mRNA_E-siliculosus-1a_F_contig1348.2074.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1348.2074.1
Unique NamemRNA_E-siliculosus-1a_F_contig1348.2074.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: D7FT73_ECTSI (Similar to spermatogenesis associated factor SPAF n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT73_ECTSI)

HSP 1 Score: 1960 bits (5078), Expect = 0.000e+0
Identity = 1060/1137 (93.23%), Postives = 1075/1137 (94.55%), Query Frame = 1
Query:    1 MGKGRRGSGVTLANSPHRLEQHEAEGGWRGRVRMLSSSTLGAAATKEDGGRIVALTEEDFRKSGFRSRELVAVLAGPSRLIAGRICSLPSAALRPGGVGLSSASAQSLLGCDIEDAAGAGGEGARVRVRRLSDTSATIVTASSLDLILEAGVGLPGGRSGGGGGPVAQQGSLSTTSSPRVYLERLAAGRMALLQRAAGYCAYGTHARGGDVLSVSFEGVPHLFRVATLEPPIPSRQHTAAVATAAAKVKASEADDVTGDSLVAPLAALSVSEPRVAESTPGKPATVAPPXXXVAAPADHGQDGTAAGVPAATTDSANGSSAEPRREDSATAVARVRLEAFYREHNPDKLVVGGIDGILDKYAGREETLFAKLEKKYGAGSSLLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHSVAMPGTPARSGSFSTGSGQQSSPANVLGRRIAGGPHPPGTPSALRQRVENRDGSGGRGGDEPTGIRSWGAGETLWFVAADTAIRLSAADARSPEGDDGGTRLQTSADPSGTKRALGGGECSQQRGAGGGTPRDGDWGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQ-----------VVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEESTSAEGLPTLTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQGGVR 3378
            MGKGRRGSGVTLA+SPHRLEQHEAEGGWRGR+R+LSSSTLGAAATKEDGGRIVALTEEDFRKSGFRSRELVAVLAGPSRLI+GRIC LPSAALRPGGVGLSSASAQSLLGCD EDAAGAGGEGARVRVRRLSDTSATIVTASSLDL+LEAGVGLPGGRSGGGG PVAQQGSLSTTS PRVYL+RLAAGRMALLQRAAGYCAYGTHAR GD+LSVSFEGVPHLFRVATLEPPIPSRQHTAAVATAAAKVKASEADDVTG SLVAPLAALSVSEPRVAESTPGK ATVAPP   VAAPADHGQ GTA GVPA  TDSANGSSAEPRREDS TAVARVRLEAFYREHNPDKLV G IDGIL+KYAGREETLFAKLEKKYGAGSSLLRT        XXXXXXXXXX            A SV MPGTPA SGSFSTGSGQQSSPANVLGRRIAGGPHP GTPSALRQR ENRDGSGGR GDEPTGIRSWGAGETLWFVAADT+IRLSAAD RSPE DDGGTRLQT+ADPSGTKRALGGG CSQQRGAGGGTPRDGDWGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLL+GPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQ           VVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPH MADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGG+WGS+SARAGCSDAGVEE ESTSAEGLPTLTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRAR AAPTIIFFDEVDALAC+RGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPD LSRREILRLSLAKVPCAGDV+HEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQ GVR
Sbjct:    1 MGKGRRGSGVTLASSPHRLEQHEAEGGWRGRIRVLSSSTLGAAATKEDGGRIVALTEEDFRKSGFRSRELVAVLAGPSRLISGRICCLPSAALRPGGVGLSSASAQSLLGCDTEDAAGAGGEGARVRVRRLSDTSATIVTASSLDLVLEAGVGLPGGRSGGGGRPVAQQGSLSTTS-PRVYLQRLAAGRMALLQRAAGYCAYGTHAREGDMLSVSFEGVPHLFRVATLEPPIPSRQHTAAVATAAAKVKASEADDVTGASLVAPLAALSVSEPRVAESTPGKTATVAPPPPPVAAPADHGQVGTATGVPAVLTDSANGSSAEPRREDSPTAVARVRLEAFYREHNPDKLVGGDIDGILEKYAGREETLFAKLEKKYGAGSSLLRTTTAGGNTGXXXXXXXXXX------------AQSVTMPGTPAGSGSFSTGSGQQSSPANVLGRRIAGGPHPSGTPSALRQRFENRDGSGGRRGDEPTGIRSWGAGETLWFVAADTSIRLSAADVRSPEDDDGGTRLQTTADPSGTKRALGGGGCSQQRGAGGGTPRDGDWGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLHGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQFVRCPSARRREVVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHTMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGNWGSISARAGCSDAGVEEGESTSAEGLPTLTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARAAAPTIIFFDEVDALACKRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDVLSRREILRLSLAKVPCAGDVEHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQRGVR 1124          
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: L8H211_ACACA (ATPase, AAA domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H211_ACACA)

HSP 1 Score: 600 bits (1547), Expect = 1.310e-193
Identity = 323/629 (51.35%), Postives = 424/629 (67.41%), Query Frame = 1
Query: 1480 FVAADTAIRLSAADARSPEGDDGGTRLQTSADPSGTKRALGGGECSQQRGAGGGTPRDGDWGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQVVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEESTSAEGLPTLTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQ 3366
            F  A  A    AADA +    DG     ++ D     R  GGGE + +   G  T  + D+GS+GGL  +I  +RE +EL + SP +  +YG+ PP+G+LLYGPPGTGKT +AR  A+  GC V V+NG E++S++ GESE  +R  F EA+  AP L+  DEID +  +R  A+SE + RVV+T+L +M G++A ++VVVI  TNRP ALDPALRRPGR D E+EIG+P A  R EIL+V LR +PHA++ A                     ++++ AA THGFVGADL  L +EA+L +L R         LSA+   S     EEE  S + L  +TA D  +AL +V PS LREV V+VP V+W DIGG +  KQ L+E VEWPL+HPEAF RMG+ PPRG+LLYGPPGCSKTLMA+ALATESG NF+AVKGPEL SKW+GESERA++ +F++AR AAP IIFFDE+DALA  RGGG E  +G  +RV++QLLTE++GI+ +K + VVAATNRPD+ID ALLRPGR+DR++YV PPDA SR  I ++ L K P A D+    LA  TEG+SGAE+  +CREA +CA+ ED +A  V+Q H + A+    P+ITP ++A Y  F+
Sbjct:  283 FKYASHAPPTKAADAEN----DGSDTSTSTTDTEEGARPEGGGEPAGKSKHG--TTAELDYGSIGGLKREIDAVREVVELAVNSPKLFTEYGLAPPKGILLYGPPGTGKTLIARVVAQQSGCRVYVINGPEVISKYYGESEAKIRNLFKEAADNAPALVFIDEIDAIAGKRADAASEMENRVVATLLTVMGGMEANDRVVVIGATNRPDALDPALRRPGRFDREIEIGIPTAEDRHEILKVTLRRMPHALSPA---------------------DIQQFAAATHGFVGADLAALCREASLLSLNR---------LSAQLFASAGAPGEEELLSLDTL-VITAEDMSSALKVVRPSTLREVLVDVPKVQWSDIGGQDDTKQKLKEAVEWPLKHPEAFKRMGIRPPRGILLYGPPGCSKTLMAKALATESGANFIAVKGPELFSKWVGESERAVREVFRKARAAAPCIIFFDEIDALAVHRGGGDEGSSGVADRVVSQLLTEMNGIEELKNVTVVAATNRPDMIDKALLRPGRIDRMLYVSPPDAPSRERIFQIFLNKTPHADDIALPKLAELTEGYSGAEIAGVCREACMCAMREDPTAQVVKQTHFVAAIANTSPRITPEMVAFYDQFR 874          
