mRNA_E-siliculosus-1a_F_contig13458.2064.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 270 bits (689), Expect = 3.640e-84 Identity = 137/149 (91.95%), Postives = 141/149 (94.63%), Query Frame = -1
Query: 1 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAVASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 447
VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAA TD PH PHVLD LEQVKQHLAAVASTGT PRLV+LDDVWEREVVDAFVPLGFKVLLTTRDRSVV VPAGRL++GDMTEEEALELLRK+SG VGQPGDDVR
Sbjct: 255 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVR 403
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 272 bits (696), Expect = 4.120e-82 Identity = 137/149 (91.95%), Postives = 143/149 (95.97%), Query Frame = -1
Query: 1 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAVASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 447
VLASA VRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLA ++GAAPTD PH PHVLD LEQV+QHLAAVASTGTSPRLV+LDDVWEREVVDAFVPLGFKVLLTTRDRSVVG+PAGRL+LGDMTEEEALELLRKTSGTVGQPGDDVR
Sbjct: 309 VLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVR 457
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 265 bits (677), Expect = 2.290e-79 Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = -1
Query: 1 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAVASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 447
VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAR++GAAPTD P P VLDSLEQV+QHLAAV STGTS RLV+LDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRL+LGD+TEEEALELLRKTSG VGQPGDDVR
Sbjct: 292 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVR 440
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 254 bits (649), Expect = 1.370e-75 Identity = 134/150 (89.33%), Postives = 137/150 (91.33%), Query Frame = -1
Query: 1 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAV-ASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 447
VLASAVVRKPSVREHFRGGI WVRVGRGAK+SLL LLQGLAREMG APTD PH P VLDSLEQV+QHLAAV ASTGTSPRLV+LDDVWEREVVDA VPLGFKVLLTTRD SVV VPA RLDLGDMTEEEALELLRKTSGTVGQPGD VR
Sbjct: 266 VLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVR 415
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 249 bits (637), Expect = 5.410e-74 Identity = 129/149 (86.58%), Postives = 136/149 (91.28%), Query Frame = -1
Query: 1 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAVASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 447
VLASAVVR PSVREHFRGGI WVRVGRGAK+SLL LLQGLARE+GAAPTD PH PH LDSLEQV+QHLAAVAST SPRLV+LDDVWEREVVDAFVPLGFK+LLTTRDRS+V PAGRL+LGDMTEEEALELLRKTSGTV PGDDVR
Sbjct: 94 VLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTV-DPGDDVR 241
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 236 bits (601), Expect = 1.620e-72 Identity = 119/149 (79.87%), Postives = 131/149 (87.92%), Query Frame = -1
Query: 1 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAVASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 447
+L SAVVRK +VREHFRGG+FW+RVGR AK+SLL+LLQGLAREM AAPTD PH PHVL+SLEQVKQHLA VAS GTSPRLV+LDDVWEREVVDA + LG KVL+TTRDRSVVGV G L+LGDMTEEEALELL KTS TVGQPG +VR
Sbjct: 50 MLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVR 198
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 243 bits (621), Expect = 4.290e-72 Identity = 123/149 (82.55%), Postives = 132/149 (88.59%), Query Frame = -1
Query: 1 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAVASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 447
VLASAVVRK SVREHFRGGIFW+ VGRGAK LL LLQGL +MGAAPTD PH PHVLDSLEQV++HL AVASTGTSPRLV+LDDVWEREVVDA +PLGFKVL+TTRDRSVVGVP L+LGDMTEEEALELL KTSGTVG+PGD VR
Sbjct: 186 VLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVR 334
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 230 bits (586), Expect = 3.040e-67 Identity = 116/149 (77.85%), Postives = 127/149 (85.23%), Query Frame = -1
Query: 1 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAVASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTVGQPGDDVR 447
VLASA+VRK SV EHFRGGIFW+ +GRGA SLL LQGLAREMGAAPTD PH PHV DSLEQV QHLAAV S G+SPRLV+LDDVWEREVV AF+ +G KVL+TTRDRS+VGVP G L+LGDM E+EALELL KTSGTVGQPGD VR
Sbjct: 286 VLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVR 434
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE) HSP 1 Score: 191 bits (484), Expect = 4.480e-55 Identity = 101/141 (71.63%), Postives = 113/141 (80.14%), Query Frame = -1
Query: 25 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAVASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTSGTV 447
VL SAVVR+ SV E+FRGGIF + VGRGAK+ LL LLQGLAREMGAAP PH P LDSLE V QHL V STGTSPRLV+LDDV EREVV+A +PLG K+++TTRDRSVVGVP G L++GDMTEEEALELL SG V
Sbjct: 8 VLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAV 148
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Match: A0A6H5KQU6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU6_9PHAE) HSP 1 Score: 184 bits (466), Expect = 1.250e-51 Identity = 99/138 (71.74%), Postives = 110/138 (79.71%), Query Frame = -1
Query: 34 VLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAAPTDVPHMAPHVLDSLEQVKQHLAAVASTGTSPRLVLLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLDLGDMTEEEALELLRKTS 447
VL SAVVR VREHF GGIFW+RVGRGAK+SLL L+Q LAREMGA H P+VLD LEQV QH+AAVASTGTSPRLV+LDDVWEREVVDA + L KVL+TTRD SVVGVP RL+ DM E+EA+ELL KTS
Sbjct: 142 VLVSAVVRHLRVREHFHGGIFWMRVGRGAKTSLLPLMQTLAREMGA------HGVPYVLDGLEQVGQHVAAVASTGTSPRLVVLDDVWEREVVDALLRLKLKVLVTTRDHSVVGVPGTRLEPEDMAEDEAMELLLKTS 273 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13458.2064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig13458.2064.1 >prot_E-siliculosus-1a_F_contig13458.2064.1 ID=prot_E-siliculosus-1a_F_contig13458.2064.1|Name=mRNA_E-siliculosus-1a_F_contig13458.2064.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=149bp PDIVSRLTHSPARLPEQLQRLFLRHVSQIQASGRHTNDRPVTRGQQHLKSback to top mRNA from alignment at E-siliculosus-1a_F_contig13458:566..1014+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig13458.2064.1 ID=mRNA_E-siliculosus-1a_F_contig13458.2064.1|Name=mRNA_E-siliculosus-1a_F_contig13458.2064.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=449bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13458:566..1014+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13458:566..1014+ >mRNA_E-siliculosus-1a_F_contig13458.2064.1 ID=mRNA_E-siliculosus-1a_F_contig13458.2064.1|Name=mRNA_E-siliculosus-1a_F_contig13458.2064.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=894bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13458:566..1014+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |