mRNA_E-siliculosus-1a_F_contig1346.2066.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI) HSP 1 Score: 833 bits (2153), Expect = 7.530e-303 Identity = 394/405 (97.28%), Postives = 398/405 (98.27%), Query Frame = 1
Query: 109 MMRMVGHGSALSVALLAIWSMGAIPRYQARLDGTETGKRARERELGDDEDAIAFNKHDCPYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDGNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRCI 1323
MM VGHG ALSVALLA WSMGAIPRYQARLDGTETGKRARERELGDDEDAIAFNKHDC YAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCP DIIWENRGAMQMAGL+NPER+KYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGD NPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRID+VTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQS+LCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRCI
Sbjct: 1 MMGTVGHGFALSVALLANWSMGAIPRYQARLDGTETGKRARERELGDDEDAIAFNKHDCTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRCI 405
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE) HSP 1 Score: 377 bits (967), Expect = 3.190e-121 Identity = 192/433 (44.34%), Postives = 239/433 (55.20%), Query Frame = 1
Query: 283 CPYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDGNPPGGA---------------------------------------------------------------------------------------GNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1320
CPY I A+ A + D ++ GNVVKV HL F RTGN F + +RNLALGYCCK+K VWLPPKDDVLAPG+FN+GTPGPRWFDFSSAPDVDG D C DI W + A M L++PE + P +++C+A+APRLL CEAAYYFP+D+ +C GNLVLHVRSGDIF D+V+ Y GQPPLQFYL ++Q WD +DIVTN Q D +NPV+PAL AM G LPD+V+ HT R+M EDL S+ CAD L LA+S+LV+ +HS A RVY P +CN ++LA +RP+ + YG+ D +G Y VY+ WENTPEQR EML Y+ F +C
Sbjct: 94 CPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNLVLHVRSGDIFSDKVLAYYGQPPLQFYLQVIQHADWDSVDIVTNSQEHDGLNPVIPALQAMVDAGDLPDSVHVHTNRTMEEDLLSMFCADGLALARSTLVSLTGFHSKAKRVYGPHQCNAQFKQLALIRPEVQAYGI--DWAGEYGVYKSWENTPEQREEMLAYDKIVGFNQC 524
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE) HSP 1 Score: 324 bits (831), Expect = 1.050e-100 Identity = 171/395 (43.29%), Postives = 237/395 (60.00%), Query Frame = 1
Query: 283 CPYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAV--CP---------------------RKKKPFLAL-----GDGNPP-------------------GGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNG--QNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1320
CPYAIP+ + AR++ +++ GNVV VT + R GNRF ++ R+L+LGYCCK++ + LPPKD+ LAPG FNEG PGPR FDFSSAPDV+G D CP +I W A + GL + Y P + +C+ + PR+ GCEAAY+FP+D+AV CP R P + L G G G AGNLV+HVRSGDIF R P GQPPLQ+Y+ +QDQ WDR+D+VT+G +NPVVPAL A A G L N++FH R++GEDL+ ++CAD A+S+L + +S+HS+A R+Y+P CN L+ L+ RP T+V+G+ + Y+VY+ W NT +Q EM+ ++V F++C
Sbjct: 147 CPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIFV-RPHPDYGQPPLQYYVRAIQDQEWDRVDVVTDGIVDETHAINPVVPALEAKVAEGELAGNIHFHKNRTIGEDLRYMICADGFVAARSTLRHVVSHHSSAKRMYFPMACNEKLKTLSTERPGTQVFGM-ASWNDQYTVYQRWNNTADQLTEMMTFDVGG-FEQC 538
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI) HSP 1 Score: 317 bits (812), Expect = 3.340e-98 Identity = 174/394 (44.16%), Postives = 224/394 (56.85%), Query Frame = 1
Query: 262 IAFNKHDCPYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGD------GNPPGG--------------------AGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQN--WDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADS-LGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKT------------KVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1320
AFN DCPY + R + D I GNV+ + +FGR GNRF A+ NL LGYCCK+K V LP KDD LAPGIF EGTPGPRW+DF++APDV+G D CP DI W R A + GL+NP Y P++ C+ PRL GCEAAY+FP + VC + A GD GN G A LV+HVRSGDIF D P GQPPLQ+Y+ ++ Q WDR+DIVTNG+ + +NPV+PAL M A G L N+YFH +R+M ED S++C L A+SSL L++HS+A+R+Y+P C L R P KVYG++ YS+ W NT +Q EML +NV++ F++C
Sbjct: 118 FAFNP-DCPYIL-RTPGERLRMRDPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVCLSDR---TATGDVVHEQRGNGASGRSGPGVKKNLVGSEEEEGRPANTLVIHVRSGDIFVDPAAPGYGQPPLQYYVRAIKHQKWDRVDIVTNGRTKKMNVMNPVIPALEVMFAEGELTGNIYFHKDRTMEEDFLSMMCVGGGLVTARSSLSLLLAHHSSASRLYFPRPCAGSLEFYTRGSPDASLNDLDDELQAVKVYGVKPPGMERYSLDVSWNNTADQVNEMLTFNVSS-FEQC 505
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI) HSP 1 Score: 296 bits (759), Expect = 4.380e-90 Identity = 174/424 (41.04%), Postives = 235/424 (55.42%), Query Frame = 1
Query: 205 GTETGKRARERELGDDEDAIAFNKHDCPYAIPNAKVARKQRHD----------STIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAV--CP-------------------RKKKPFLAL-----GDGNPP--------------GGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDN--VNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1320
GT R +R L IA CPYAI +A ++ H+ ++ GNVV VT + R GNRF+++ R+L+LGYCCK++ V LPPKDD LAPG FN+GTPGPR FDFSSAPDV+G D CP +I W A + GL + Y P + C+ + P ++GCEAAY+FP D+AV CP + P + L G G G AGNLV+HVRSGDIF P GQ +Y+ +QDQ WDR+D+VTNG N +NP+VPAL A A G LP N++FH R+M EDL S++CAD A+S+L +S+ S+A R+Y+P CN +L+ L P T+V+G+ Y+V+R W NT +Q AEM+ +V F++C
Sbjct: 125 GTRGEDRGGKRRL-----PIAPFSSSCPYAI----LAEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMCPLDETAEGGNKNVRDISEKPKDDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQ----YYVQAIQDQQWDRVDVVTNGIEDKNHAINPIVPALEAKVAKGQLPGNIHFHKNRTMEEDLLSMICADGFVAARSTLGRVVSHLSSAKRMYFPTSCNEELKNLGTEGPGTQVFGM-ASWDHEYTVFRRWNNTADQIAEMMTADVGG-FEQC 533
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE) HSP 1 Score: 164 bits (414), Expect = 3.310e-41 Identity = 118/391 (30.18%), Postives = 193/391 (49.36%), Query Frame = 1
Query: 283 CPYAIPNAKVARKQRHDSTIEGNVVKVTHLQ-FGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVL----------APGIFN-----EGTPGPRWFDFSSAPDVDGVD--LGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQDIA---VCPRKKKPF---------LALGDGNP--PGGAGNLVLHVRSGDIFFDRVVPYK-GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADSLGLAKSSLVNFLSYHSTANRVYYPWRC---------NH--DLRELARLRPKTKVYGLQL-DRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1320
CP AI + A +R G V+ ++ ++ GR+GN +MA+ ++ +CC+ K + LP D L + +F+ P++ + S D +G+ L CP++ + + A + GL PH++ CM ++ GCEAAY + + CP ++ L G +P GAG+LV+HVRSGDIF + ++ GQPPL +YL ++ +PW+++ VT+G++ D +NP + + + G L NV H +R + EDLQ++LCADSL L+ S+ N L HS A R + PW C NH + + R + +VYG++ S +Y+VY W+ + EM+ + QRC
Sbjct: 48 CPQAI-SPDEADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAPPQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHIRGLH--------PHLQKCMRNV-KMRGCEAAY-LKESLGGEHACPSPQRQLAEREDESAQLVAGTTSPLERRGAGSLVVHVRSGDIFKPGTIYHQYGQPPLLYYLAVIASKPWNKMSFVTSGED-DLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGDTTLNHFANATMICLQRSEVEVYGIEWRTTSEAYTVYDSWDPS-SNLLEMVVSDSVKGMQRC 425
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI) HSP 1 Score: 157 bits (397), Expect = 1.330e-38 Identity = 124/386 (32.12%), Postives = 182/386 (47.15%), Query Frame = 1
Query: 259 AIAFNKHDCPYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEG--TPGPRWFDFSSA-PDVDGVD-LGRCPNDIIWENRGAMQMAGLENPERSKYL-PHIRDCMAKAPRLLGCEAAYYFPQ-DI-AVCPRKKKPFLALGDGNPPG---GAGNLVLHVRSGDIFFDRVVPYK----GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADSLGLAKSSLVNFLSY-HSTANRVYYPWRC-NHDLRELARL---------------RPKTKVYGLQLD-RSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1320
A F CP A+ ++ A N + + GR+GN F+ + LA+G+CC+++ + LP D + PG G G RWFDFS P G + LG P R M+ G +N +++ + CM + L GCE AY D+ CP+++ PG GAG+LV+H+RSGDIF + GQPPLQ+YL ++ ++ WD + +T N +NP L M G L DNV RS+ ED++ +LCAD+L ++SS+ +FL++ HS A + P C N R + R +P +VYG S YSVY+ W +TPEQ EM + Q+C
Sbjct: 81 ANLFQSAGCPQALSRSQ-AEAALDGGNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVC----RPQME-DGADNAFGYEHIHSRLLRCMNRV-YLRGCEKAYLGKMVDLEGFCPKQE-----------PGKRKGAGSLVVHIRSGDIFNPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSM-SFLTFAHSRATTFFVPTPCGNGGFRRMRRPPVKATFDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKC 446
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: A0A6H5JNM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM4_9PHAE) HSP 1 Score: 153 bits (386), Expect = 3.020e-37 Identity = 121/393 (30.79%), Postives = 173/393 (44.02%), Query Frame = 1
Query: 283 CPYAIPNAKVARKQRHDSTIEGNVVKVTHLQ-FGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVD------------------LGRCPNDIIWENRGAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQ--DIAVCPRKKKPFLALGDGNPPG---------------GAGNLVLHVRSGDIFF-DRVVPYKGQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLR---------PKTKVYGLQL-DRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1320
CP AI + + A + D + G V+ VT L+ GR+GN +MA+ +L +CC K + LP D E F FSS DGV+ +G CP I + A + GL + + + H+ + GCEAAY D + CP P DG P G G G+LV+H+RS DIF D GQPPL ++L ++ + WD + ++T+G + +NP + + G L NV H +RS EDLQ++LCADSL L+ S+L N L HS A R + PW C L R + +VYG+ S +Y+VY W+ EM+ + QRC
Sbjct: 54 CPQAISHDE-ALARTSDPSWPGGVLNVTSLETVGRSGNHYMAISTMFSLAFCCGVKVLELPDTDYRFPTEEGGEFKSSKHLFSFSSHG-TDGVEAERQTWSQLTGLEDLQGRVGVCPKKRIVDGTHANHITGL-GKDLQRCIRHVH--------MRGCEAAYLQQVIGDESSCPDSPPPVGT--DGEPTGLVVPGTTGLLPSETKGDGHLVVHIRSQDIFKPDTRYHQYGQPPLGYFLAVIASKKWDYLSVLTSGPD-KQLNPTYSVIAELNRQGFLGTNVEMHKDRSFWEDLQAMLCADSLALSHSTLSNLLLAHSRAKRFFLPWGCEPQPWTLKLNRFVNASMICLQRPEVYGIDWRTTSDAYTVYDSWDPNSNMM-EMVVSDAVKGVQRC 431
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI) HSP 1 Score: 135 bits (341), Expect = 7.140e-32 Identity = 102/329 (31.00%), Postives = 163/329 (49.54%), Query Frame = 1
Query: 424 LGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSA--PDVDGVDLGRCPNDIIWENR-GAMQMAGLENPERSKYLPHIRDCMAKAPRLLGCEAAYYFPQ-DI-AVCPRKKKPFLALGDGNPPG---GAGNLVLHVRSGDIFFDRVVPYK----GQPPLQFYLLLMQDQPWDRIDIVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADSLGLAKSSLVNFLSY-HSTANRVYYPWRC-NHDLRELARLRPK---------------TKVYGLQLDRSGS-YSVYRHWENTPEQRAEMLGYNVTTTFQRC 1320
+G+CC+++ + LP DD L P + T RWFDFS+ P + ++G E + G + G E+ P + +CM + L GCE AY D+ + CP+++ PG GAG+LV H+RSGDIF ++ GQPPLQ+YL ++ + WD + +T +NP L M G L +NV+ R++ D++ +LCAD+L ++SS+ +FL++ HS A + P C N R + + K ++V+G+ ++GS YSVY++W ++P Q EM Y Q+C
Sbjct: 1 MGFCCRSRLLTLPATDDKL-PDELDNFTSARRWFDFSNVTVPWPEYQEMGDDQEVCRPETKDGGRKAFGYEDVH-----PKLLECMNRV-YLRGCEKAYLGKLVDVGSFCPKQE-----------PGKRKGAGSLVAHIRSGDIFNPDGEGHRRQGFGQPPLQYYLRVLAAKDWDNVTFLTAAWEDRALNPTFLTLEMMADAGVLGENVHLFNNRTLLTDMKEMLCADALATSRSSM-SFLTFAHSRATTFFVPTPCGNGGFRRMKDVPVKATFDNTTLLLLEKRESEVFGVDWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKC 310
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Match: A0A835ZFH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFH5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.730e-11 Identity = 72/268 (26.87%), Postives = 109/268 (40.67%), Query Frame = 1
Query: 700 EAAYYFPQDIAVCPRKKKPFLAL--------------GDGNPPGGAGNLVLHVRSGDIFFDRVVPYK--GQPPLQFYLLLMQDQPWDRIDIVTNGQNWD-NVNPV---VPALMAMRATGALPDNVYFHTERSMGEDLQSLLCADSLGLAKSSLVNFLSYHSTANRVYYPWRC------------NHDLR-----------------ELAR-----------------LRPKTKVYGLQLD----RSGSYSVYRHWENTPEQRAEMLGY 1293
+ Y P+ + C R P +A GDG GG +LV+H+RSGDI+ D P+ GQPPL +Y ++ + WD + IVT + + +P+ +PAL+ A + + ++ DL++LLCA L A+SSL L +H+ + Y +HD R EL R +RP+ +Y +D R Y+ Y W NT QR EM+ Y
Sbjct: 170 DTMYRVPEWLEQCVRYSAPCVACERLYVGGMLEDGVCGDGGGGGGKNDLVIHLRSGDIW-DAPAPHPWYGQPPLSWYAAVLNHRDWDAVTIVTERAHDELRAHPLATLLPALLRRPAARVVRASAFWRA------DLRALLCARHLVTAQSSLTALLLWHAPHLQSAYAESAALRDAEQRMELQHHDARAXXXXXXXXXXXXXXXXELRRARKGCSSRYTPLPLLCAVRPEVALYIHDVDAEEERRRPYTPYEEWRNTYAQRLEMMHY 430 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1346.2066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1346.2066.1 >prot_E-siliculosus-1a_F_contig1346.2066.1 ID=prot_E-siliculosus-1a_F_contig1346.2066.1|Name=mRNA_E-siliculosus-1a_F_contig1346.2066.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=406bp MMRMVGHGSALSVALLAIWSMGAIPRYQARLDGTETGKRARERELGDDEDback to top mRNA from alignment at E-siliculosus-1a_F_contig1346:17941..23980+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1346.2066.1 ID=mRNA_E-siliculosus-1a_F_contig1346.2066.1|Name=mRNA_E-siliculosus-1a_F_contig1346.2066.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6040bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1346:17941..23980+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1346:17941..23980+ >mRNA_E-siliculosus-1a_F_contig1346.2066.1 ID=mRNA_E-siliculosus-1a_F_contig1346.2066.1|Name=mRNA_E-siliculosus-1a_F_contig1346.2066.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2436bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1346:17941..23980+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |