mRNA_E-siliculosus-1a_F_contig1345.2061.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: D8LI40_ECTSI (A to I editase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI40_ECTSI) HSP 1 Score: 1153 bits (2983), Expect = 0.000e+0 Identity = 634/784 (80.87%), Postives = 651/784 (83.04%), Query Frame = 1
Query: 1 MLLGDRVASAVVEQFDNLKPRGKPQGKEWTVLAGIVAQDTRTECCTPVAGANSSSCSCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQDVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQAADAGTCASWRLKPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGDDRGDAKRARCAVATAGLSDAVAPSPRPGLPLDEERSCSAASLNPLDCKPREPEVRVGEKISGQGQNMGAETMTFTGAKIIAAVKERGAPDRSFSAYRNGEGVKAATADLVLRIDREQEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWTFLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGRAALANRRSSCDGTTGTVGGEEHLSRPPMPREEDEERMAVFVSEVTFARSKAQSEQRVFDDEGAPCSSTSGVGSPGSIPPAKATVSSVEASPSVDDASVAAGPAGQRMPGHDERNGRETSQGTRSDNSN-GKRSRRDRKPKKVVPSGTSLNWIEGLGTGRGTGPGGGDAARIQAEVTLSATGRMQGAVSKGVLTLRTRSRLCRARLLEAASLVARAYLPQRAPMCDHHNSEIEGTGEEADKVQAG-----NEGPESGGRSYWRLKQASRAYRVRREAMLSTPTFRAWLVGGKDKQRFAVDERTGVVPLAKAPASQPPPTRS 2334
MLLGDRVASAVVEQFDNLK RGKPQGKEWTVLAGIVAQDTRTECCT VAGANSS CSCLRV+SLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSS AGRQQDVT+ ERKGGG P NS RS+GRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQA DAG C SWRLKPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGS+RC GR DRGDAKRARCAVA AGLSDAVAPSPRP LPLDEERSCSAASLNPLDCKPREPE EQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKW FLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGRAALANRRSS DGTTGTVGGEEHLS PPMPREE+EERMAVFVSEVTFARSKAQSEQRVFDDEG+ CSSTSGVGSPGSI PAKATVSSV+ASPS+ DAS+AAG A QRMPG ++R+GRETSQGTRSDNS GKRSRRDRKPKKVVPSGTSLNWIEGLGTGRGTGPGGGD ARIQAEVTLSATGRMQGAVSKGVLTLRTRSRLCRARLLEAA+LVARAYLPQRAPMCDHH S+IEGTGEE + VQAG +EGPESGGRSYWRLKQASRAYRVRREAMLSTPTFRAWLVGGKDKQRFAVDERTGVV LAKAPAS+PPPTRS
Sbjct: 1 MLLGDRVASAVVEQFDNLKSRGKPQGKEWTVLAGIVAQDTRTECCTAVAGANSSPCSCLRVISLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSAAGRQQDVTIDERKGGGTPCNSGRSDGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQATDAGACISWRLKPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSARCGGGDGDPGNDSSWDDAPRSTPLAGSRSDGERRGRGDADRGDAKRARCAVAIAGLSDAVAPSPRPDLPLDEERSCSAASLNPLDCKPREPE----------------------------------------------------------------EQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWAFLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGRAALANRRSSFDGTTGTVGGEEHLSHPPMPREEEEERMAVFVSEVTFARSKAQSEQRVFDDEGS-CSSTSGVGSPGSITPAKATVSSVKASPSIADASIAAGSARQRMPGDNDRSGRETSQGTRSDNSIIGKRSRRDRKPKKVVPSGTSLNWIEGLGTGRGTGPGGGDTARIQAEVTLSATGRMQGAVSKGVLTLRTRSRLCRARLLEAANLVARAYLPQRAPMCDHHYSDIEGTGEETETVQAGEGASGSEGPESGGRSYWRLKQASRAYRVRREAMLSTPTFRAWLVGGKDKQRFAVDERTGVVLLAKAPASRPPPTRS 719
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: A0A6U5GYH6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5GYH6_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.760e-29 Identity = 138/468 (29.49%), Postives = 206/468 (44.02%), Query Frame = 1
Query: 7 LGDRVASAVVEQFDN-------LKPRGKPQ-GKEWTVLAGIVAQDTRTECCTPVAGANSSSCSCLRVVSLATGNKCVGRDKIPDD-----GSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQDVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGR---ILLLERSPQAA-----DAGTCASWRLKPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGDDRGDAKRARCAVATAGLSDAVAPSPRPGLPLDEERSCSAASLNPLDCKPREPEVRVGEKISGQGQNMGAETMTFTGAKIIAAVKERGAPDRSFSAYRNGEGV-KAATADLVLRIDREQEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWTFLGVQGGLLASWVE-PIFLSSIVISADPRT 1341