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: A0A4D9CZ55_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ55_9STRA)

HSP 1 Score: 596 bits (1537), Expect = 4.920e-193
Identity = 334/585 (57.09%), Postives = 407/585 (69.57%), Query Frame = 1
Query: 1660 WGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAA----KACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQVVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEESTSAEGLPTLTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPC---------AGDVDHEALARRTEGFSGAEVVALCREASICALEEDR-SATQVRQAHLLEALGQMRPQITPAVLASYASFQGG 3372
            W SVGGL + + +LR+ +E  L SP +    G+RP RG LL GP GTGKTTL RAAA    +  G HV+ V G E++ R VGE+E  LR+ F EA   AP ++V DE++ LCPRR+ AS +  RR+V+T+LAL+DG    ++VVV+A T+RPQALDPALRRPGRLD E+E+GVP  A R EIL VLL G       A +                    ++ +A+R HGFVGADL L+ KEAA+ A+RR       G  +A  G    G +            +T  D  AAL LV PS LREVAVEVP V+WGDIGGM+ VKQSLRE VEWPL  PEAF+RMG++PP+GVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESE+A+Q LFK+AR AAPT++FFDEVDALA RRG G +  A  +ERVL+QLLTELDG+QP++R+VVVAATNRPD++DPALLRPGR+DR VYVPPPD  SRREIL+++L  VP             +D E LARRTEGFSGAEVVAL REA++CA+EED   A  +R  H  +AL   + QITP +L  Y  + GG
Sbjct:  266 WASVGGLEAVVDELRQGVEQSLDSPHVFLDRGLRPARGFLLVGPSGTGKTTLLRAAAEYFGRGRGYHVMRVAGPEVVGRLVGETESRLRRVFREARARAPTVMVLDEVEALCPRREAASPDLDRRMVATLLALLDGFQGLDRVVVLAATSRPQALDPALRRPGRLDRELEVGVPGEAARGEILRVLLAGTGLESEVAADKV------------------LQRVASRAHGFVGADLLLVCKEAAMLAVRR-------GMEAAGGGAGRDGGDPVR---------MTGEDLAAALALVRPSALREVAVEVPRVQWGDIGGMDRVKQSLRECVEWPLTRPEAFVRMGIAPPKGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESEKALQGLFKKARAAAPTVVFFDEVDALAGRRGDGEDCKA--SERVLSQLLTELDGVQPLRRVVVVAATNRPDLLDPALLRPGRIDRRVYVPPPDLASRREILKIALRGVPTESPEGEASEGAGLDLEELARRTEGFSGAEVVALSREAALCAVEEDPVHARLLRGRHFEQALAGWQRQITPRMLEYYRRYAGG 814          
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: A0A662YE32_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YE32_9STRA)

HSP 1 Score: 587 bits (1513), Expect = 3.350e-190
Identity = 305/580 (52.59%), Postives = 399/580 (68.79%), Query Frame = 1
Query: 1648 RDGDWGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQAS-SEAQRRVVSTMLALMDGVDAQEQVVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEESTSAEGLPT--LTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQGGVR 3378
            R   + S+GGL  +++ +RE +E PLT+P+   ++G+  P+GVLLYGPPGTGKT +ARA A+     V  +NG E++S+FVGESE  LR  F  A+R AP L+  DE+D LCP+RD  S  + ++R+V+T+L LMDG+    QVVV+A TNRP ALDPA+RRPGR D EVEIG+P A+ R  IL+V LR +PHA+  A                     E+++L+A  HG+VGADL  L KEAAL AL R                  A   E      E LP   +T  D + A+  V PS LRE+AV+VP V W DIGG E +KQ+LRE VEWPLRHPEAF RMG+ PP+GVLLYGPPGCSKTL A+ALATESGMNF+A+KGPEL SKW+GESE+ ++ +F++AR A+PT++FFDE+DALA  RG GG   +G T+RVL+QLLTELDG++P+KR++VVAATNRPD++DPALLRPGR+DR +YV PPD  +R++IL +     P A DV+ + LA  T  FSGAE+ ALCREA++ A+EEDR+A  V + H + AL  + PQI   +LA +  F+ G R
Sbjct:  216 RSDGFASIGGLREELKAIREVVEQPLTNPEAFARFGLPAPKGVLLYGPPGTGKTLIARALARELHARVFTINGPEVVSKFVGESEANLRAVFMRAAREAPSLVFIDELDALCPKRDAHSVGDMEQRLVATLLTLMDGLSGARQVVVLAATNRPNALDPAVRRPGRFDREVEIGIPRASDRLAILQVALRRLPHALTTA---------------------ELQQLSASAHGYVGADLSALCKEAALLALHRAV----------------ANAPERSQGVLEPLPRFQVTLGDLQLAMRGVRPSALREIAVDVPRVLWSDIGGQETLKQALREAVEWPLRHPEAFTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREVFRKARAASPTVVFFDEIDALASTRGAGGGGSSGVTDRVLSQLLTELDGLEPLKRVLVVAATNRPDLLDPALLRPGRIDRALYVAPPDVAARKQILHIHTRATPLAADVNADELAVATARFSGAELRALCREAALAAVEEDRAAAAVAKRHFVRALANVTPQINDQMLAFFQRFRDGQR 758          
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: A0A1Y1Y9L2_9FUNG (AAA-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y9L2_9FUNG)

HSP 1 Score: 585 bits (1508), Expect = 4.900e-190
Identity = 295/570 (51.75%), Postives = 399/570 (70.00%), Query Frame = 1
Query: 1666 SVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQ---VVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEESTSAEGLPTLTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQ 3366
            S+GGL  +++ +RE +ELPL  P++ R++G++PP+GVLL+GPPGTGKT +ARA A     HVI VNG E++S+F GE+E  LR  F EA   +P +I  DEID LCP+RD A +E ++RVV+T+L LMDGV    Q   VV+I  TNRP ALD ALRRPGR D EVEIG+P+A  RA ILE LLR +P+ +                        +++++A+ +HG+VGADL  + +EA L+ ++R+   G                    S   EGL  +   D R AL  + PS +RE+ +EVP V W DIGGM+ VK  L+E VEWPL+HPEAF RMG+ PP+GVLLYGPPGCSKTLMA+ALATE+G+NF+AVKGPEL SKW+GESE+A++ +F++AR ++P+I+FFDE+DAL  +RG G + G    +RVL+QLL ELDG++P+  + VVAATNRPD+ID ALLRPGR+DR++Y+ PPDA +RREILRL  +K+PC+ DVD E L  +TEG SGAE+VALC+EA++CA+ +D  A Q+  +H +EALG M  +ITP ++  Y  F+
Sbjct:  188 SIGGLEHEVKIVREMVELPLQKPEVYRRFGLKPPKGVLLFGPPGTGKTLIARAVASETQSHVICVNGPEILSKFYGETEAKLRAIFEEAEENSPSIIFIDEIDALCPKRDDAPNELEKRVVATLLTLMDGVSTGSQTSRVVIIGATNRPNALDEALRRPGRFDREVEIGIPNANARASILEALLRRIPNTL---------------------DKDDIQKIASISHGYVGADLVAVCREAGLKTIKRSIQNG--------------------SDPKEGL-LINYDDMRTALSEIRPSAMREIMIEVPKVHWTDIGGMDEVKMKLKESVEWPLQHPEAFERMGIRPPKGVLLYGPPGCSKTLMAKALATEAGLNFIAVKGPELFSKWVGESEKAVREVFRKARASSPSIVFFDEIDALTVKRGSG-QDGTSVADRVLSQLLNELDGVEPLINVTVVAATNRPDIIDSALLRPGRIDRILYISPPDAAARREILRLQFSKMPCSSDVDIEELTAKTEGCSGAEIVALCQEAALCAMNQDCDAKQISHSHFVEALGSMTRRITPEMIRFYDDFR 714          
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: A0A8H7PRZ7_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PRZ7_MORIS)

HSP 1 Score: 582 bits (1501), Expect = 9.830e-189
Identity = 294/575 (51.13%), Postives = 394/575 (68.52%), Query Frame = 1
Query: 1660 WGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQ------VVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEESTSAEGLPTLTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQ 3366
            + ++GGL  QI+ +RE +E PL +P I +KY VRPPRGVLLYGPPGTGKT +ARA A     HVI++NG+E++S+F GE+E  LR  F EA   AP +I  DEID LCP+RD+A  E ++RVV+T+L LMDG+    Q      +VVI  TNRP ALD ALRRPGR D EVEIG+P+A  R  IL  +LR +P+++ +                      +V+ LAA +HG+VGADL  + +EA L+ + R               C+D   E+     A     +T  D +AA+  + PS +RE+ +EVP V W DIGG   VK  L+E VEWPL+HP+AF RMG+ PP+GVLLYGPPGCSKTLMA+ALATE+G+NF+AVKGPEL SKW+GESERA++ +F++AR A+P+IIFFDE+DAL  +RG  G+ G    +RVL+QLL ELDGI+P+  + VVAATNRPD+IDPALLRPGR+DR++YV PPD  SRREI RL LAK+ C+ D+  + LA +T G+SGAE+VA+C+EA++ A+E D  A  ++  H  +A+  M+ +ITP ++  Y  F+
Sbjct:  197 YSNIGGLEEQIRIVREMVETPLQNPQIFQKYDVRPPRGVLLYGPPGTGKTLIARAVASETNAHVILINGAEVLSKFYGETEQKLRNIFEEAQERAPSIIFIDEIDALCPKRDEAPGEMEKRVVATLLTLMDGISTSPQAKRQAGIVVIGATNRPNALDEALRRPGRFDREVEIGIPNAIARYSILSTILRKIPNSLENE---------------------QVESLAATSHGYVGADLSAVCREAGLKCINRL--------------CADPLWEQSRDMQAV---VVTYEDMKAAMAEIRPSAMREIMLEVPKVYWNDIGGQADVKSKLKESVEWPLKHPDAFARMGIRPPKGVLLYGPPGCSKTLMAKALATEAGLNFIAVKGPELFSKWVGESERAVREVFRKARAASPSIIFFDEIDALTVKRGSDGDGGTSVADRVLSQLLNELDGIEPLVNVTVVAATNRPDIIDPALLRPGRIDRILYVNPPDLASRREIFRLQLAKIQCSPDISADELAEKTNGYSGAEIVAICQEAALQAMEADIHAQMIKAIHFSKAIISMKKRITPEMIQFYDDFR 733          
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: H3G7P5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7P5_PHYRM)

HSP 1 Score: 573 bits (1477), Expect = 3.310e-188
Identity = 293/568 (51.58%), Postives = 396/568 (69.72%), Query Frame = 1
Query: 1669 VGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQVVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEESTSAEGLPT--LTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQ 3366
            +GGL  +++ +RE +E PLT+P++  ++G+  P+GVLL+GPPGTGKT +AR  A+     V  +NG E++S+FVGESE  LR  FA+A+R AP L+  DE+D +CP+RD    + +RR+V+T+L LMDG+ +  QVVV+A TNRP ALDPA+RRPGR D EVEIG+P A  R  IL V LR +PH + ++                     +++EL+A  HG+VGADL  L KEAAL AL R             A  S+A        +   LP   +T +D + A+  + PS LRE++V+VP V W DIGG   +KQSLRE VEWPL+HPEAF RMG+ PP+GVLLYGPPGCSKTL A+ALATESGMNF+A+KGPEL SKW+GESE+ ++ +F++AR A+PT++FFDE+DALA  RG GG +GA  ++RVL+QLLTELDG++P+KR++VVAATNRPD++DPAL+RPGR+DR +YV PPD  +R +IL++     P A DV    LA  +  FSGAE+ ALCREA++ A+EEDR+AT V + H + AL  + PQI   +LA +  F+
Sbjct:    1 IGGLHEELKAIREVVEQPLTNPEMFERFGLPAPKGVLLFGPPGTGKTLIARTLARELNARVFTINGPEVVSKFVGESEANLRAVFAQAAREAPSLVFIDELDAICPKRDSRVGDMERRLVATLLTLMDGLTSSRQVVVLAATNRPNALDPAVRRPGRFDREVEIGIPRANDRLAILRVALRRLPHKLTNS---------------------QLQELSATAHGYVGADLSALCKEAALLALHR-------------AFASNAQASGAVLAATNSLPAFEITLSDLKLAMRGIRPSALREISVDVPRVLWSDIGGQSALKQSLREAVEWPLQHPEAFTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREIFRKARAASPTVVFFDEIDALASTRGSGGSSGA--SDRVLSQLLTELDGLEPLKRVLVVAATNRPDLLDPALMRPGRIDRALYVSPPDVPAREQILQIHTRSTPLAPDVSLNELAIASARFSGAELRALCREAALHAVEEDRAATNVAKRHFVRALAVVTPQIDDRMLAFFERFR 532          
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: K3W9Z8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Z8_GLOUD)

HSP 1 Score: 572 bits (1475), Expect = 1.670e-187
Identity = 292/581 (50.26%), Postives = 400/581 (68.85%), Query Frame = 1
Query: 1666 SVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQVVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEESTSAEGLP------------TLTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQGG 3372
            SVGGL ++I+ +R+ IE PL +PD+ RK+G+ PP+G+L++GPPGTGKT +ARA A      +  +NG E++S+++GESE  LR+ F  A+R  P LI  DEID +CP+RD    + ++R+V+T+L LMDG++   QVVV+A TNRP ALDPA+RRPGR D EVEI +P+A  R +IL V L  +PH + D                      ++ EL+   HG+VGADL  L KEAAL AL+R                S A  ++  S ++  LP             +  AD + A+  + PS LRE+A++VP V W DIGG   +KQ L+E VEWPL+HPEAF+RMG+ PP+GVLLYGPPGCSKTL A+ALATES MNF+A+KGPEL SKW+GESE+A+Q++F++AR AAPT++FFDE+DA+A +RGGG   G+   +RVL+QLLTELDGI+P+K+++VVAATNRPD+ID AL+RPGR+DR++YV PPD  +R EIL +   K+P A DV+ + LA  T  FSGAE+ +LCREA++ A+EE ++A  V   H L AL  ++PQI  A+LA + +F+ G
Sbjct:   12 SVGGLKAEIETIRQIIEQPLVNPDMFRKFGLPPPKGLLMFGPPGTGKTMIARALAAELNAKIFFINGPEVVSKYIGESEANLRKIFENAARMGPSLIFIDEIDAICPKRDGRVGDMEKRMVATLLTLMDGLEKSAQVVVLAATNRPNALDPAIRRPGRFDREVEISIPNANDRLDILRVTLARLPHNVTDD---------------------QLLELSGSAHGYVGADLSALCKEAALLALQR----------------SFASRQQASSNASSALPHPLHPTTHIPSFVVEIADLKHAMNGIRPSALREIAIDVPRVLWNDIGGQHMIKQQLKEAVEWPLKHPEAFIRMGIRPPKGVLLYGPPGCSKTLTAKALATESSMNFIAIKGPELFSKWVGESEKAVQSIFRKARAAAPTVVFFDEIDAIASQRGGGDGGGSQVADRVLSQLLTELDGIEPLKQVLVVAATNRPDLIDSALMRPGRIDRVLYVGPPDLQARHEILSIHCRKIPLASDVNLQELAIATARFSGAELYSLCREAAMAAIEESKTADVVNTRHFLRALTLIQPQIDDAMLAFFDNFRLG 555          
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: G4YK00_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YK00_PHYSP)

HSP 1 Score: 578 bits (1491), Expect = 4.630e-187
