCAAGGATAAGCGGGACATGTTCTACAGGAAGG
CCAAGGAGGTCGGCTTCCGAGCACGTAGCGCGTTCAAGTTGTTGCAGCTT
GACGAGGAGTTTGGGCTATTCGAAGGAGTCACCAAGGCCGTCGATCTATG
CGCGGCCCCTGGGAGCTGGAGTCAAGTCGGCTTCCGAGCACGTAGCGCGT
TCAAGTTGTTGCAGCTTGACGAGGAGTTTGGGCTATTCGAAGGAGTCACC
AAGGCCGTCGATCTATGCGCGGCCCCTGGGAGCTGGAGTCAAGTGCTCGC
CAGCAAGCTCTTGGGAGACAAACATGACACACCCGCTGCTGCTGGCTGCG
AGAACGCCAAGGCTCAACACGATGATTGTGACGGCAGCGGGGGCGCAAGA
GGGCCGCCTCTCTCCACTGCCGTGGCAACGGACGACGGCGAATTCGATGC
AGCTTCCGCGGCAGGGCCAGAGGCCAAAGGCGCCGGGGTTATCGCAGGCA
GCGGTGTTGGCGCCACTGATGAGAGCGGTGACATTCGCCCGGATGGGGGG
GAAGCGGGGCCGAGACGACATCACCGAGCAGGGGTAGATTGCGCGGACAC
GCAGACAGGGGCAGGGAGCGAGGGAAGAGTAAAGGACACAGAGGAAGAGG
AGGTTCGAATTGTGGCGGTGGATTTGCAGGGGATGGCACCCATCGAGGGA
GTCAAGCAGCTCCAGGTGCTCGCCAGCAAGCTCTTGGGAGACAAACATGA
CACACCCGCTGCTGCTGGCTGCGAGAACGCCAAGGCTCAACACGATGATT
GTGACGGCAGCGGGGGCGCAAGAGGGCCGCCTCTCTCCACTGCCGTGGCA
ACGGACGACGGCGAATTCGATGCAGCTTCCGCGGCAGGGCCAGAGGCCAA
AGGCGCCGGGGTTATCGCAGGCAGCGGTGTTGGCGCCACTGATGAGAGCG
GTGACATTCGCCCGGATGGGGGGGAAGCGGGGCCGAGACGACATCACCGA
GCAGGGGTAGATTGCGCGGACACGCAGACAGGGGCAGGGAGCGAGGGAAG
AGTAAAGGACACAGAGGAAGAGGAGGTTCGAATTGTGGCGGTGGATTTGC
AGGGGATGGCACCCATCGAGGGAGTCAAGCAGCTCCAGTGCCGCTTCACC
GCAACATGTTCCGCCGCGTTGCTCATTGCGCCGCAGGGTGACATCACCTC
TGTAAAAACTGCGGAGGCGATCATAGACCACTTCCGAGGAGGACTGGCCG
AGCTGGTGGTGTGTGACGGCGCGCCGGACGTGACGGGCCTTCACGACATC
GACGAGTATCTACAAGCGCAGTGCCGCTTCACCGCAACATGTTCCGCCGC
GTTGCTCATTGCGCCGCAGGGTGACATCACCTCTGTAAAAACTGCGGAGG
CGATCATAGACCACTTCCGAGGAGGACTGGCCGAGCTGGTGGTGTGTGAC
GGCGCGCCGGACGTGACGGGCCTTCACGACATCGACGAGTATCTACAAGC
GCAGCTCCTTCTAGCGGCCCTCAACATCACGGCTCACGTCTTGTCGCCTG
GGGGTACCTTCGTGGCCAAGATCTTCAGGGGGCGAGACTCGAGCCTGCTC
TACAGCCAGCTGCGCCTGCTGTTCGAGCGGGTGACTATCGCCAAGCCACG
CAGCAGCCGCAGCAGCTCCATCGAGGCGTTCGTCGTGTGCCGCGTGTACG
CCCCGCCTGAGGGCTTCGAGGCATCCATGCTCACGCCGTTGTTAGACCAC
GCTTATTCGGCCACCAACGAGCGGTGACTCCTTCTAGCGGCCCTCAACAT
CACGGCTCACGTCTTGTCGCCTGGGGGTACCTTCGTGGCCAAGATCTTCA
GGGGGCGAGACTCGAGCCTGCTCTACAGCCAGCTGCGCCTGCTGTTCGAG
CGGGTGACTATCGCCAAGCCACGCAGCAGCCGCAGCAGCTCCATCGAGGC
GTTCGTCGTGTGCCGCGTGTACGCCCCGCCTGAGGGCTTCGAGGCATCCA
TGCTCACGCCGTTGTTAGACCACGCTTATTCGGCCACCAACGAGCGGTGA
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