L DR+A + +++ RGKPQ GKEWTV A IV D P A ++ S + VVS ATG+KC G +I D+ G+V+HDSHAEVL RR L+L LW+E+ +++ +++ +G+ D + + T S+ G ++ G+ +L + SP + G + L+P + LHLYISD+PCGDASIY+ ++ G D+R + K+ A + SP G+ ++ ++N + + VG +N+ K+ K G+ + NGE V K + +L L RE Q V ALR KS RSN+ E R++SMSCSDKL +W+ LG+QGGLL+ W+ PI SI++ DPRT
Sbjct: 4 LSDRIAQCALRHYESGMYDSKCKSNRGKPQSGKEWTVFAAIVVLDESEGSRDPEA--KTTGYSDMWVVSCATGSKCTGLSRIGDNLNVCGGTVLHDSHAEVLCRRGLVLTLWKEVEEKLN------REIRIGK----------DWKKEKETYDST---------------GNFFLEKNCGKKRELLETDCSPARSKLENDQLGPSFQFSLRPELSLHLYISDSPCGDASIYKVGTESVENESSGYMGNPERHTESRALMKLDDENDGVNLLKRKLDEN------DERVERKKNLANFTGA----KIVLSPATGI--------TSENINITEEIHMSSKTNVGITSCDSSRNISP--------KVNVDKKLHGSTPYEDAYISNGEKVTKKSFCNLTLA--REDTQIVSALRTKSGRSNLPEHLRSVSMSCSDKLCRWSLLGLQGGLLSRWIPFPITFKSILVGRDPRT 410
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: A0A835ZEK1_9STRA (A to I editase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK1_9STRA) HSP 1 Score: 134 bits (337), Expect = 8.030e-29 Identity = 150/429 (34.97%), Postives = 186/429 (43.36%), Query Frame = 1
Query: 142 VAGANSSSCSC-LRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQDVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQAADAGTCASWRLKPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGDDRGDAKRARCAVATAGLSD-AVAPSPR--------PGLPLDEERSCSAASLNPLDCKPREPEVRVGEKISGQGQNMGAETMTFTGAKIIAAVKERGAPDRSFSAYRNGEGVKAATADLVLRIDREQEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWTFLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGRAA 1398
VA A +SS L V++LATG KC+G+ K+P DGS+VHDSHAEVLARR L+ RL E HLR + T R G G DD R L G +RL+ RLHLYIS+ PCGDASIY + +P ++R XXXXXXXXXXXXXXX + P+P P PL + A P KP+ G+ G G TM T +G A+ G A T L ++RE Q VG LR+KS RS++ E RT SMSCSDKLA+W LG+QG LL W+EP+ LSS+ +SAD R P +A+ RAI RAA
Sbjct: 7 VAAAQTSSADAPLAVIALATGTKCMGQSKLPPDGSIVHDSHAEVLARRCLV-RLLGE-HLRAALT-----------RAG---------------------------------------GSDDSRNFL-------ESTGVEGRFRLRRGHRLHLYISEPPCGDASIYPRVADSPPAAVEAAARADTATAEAALDATQLPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMVPAPAAASHSVNSPTCPLKRANNSGAGDA-PHAKKPK----LNGDSTEGSGLPSDGATMAVTAENGDVVAGGQGGS----GAHAAGAVAMAYTGAKALTLEREVRQAVGQLRLKSGRSDLRPEDRTESMSCSDKLARWAVLGLQGRLLRRWLEPVLLSSVTVSADARA-APDAQRAAMRRAICDRAA 366
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: A0A7S4PFY0_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PFY0_GUITH) HSP 1 Score: 114 bits (286), Expect = 1.610e-23 Identity = 120/447 (26.85%), Postives = 166/447 (37.14%), Query Frame = 1
Query: 7 LGDRVASAVVEQFDNLKPRGKPQGKEWTVLAGIVAQDTRTECCTPVAGANSSSCSCL-------RVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQDVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQAADAGTCASWRLKPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGDDRGDAKRARCAVATAGLSDAVAPSPRPGLPLDEERSCSAASLNPLDCKPREPEVRVGEKISGQGQNMGAETMTFTGAKIIAAVKERGAPDRSFSAYRNGEGVKAATADLVLRIDREQEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWTFLGVQGGLLASWVEPIFLSSIVIS 1326
LGD ++ V+E + L GKP EWT+LAGIVA TR +C S S L R++SLATGNKC+G K+ DG V++DSHAEVLARRA + L+ ++ L + EDD + LL+RS + D G + RLK +LHLY+S APCGDAS +E +A GGGG AP+ R + DE R+ V + + ++ TGAK I A GE + L IK R + RT S+SCSDK+A+W LG+QG LLA ++P++L ++++S
Sbjct: 20 LGDLISQLVIETYKTLPKSGKPNAGEWTILAGIVA--TRVKCKASHEDHAPSPHSSLDPSELEFRLLSLATGNKCLGASKLRGDGRVLNDSHAEVLARRAFMSFLYSQVELFL---------------------------------------------------------EDDRHLCLLDRSSKL-DQGAASRLRLKHACQLHLYVSQAPCGDASNFEIG-EANLEGGGGE-------------------------------------------------------------APAKRIKISTDEHRA-----------------VEISDNVNR------------TGAKTIGN-----------EAAGRGESL---------------------LSIKPGRGD-----RTQSLSCSDKIARWNVLGLQGALLAQLMDPVYLRTVIVS 278
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: K3WR94_GLOUD (A to I editase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WR94_GLOUD) HSP 1 Score: 115 bits (289), Expect = 1.890e-23 Identity = 128/463 (27.65%), Postives = 175/463 (37.80%), Query Frame = 1
Query: 7 LGDRVASAVVEQFD-NLKPRGKPQGKEWTVLAGIVAQDTRTECCTPVAGANSSSCSCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQDVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQAADAGTCASWRLKPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGDDRGDAKRARCAVATAGLSDAVAPSPRPGLPLDEERSCSAASLNPLDCKPREPEVRVGEKISGQGQNMGAETMTFTGAKIIAAVKERGAPDRSFSAYRNGEGVKAATADLVLRIDREQEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWTFLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGR 1392
+ D VA V+ F ++ + K EWTVLAGIVA T E AGA S+ R+++ ATG KC+GR + G VV+D HAE+LARRALL L+ E + TA R++ G++ L ER P T LKP LHLYIS+APCGDA+IY+ RGD + +E N D R I + +T + ++ A +R D + ++ E + ++ +Q VG R+KS RS++ + +T+SMSCSDKLAKW +G+QG LL W EP+FL SIV+S D A AL RAI GR
Sbjct: 5 VADGVADVVLRWFQASVVCQKKHPSTEWTVLAGIVAHSTAGED-PSAAGAESA----FRMLACATGTKCLGRRDLDTRGLVVNDCHAEILARRALLRFLYTEA---LVWTAAREK------------------------------------------------GDEPPSTSLFERHP------TTHRLVLKPQHTLHLYISEAPCGDAAIYQL-----------------------------------------------------RGD--------------------------IIDELVKQRVERN-ADTGERPSTTEAAAAIGAVAE----DTHERSAFRLTGAKAKRKHSDETTASSSPNENAQRPP-------EKRFDQMVGIARVKSGRSDLPPDKQTLSMSCSDKLAKWNAVGIQGTLLLQWYEPLFLRSIVVSRDDTCVSTAAQYEALERAICGR 314
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: L1J7A1_GUITC (A to I editase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7A1_GUITC) HSP 1 Score: 107 bits (268), Expect = 4.400e-23 Identity = 76/218 (34.86%), Postives = 100/218 (45.87%), Query Frame = 1
Query: 7 LGDRVASAVVEQFDNLKPRGKPQGKEWTVLAGIVAQDTRTECCTPVAGANSSSCSCL-------RVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQDVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQAADAGTCASWRLKPYIRLHLYISDAPCGDASIYE 639
LGD ++ V+E + L GKP EWT+LAGIVA TR +C S S L R++SLATGNKC+G K+ DG V++DSHAEVLARRA + L+ ++ L + EDD + LL+RS + D G + RLK +LHLY+S APCGDAS +E
Sbjct: 16 LGDLISQLVIETYKTLPKSGKPNAGEWTILAGIVA--TRVKCKASHEDHAPSPHSSLDPSELEFRLLSLATGNKCLGASKLRGDGRVLNDSHAEVLARRAFMSFLYSQVELFL---------------------------------------------------------EDDRHLCLLDRSSKL-DQGAASRLRLKHACQLHLYVSQAPCGDASNFE 173
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: A0A835YAN4_9CHLO (A to I editase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YAN4_9CHLO) HSP 1 Score: 115 bits (289), Expect = 7.570e-23 Identity = 136/464 (29.31%), Postives = 182/464 (39.22%), Query Frame = 1
Query: 7 LGDRVASAVVEQFDNLKPRGKPQGKEWTVLAGIVAQDTRTECCTPVAGANSSSCSCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQ---DVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQAADAGTCASWRLKPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGDDRGDAKRARCAVATAG-LSDAVAPSPRPGLPLDEERSCSAASLNPLDCKPREPEVRVGEKISGQGQNMGAETMTFTGAKII---------AAVKERGAPDR----SFSAYRNGEGVKAATADLVLRID---REQEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWTFLGVQGGLLASWVE-PIFLSSIVISADP 1335
