mRNA_E-siliculosus-1a_F_contig13478.2073.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig13478.2073.1
Unique NamemRNA_E-siliculosus-1a_F_contig13478.2073.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: A0A117KI17_9GAMM (Histidine kinase n=43 Tax=root TaxID=1 RepID=A0A117KI17_9GAMM)

HSP 1 Score: 786 bits (2030), Expect = 2.240e-277
Identity = 402/433 (92.84%), Postives = 414/433 (95.61%), Query Frame = 1
Query:    1 IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMIVGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG 1299
            II GWLFYQW+GR+HGLI LGLAAFVGMAQCLPGMLALLYWPGANR GMI+GLVAGVSVWL G WLPLM SLP   LPF PFT A+AP WYNVTLLSL +NILLLIVISLFTRISEGE+SAAEACSVDAVIRSKRFPLEA TASDF AHLAQALG+EAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHD+ PETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALS LSGISGESVIGS RDSLPAPW SLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKA+LSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDT+DPALLETA+QIQQLT+RVTKIVNSLVGFAHG
Sbjct:  392 IISGWLFYQWIGRYHGLIDLGLAAFVGMAQCLPGMLALLYWPGANRNGMIIGLVAGVSVWLWGSWLPLMFSLPTLTLPFTPFTPADAPPWYNVTLLSLTVNILLLIVISLFTRISEGEKSAAEACSVDAVIRSKRFPLEAATASDFPAHLAQALGEEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDNTPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSQLSGISGESVIGSHRDSLPAPWSSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAVLSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTDDPALLETADQIQQLTKRVTKIVNSLVGFAHG 824          
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: UPI00201F14F7 (ATP-binding protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201F14F7)

HSP 1 Score: 757 bits (1954), Expect = 4.420e-266
Identity = 381/433 (87.99%), Postives = 404/433 (93.30%), Query Frame = 1
Query:    1 IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMIVGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG 1299
            I+GGWLF + VGRHH L  LGL+AFVGMAQCLPGMLALLYWPGANRKGM+ GL+ G+ +WL GLWLPL+  +P+P +PF P    +AP WYNVTL+SLA+NI+LLIVISLFTR SEGE+SAAEACSVDAVIRSKR PLEA TA DFS HLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAP TDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALS LSGISGESVIGSRRDSLPAPWP+LLGSVL    TPLYKQAV+LHGKDYFLTLHKA+LSGHDSRGGSVIL+EDH+EMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDT+DPALLETA+QIQQLTQRVTKIVNSLVGFAHG
Sbjct:  377 IVGGWLFAESVGRHHSLTSLGLSAFVGMAQCLPGMLALLYWPGANRKGMVTGLIGGIVMWLWGLWLPLLFDIPMPAMPFTPLMPVDAPPWYNVTLISLAVNIVLLIVISLFTRTSEGERSAAEACSVDAVIRSKRLPLEAATAGDFSTHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPVTDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSQLSGISGESVIGSRRDSLPAPWPTLLGSVLHAPHTPLYKQAVSLHGKDYFLTLHKAVLSGHDSRGGSVILVEDHSEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTDDPALLETADQIQQLTQRVTKIVNSLVGFAHG 809          
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: A0A6F8SS81_9GAMM (Histidine kinase n=39 Tax=Halomonadaceae TaxID=28256 RepID=A0A6F8SS81_9GAMM)

HSP 1 Score: 746 bits (1926), Expect = 7.620e-262
Identity = 378/433 (87.30%), Postives = 399/433 (92.15%), Query Frame = 1
Query:    1 IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMIVGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG 1299
            I GGWLF + VGR+H L  LGLAAFVGMAQCLPG+LALLYWPGANRKGMI GL+ G+ VWL GLWLPL+  + +P LPF     A+AP WYN TL+SLA+NI+LLIV+SLFTRISEGE+SAAEACSVDAVIRSKR PLEA TA DF AHLAQALGDEAASREV RALKALN TPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAP TDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALS LSGISG+SVIGSRRDSLP PWP+LLGSVL  + TPLYKQAVTLHGKDYFLTLHKA+LSGHDSRGGSVIL+EDHTEMKWLE+ELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDT DPALLETA+QIQQLTQRVTKIVNSLVGFAHG
Sbjct:  377 IFGGWLFAESVGRYHSLTSLGLAAFVGMAQCLPGLLALLYWPGANRKGMIAGLIGGIGVWLWGLWLPLLFDITMPALPFTLLMPADAPAWYNATLISLAVNIVLLIVVSLFTRISEGERSAAEACSVDAVIRSKRLPLEAATAGDFPAHLAQALGDEAASREVDRALKALNLTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPVTDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSQLSGISGDSVIGSRRDSLPPPWPTLLGSVLNASQTPLYKQAVTLHGKDYFLTLHKAVLSGHDSRGGSVILVEDHTEMKWLEEELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTEDPALLETADQIQQLTQRVTKIVNSLVGFAHG 809          
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: A0A2M9T9R2_9GAMM (Histidine kinase n=12 Tax=Halomonas TaxID=2745 RepID=A0A2M9T9R2_9GAMM)

HSP 1 Score: 741 bits (1913), Expect = 7.060e-260
Identity = 372/433 (85.91%), Postives = 402/433 (92.84%), Query Frame = 1
Query:    1 IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMIVGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG 1299
            I GGWLF + +GR+H L  LGLAAFVGMAQCLPGMLALLYWPGANRKG + GLV G+ +WL GLWLPL+L+ P+P LPF P  +A+ P W++VTL+SLAINI+LL+V+SLFTR+SEGE S+AEACSVDAVIRSKR PLEA TA DF+AHLAQALG+EAA REV+RALKALN TPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAP TDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALS LSGISG+SVIGSRRDSLPAPWP LLGSVLE   TPLYKQAV+LHGKDYFLTLHKA+LSGHDSRGGSV+L+EDHTEMKWLE+ELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDT DPALLETA+QIQQLTQRVT+IVNSLVGFAHG
Sbjct:  377 IAGGWLFAESLGRYHSLTSLGLAAFVGMAQCLPGMLALLYWPGANRKGTLAGLVGGIVIWLWGLWLPLLLNTPLPALPFTPLMSADDPAWFSVTLISLAINIVLLMVVSLFTRMSEGESSSAEACSVDAVIRSKRLPLEAATAGDFTAHLAQALGEEAAGREVSRALKALNLTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPVTDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSQLSGISGDSVIGSRRDSLPAPWPELLGSVLEADQTPLYKQAVSLHGKDYFLTLHKAVLSGHDSRGGSVVLVEDHTEMKWLEEELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTEDPALLETADQIQQLTQRVTRIVNSLVGFAHG 809          
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: A0A1R4I0P0_9GAMM (Histidine kinase n=12 Tax=Halomonas TaxID=2745 RepID=A0A1R4I0P0_9GAMM)

HSP 1 Score: 734 bits (1895), Expect = 3.610e-257
Identity = 371/433 (85.68%), Postives = 398/433 (91.92%), Query Frame = 1
Query:    1 IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMIVGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG 1299
            I+ GWLFY+ VGRHH L+ LG+A+FVGMAQCLPGMLALLYWPGANRKGM+VGL+AGV++WL GLWLPL+ + P P LPF    +  AP WY VTL+SLA NI+LLIVISLFTRISEGE+SAAEACSVDAVIRSKR PLEA TA+DFS HLAQA+GDEAA REV+RALKAL  TPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAP TDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCV GDD ELLMWNQALS LSGISGESVIG+R D+LPAPWP LLG+VL  + TPLYKQAV+LHGKDYFLTLHKA LSGHDSRGGSV+L+EDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETA+QIQQLT+RVT IVNSLVGFAHG
Sbjct:  376 IVSGWLFYEGVGRHHDLVNLGMASFVGMAQCLPGMLALLYWPGANRKGMVVGLIAGVTLWLWGLWLPLIFTFPTPALPFTHLMSDSAPPWYTVTLVSLATNIVLLIVISLFTRISEGEKSAAEACSVDAVIRSKRLPLEAATAADFSTHLAQAIGDEAAQREVSRALKALKLTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPVTDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVFGDDKELLMWNQALSQLSGISGESVIGARCDNLPAPWPELLGNVLLASHTPLYKQAVSLHGKDYFLTLHKAELSGHDSRGGSVVLVEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETADQIQQLTRRVTTIVNSLVGFAHG 808          
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: A0A0P7XY48_9GAMM (Histidine kinase n=10 Tax=Halomonas TaxID=2745 RepID=A0A0P7XY48_9GAMM)

HSP 1 Score: 734 bits (1895), Expect = 3.850e-257
Identity = 372/432 (86.11%), Postives = 395/432 (91.44%), Query Frame = 1
Query:    1 IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMIVGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAH 1296
            I+GGWLFYQWVGRH+ L  LGLAAFVGMAQCLPGMLALLYWPGANRKGM+ GL+ G++VWL  LWLPL+     P LP  P T A+AP+WY+VTLLSL+ NILLLIV+SLFTR S+GE+SAAEACSVDAVIRSKR PLEA TA+DF  HLAQALGD+AA REV RALKAL+ TPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAP TDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDEL+MWNQALS LSGISGESVIGSRRDSLPAPWP LLGSVL    +PLYKQAV LHGKDY+LTLHKA+LSGHDSRGGSVIL+EDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDT DPALLETA+ IQQLT RVTKIVNSLVGFAH
Sbjct:  378 ILGGWLFYQWVGRHYPLTSLGLAAFVGMAQCLPGMLALLYWPGANRKGMVAGLIGGIAVWLWWLWLPLVAGYTPPALPLTPLTPADAPIWYSVTLLSLSTNILLLIVVSLFTRTSDGERSAAEACSVDAVIRSKRLPLEAATAADFPTHLAQALGDDAAHREVDRALKALHLTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPITDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELVMWNQALSQLSGISGESVIGSRRDSLPAPWPRLLGSVLSEGPSPLYKQAVRLHGKDYYLTLHKAVLSGHDSRGGSVILVEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTEDPALLETADHIQQLTGRVTKIVNSLVGFAH 809          
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: H0J5W1_9GAMM (Histidine kinase n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=H0J5W1_9GAMM)

HSP 1 Score: 727 bits (1876), Expect = 2.790e-254
Identity = 370/433 (85.45%), Postives = 394/433 (90.99%), Query Frame = 1
Query:    1 IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMIVGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG 1299
            I GGWLF + VGR+H L  LGL AFVGMAQCLPGMLALLYWPGANRKGM+ GL+ G+SVWL G+WLPL+  + V  L F      ++P WYNVTL SLA+NILLLI++SLFTR SEGE+SAAEACSVDAVIRSKR PLEA TA DF+AHLAQA+GDEAA REV RALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRH+DAP TDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLA LPVGLCVLGDDDELLMWNQALS LSGISG+SVIGS RDSLPAPWP+LLGSVL  T TPLYKQAV LHG+DYFLTLH+A+LSGHDSRGGSVIL+EDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDT DPALLETA+QIQQLTQRVTKIVNSLVGFAHG
Sbjct:  377 IFGGWLFAESVGRYHSLTNLGLTAFVGMAQCLPGMLALLYWPGANRKGMVAGLIGGISVWLAGVWLPLLFDISVTTLFFMHSLPTDSPHWYNVTLTSLAVNILLLILVSLFTRTSEGERSAAEACSVDAVIRSKRLPLEAATAGDFTAHLAQAVGDEAAEREVERALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHNDAPLTDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAKLPVGLCVLGDDDELLMWNQALSKLSGISGDSVIGSHRDSLPAPWPTLLGSVLSATHTPLYKQAVALHGRDYFLTLHQAVLSGHDSRGGSVILVEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTEDPALLETADQIQQLTQRVTKIVNSLVGFAHG 809          
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: A0A7X4JYY7_9GAMM (Histidine kinase n=3 Tax=Halomonas TaxID=2745 RepID=A0A7X4JYY7_9GAMM)

HSP 1 Score: 702 bits (1811), Expect = 1.990e-244
Identity = 359/433 (82.91%), Postives = 384/433 (88.68%), Query Frame = 1
Query:    1 IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMIVGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG 1299
            II GWLFY  VGRH  L  LGLAAFVGMAQCLPGMLALLYWPGANR GMI GL+AGV +WL GLWLPL +++PVP LPF P    E+P+WY VTLLSLA NI+LLI +SLF+R SEGE+SA+EACSVDAVIRSKR PLEA T  DF+ HLAQALGDEAA REV RALKAL+   QERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAP TDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTL +LPVGLCV GDD ELLMWNQAL+ LSGISG+SVIGSRRDSLP PWP+LLG  LE+ + PLYKQ   LHG+DYFLTLHKA LSGHDSRGGSV+LIEDH+EMK LEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDT+DPALLETA+ IQ LTQRVTKIVNSLVGFAHG
Sbjct:  379 IISGWLFYTGVGRHQALTPLGLAAFVGMAQCLPGMLALLYWPGANRNGMIAGLLAGVFIWLWGLWLPLFVAIPVPTLPFTPLIPPESPLWYQVTLLSLAANIVLLITVSLFSRTSEGEKSASEACSVDAVIRSKRLPLEAATVEDFTTHLAQALGDEAARREVDRALKALHINHQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPVTDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLTHLPVGLCVFGDDSELLMWNQALAELSGISGDSVIGSRRDSLPEPWPTLLGRALESDNAPLYKQPAHLHGRDYFLTLHKADLSGHDSRGGSVVLIEDHSEMKRLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTDDPALLETADHIQTLTQRVTKIVNSLVGFAHG 811          
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: A0A368U2V4_9GAMM (Histidine kinase n=2 Tax=Halomonas TaxID=2745 RepID=A0A368U2V4_9GAMM)

HSP 1 Score: 697 bits (1799), Expect = 1.290e-242
Identity = 352/433 (81.29%), Postives = 381/433 (87.99%), Query Frame = 1
Query:    1 IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMIVGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG 1299
            I GGWLFY+ VG H+ L  LGLAAFVGMAQCLPGMLALLYWPGANRKGM+ GL+ GV +WL GLWLPL+    +P  P  P   A+AP+WY+VTLL+L +NI+ LI++SLFTR S GE+SAAEACSVDAVIRSKR PL+A TA DF  HLAQALGDEAA REV RALK L     ERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDD P TDDIHFVESRLEAYRSRLTGLARELDGLRRHHR+TLAYLP+GLCV GDD+ELLMWNQAL+ LS I G+SVIG+RRDSLPAPWP+LLG  L    TPLYKQAVTLHGK YFLTLHKA+LS HDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDT+DPALLETA+QIQQLT+RVT+IVNSLVGFAHG
Sbjct:  379 IFGGWLFYRTVGMHNDLTTLGLAAFVGMAQCLPGMLALLYWPGANRKGMVSGLLIGVMIWLWGLWLPLLFPTVIPAFPLTPLAPADAPLWYHVTLLALGLNIMALIMVSLFTRTSTGEKSAAEACSVDAVIRSKRLPLDAATAEDFPRHLAQALGDEAAQREVTRALKDLGLAVNERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDQPATDDIHFVESRLEAYRSRLTGLARELDGLRRHHRRTLAYLPIGLCVFGDDEELLMWNQALTALSAIEGDSVIGARRDSLPAPWPALLGQALALDHTPLYKQAVTLHGKTYFLTLHKAVLSDHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTDDPALLETADQIQQLTRRVTRIVNSLVGFAHG 811          
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Match: A0A3T1DHI5_9GAMM (HisKA domain-containing protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DHI5_9GAMM)

HSP 1 Score: 662 bits (1709), Expect = 1.100e-237
Identity = 344/372 (92.47%), Postives = 351/372 (94.35%), Query Frame = 1
Query:  184 LGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAINILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHLAQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAPWPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG 1299
            +GLWLPLM SLPVP LP  P T   APVWYNVTLLSLA+NILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEA TASDFS HLA ALGDEAASREV RAL+ALN TPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDD PETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALS LSGISGESVIGSRRDSLPAPWP LLGS L+ T  PLYKQAV LHG+DYFLTLHKAILSG+DSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETA+QIQQLTQRVTKIVNSLVGFAHG
Sbjct:    3 MGLWLPLMFSLPVPTLPMTPLTDTGAPVWYNVTLLSLAVNILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEAATASDFSTHLAHALGDEAASREVNRALQALNLTPQERRPYALRRLRDRIQANLSGLMGPSVARDIVDRYLPYRHDDTPETDDIHFVESRLEAYRSRLTGLARELDGLRRHHRQTLAYLPVGLCVLGDDDELLMWNQALSQLSGISGESVIGSRRDSLPAPWPRLLGSALDATPGPLYKQAVALHGRDYFLTLHKAILSGNDSRGGSVILIEDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYDTNDPALLETADQIQQLTQRVTKIVNSLVGFAHG 374          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13478.2073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A117KI17_9GAMM2.240e-27792.84Histidine kinase n=43 Tax=root TaxID=1 RepID=A0A11... [more]
UPI00201F14F74.420e-26687.99ATP-binding protein n=1 Tax=Halomonas olivaria Tax... [more]
A0A6F8SS81_9GAMM7.620e-26287.30Histidine kinase n=39 Tax=Halomonadaceae TaxID=282... [more]
A0A2M9T9R2_9GAMM7.060e-26085.91Histidine kinase n=12 Tax=Halomonas TaxID=2745 Rep... [more]
A0A1R4I0P0_9GAMM3.610e-25785.68Histidine kinase n=12 Tax=Halomonas TaxID=2745 Rep... [more]
A0A0P7XY48_9GAMM3.850e-25786.11Histidine kinase n=10 Tax=Halomonas TaxID=2745 Rep... [more]
H0J5W1_9GAMM2.790e-25485.45Histidine kinase n=2 Tax=unclassified Halomonas Ta... [more]
A0A7X4JYY7_9GAMM1.990e-24482.91Histidine kinase n=3 Tax=Halomonas TaxID=2745 RepI... [more]
A0A368U2V4_9GAMM1.290e-24281.29Histidine kinase n=2 Tax=Halomonas TaxID=2745 RepI... [more]
A0A3T1DHI5_9GAMM1.100e-23792.47HisKA domain-containing protein n=1 Tax=Halomonas ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13478contigE-siliculosus-1a_F_contig13478:3..1301 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1299
Model size1299
Exons1
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.T
EggNOG OGs1QTSW@1224,1T1G2@1236,1XHSP@135619,COG0591@1,COG0591@2,COG4191@1,COG4191@2
EggNOG free text desc.Histidine kinase
Preferred namecbrA
Seed eggNOG ortholog1415755.JQLV01000001_gene4332
Seed ortholog evalue2.8e-230
Seed ortholog score804.3
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927862.4992027-CDS-E-siliculosus-1a_F_contig13478:2..13011622927862.4992027-CDS-E-siliculosus-1a_F_contig13478:2..1301Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13478 3..1301 +
1696318713.5317895-CDS-E-siliculosus-1a_F_contig13478:2..13011696318713.5317895-CDS-E-siliculosus-1a_F_contig13478:2..1301Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13478 3..1301 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13478.2073.1prot_E-siliculosus-1a_F_contig13478.2073.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig13478 3..1301 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig13478.2073.1

>prot_E-siliculosus-1a_F_contig13478.2073.1 ID=prot_E-siliculosus-1a_F_contig13478.2073.1|Name=mRNA_E-siliculosus-1a_F_contig13478.2073.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=433bp
IIGGWLFYQWVGRHHGLIGLGLAAFVGMAQCLPGMLALLYWPGANRKGMI
VGLVAGVSVWLLGLWLPLMLSLPVPQLPFAPFTAAEAPVWYNVTLLSLAI
NILLLIVISLFTRISEGEQSAAEACSVDAVIRSKRFPLEATTASDFSAHL
AQALGDEAASREVARALKALNFTPQERRPYALRRLRDRIQANLSGLMGPS
VARDIVDRYLPYRHDDAPETDDIHFVESRLEAYRSRLTGLARELDGLRRH
HRQTLAYLPVGLCVLGDDDELLMWNQALSLLSGISGESVIGSRRDSLPAP
WPSLLGSVLETTSTPLYKQAVTLHGKDYFLTLHKAILSGHDSRGGSVILI
EDHTEMKWLEDELVHAARLASIGQLAAGVAHEIGNPITGISSLAQNLRYD
TNDPALLETAEQIQQLTQRVTKIVNSLVGFAHG
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mRNA from alignment at E-siliculosus-1a_F_contig13478:3..1301+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig13478.2073.1 ID=mRNA_E-siliculosus-1a_F_contig13478.2073.1|Name=mRNA_E-siliculosus-1a_F_contig13478.2073.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1299bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13478:3..1301+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATTATCGGTGGCTGGTTATTTTACCAATGGGTAGGTCGCCATCATGGCTT AATCGGCCTTGGGTTGGCCGCGTTTGTGGGCATGGCTCAGTGCCTACCAG GCATGCTAGCGCTGCTCTACTGGCCGGGTGCAAACCGTAAGGGAATGATT GTTGGCTTAGTTGCGGGGGTCAGTGTGTGGCTGTTGGGCTTATGGCTACC ATTGATGCTCTCGCTACCCGTGCCGCAACTACCCTTTGCCCCGTTTACCG CCGCGGAGGCACCTGTTTGGTACAACGTGACGCTACTATCGTTAGCGATC AATATCCTGCTGCTGATTGTGATATCGCTATTTACGCGTATTTCAGAAGG AGAACAGTCCGCCGCAGAAGCGTGCTCGGTAGATGCCGTTATCCGCTCTA AGCGCTTTCCGCTAGAAGCCACTACTGCGAGCGACTTCTCTGCACACTTA GCCCAGGCGCTCGGCGATGAAGCGGCCAGCCGTGAAGTCGCCCGCGCGTT GAAAGCGCTTAATTTCACGCCTCAGGAGCGCCGCCCCTACGCTCTTCGCC GCCTGCGTGACCGTATCCAGGCAAATTTGTCAGGTTTGATGGGGCCTTCA GTGGCGCGGGACATCGTTGATCGCTACCTGCCCTACCGCCACGACGACGC CCCGGAAACCGACGATATTCACTTTGTCGAGAGCCGCTTGGAAGCTTACC GCTCGCGGCTGACAGGGTTAGCCCGCGAACTCGATGGTTTACGCCGCCAC CACCGCCAAACCCTGGCGTATTTACCCGTAGGGCTATGCGTATTGGGTGA TGACGATGAGCTCTTGATGTGGAATCAGGCGCTCTCCCTGCTCTCAGGCA TCAGTGGTGAAAGTGTGATTGGGTCGCGCCGCGATAGCCTTCCAGCCCCC TGGCCAAGTTTGCTGGGCAGCGTGCTAGAGACAACGTCAACACCGCTCTA CAAACAGGCCGTCACGCTACACGGCAAGGACTATTTCCTTACGCTGCACA AAGCCATTCTCAGCGGCCACGACAGCCGGGGGGGTAGCGTCATTTTGATT GAAGACCATACCGAGATGAAGTGGCTAGAAGATGAGCTGGTGCATGCCGC CCGCCTAGCCTCAATTGGTCAATTAGCCGCTGGCGTCGCCCACGAAATCG GCAACCCGATTACCGGTATCTCTTCGCTAGCGCAAAATCTACGCTACGAT ACCAACGACCCCGCGCTGCTGGAAACCGCCGAGCAAATTCAGCAGTTGAC GCAGCGCGTAACTAAAATCGTCAACTCGCTGGTCGGTTTTGCCCATGGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13478:3..1301+

>mRNA_E-siliculosus-1a_F_contig13478.2073.1 ID=mRNA_E-siliculosus-1a_F_contig13478.2073.1|Name=mRNA_E-siliculosus-1a_F_contig13478.2073.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2598bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13478:3..1301+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATTATCGGTGGCTGGTTATTTTACCAATGGGTAGGTCGCCATCATGGCTT
AATCGGCCTTGGGTTGGCCGCGTTTGTGGGCATGGCTCAGTGCCTACCAG
GCATGCTAGCGCTGCTCTACTGGCCGGGTGCAAACCGTAAGGGAATGATT
GTTGGCTTAGTTGCGGGGGTCAGTGTGTGGCTGTTGGGCTTATGGCTACC
ATTGATGCTCTCGCTACCCGTGCCGCAACTACCCTTTGCCCCGTTTACCG
CCGCGGAGGCACCTGTTTGGTACAACGTGACGCTACTATCGTTAGCGATC
AATATCCTGCTGCTGATTGTGATATCGCTATTTACGCGTATTTCAGAAGG
AGAACAGTCCGCCGCAGAAGCGTGCTCGGTAGATGCCGTTATCCGCTCTA
AGCGCTTTCCGCTAGAAGCCACTACTGCGAGCGACTTCTCTGCACACTTA
GCCCAGGCGCTCGGCGATGAAGCGGCCAGCCGTGAAGTCGCCCGCGCGTT
GAAAGCGCTTAATTTCACGCCTCAGGAGCGCCGCCCCTACGCTCTTCGCC
GCCTGCGTGACCGTATCCAGGCAAATTTGTCAGGTTTGATGGGGCCTTCA
GTGGCGCGGGACATCGTTGATCGCTACCTGCCCTACCGCCACGACGACGC
CCCGGAAACCGACGATATTCACTTTGTCGAGAGCCGCTTGGAAGCTTACC
GCTCGCGGCTGACAGGGTTAGCCCGCGAACTCGATGGTTTACGCCGCCAC
CACCGCCAAACCCTGGCGTATTTACCCGTAGGGCTATGCGTATTGGGTGA
TGACGATGAGCTCTTGATGTGGAATCAGGCGCTCTCCCTGCTCTCAGGCA
TCAGTGGTGAAAGTGTGATTGGGTCGCGCCGCGATAGCCTTCCAGCCCCC
TGGCCAAGTTTGCTGGGCAGCGTGCTAGAGACAACGTCAACACCGCTCTA
CAAACAGGCCGTCACGCTACACGGCAAGGACTATTTCCTTACGCTGCACA
AAGCCATTCTCAGCGGCCACGACAGCCGGGGGGGTAGCGTCATTTTGATT
GAAGACCATACCGAGATGAAGTGGCTAGAAGATGAGCTGGTGCATGCCGC
CCGCCTAGCCTCAATTGGTCAATTAGCCGCTGGCGTCGCCCACGAAATCG
GCAACCCGATTACCGGTATCTCTTCGCTAGCGCAAAATCTACGCTACGAT
ACCAACGACCCCGCGCTGCTGGAAACCGCCGAGCAAATTCAGCAGTTGAC
GCAGCGCGTAACTAAAATCGTCAACTCGCTGGTCGGTTTTGCCCATGGAA
TTATCGGTGGCTGGTTATTTTACCAATGGGTAGGTCGCCATCATGGCTTA
ATCGGCCTTGGGTTGGCCGCGTTTGTGGGCATGGCTCAGTGCCTACCAGG
CATGCTAGCGCTGCTCTACTGGCCGGGTGCAAACCGTAAGGGAATGATTG
TTGGCTTAGTTGCGGGGGTCAGTGTGTGGCTGTTGGGCTTATGGCTACCA
TTGATGCTCTCGCTACCCGTGCCGCAACTACCCTTTGCCCCGTTTACCGC
CGCGGAGGCACCTGTTTGGTACAACGTGACGCTACTATCGTTAGCGATCA
ATATCCTGCTGCTGATTGTGATATCGCTATTTACGCGTATTTCAGAAGGA
GAACAGTCCGCCGCAGAAGCGTGCTCGGTAGATGCCGTTATCCGCTCTAA
GCGCTTTCCGCTAGAAGCCACTACTGCGAGCGACTTCTCTGCACACTTAG
CCCAGGCGCTCGGCGATGAAGCGGCCAGCCGTGAAGTCGCCCGCGCGTTG
AAAGCGCTTAATTTCACGCCTCAGGAGCGCCGCCCCTACGCTCTTCGCCG
CCTGCGTGACCGTATCCAGGCAAATTTGTCAGGTTTGATGGGGCCTTCAG
TGGCGCGGGACATCGTTGATCGCTACCTGCCCTACCGCCACGACGACGCC
CCGGAAACCGACGATATTCACTTTGTCGAGAGCCGCTTGGAAGCTTACCG
CTCGCGGCTGACAGGGTTAGCCCGCGAACTCGATGGTTTACGCCGCCACC
ACCGCCAAACCCTGGCGTATTTACCCGTAGGGCTATGCGTATTGGGTGAT
GACGATGAGCTCTTGATGTGGAATCAGGCGCTCTCCCTGCTCTCAGGCAT
CAGTGGTGAAAGTGTGATTGGGTCGCGCCGCGATAGCCTTCCAGCCCCCT
GGCCAAGTTTGCTGGGCAGCGTGCTAGAGACAACGTCAACACCGCTCTAC
AAACAGGCCGTCACGCTACACGGCAAGGACTATTTCCTTACGCTGCACAA
AGCCATTCTCAGCGGCCACGACAGCCGGGGGGGTAGCGTCATTTTGATTG
AAGACCATACCGAGATGAAGTGGCTAGAAGATGAGCTGGTGCATGCCGCC
CGCCTAGCCTCAATTGGTCAATTAGCCGCTGGCGTCGCCCACGAAATCGG
CAACCCGATTACCGGTATCTCTTCGCTAGCGCAAAATCTACGCTACGATA
CCAACGACCCCGCGCTGCTGGAAACCGCCGAGCAAATTCAGCAGTTGACG
CAGCGCGTAACTAAAATCGTCAACTCGCTGGTCGGTTTTGCCCATGGA
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