Identity = 297/578 (51.38%), Postives = 402/578 (69.55%), Query Frame = 1
Query: 1666 SVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQVVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEEST-----SAEGLPT--LTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQGGVR 3378
            ++GGL  +++ +RE +E PLT+P+   ++G+  P+GVLL+GPPGTGKT +AR  A+     V  +NG E++S+FVGESE  LR  FA+A+R AP L+  DE+D +CP+RD    + +RR+V+T+L LMDG+ A  QVVV+A TNRP +LDPA+RRPGR D EVEIG+P A  R  IL V LR +PH + ++                     E++EL++  HG+VGADL  L KEAAL AL R                  A  +  +ST     S++ LP   +T +D + A+  + PS LRE++V+VP V W DIGG + +KQ+LRE VEWPL+HPEAF RMG+ PP+GVLLYGPPGCSKTL A+ALATESGMNF+A+KGPEL SKW+GESE+ ++ +F++AR A+PT++FFDE+DALA  RG GG  G+GA++RVL+QLLTELDG++P+KR++VVAATNRPD++DPAL+RPGR+DR +YV PPD   R +IL++   K P A DV    LA  T  FSGAE+ ALCREA++ A+EEDR+A  V + H + AL  + PQI   +LA +  F+ G R
Sbjct:  218 AIGGLHEELKAIREVVEQPLTNPETFERFGLPAPKGVLLFGPPGTGKTLIARTLARELNARVFTINGPEVVSKFVGESEANLRAVFAQAAREAPSLVFIDELDAICPKRDSRVGDMERRLVATLLTLMDGLSASRQVVVLAATNRPNSLDPAVRRPGRFDREVEIGIPRAKDRLAILRVALRRLPHKLTNS---------------------ELQELSSSAHGYVGADLSALCKEAALLALHR------------------AFADNAQSTGAVLASSDSLPAFEVTLSDLKLAMRGIRPSALREISVDVPRVLWNDIGGQDALKQALREAVEWPLQHPEAFTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREVFRKARAASPTVVFFDEIDALASTRGSGG--GSGASDRVLSQLLTELDGLEPLKRVLVVAATNRPDLLDPALMRPGRIDRALYVSPPDVPVREQILQIHTRKTPLASDVSLAELAIATARFSGAELQALCREAALHAVEEDRAAVNVAKRHFVRALSIVTPQIDDRMLAFFERFRDGQR 754          
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Match: A0A3M6VJ41_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJ41_9STRA)

HSP 1 Score: 578 bits (1491), Expect = 4.630e-187
Identity = 300/581 (51.64%), Postives = 405/581 (69.71%), Query Frame = 1
Query: 1642 TPRDGDWGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGTGKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQVVVIACTNRPQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSPGGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTRGGGDWGSLSARAGCSDAGVEEEESTSAEGLPT--LTAADFRAALPLVAPSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKVPCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQGGVR 3378
            T +DG + ++GGL  +++ +RE +E PLT+P+   ++G+  P+GVLL+GPPGTGKT +ARA A+     V  +NG E++S+FVGESE  LR  FA+A+R AP L+  DE+D +CP+RD    + +RR+V+T+L LMDG+ +  QVVV+A TNRP ALDPA+RRPGR D EVEIG+P A  R EIL + LR +PH + ++                     E+ EL++  HG+VGADL  L KEAAL AL R                  +G    ESTS   LP+  +T  D + A+  + PS LRE++V+VP V W DIGG + +KQSLRE VEWPL+HPEAF RMG+ PP+GVLLYGPPGCSKTL A+ALATESGMNF+A+KGPEL SKW+GESE+ ++ +F++AR A+PT++FFDE+DALA  RG GG +GA  ++RVL+QLLTELDG++P+KR++VVAATNRPD++DPAL+RPGR+DR +YV PPD  +R +ILR+   + P A DV    LA  T  +SGAE+ ALCREA++ A+EEDR+A  V + H + AL  + PQI   +LA +  F+   R
Sbjct:  211 TKQDG-FAAIGGLHKELKAVREVVEQPLTNPETFERFGLPAPKGVLLFGPPGTGKTLIARALARELNARVFTINGPEVVSKFVGESEANLRAVFAQAAREAPSLVFIDELDAICPKRDSRVGDMERRLVATLLTLMDGLSSSRQVVVLAATNRPNALDPAVRRPGRFDREVEIGIPTANDRLEILRIALRRLPHKLTNS---------------------ELLELSSSAHGYVGADLSALCKEAALLALHRAFANS----------AQSSGAVLAESTS---LPSYQVTLGDLKVAMRGIRPSALREISVDVPRVLWRDIGGQDALKQSLREAVEWPLQHPEAFTRMGIRPPKGVLLYGPPGCSKTLTAKALATESGMNFIAIKGPELFSKWVGESEQQVREVFRKARAASPTVVFFDEIDALASTRGTGGSSGA--SDRVLSQLLTELDGLEPLKRVLVVAATNRPDLLDPALMRPGRIDRALYVSPPDVSAREQILRIHTRQTPLASDVGMTELAIATARYSGAELQALCREAALHAVEEDRAAMNVAKRHFVRALSVVTPQIDDQMLAFFERFRDKQR 754          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1348.2074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT73_ECTSI0.000e+093.23Similar to spermatogenesis associated factor SPAF ... [more]
L8H211_ACACA1.310e-19351.35ATPase, AAA domain containing protein n=1 Tax=Acan... [more]
A0A4D9CZ55_9STRA4.920e-19357.09Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A662YE32_9STRA3.350e-19052.59Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A1Y1Y9L2_9FUNG4.900e-19051.75AAA-domain-containing protein n=1 Tax=Basidiobolus... [more]
A0A8H7PRZ7_MORIS9.830e-18951.13Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
H3G7P5_PHYRM3.310e-18851.58Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
K3W9Z8_GLOUD1.670e-18750.26Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
G4YK00_PHYSP4.630e-18751.38Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A3M6VJ41_9STRA4.630e-18751.64Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1348contigE-siliculosus-1a_F_contig1348:2720..9729 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size3381
Model size3975
Exons9
Ec32 orthologEc-06_003850.1
Ec32 ortholog descriptionAAA ATPase domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko03009,ko03019,ko04131,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EggNOG OGsCOG0464@1,KOG0730@2759
EggNOG free text desc.ATP binding
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022613,GO:0030554,GO:0030684,GO:0030687,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042221,GO:0042254,GO:0042273,GO:0042493,GO:0043167,GO:0043168,GO:0044085,GO:0044464,GO:0050896,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904
KEGG ModuleM00400,M00403
KEGG Pathwayko03008,ko04141,ko05134,map03008,map04141,map05134
KEGG TC3.A.16.1
KEGG koko:K13525,ko:K14575
Preferred nameAFG2
Seed eggNOG ortholog2880.D7FT73
Seed ortholog evalue0.0
Seed ortholog score1977.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1348.2074.1prot_E-siliculosus-1a_F_contig1348.2074.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1348 3314..9729 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927862.5459025-UTR-E-siliculosus-1a_F_contig1348:2719..33131622927862.5459025-UTR-E-siliculosus-1a_F_contig1348:2719..3313Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1348 2720..3313 -
1696318713.5449424-UTR-E-siliculosus-1a_F_contig1348:2719..33131696318713.5449424-UTR-E-siliculosus-1a_F_contig1348:2719..3313Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1348 2720..3313 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927862.5565841-CDS-E-siliculosus-1a_F_contig1348:3313..34781622927862.5565841-CDS-E-siliculosus-1a_F_contig1348:3313..3478Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 3314..3478 -
1696318713.5578127-CDS-E-siliculosus-1a_F_contig1348:3313..34781696318713.5578127-CDS-E-siliculosus-1a_F_contig1348:3313..3478Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 3314..3478 -
1622927862.5665848-CDS-E-siliculosus-1a_F_contig1348:3983..42321622927862.5665848-CDS-E-siliculosus-1a_F_contig1348:3983..4232Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 3984..4232 -
1696318713.5682163-CDS-E-siliculosus-1a_F_contig1348:3983..42321696318713.5682163-CDS-E-siliculosus-1a_F_contig1348:3983..4232Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 3984..4232 -
1622927862.8549588-CDS-E-siliculosus-1a_F_contig1348:4749..49281622927862.8549588-CDS-E-siliculosus-1a_F_contig1348:4749..4928Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 4750..4928 -
1696318713.5783062-CDS-E-siliculosus-1a_F_contig1348:4749..49281696318713.5783062-CDS-E-siliculosus-1a_F_contig1348:4749..4928Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 4750..4928 -
1622927862.8709552-CDS-E-siliculosus-1a_F_contig1348:5155..53121622927862.8709552-CDS-E-siliculosus-1a_F_contig1348:5155..5312Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 5156..5312 -
1696318713.587604-CDS-E-siliculosus-1a_F_contig1348:5155..53121696318713.587604-CDS-E-siliculosus-1a_F_contig1348:5155..5312Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 5156..5312 -
1622927862.8877337-CDS-E-siliculosus-1a_F_contig1348:5605..60891622927862.8877337-CDS-E-siliculosus-1a_F_contig1348:5605..6089Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 5606..6089 -
1696318713.599047-CDS-E-siliculosus-1a_F_contig1348:5605..60891696318713.599047-CDS-E-siliculosus-1a_F_contig1348:5605..6089Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 5606..6089 -
1622927862.9044282-CDS-E-siliculosus-1a_F_contig1348:6479..65531622927862.9044282-CDS-E-siliculosus-1a_F_contig1348:6479..6553Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 6480..6553 -
1696318713.606843-CDS-E-siliculosus-1a_F_contig1348:6479..65531696318713.606843-CDS-E-siliculosus-1a_F_contig1348:6479..6553Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 6480..6553 -
1622927862.9182594-CDS-E-siliculosus-1a_F_contig1348:6868..70581622927862.9182594-CDS-E-siliculosus-1a_F_contig1348:6868..7058Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 6869..7058 -
1696318713.6170554-CDS-E-siliculosus-1a_F_contig1348:6868..70581696318713.6170554-CDS-E-siliculosus-1a_F_contig1348:6868..7058Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 6869..7058 -
1622927862.9396567-CDS-E-siliculosus-1a_F_contig1348:7431..91691622927862.9396567-CDS-E-siliculosus-1a_F_contig1348:7431..9169Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 7432..9169 -
1696318713.6268973-CDS-E-siliculosus-1a_F_contig1348:7431..91691696318713.6268973-CDS-E-siliculosus-1a_F_contig1348:7431..9169Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 7432..9169 -
1622927862.9573078-CDS-E-siliculosus-1a_F_contig1348:9584..97291622927862.9573078-CDS-E-siliculosus-1a_F_contig1348:9584..9729Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 9585..9729 -
1696318713.6368988-CDS-E-siliculosus-1a_F_contig1348:9584..97291696318713.6368988-CDS-E-siliculosus-1a_F_contig1348:9584..9729Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1348 9585..9729 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1348.2074.1

>prot_E-siliculosus-1a_F_contig1348.2074.1 ID=prot_E-siliculosus-1a_F_contig1348.2074.1|Name=mRNA_E-siliculosus-1a_F_contig1348.2074.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1127bp
MGKGRRGSGVTLANSPHRLEQHEAEGGWRGRVRMLSSSTLGAAATKEDGG
RIVALTEEDFRKSGFRSRELVAVLAGPSRLIAGRICSLPSAALRPGGVGL
SSASAQSLLGCDIEDAAGAGGEGARVRVRRLSDTSATIVTASSLDLILEA
GVGLPGGRSGGGGGPVAQQGSLSTTSSPRVYLERLAAGRMALLQRAAGYC
AYGTHARGGDVLSVSFEGVPHLFRVATLEPPIPSRQHTAAVATAAAKVKA
SEADDVTGDSLVAPLAALSVSEPRVAESTPGKPATVAPPPPPVAAPADHG
QDGTAAGVPAATTDSANGSSAEPRREDSATAVARVRLEAFYREHNPDKLV
VGGIDGILDKYAGREETLFAKLEKKYGAGSSLLRTTTAGGNTGTERQQQQ
QQQQQQQQQQQQQQQAHSVAMPGTPARSGSFSTGSGQQSSPANVLGRRIA
GGPHPPGTPSALRQRVENRDGSGGRGGDEPTGIRSWGAGETLWFVAADTA
IRLSAADARSPEGDDGGTRLQTSADPSGTKRALGGGECSQQRGAGGGTPR
DGDWGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLYGPPGT
GKTTLARAAAKACGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPC
LIVFDEIDTLCPRRDQASSEAQRRVVSTMLALMDGVDAQEQVVVIACTNR
PQALDPALRRPGRLDSEVEIGVPDAAGRAEILEVLLRGVPHAMADANNSP
GGEGGRGEANSKSGPSGEVKELAARTHGFVGADLQLLVKEAALQALRRTR
GGGDWGSLSARAGCSDAGVEEEESTSAEGLPTLTAADFRAALPLVAPSGL
REVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGV
LLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFK
RARTAAPTIIFFDEVDALACRRGGGGETGAGATERVLTQLLTELDGIQPV
KRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDALSRREILRLSLAKV
PCAGDVDHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLL
EALGQMRPQITPAVLASYASFQGGVR*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1348:2720..9729-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1348.2074.1 ID=mRNA_E-siliculosus-1a_F_contig1348.2074.1|Name=mRNA_E-siliculosus-1a_F_contig1348.2074.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7010bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1348:2720..9729- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGCAAAGGACGAAGGGGAAGCGGCGTAACGCTAGCTAATAGTCCGCA TCGGCTGGAGCAACACGAGGCTGAGGGAGGATGGCGTGGCAGGGTCAGAA TGTTGTCGTCGTCAACGCTTGGAGCGGCGGCCACCAAGGAAGACGGTGTG TGCTTGCTATGTGGTGGCTTTGAGTCCCATTGCTGTGCTGATGGGTGTGC ATCGCTCTGCTTGTTTTTGTCTGTGCTTGCGCGAGTGGTTGTGGTCATGA TGGACAATATCATGTCACCGATGTTTCGGGCGGCCATCTTGACACTCGCA TTACCACCGCGCCTATGCGTTGTGGCTCAACATTTTCGACTTGGAGGTTG GTGCTGAGGAACCCCGGGAGCTAGTAGCTGTTGAACGGCCTGCTCAATGG ACAGGACGCTGCTTTGGTATTGCACGATACGGCATCCACTTTAACAGAAA TACTACAATGCACGCGACTCTGTACTTTTGCGGCACAACCCACACGGAAA ATCATCCCATCTCCGCGCACCTAAGTACGCCGTCCTTATCCTTGCCCAAC GACAACAAAGGTGGACGAATAGTAGCCCTGACGGAGGAGGACTTCCGCAA GAGTGGCTTCCGGTCGAGAGAGCTCGTTGCCGTCTTGGCTGGCCCGAGCA GACTAATCGCGGGGCGTATCTGTTCTCTCCCGTCGGCAGCGCTGCGTCCG GGTGGCGTCGGCCTGAGCTCCGCCTCGGCCCAAAGCCTGCTCGGTTGCGA CATCGAAGATGCAGCGGGAGCAGGAGGGGAAGGCGCCCGAGTGCGGGTCC GCCGTTTGTCCGACACGTCCGCTACGATAGTAACGGCCAGCTCGTTGGAT CTTATCTTGGAGGCCGGCGTTGGGTTGCCGGGCGGAAGGAGTGGGGGCGG GGGGGGTCCGGTGGCGCAGCAGGGGTCGCTGTCAACGACATCGTCGCCCC GCGTGTACCTAGAGAGGCTGGCGGCGGGTAGAATGGCGCTGCTGCAACGG GCGGCGGGGTATTGCGCCTACGGGACTCATGCGCGGGGGGGCGACGTGCT GTCGGTGTCGTTCGAAGGCGTACCCCACCTCTTCCGGGTGGCGACACTCG AACCGCCCATTCCTAGCCGTCAGCATACAGCAGCAGTAGCGACCGCAGCA GCCAAAGTGAAAGCGTCAGAGGCTGACGATGTCACTGGCGACTCTCTCGT GGCGCCGTTGGCGGCCCTTTCAGTATCTGAGCCGCGCGTTGCAGAGTCAA CGCCCGGGAAACCGGCGACGGTGGCGCCGCCGCCGCCTCCTGTCGCAGCG CCAGCTGATCATGGGCAAGACGGTACGGCAGCAGGAGTGCCAGCAGCAAC AACGGACAGTGCCAACGGAAGCAGCGCGGAGCCACGAAGAGAGGACAGCG CGACGGCGGTGGCGCGTGTGCGCTTGGAGGCGTTCTACCGGGAGCACAAC CCGGACAAGCTAGTAGTCGGCGGCATCGACGGCATTCTCGACAAGTACGC CGGGCGCGAAGAAACGCTCTTCGCCAAGCTGGAAAAGAAGTACGGCGCCG GGTCATCTCTGCTGCGAACGACCACGGCGGGCGGGAACACCGGGACTGAG AGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCA ACAGCAGCAGGCACACTCGGTTGCGATGCCGGGGACTCCTGCTAGATCTG GCTCCTTCTCCACTGGTTCAGGACAACAATCCTCGCCGGCAAACGTTCTT GGAAGACGGATCGCAGGAGGACCGCACCCTCCAGGAACCCCGTCAGCGCT GCGCCAACGAGTTGAAAACCGTGACGGCAGCGGTGGGCGCGGGGGCGATG AACCTACCGGAATTCGATCGTGGGGTGCTGGCGAGACGCTCTGGTTCGTC GCCGCGGACACGGCGATTCGGCTTTCGGCCGCCGACGCTCGTTCGCCGGA AGGCGATGATGGCGGGACAAGGTTGCAGACAAGTGCAGATCCCTCCGGCA CGAAACGCGCGCTTGGTGGTGGCGAATGTTCTCAACAAAGAGGGGCGGGA GGCGGCACACCACGCGACGGCGATTGGGGATCCGTGGGAGGGCTCTCGTC TCAGATCCAGCAGCTCAGGGAGGCCATCGAGTTGCCCCTGACGTCCCCAG ACATTCTACGGAAATACGGAGTTCGCCCTCCTCGAGGCGTTCTGCTTTAT GGACCGCCGGGGACGGGGAAGACCACGCTAGCTAGGGCGGCGGCGAAGGC GTGCGGGTGCCATGTTATCGTCGTCAACGGCTCGGAGCTGATGTCAAGGT GGGTGGGGGCGATAGCGCTGCTGACGAGAAAGACACAGAAAGTTGACGTG AGGATGGAGGGCTTTATGTCGTTGGATGTCGTTGGACCTGCGTATTTTCT GCAACACATGGGTGGACGACCTCAAGCTCGGGGTGGTACCATGTGTTCAT ATGTTGTTAGCTTGTGGTCGTGATGTTTGTCGTCGCTGCGTTGCCGGTTC GTTACCATATTTTCAGTGCATCCCACCTCTACATGCAGGTCGCCTCTCCA CTCGTTTCTGCACGGGAACGAGTGATCACATTTCATCTGATAGCCCGCTC TTGCTGCTCTTGTACTTCCGCTGCCACAATGTCGACCAACGGCGACTACC GCACCCGCGATAAAACGGCAGGTTTGTGGGCGAAAGCGAGGGCGCGCTTC GCCAGAGGTTCGCGGAGGCCTCGCGTTGCGCGCCGTGCCTGATCGTGTTC GACGAGATCGACACGCTTTGCCCCCGGCGGGACCAGGCCAGCAGCGAGGC GCAGCGCAGGGTGGTCTCCACCATGCTGGCTCTGATGGACGGGGTGGACG CTCAAGAACAGGTGTGTGGCTTAGGGTGCTGACTGCAAAAAACAGAGGCC GGATGGGTGATAGACTGTGGTACATGCTGCTGCACCCCAACAATCGGTCC TCCTGGAAGTAGGTCTTTGCGGCCCCAAGCCTCTGGAGACGCTTTGGCTC CAAGCCGCCCACATCAAACGTTGTGCCAGCTGCTGTTGCAGAACTCGTTG GCCGCGCGCAGTTGTGAGATGCCCGGCATGAACCGGTCGTCAACCGAGCG GTGCTTGGCCGAATTCGTTTTGGCTCGTACATACTGACGACAGTTCGTTC GCTGCCTATCCGTCCGACGTCGCCAGGTGGTGGTGATTGCGTGCACGAAC AGGCCTCAAGCGCTTGATCCCGCCCTGCGAAGGCCCGGTCGCTTGGACAG GTTAGTGCAGCTACAGTATTTACCGAGGTGCTGTACGTGTGCCTTACTAT TGCCCTCAGGGGAGTCTGCTGGCCGCTCGAAATGAGCAGGCCTGGCCACC CCGTGCAATTGTCGCGAACAACAAGCGTATCTCACGACCCATGCTGGAAT ACTCACAGAGCTACATGGCCGAAGTGCATCAGGCACTTGCTCCCAAAGAG CATAGACAACATTTGACACTGTCTCGAGACATGTCATCCGACTGCCGGTA TTCAACCGAGCAAGTTCTGCCCCGCGTATCCACCCTTCCGCCTGGGCGTA TTCCTCCGCTGCAACACTTTCTCGTTCTGATTTCCGCTTGTGCCGTGCAC GCCGACGTGGCGCTCGGCACATCGTTTTTTTATTCGCCAGCGAGGTAGAG ATCGGCGTCCCTGATGCAGCTGGCCGGGCCGAGATCCTCGAAGTCTTGCT TCGCGGGGTCCCCCACGCCATGGCGGACGCGAACAACTCTCCGGGCGGCG AAGGCGGAAGAGGCGAGGCCAACAGCAAGAGCGGCCCAAGCGGAGAGGTG AAAGAGCTCGCCGCTCGCACGCACGGCTTCGTGGGCGCGGACTTGCAGCT CTTGGTGAAGGAGGCGGCTCTGCAGGCGCTTCGGAGGACTCGGGGCGGCG GTGATTGGGGAAGTCTTTCTGCGAGGGCTGGCTGTAGTGACGCCGGCGTC GAGGAGGAGGAGAGTACGAGCGCGGAGGGACTGCCAACGCTGACGGCCGC GGATTTTCGGGCGGCGTTGCCGTTGGTGGCTCCGAGTGGGCTGAGGGAGG TGGCGGTGGAGGTCCCGAGCGTGAAGTGGGGGGACATCGGGGGCATGGAG GGCGTCAAGCAGAGCTTGAGGGAGGTGAGTGCGAGTTTCGAGGGGGCCGA GAGGCGCCCTCGAGGCTGGAGTTGACAGCCGAGAGAACTGAAGGGTGGCG GGGCGCTTCGTGCCGTTGCCCTGCCTCTGCATTTCTCGTCGTTGGCGTGT CGTAACAAAAGTGATTACAAGCACTCAACTTGGCAAAAAAAAACAGAGAA TCACCCCGAATCCTCCGATACTTCAATACGAGACTGACTCACAAGGACAT CGCAGCAAGAGCAACTGAAAACACTCACGGTGTTTAAATGTCATCGTTGG TAAACGGTCCCGTACAGGTGGTGGAATGGCCGCTCAGGCACCCGGAGGCG TTCTTGAGGATGGGCATGTCGCCGCCTCGAGGCGTGCTGCTGTACGGCCC CCCAGGATGCAGCAAGACGCTCATGGCAAGGGCGCTGGCGACGGAATCTG GCATGAATTTCCTCGCCGTGAAGGGTTAGTCCGCACGCCTTGAGATGAGC CTTCCTGTGGGAAAAACGTAGCCGCGCGCGAATGACCTTGCGTGCTGCTG TTGTCAGGGTCCGTCTATTTTTTGCCAGTTACGCTATCGATATTGAATGT GCGTCTGTTCCAAACAGCAAGCAGTTTTGGTCTACATACCGGAGAACGAC CTAAGGTGTACTGCCTGCCCCACGCTTTGGCTGGGTGTTGCTGCACCACA GGGCCTGAGCTGCTGAGCAAATGGCTGGGTGAGTCAGAGCGAGCCATGCA AGCTCTCTTCAAGAGGGCCCGAACGGCCGCGCCAACGATCATTTTTTTCG ACGAAGTGGACGCTCTCGCTTGCAGGCGAGGAGGCGGCGGGGAAACAGGA GCTGGCGCTACGGAACGCGTGCTGACGCAGGTATTCACGAACAGAGTTCC CCGCTTGTTTAGTGTGTCTGCTGAAAGCTCACGCGACGGGATCGCCTGAG ACGAGACATGTCGCCTATAGACTATACGGAAGAAGCGGGATTCACAACAC ACGCATTAGAAGGAGCGAGAATGGCACACGTTGGGACCCGTTTTCGGAAG GATATTGCGTGTCAATCTCCGAGCACACTTCGCTGATTAGTGGTGGCATG CCTTCCGCTGCTTCCCCTCGCCCGCCGTTATTGCTAGGTTGAGCCTGGCC CGACGAACGCTGGCCACGTTACCTCTCAGCTCTGCCCAACATCCAGACAC AAGCGCTTGTAAACTCGATTGTACATCCACGTTTTTCATCAGTACCGAGA AACAGGAGCAGCATAGGTCATACCCTACGCCCACTACATCTATCTCGAAA AAATCCGATAACATCCCCCCCCCCCTGAACAGGGAAGAGTCATCCATGCC TACATATCACCCTCTGATCTCTTCAATCCCCCCGCGCCCTTGTCCAGCTC CTGACGGAGCTCGACGGAATCCAACCGGTGAAGCGCCTGGTCGTTGTGGC GGCAACCAACCGCCCGGACGTGATCGACCCGGCGTTGCTGCGCCCCGGGC GGTTGGACCGCCTGGTGTACGTGCCCCCGCCGGACGCGTTGTCCCGTCGG GAGATCCTGCGGCTGTCTCTGGCCAAGGTGCCCTGTGCGGGCGACGTGGA CCACGAGGCGCTAGCGCGACGAACGGAGGGATTTTCGGGCGCCGAGGTGG GTCGGGTTGGCCTTGAGCTCTTTTTTTTTGCGGGGGTATTGTTTTTGTGC TCTGGATTGCGCTGGTGTGAAGGTGTTTGCGTATTCGCGATAGGGGCGGC TTTGTGCCTTTCCCTGCCTAGGGCTTTGTATGCCCTGTTGAAAACGGGCG ACAGGTTACACTGCCGGACTGCTGGTGGTTTTGGTTTTCGTTGTGGGTTT GGTTTACGCCCGCCGCGCAACCAGCATCTAACACCAGCCAGCATGCGGAT CGAGGCTTGCCCCGGCCTTTTTTGTCACATGCTTATTCTGCAAAAATCAA GGGGTTCGCTTTCGACAAAGTTGCCCCCGCACCCCCCTGGTCCGGTGAGA ACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTC ACGACTACGGCATGCACGACTATGAGTACCCCTCCCCCTCCCCCCTACGC CCTCGCAATCGGCACGCTCCTGTGGGTGTTTCGATGCTGCCCTCCGTCCA GGTAGTGGCTCTTTGCCGGGAAGCATCCATCTGTGCGCTCGAAGAAGACC GATCAGCTACGCAAGTCCGCCAAGCGCACCTCCTCGAGGCTTTGGGGCAG ATGCGACCGCAGATCACGCCCGCGGTTCTGGCCTCGTATGCCTCGTTTCA GGGGGGGGTGCGATGATGAGCAGAAGAAGAGAGATAGGAGTGGCGTTGCA GTGCAAGTTTAGATGCATCGGCAGCATCAGGTTTAGGGATAGTCTTGGGT TAGTTAAGCGTGGTTTGGACAATCAAAGACGTCATGCCGGGATCCCTTGG TGTTCCTGAAGATTCGAAGAACAAGGCGGCCAGTCTTCTGCCGGGAAAGG CGGCAGCAGCATATTCCTGCGTGTGCTCGTCTTCACTTCGCAGGCCTCTT CCCTGTCCCCCAGGCTGTGGAGTATTGGGTATTTTGCACGTACGTTGTCC CTATTGATTGTTCAAGTTATTGAAGAGGTACGTAGCTACCGCGGCGCAGC TTGTTGTTACGCTGCTCGTGCCGAAGTTTTTCGACGGCGCACGTGTCGGC TACGGTGTTTGTTGTTGCTGGGTTGAGTGTGACTGGCTTGTCGACGGTGG TCTCGGCGGTGCTGAACGTGTAGACTACAGCAGTAGGTGCGAAACGATGC CGCCACGCTGCAGAGCGAGCAAAGTTTTCTTGGCCGTTGTCGTATCCTAC ACATGAAATGTCCTCCATAGTACCTAGCCTCACGAGTTGGTTCGCCGTCC AGACGTCCAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1348:2720..9729-

>mRNA_E-siliculosus-1a_F_contig1348.2074.1 ID=mRNA_E-siliculosus-1a_F_contig1348.2074.1|Name=mRNA_E-siliculosus-1a_F_contig1348.2074.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6762bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1348:2720..9729- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGCAAAGGACGAAGGGGAAGCGGCGTAACGCTAGCTAATAGTCCGCA
TCGGCTGGAGCAACACGAGGCTGAGGGAGGATGGCGTGGCAGGGTCAGAA
TGTTGTCGTCGTCAACGCTTGGAGCGGCGGCCACCAAGGAAGACGATGGG
CAAAGGACGAAGGGGAAGCGGCGTAACGCTAGCTAATAGTCCGCATCGGC
TGGAGCAACACGAGGCTGAGGGAGGATGGCGTGGCAGGGTCAGAATGTTG
TCGTCGTCAACGCTTGGAGCGGCGGCCACCAAGGAAGACGGTGGACGAAT
AGTAGCCCTGACGGAGGAGGACTTCCGCAAGAGTGGCTTCCGGTCGAGAG
AGCTCGTTGCCGTCTTGGCTGGCCCGAGCAGACTAATCGCGGGGCGTATC
TGTTCTCTCCCGTCGGCAGCGCTGCGTCCGGGTGGCGTCGGCCTGAGCTC
CGCCTCGGCCCAAAGCCTGCTCGGTTGCGACATCGAAGATGCAGCGGGAG
CAGGAGGGGAAGGCGCCCGAGTGCGGGTCCGCCGTTTGTCCGACACGTCC
GCTACGATAGTAACGGCCAGCTCGTTGGATCTTATCTTGGAGGCCGGCGT
TGGGTTGCCGGGCGGAAGGAGTGGGGGCGGGGGGGGTCCGGTGGCGCAGC
AGGGGTCGCTGTCAACGACATCGTCGCCCCGCGTGTACCTAGAGAGGCTG
GCGGCGGGTAGAATGGCGCTGCTGCAACGGGCGGCGGGGTATTGCGCCTA
CGGGACTCATGCGCGGGGGGGCGACGTGCTGTCGGTGTCGTTCGAAGGCG
TACCCCACCTCTTCCGGGTGGCGACACTCGAACCGCCCATTCCTAGCCGT
CAGCATACAGCAGCAGTAGCGACCGCAGCAGCCAAAGTGAAAGCGTCAGA
GGCTGACGATGTCACTGGCGACTCTCTCGTGGCGCCGTTGGCGGCCCTTT
CAGTATCTGAGCCGCGCGTTGCAGAGTCAACGCCCGGGAAACCGGCGACG
GTGGCGCCGCCGCCGCCTCCTGTCGCAGCGCCAGCTGATCATGGGCAAGA
CGGTACGGCAGCAGGAGTGCCAGCAGCAACAACGGACAGTGCCAACGGAA
GCAGCGCGGAGCCACGAAGAGAGGACAGCGCGACGGCGGTGGCGCGTGTG
CGCTTGGAGGCGTTCTACCGGGAGCACAACCCGGACAAGCTAGTAGTCGG
CGGCATCGACGGCATTCTCGACAAGTACGCCGGGCGCGAAGAAACGCTCT
TCGCCAAGCTGGAAAAGAAGTACGGCGCCGGGTCATCTCTGCTGCGAACG
ACCACGGCGGGCGGGAACACCGGGACTGAGAGACAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGGCACACTCGG
TTGCGATGCCGGGGACTCCTGCTAGATCTGGCTCCTTCTCCACTGGTTCA
GGACAACAATCCTCGCCGGCAAACGTTCTTGGAAGACGGATCGCAGGAGG
ACCGCACCCTCCAGGAACCCCGTCAGCGCTGCGCCAACGAGTTGAAAACC
GTGACGGCAGCGGTGGGCGCGGGGGCGATGAACCTACCGGAATTCGATCG
TGGGGTGCTGGCGAGACGCTCTGGTTCGTCGCCGCGGACACGGCGATTCG
GCTTTCGGCCGCCGACGCTCGTTCGCCGGAAGGCGATGATGGCGGGACAA
GGTTGCAGACAAGTGCAGATCCCTCCGGCACGAAACGCGCGCTTGGTGGT
GGCGAATGTTCTCAACAAAGAGGGGCGGGAGGCGGCACACCACGCGACGG
CGATTGGGGATCCGTGGGAGGGCTCTCGTCTCAGATCCAGCAGCTCAGGG
AGGCCATCGAGTTGCCCCTGACGTCCCCAGACATTCTACGGAAATACGGA
GTTCGCCCTCCTCGAGGCGTTCTGCTTTATGGACCGCCGGGGACGGGGAA
GACCACGCTAGCTAGGGCGGCGGCGAAGGCGTGCGGGTGCCATGTTATCG
TCGTCAACGGCTCGGAGCTGATGTCAAGGTGGACGAATAGTAGCCCTGAC
GGAGGAGGACTTCCGCAAGAGTGGCTTCCGGTCGAGAGAGCTCGTTGCCG
TCTTGGCTGGCCCGAGCAGACTAATCGCGGGGCGTATCTGTTCTCTCCCG
TCGGCAGCGCTGCGTCCGGGTGGCGTCGGCCTGAGCTCCGCCTCGGCCCA
AAGCCTGCTCGGTTGCGACATCGAAGATGCAGCGGGAGCAGGAGGGGAAG
GCGCCCGAGTGCGGGTCCGCCGTTTGTCCGACACGTCCGCTACGATAGTA
ACGGCCAGCTCGTTGGATCTTATCTTGGAGGCCGGCGTTGGGTTGCCGGG
CGGAAGGAGTGGGGGCGGGGGGGGTCCGGTGGCGCAGCAGGGGTCGCTGT
CAACGACATCGTCGCCCCGCGTGTACCTAGAGAGGCTGGCGGCGGGTAGA
ATGGCGCTGCTGCAACGGGCGGCGGGGTATTGCGCCTACGGGACTCATGC
GCGGGGGGGCGACGTGCTGTCGGTGTCGTTCGAAGGCGTACCCCACCTCT
TCCGGGTGGCGACACTCGAACCGCCCATTCCTAGCCGTCAGCATACAGCA
GCAGTAGCGACCGCAGCAGCCAAAGTGAAAGCGTCAGAGGCTGACGATGT
CACTGGCGACTCTCTCGTGGCGCCGTTGGCGGCCCTTTCAGTATCTGAGC
CGCGCGTTGCAGAGTCAACGCCCGGGAAACCGGCGACGGTGGCGCCGCCG
CCGCCTCCTGTCGCAGCGCCAGCTGATCATGGGCAAGACGGTACGGCAGC
AGGAGTGCCAGCAGCAACAACGGACAGTGCCAACGGAAGCAGCGCGGAGC
CACGAAGAGAGGACAGCGCGACGGCGGTGGCGCGTGTGCGCTTGGAGGCG
TTCTACCGGGAGCACAACCCGGACAAGCTAGTAGTCGGCGGCATCGACGG
CATTCTCGACAAGTACGCCGGGCGCGAAGAAACGCTCTTCGCCAAGCTGG
AAAAGAAGTACGGCGCCGGGTCATCTCTGCTGCGAACGACCACGGCGGGC
GGGAACACCGGGACTGAGAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAACAGCAGCAACAGCAGCAGGCACACTCGGTTGCGATGCCGG
GGACTCCTGCTAGATCTGGCTCCTTCTCCACTGGTTCAGGACAACAATCC
TCGCCGGCAAACGTTCTTGGAAGACGGATCGCAGGAGGACCGCACCCTCC
AGGAACCCCGTCAGCGCTGCGCCAACGAGTTGAAAACCGTGACGGCAGCG
GTGGGCGCGGGGGCGATGAACCTACCGGAATTCGATCGTGGGGTGCTGGC
GAGACGCTCTGGTTCGTCGCCGCGGACACGGCGATTCGGCTTTCGGCCGC
CGACGCTCGTTCGCCGGAAGGCGATGATGGCGGGACAAGGTTGCAGACAA
GTGCAGATCCCTCCGGCACGAAACGCGCGCTTGGTGGTGGCGAATGTTCT
CAACAAAGAGGGGCGGGAGGCGGCACACCACGCGACGGCGATTGGGGATC
CGTGGGAGGGCTCTCGTCTCAGATCCAGCAGCTCAGGGAGGCCATCGAGT
TGCCCCTGACGTCCCCAGACATTCTACGGAAATACGGAGTTCGCCCTCCT
CGAGGCGTTCTGCTTTATGGACCGCCGGGGACGGGGAAGACCACGCTAGC
TAGGGCGGCGGCGAAGGCGTGCGGGTGCCATGTTATCGTCGTCAACGGCT
CGGAGCTGATGTCAAGGTTTGTGGGCGAAAGCGAGGGCGCGCTTCGCCAG
AGGTTCGCGGAGGCCTCGCGTTGCGCGCCGTGCCTGATCGTGTTCGACGA
GATCGACACGCTTTGCCCCCGGCGGGACCAGGCCAGCAGCGAGGCGCAGC
GCAGGGTGGTCTCCACCATGCTGGCTCTGATGGACGGGGTGGACGCTCAA
GAACAGGTTTGTGGGCGAAAGCGAGGGCGCGCTTCGCCAGAGGTTCGCGG
AGGCCTCGCGTTGCGCGCCGTGCCTGATCGTGTTCGACGAGATCGACACG
CTTTGCCCCCGGCGGGACCAGGCCAGCAGCGAGGCGCAGCGCAGGGTGGT
CTCCACCATGCTGGCTCTGATGGACGGGGTGGACGCTCAAGAACAGGTGG
TGGTGATTGCGTGCACGAACAGGCCTCAAGCGCTTGATCCCGCCCTGCGA
AGGCCCGGTCGCTTGGACAGGTGGTGGTGATTGCGTGCACGAACAGGCCT
CAAGCGCTTGATCCCGCCCTGCGAAGGCCCGGTCGCTTGGACAGCGAGGT
AGAGATCGGCGTCCCTGATGCAGCTGGCCGGGCCGAGATCCTCGAAGTCT
TGCTTCGCGGGGTCCCCCACGCCATGGCGGACGCGAACAACTCTCCGGGC
GGCGAAGGCGGAAGAGGCGAGGCCAACAGCAAGAGCGGCCCAAGCGGAGA
GGTGAAAGAGCTCGCCGCTCGCACGCACGGCTTCGTGGGCGCGGACTTGC
AGCTCTTGGTGAAGGAGGCGGCTCTGCAGGCGCTTCGGAGGACTCGGGGC
GGCGGTGATTGGGGAAGTCTTTCTGCGAGGGCTGGCTGTAGTGACGCCGG
CGTCGAGGAGGAGGAGAGTACGAGCGCGGAGGGACTGCCAACGCTGACGG
CCGCGGATTTTCGGGCGGCGTTGCCGTTGGTGGCTCCGAGTGGGCTGAGG
GAGGTGGCGGTGGAGGTCCCGAGCGTGAAGTGGGGGGACATCGGGGGCAT
GGAGGGCGTCAAGCAGAGCTTGAGGGAGCGAGGTAGAGATCGGCGTCCCT
GATGCAGCTGGCCGGGCCGAGATCCTCGAAGTCTTGCTTCGCGGGGTCCC
CCACGCCATGGCGGACGCGAACAACTCTCCGGGCGGCGAAGGCGGAAGAG
GCGAGGCCAACAGCAAGAGCGGCCCAAGCGGAGAGGTGAAAGAGCTCGCC
GCTCGCACGCACGGCTTCGTGGGCGCGGACTTGCAGCTCTTGGTGAAGGA
GGCGGCTCTGCAGGCGCTTCGGAGGACTCGGGGCGGCGGTGATTGGGGAA
GTCTTTCTGCGAGGGCTGGCTGTAGTGACGCCGGCGTCGAGGAGGAGGAG
AGTACGAGCGCGGAGGGACTGCCAACGCTGACGGCCGCGGATTTTCGGGC
GGCGTTGCCGTTGGTGGCTCCGAGTGGGCTGAGGGAGGTGGCGGTGGAGG
TCCCGAGCGTGAAGTGGGGGGACATCGGGGGCATGGAGGGCGTCAAGCAG
AGCTTGAGGGAGGTGGTGGAATGGCCGCTCAGGCACCCGGAGGCGTTCTT
GAGGATGGGCATGTCGCCGCCTCGAGGCGTGCTGCTGTACGGCCCCCCAG
GATGCAGCAAGACGCTCATGGCAAGGGCGCTGGCGACGGAATCTGGCATG
AATTTCCTCGCCGTGAAGGGTGGTGGAATGGCCGCTCAGGCACCCGGAGG
CGTTCTTGAGGATGGGCATGTCGCCGCCTCGAGGCGTGCTGCTGTACGGC
CCCCCAGGATGCAGCAAGACGCTCATGGCAAGGGCGCTGGCGACGGAATC
TGGCATGAATTTCCTCGCCGTGAAGGGGCCTGAGCTGCTGAGCAAATGGC
TGGGTGAGTCAGAGCGAGCCATGCAAGCTCTCTTCAAGAGGGCCCGAACG
GCCGCGCCAACGATCATTTTTTTCGACGAAGTGGACGCTCTCGCTTGCAG
GCGAGGAGGCGGCGGGGAAACAGGAGCTGGCGCTACGGAACGCGTGCTGA
CGCAGGGCCTGAGCTGCTGAGCAAATGGCTGGGTGAGTCAGAGCGAGCCA
TGCAAGCTCTCTTCAAGAGGGCCCGAACGGCCGCGCCAACGATCATTTTT
TTCGACGAAGTGGACGCTCTCGCTTGCAGGCGAGGAGGCGGCGGGGAAAC
AGGAGCTGGCGCTACGGAACGCGTGCTGACGCAGCTCCTGACGGAGCTCG
ACGGAATCCAACCGGTGAAGCGCCTGGTCGTTGTGGCGGCAACCAACCGC
CCGGACGTGATCGACCCGGCGTTGCTGCGCCCCGGGCGGTTGGACCGCCT
GGTGTACGTGCCCCCGCCGGACGCGTTGTCCCGTCGGGAGATCCTGCGGC
TGTCTCTGGCCAAGGTGCCCTGTGCGGGCGACGTGGACCACGAGGCGCTA
GCGCGACGAACGGAGGGATTTTCGGGCGCCGAGCTCCTGACGGAGCTCGA
CGGAATCCAACCGGTGAAGCGCCTGGTCGTTGTGGCGGCAACCAACCGCC
CGGACGTGATCGACCCGGCGTTGCTGCGCCCCGGGCGGTTGGACCGCCTG
GTGTACGTGCCCCCGCCGGACGCGTTGTCCCGTCGGGAGATCCTGCGGCT
GTCTCTGGCCAAGGTGCCCTGTGCGGGCGACGTGGACCACGAGGCGCTAG
CGCGACGAACGGAGGGATTTTCGGGCGCCGAGGTAGTGGCTCTTTGCCGG
GAAGCATCCATCTGTGCGCTCGAAGAAGACCGATCAGCTACGCAAGTCCG
CCAAGCGCACCTCCTCGAGGCTTTGGGGCAGATGCGACCGCAGATCACGC
CCGCGGTTCTGGCCTCGTATGCCTCGTTTCAGGGGGGGGTGCGATGAGTA
GTGGCTCTTTGCCGGGAAGCATCCATCTGTGCGCTCGAAGAAGACCGATC
AGCTACGCAAGTCCGCCAAGCGCACCTCCTCGAGGCTTTGGGGCAGATGC
GACCGCAGATCACGCCCGCGGTTCTGGCCTCGTATGCCTCGTTTCAGGGG
GGGGTGCGATGA
back to top