LG V AV+ F L GKPQ E TVLAG R E A+ S+ S L VVSL TG KC+G K G V+HDSHAE +ARRALL + E L +++ AGR D + G KG P ++ + S+ A+ + P GG +G L P+ RL+P + L +Y+S PCGD SI + G G + RA CA G + A AP G P S +AAS G + G TGAK I A G+PD + +A G GV +D +E + +GA+R K R + T S+SCSDKL++W LG+QG LL+ +E P+ L S+ + A P
Sbjct: 5 LGPAVGDAVLNAFAALPKTGKPQPNEHTVLAGFAL--ARLE----PGAADPSAPSPLLVVSLGTGTKCLGASKRTAQGGVLHDSHAEAVARRALLAWAYGEAELALAAQAGRGDSGCDGSSGPAKGASCPQPEAAAKATTAGSTKAPASVFEVVEAGPTAGGDETRSTEGAGAGLASPPRLR-------LRLRPGLVLLMYVSQPPCGDCSILHTAGEDRGQGQGQQGEALQAAPHG----------------------------------STRACCASGGPGPQACASAPCEPGGAPHVAGHSDAAASAG-------------GVAAASVAPAAGGSVKFRTGAKAIRLMAADGQAGAGASTGSPDALSGPAAAAGAGGAGVLVPVLPQAGDVDVAAQEGGEALGAVRRKPGRGDA-----TPSLSCSDKLSRWCCLGLQGSLLSGILEAPLTLHSLAVGAPP 403
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: A0A329S331_9STRA (A to I editase domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S331_9STRA) HSP 1 Score: 113 bits (283), Expect = 9.840e-23 Identity = 128/481 (26.61%), Postives = 173/481 (35.97%), Query Frame = 1
Query: 7 LGDRVASAVVEQFD-NLKPRGKPQGKEWTVLAGIVAQDTRTECCTPVAGANSSSCSCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQDVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQAADAGTCASWRL--KPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGDDRGDAKRARCAVATAGLSDAVAPSPRPGLPLDEERSCSAASLNPLDCKPREPEVRVGEKISGQGQNMGAETMTFTGAKIIAAVKERGAPDRSFSAYRNGEGVKAATADLVLRIDREQEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWTFLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGR-----AALANRRSSCD 1425
+ VA +V++ F+ N + R K EWTVLAGIV + ++ RV++ ATGNKC+GR + DG VV+D HAEVLARRA L LY L +++G LE S Q+ S RL KP LHL+IS+APCGDA+IYE ++ +DE V+ E +GQ + TGAK + R D+ D +D++ Q VG R+KS RS++ E +T+SMSCSDKLA+W LG+QG LL W EPIFLSSI++S D + AL RA+ R A + R SC+
Sbjct: 6 IASSVARSVLQWFESNSQCRKKIPPSEWTVLAGIVLRSPSLS--------DAGPSDKFRVLTAATGNKCLGRRDLNADGLVVNDCHAEVLARRAFLRY----------------------------------------------------------LYAEALFWQENG----LESSEQSIFERHATSHRLVLKPQHSLHLFISEAPCGDAAIYELRQDI------------------------------------------------------------------------------VDEL-------------------VQQREAKTGQADQRERSELRLTGAKAHNK-RSRDVDDQK---------------DHATPLDKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLARWNALGLQGSLLLQWFEPIFLSSIIVSEDAKAMSVTKQEQALQRAVCARLEERNALVEGERLSCE 303
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: A0A3M6VCX4_9STRA (A to I editase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCX4_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.360e-22 Identity = 125/456 (27.41%), Postives = 167/456 (36.62%), Query Frame = 1
Query: 19 VASAVVEQFD-NLKPRGKPQGKEWTVLAGIVAQDTRTECCTPVAGANSSSCSCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQDVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQAADAGTCASWRLKPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGDDRGDAKRARCAVATAGLSDAVAPSPRPGLPLDEERSCSAASLNPLDCKPREPEVRVGEKISGQGQNMGAETMTFTGAKIIAAVKERGAPDRSFSAYRNGEGVKAATADLVLRIDREQEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWTFLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAI 1383
VA AV++ F+ +L+ + K EWTVLAGIV Q P + S + RV++ ATGNKC+GR + DG VV+D HAEVLARRALL L+ E L + S S + + H R L+L KP LHL+IS+APCGDA+IYE +++ N L C++ + P E+RV TGAK ++ PD F+ Q VG R+KS RS++ + +T+SMSCSDKLAKW LG+QG LL W EPIFLSS+ +S D + A AL RA+
Sbjct: 10 VAHAVLQWFETSLQCQKKIPISEWTVLAGIVLQTLSP----PSSAPQPVSTNTFRVLTAATGNKCLGRRDLNADGFVVNDCHAEVLARRALLRYLYIEALL------------------------------WKENKSESNEQSIFEYH-------------STSRRLVL-----------------KPQHSLHLFISEAPCGDAAIYELRQEVVNQ-------------------------------------------------------------------------LVQQRRAGCNSTDDETENHVPSRSELRV------------------TGAKRPRH-RDTLLPDNRFT------------------------QTVGVARVKSGRSDLPLDKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLSSVCVSGDDKAMSVAKQERALRRAV 285
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Match: A0A8J5MBZ2_9STRA (A to I editase domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MBZ2_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.810e-22 Identity = 128/481 (26.61%), Postives = 174/481 (36.17%), Query Frame = 1
Query: 7 LGDRVASAVVEQFD-NLKPRGKPQGKEWTVLAGIVAQDTRTECCTPVAGANSSSCSCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSTAGRQQDVTVGERKGGGIPSNSDRSEGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQAADAGTCASWRL--KPYIRLHLYISDAPCGDASIYEQKRQAPNVGGGGSSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGDDRGDAKRARCAVATAGLSDAVAPSPRPGLPLDEERSCSAASLNPLDCKPREPEVRVGEKISGQGQNMGAETMTFTGAKIIAAVKERGAPDRSFSAYRNGEGVKAATADLVLRIDREQEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWTFLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGR-----AALANRRSSCD 1425
+ VA +V++ F+ N + R K EWTVLAGIV + + ++ RV++ ATGNKC+GR + DG VV+D HAEVLARRA L LY L +++G LE S Q+ S RL KP LHL+IS+APCGDA+IYE ++ +DE V+ E +GQ + TGAK + R D+ D +D++ Q VG R+KS RS++ E +T+SMSCSDKLA+W LG+QG LL W EPIFLSSI++S D + AL RA+ R A + R SC+
Sbjct: 246 IASSVARSVLQWFESNSQCRKKIPPSEWTVLAGIVLRSPSSS--------DAGPSDKFRVLTAATGNKCLGRRDLNADGLVVNDCHAEVLARRAFLRY----------------------------------------------------------LYAEALFWQENG----LESSEQSIFERHATSHRLVLKPQHSLHLFISEAPCGDAAIYELRQDI------------------------------------------------------------------------------VDEL-------------------VQQREAKTGQADQRDRSELRLTGAKAHNK-RSRDVDDQK---------------DHATPLDKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLARWNALGLQGSLLLQWFEPIFLSSIIVSEDAKAMSVTKQEQALQRAVCARLEERNALVEGERLSCE 543 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1345.2061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1345.2061.1 >prot_E-siliculosus-1a_F_contig1345.2061.1 ID=prot_E-siliculosus-1a_F_contig1345.2061.1|Name=mRNA_E-siliculosus-1a_F_contig1345.2061.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=779bp MLLGDRVASAVVEQFDNLKPRGKPQGKEWTVLAGIVAQDTRTECCTPVAGback to top mRNA from alignment at E-siliculosus-1a_F_contig1345:6886..11697- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1345.2061.1 ID=mRNA_E-siliculosus-1a_F_contig1345.2061.1|Name=mRNA_E-siliculosus-1a_F_contig1345.2061.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4812bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1345:6886..11697- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1345:6886..11697- >mRNA_E-siliculosus-1a_F_contig1345.2061.1 ID=mRNA_E-siliculosus-1a_F_contig1345.2061.1|Name=mRNA_E-siliculosus-1a_F_contig1345.2061.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4674bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1345:6886..11697- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |