mRNA_E-siliculosus-1a_F_contig134.2049.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig134.2049.1
Unique NamemRNA_E-siliculosus-1a_F_contig134.2049.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: A0A6H5KI98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI98_9PHAE)

HSP 1 Score: 1310 bits (3391), Expect = 0.000e+0
Identity = 848/908 (93.39%), Postives = 856/908 (94.27%), Query Frame = 1
Query:  202 MTPPAAKRRRSVDHHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELIRTNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQASIQQDTGSPTMWGDACCVMLSGTFGNVVKAQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQAPVGFQQPPPFGQQPXXXXFGASXXXXXXXXRPGPNMGQPPFQQXXXXXXXXXXXXXXXXXXXXXRGPPRGRADLPPVENITFTSIRQLNAPGLTSASKQPGGVLMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMPVLMKAANMICAVLRNGERLAAAAREAAGGGRXXXXXXXXXXXXXXXXXDRNRGGPAPYNPAGPPQSAQPQPTAAPVNYQYQQAPPQQQNVQYAPAPAMQSTYPAQQQGFVALQAAPGAPIQQAYQQYXXXXXXXXNPGQQQQLAPQGVPQQXXXXXXAQGAAGQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGGTPSQGGPQAIQYAQVQQPXXXXXXXXXXXXXXXXGLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPVXXXXXXXXXXXXXXXXPVASTSAAVATPAPVYGWVYDPATGTYTAAP 2925
            MTPPAAKRRRSV+HHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAG+EPNG+ADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELIRTNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNV+  IQQDTGSPT+WGDACCVMLSGTFGNVV+AQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQ PVGFQQPPPFG   XXXX    XXXXXXXXR GPNMGQPPFQQ  XXXXXXXXXXXXXXXXXX RGPPRGRADLPPVENITFTSIRQL+APGLTSASKQPGG+LMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMPVLMKAANMICAVLRNGERLAAAAREA GG  XXXXXXXXXXXXXXXXXDRNRGGPAPYNPAG PQSAQPQPTAAPVNYQYQQAPPQQQNVQYAPAPAMQSTYPAQQQGFVALQAAPGAPIQQAYQQYXXXXXXX  PGQQQQLAPQGVPQQ      AQGA GQY   XXXXXXXXXXXXXXXXXXXXXX      PAGGTPSQGGPQAIQYAQVQQP       XXXXXXXX GLM      XXXXXXXXXXXXXXXXXXXXXXXX  LPVXXXXXXXXXXXXXXXXPVASTSAAVATPAPVYGWVYDPATGTYTAAP
Sbjct:    1 MTPPAAKRRRSVEHHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGMEPNGIADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELIRTNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVK--IQQDTGSPTLWGDACCVMLSGTFGNVVRAQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQTPVGFQQPPPFGXXXXXXXXXXXXXXXXXXXRQGPNMGQPPFQQQQXXXXXXXXXXXXXXXXXX-RGPPRGRADLPPVENITFTSIRQLSAPGLTSASKQPGGMLMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMPVLMKAANMICAVLRNGERLAAAAREAGGGXXXXXXXXXXXXXXXXXXXDRNRGGPAPYNPAGLPQSAQPQPTAAPVNYQYQQAPPQQQNVQYAPAPAMQSTYPAQQQGFVALQAAPGAPIQQAYQQYXXXXXXXQTPGQQQQLAPQGVPQQQQQAPPAQGAVGQYAPQXXXXXXXXXXXXXXXXXXXXXXAVFYQQPAGGTPSQGGPQAIQYAQVQQPQQQQQLGXXXXXXXXQGLMQQQQQPXXXXXXXXXXXXXXXXXXXXXXXX--LPVXXXXXXXXXXXXXXXXPVASTSAAVATPAPVYGWVYDPATGTYTAAP 903          
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: D8LLL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL1_ECTSI)

HSP 1 Score: 1244 bits (3220), Expect = 0.000e+0
Identity = 695/781 (88.99%), Postives = 706/781 (90.40%), Query Frame = 1
Query:    1 LTFALPYYFRTNGKRGSWRRQLFAGAGEEGR--HHLTGIYVRSGVARLRGQRILPNSS-QDPLSRQPSVSMTPPAAKRRRSVDHHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELIRTNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQASIQQDTGSPTMWGDACCVMLSGTFGNVVKAQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQAPVGFQQPPPFGQQPXXXXFGASXXXXXXXXRPGPNMGQPPFQQXXXXXXXXXXXXXXXXXXXXXRGPPRGRADLPPVENITFTSIRQLNAPGLTSASKQPGGVLMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMPVLMKAANMICAVLRNGERLAAAAREAAGGGRXXXXXXXXXXXXXXXXXDRNRGGPAPYNPAGPPQSAQPQPTAAPVNYQYQQAPPQQQNVQYAPAPAMQSTYPAQQQGFVALQAAPGAPIQQ 2334
            L    P YFR NGKRGSWRRQL AGAGEEG   HHLTGIYVRSGVARLRG+RILPNSS +DPLS QPSVSMTPPAAKRRRSV+HHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNG  DV DMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNK+QREAALELIRTNPKITGRVASP+EPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQ  IQQDTGSPTMWGDACCVMLSGTFGNVV+AQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQAPVGFQ        P      AS         P  +   PP +                             ADLPPVENITFTSIRQL+APGLTSASKQPGG+LMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMP+LMKAANMICAVLRNGERLAAAAREAAGGGRXXXXXXXXXXXXXXXXXDRNRGGPAPYNPAGPPQSAQPQPTAAPVNYQYQQAPPQQQNVQYAPAPAMQSTYPAQQQGFVALQAAPGAPIQQ
Sbjct:    3 LNICTPPYFRKNGKRGSWRRQLLAGAGEEGGLGHHLTGIYVRSGVARLRGRRILPNSSPEDPLS-QPSVSMTPPAAKRRRSVEHHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKSQREAALELIRTNPKITGRVASPSEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQVKIQQDTGSPTMWGDACCVMLSGTFGNVVRAQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQAPVGFQG---LLNNPRRS---ASSLPRTGLAPPPSSEASPPARAPTW-------------------------ADLPPVENITFTSIRQLSAPGLTSASKQPGGMLMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMPILMKAANMICAVLRNGERLAAAAREAAGGGRXXXXXXXXXXXXXXXXXDRNRGGPAPYNPAGPPQSAQPQPTAAPVNYQYQQAPPQQQNVQYAPAPAMQSTYPAQQQGFVALQAAPGAPIQQ 751          
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: A0A7S3XW37_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW37_HETAK)

HSP 1 Score: 182 bits (462), Expect = 6.900e-45
Identity = 118/374 (31.55%), Postives = 200/374 (53.48%), Query Frame = 1
Query:  289 IMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELIRT----NPKITGRVASPTEPEVAA-----VHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQASIQQDTGSPTMWGDACCVMLSGTFGNVVKAQRMILERIANTSDRLKE 1383
            ++ P D +G +IGKGG+ +R +QE++G  + LQ+ KS+P+G KER V LSGS+D +   E+LIFE++ A R          ++ +   E+ K                       V+W++    CG +IG  G+G++ I+  SGA VRVAT+  +     ER+V + G+  Q E AL++++     +P++     +  +    A     + VP K++G ILG  G+ I+ +T+++GA ++V++  E+  G  E  V + G P+  + AR  + +RV  W+      G+       LK A+P  L+G ++GKGG+ +RE+ +  NV   I QD GS     D   VM+ G    + +AQRM+++R+ +    LK+
Sbjct:  233 LLFPLDGIGTIIGKGGATIRRIQEESGCNLRLQDPKSVPDGMKERAVILSGSMDTIIEAERLIFEQIAAER----------QQVQEGPESEKT----------------------VKWLVPVEKCGLVIGPKGAGVEEIKQASGAYVRVATKFDMPAGHTERLVTIAGSPEQVERALDMVKDRAGGHPQLPASGWNKGQEATVAGDKEVMFVPLKSIGHILGSHGSEIKRITQESGATVQVST--EMFIGDTERVVTLQGSPESRLRARQLIAERVGTWQQEA---GDQAVDTICLKTAIPYCLIGQVLGKGGSAMREISTTCNVSVKINQDMGSFCDTCDNRPVMMIGELEGLYRAQRMMIDRMLDAPRHLKD 569          
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: A0A4D9CVC2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVC2_9STRA)

HSP 1 Score: 174 bits (441), Expect = 9.750e-41
Identity = 125/390 (32.05%), Postives = 200/390 (51.28%), Query Frame = 1
Query:  283 LSIMCPSDAMGMLIGKGGSGLREMQEKT-GVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAE-RIVYVKGNKAQREAALELIR--TNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPN-----------------GEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQASIQQDTGSPTMWGDACCVMLSGTFGNVVKAQRMILERIANTSDRLKEMV 1389
            L+I+ P++AMG+LIG+ G+  +E+  +   V++ +Q+ K + EG  +RG+ LSGS + VA  + LI +KL  RR + +     E+           AG +P                 V+W +     G LIGK G+ + +I + SGA++R+  E  L     + R VYV G KA+R+ AL LIR        G +     P+   V VP +AVG ++G +GA ++ L E TGA++ +A   +   G  E  + + GG ++I AAR  +++RV  WR   +                      EE E T+K ++P PL+GH+IGKGG+F+RE L  + V   I Q+  S T   D   VML+G    V+  ++ +L+R+A+   +  E +
Sbjct:  236 LTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTL--------FAGSDPR--------------VTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIGDTEMGSNETSIVLDGGQQEINAAREIVRERVFAWRMQESKERAERALTEAAAEELGMQASAEEEEVTIKFSLPVPLMGHVIGKGGSFIRE-LHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMASAPPKAIEQI 602          
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: K8Z837_NANGC (Kh domain protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z837_NANGC)

HSP 1 Score: 172 bits (435), Expect = 2.640e-40
Identity = 123/386 (31.87%), Postives = 196/386 (50.78%), Query Frame = 1
Query:  283 LSIMCPSDAMGMLIGKGGSGLREMQEKT-GVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADVGDMND-----PNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAE-RIVYVKGNKAQREAALELIR--TNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPN-----------------GEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQASIQQDTGSPTMWGDACCVMLSGTFGNVVKAQRMILERIAN 1362
            L+I+ P++AMG+LIG+ G+  +E+  +   V++ +Q+ K + EG  +RG+ LSGS + VA  + LI +KL  RR                           N +   G++ D     P+    V+W +     G LIGK G+ + +I + SGA++R+  E  L     + R VYV G KA+R+ AL LIR        G +     P+   V VP +AVG ++G +GA ++ L E TGA++ +A   +   G  E  + + G  ++I AAR  +++RV  WR   +                      EE E T+K ++P PL+GH+IGKGG+F+RE L  + V   I Q+  S T   D   VML+G    V+  ++ +L+R+A+
Sbjct:  236 LTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRR---------------------------NSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIGDTEMGSNETSIVLDGSQQEINAAREIVRERVFAWRMQESKERAERALTEAAAEELGMQASAEEEEVTIKFSLPVPLMGHVIGKGGSFIRE-LHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMAS 593          
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: A0A7S3XK83_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK83_HETAK)

HSP 1 Score: 139 bits (349), Expect = 6.590e-32
Identity = 105/392 (26.79%), Postives = 184/392 (46.94%), Query Frame = 1
Query:  283 LSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELIRTNPKITGRVASPTE---------PEVAA----------------VHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNP--NGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQASIQQDTGSPTMWGDACCVMLSGTFGNVVKAQRMILERIANTSDRL 1377
            ++++ P + +G +IGKGGS +R++Q      V LQE  ++PEGA ERGV LSG +D + + ++ I   ++  R                       G+E       G   D       +W++ +   G +IGK G+GI+ ++  +GA + VA    + K + +R+V V+G++A  E A +++     + G V  P E         P   A                + VP +++G +LG  G  I+ +T ++ A +++A    +  G  +  V ITG P+    AR  ++  VA+W+       + E E+ +  +K+AVP  L  H++G+ G F+R+V     V   +  D G+     D C +M+ G    V  AQR++  R+    + L
Sbjct:    7 ITLLFPIEGIGTIIGKGGSTIRQLQRDAECNVRLQEPSTVPEGAAERGVTLSGPVDHMLDAQRRILAVIDQER----------------------RGLE-------GQAEDEGDEKTHKWLIPDHRAGLVIGKRGAGIEELKKKTGAHIWVAAVYEMPKGTEDRLVTVRGDEAACEKARKMLED---LVGSVVVPLEDGGQRNLRWPAKGAAGAAGGMAIGGDDQELLTVPIRSIGALLGSGGGEIKRVTVESKANIQIAQ--NMFLGDVDRSVTITGTPEARAKARAMIEATVAKWKADQGDQYHEEGEKRDLCVKMAVPAALAPHLLGRSGAFIRQV-QACGVTVKLLSDKGTFNRLVDYCPLMIIGKLAAVEAAQRLLQARVREAPEDL 363          
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: W7T8V1_9STRA (Rna-binding protein nova-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T8V1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.760e-21
Identity = 79/244 (32.38%), Postives = 126/244 (51.64%), Query Frame = 1
Query:  283 LSIMCPSDAMGMLIGKGGSGLREMQEKT-GVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADVGDMND-----PNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAE-RIVYVKGNKAQREAALELIR--TNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVA 987
            L+I+ P++AMG+LIG+ G+  +E+  +   V++ +Q+ K + EG  +RG+ LSGS + VA  + LI +KL  RR                           N +   G++ D     P+    V+W +     G LIGK G+ + +I + SGA++R+  E  L     + R VYV G KA+R+ AL LIR        G +     P+   V VP +AVG ++G +GA ++ L E TGA++ +A
Sbjct:  111 LTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRR---------------------------NSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLA 327          
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: A0A3B4YXF0_9TELE (RNA-binding protein Nova-1-like n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4YXF0_9TELE)

HSP 1 Score: 80.9 bits (198), Expect = 2.660e-12
Identity = 86/343 (25.07%), Postives = 153/343 (44.61%), Query Frame = 1
Query:  283 LSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELI----RTNPK-----------ITGRVAS--PTEPEVA--AVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQASIQQ 1254
            L ++ PS A G +IGKGG  + ++Q++TG  + L ++K    G  ER   + G+++ +  V   I EK+                 EM   A K    EP  +       +P+++   + I+ N+  G +IGKGG+ ++ +   SGA V+++ ++  G +  ER+V + G   Q   A+E+I    + +P+           ++G VA+  PT    A  A  +P+ A        G  + A+T            +  T G G +    +G    ++AA  A  +  A    ++            +++AVP+ LVG I+GKGG  + E   +T  +  I +
Sbjct:   35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVR----------------EMPQSAQKP---EPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS-QKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNVSGPVANSNPTGSPYANTAEVLPNAAAAAATAFSGNDLLAITSALNTLASYGYNTN-TLGLGLNPAAASG----VLAAVAASANPAAAAALADGAKD-------VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 345          
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: A0A7S4R5U7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R5U7_9DINO)

HSP 1 Score: 81.6 bits (200), Expect = 4.030e-12
Identity = 73/253 (28.85%), Postives = 120/253 (47.43%), Query Frame = 1
Query:  664 GWLIGKGGSGIQNIEATSGAQVRV-ATERSLGKDSAERIVYVKGNKAQREAALELIRTNPK-------ITGRVASPTEP--EVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTL------KVAVPQPLVGHIIGKGGTFVREVLSVTNVQASIQQDTGSPTMWGDACCVMLSGTFGNVVKAQRMILERIANTSDR 1374
            GWL GKGG+ I+ +EA SGAQV +  T + LG       V + G+    +AA ++I    +       I GRV +   P  EVA  H+P K VG++ G  G+ I+ +  KTGA++R+    + T   G     ITG P  +   +  ++  V   +  +    E  +    +      +V +PQ  VG I G GG+ ++++ + T    ++ Q T     +  A   M+ G    VV A+++I   +A   +R
Sbjct:   45 GWLKGKGGAQIREVEARSGAQVSIDQTTKELGYSR----VMLAGSAEAVQAAHDIITDELRRVMERDGIAGRVTAAPGPGDEVAETHIPQKYVGWLKGSNGSQIRDMEAKTGARVRI---DQSTRESGYSVAQITGPPDAVRQCKAFVEAEVVRVQERDRVVAEHAQQPSAMGSNGFNEVQIPQQYVGWIKGSGGSQIKDIEARTGAHITVDQST-QDLGYSRA---MVYGPDEAVVAAKQVIQSELARVMER 286          
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Match: A0A3Q0SIN8_AMPCI (NOVA alternative splicing regulator 1 n=2 Tax=Cichlidae TaxID=8113 RepID=A0A3Q0SIN8_AMPCI)

HSP 1 Score: 79.0 bits (193), Expect = 9.830e-12
Identity = 83/339 (24.48%), Postives = 152/339 (44.84%), Query Frame = 1
Query:  283 LSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADVGDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELI----RTNPK-----------ITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQASIQQ 1254
            L ++ PS A G +IGKGG  + ++Q++TG  + L ++K    G  ER   + G+++ +  V   I EK+                 EM   A K    EP  +       +P+++   + I+ N+  G +IGKGG+ ++ +   SGA V+++ ++  G +  ER+V + G   Q   A+E+I    + +P+           ++G VA+ + P   + +  +   G  L   GA   A++  +G  L   + +  T     +  +  G      AA   L    A    +       +  +  +++AVP+ LVG I+GKGG  + E   +T  +  I +
Sbjct:   15 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVR----------------EMPQSAQKP---EPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS-QKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNVSGPVAN-SNP-TGSPYANTGEAG--LTGMGAFPAAMSSLSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 329          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig134.2049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI98_9PHAE0.000e+093.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLL1_ECTSI0.000e+088.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XW37_HETAK6.900e-4531.55Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CVC2_9STRA9.750e-4132.05Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8Z837_NANGC2.640e-4031.87Kh domain protein n=1 Tax=Nannochloropsis gaditana... [more]
A0A7S3XK83_HETAK6.590e-3226.79Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7T8V1_9STRA1.760e-2132.38Rna-binding protein nova-2 n=1 Tax=Nannochloropsis... [more]
A0A3B4YXF0_9TELE2.660e-1225.07RNA-binding protein Nova-1-like n=1 Tax=Stegastes ... [more]
A0A7S4R5U7_9DINO4.030e-1228.85Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A3Q0SIN8_AMPCI9.830e-1224.48NOVA alternative splicing regulator 1 n=2 Tax=Cich... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig134contigE-siliculosus-1a_F_contig134:38360..50148 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size3024
Model size3024
Exons19
Ec32 orthologEc-04_005360.1
Ec32 ortholog descriptionK Homology domain, type 1
Hectar predicted targeting categorymitochondrion
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03041
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EggNOG OGsKOG2193@1,KOG2193@2759
EggNOG free text desc.insulin-like growth factor 2
KEGG ModuleM00178
KEGG Pathwayko03010,ko05206,map03010,map05206
KEGG koko:K02888,ko:K17391
Seed eggNOG ortholog2880.D8LLL1
Seed ortholog evalue0.0
Seed ortholog score1262.3
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927858.3299508-CDS-E-siliculosus-1a_F_contig134:38359..385011622927858.3299508-CDS-E-siliculosus-1a_F_contig134:38359..38501Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 38360..38501 +
1696318711.38511-CDS-E-siliculosus-1a_F_contig134:38359..385011696318711.38511-CDS-E-siliculosus-1a_F_contig134:38359..38501Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 38360..38501 +
1622927858.3411014-CDS-E-siliculosus-1a_F_contig134:40206..403671622927858.3411014-CDS-E-siliculosus-1a_F_contig134:40206..40367Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 40207..40367 +
1696318711.394687-CDS-E-siliculosus-1a_F_contig134:40206..403671696318711.394687-CDS-E-siliculosus-1a_F_contig134:40206..40367Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 40207..40367 +
1622927858.3524718-CDS-E-siliculosus-1a_F_contig134:40770..408421622927858.3524718-CDS-E-siliculosus-1a_F_contig134:40770..40842Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 40771..40842 +
1696318711.4023132-CDS-E-siliculosus-1a_F_contig134:40770..408421696318711.4023132-CDS-E-siliculosus-1a_F_contig134:40770..40842Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 40771..40842 +
1622927858.3644297-CDS-E-siliculosus-1a_F_contig134:41043..411991622927858.3644297-CDS-E-siliculosus-1a_F_contig134:41043..41199Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 41044..41199 +
1696318711.4097931-CDS-E-siliculosus-1a_F_contig134:41043..411991696318711.4097931-CDS-E-siliculosus-1a_F_contig134:41043..41199Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 41044..41199 +
1622927858.3775418-CDS-E-siliculosus-1a_F_contig134:41405..415821622927858.3775418-CDS-E-siliculosus-1a_F_contig134:41405..41582Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 41406..41582 +
1696318711.4171357-CDS-E-siliculosus-1a_F_contig134:41405..415821696318711.4171357-CDS-E-siliculosus-1a_F_contig134:41405..41582Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 41406..41582 +
1622927858.388911-CDS-E-siliculosus-1a_F_contig134:41882..420171622927858.388911-CDS-E-siliculosus-1a_F_contig134:41882..42017Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 41883..42017 +
1696318711.4245255-CDS-E-siliculosus-1a_F_contig134:41882..420171696318711.4245255-CDS-E-siliculosus-1a_F_contig134:41882..42017Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 41883..42017 +
1622927858.400638-CDS-E-siliculosus-1a_F_contig134:42547..427301622927858.400638-CDS-E-siliculosus-1a_F_contig134:42547..42730Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 42548..42730 +
1696318711.4321222-CDS-E-siliculosus-1a_F_contig134:42547..427301696318711.4321222-CDS-E-siliculosus-1a_F_contig134:42547..42730Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 42548..42730 +
1622927858.4117815-CDS-E-siliculosus-1a_F_contig134:43153..432791622927858.4117815-CDS-E-siliculosus-1a_F_contig134:43153..43279Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 43154..43279 +
1696318711.4419692-CDS-E-siliculosus-1a_F_contig134:43153..432791696318711.4419692-CDS-E-siliculosus-1a_F_contig134:43153..43279Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 43154..43279 +
1622927858.4235206-CDS-E-siliculosus-1a_F_contig134:43683..437761622927858.4235206-CDS-E-siliculosus-1a_F_contig134:43683..43776Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 43684..43776 +
1696318711.449595-CDS-E-siliculosus-1a_F_contig134:43683..437761696318711.449595-CDS-E-siliculosus-1a_F_contig134:43683..43776Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 43684..43776 +
1622927858.4337282-CDS-E-siliculosus-1a_F_contig134:44049..441901622927858.4337282-CDS-E-siliculosus-1a_F_contig134:44049..44190Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 44050..44190 +
1696318711.457053-CDS-E-siliculosus-1a_F_contig134:44049..441901696318711.457053-CDS-E-siliculosus-1a_F_contig134:44049..44190Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 44050..44190 +
1622927858.4443948-CDS-E-siliculosus-1a_F_contig134:44616..447361622927858.4443948-CDS-E-siliculosus-1a_F_contig134:44616..44736Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 44617..44736 +
1696318711.4643564-CDS-E-siliculosus-1a_F_contig134:44616..447361696318711.4643564-CDS-E-siliculosus-1a_F_contig134:44616..44736Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 44617..44736 +
1622927858.4572237-CDS-E-siliculosus-1a_F_contig134:45210..453031622927858.4572237-CDS-E-siliculosus-1a_F_contig134:45210..45303Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 45211..45303 +
1696318711.4741342-CDS-E-siliculosus-1a_F_contig134:45210..453031696318711.4741342-CDS-E-siliculosus-1a_F_contig134:45210..45303Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 45211..45303 +
1622927858.474438-CDS-E-siliculosus-1a_F_contig134:45862..459971622927858.474438-CDS-E-siliculosus-1a_F_contig134:45862..45997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 45863..45997 +
1696318711.483306-CDS-E-siliculosus-1a_F_contig134:45862..459971696318711.483306-CDS-E-siliculosus-1a_F_contig134:45862..45997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 45863..45997 +
1622927858.5853682-CDS-E-siliculosus-1a_F_contig134:46208..464301622927858.5853682-CDS-E-siliculosus-1a_F_contig134:46208..46430Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 46209..46430 +
1696318711.491728-CDS-E-siliculosus-1a_F_contig134:46208..464301696318711.491728-CDS-E-siliculosus-1a_F_contig134:46208..46430Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 46209..46430 +
1622927858.6020896-CDS-E-siliculosus-1a_F_contig134:46880..471471622927858.6020896-CDS-E-siliculosus-1a_F_contig134:46880..47147Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 46881..47147 +
1696318711.5013125-CDS-E-siliculosus-1a_F_contig134:46880..471471696318711.5013125-CDS-E-siliculosus-1a_F_contig134:46880..47147Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 46881..47147 +
1622927858.6173565-CDS-E-siliculosus-1a_F_contig134:47811..479221622927858.6173565-CDS-E-siliculosus-1a_F_contig134:47811..47922Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 47812..47922 +
1696318711.514135-CDS-E-siliculosus-1a_F_contig134:47811..479221696318711.514135-CDS-E-siliculosus-1a_F_contig134:47811..47922Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 47812..47922 +
1622927858.6292744-CDS-E-siliculosus-1a_F_contig134:48498..487201622927858.6292744-CDS-E-siliculosus-1a_F_contig134:48498..48720Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 48499..48720 +
1696318711.5280855-CDS-E-siliculosus-1a_F_contig134:48498..487201696318711.5280855-CDS-E-siliculosus-1a_F_contig134:48498..48720Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 48499..48720 +
1622927858.6768026-CDS-E-siliculosus-1a_F_contig134:49225..495551622927858.6768026-CDS-E-siliculosus-1a_F_contig134:49225..49555Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 49226..49555 +
1696318711.5366502-CDS-E-siliculosus-1a_F_contig134:49225..495551696318711.5366502-CDS-E-siliculosus-1a_F_contig134:49225..49555Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 49226..49555 +
1622927858.6930485-CDS-E-siliculosus-1a_F_contig134:50010..501481622927858.6930485-CDS-E-siliculosus-1a_F_contig134:50010..50148Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 50011..50148 +
1696318711.545017-CDS-E-siliculosus-1a_F_contig134:50010..501481696318711.545017-CDS-E-siliculosus-1a_F_contig134:50010..50148Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 50011..50148 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig134.2049.1prot_E-siliculosus-1a_F_contig134.2049.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig134 38360..50148 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig134.2049.1

>prot_E-siliculosus-1a_F_contig134.2049.1 ID=prot_E-siliculosus-1a_F_contig134.2049.1|Name=mRNA_E-siliculosus-1a_F_contig134.2049.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1008bp
LTFALPYYFRTNGKRGSWRRQLFAGAGEEGRHHLTGIYVRSGVARLRGQR
ILPNSSQDPLSRQPSVSMTPPAAKRRRSVDHHESVRNITVVKGGLSIMCP
SDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLD
CVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGVADV
GDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERS
LGKDSAERIVYVKGNKAQREAALELIRTNPKITGRVASPTEPEVAAVHVP
SKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPK
QIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGG
TFVREVLSVTNVQASIQQDTGSPTMWGDACCVMLSGTFGNVVKAQRMILE
RIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQAPVG
FQQPPPFGQQPPPYGFGASPQFGGQPPRPGPNMGQPPFQQQQQQAPFQQQ
QFQSGGPPPQQRGPPRGRADLPPVENITFTSIRQLNAPGLTSASKQPGGV
LMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTI
TSDEMPVLMKAANMICAVLRNGERLAAAAREAAGGGRGDRGPPGSNGSGG
GGGGDRNRGGPAPYNPAGPPQSAQPQPTAAPVNYQYQQAPPQQQNVQYAP
APAMQSTYPAQQQGFVALQAAPGAPIQQAYQQYPGQQVQPQNPGQQQQLA
PQGVPQQQQQAPPAQGAAGQYAPQQQQQQQPPQAQQAPQAQQQQPAAVFY
QQPAGGTPSQGGPQAIQYAQVQQPQQQQQLGQPQQPQQQQGLMQQQQQPQ
QQQQQPPQQQQPQQQQQQQQQQQQQLPVQQLPLQNQQGQQQGQQPVASTS
AAVATPAPVYGWVYDPATGTYTAAPAAAAPAPQASSFNAQPQYTQQQQQQ
QQQQPQR*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig134:38360..50148+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig134.2049.1 ID=mRNA_E-siliculosus-1a_F_contig134.2049.1|Name=mRNA_E-siliculosus-1a_F_contig134.2049.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11789bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig134:38360..50148+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTGACATTTGCACTCCCCTACTACTTTCGAACGAACGGAAAGAGGGGGTC TTGGCGTCGTCAACTTTTCGCGGGAGCAGGAGAGGAAGGCAGGCATCATC TCACCGGTATCTACGTTCGGAGCGGTGTTGCGAGGTTGCGAGGTGAGAGG AGTGTGCGCAGAATATCACCAACTCAAGGTATATCTGCCGATGTATCGAG GCCTCGCGGGAGGTTCAGCGGCTCCGGAGTGAGCGTGCGCGACCTGCGTG CTTTTTATTTTGTGTGGGTGGCGCCGAAATGTGCTTCCCCCTCCATCCAT CCTGAACCCCTGTCGCAAGAGAACACGTCGACAAACAAAAATAAAAGGGA AGGCCAGGATTGGCGCACACCAAGGCCATGGAACGAGAATGGCGTTGTTG GCCCCCCGCGCGGGTTTGATCTCGCTCGGTGCGAGGTTCGGCGTCGCTCT TTCCGCGCCCCCCGAACCGCGCCCCCTGCCCATGTGTTTTCGTGCTCTCT TTCTGGTCCAAACAAGTTTTGAGACTTGCGACAGATCCCGCGCCGGTCAA CCGTGACCGAACGAAGTAAGAACGCGCGGGCGGGCGGGTGCCCACGAGGC CGTCTCGGCTGTTGTTTCCGGGTCGTTATCGAGAACCCTGTGGCTGGAAA TGTTTGGCTACCCCCTAAGTCCTCCTCCCTCTCTTTGCTCTCGGGGAAGC AGACGCGGCGGGGTATTCTTCATCAGGCTTTTTTTTGCCCCCCCCTCCCG AAGCCGGAAAGTAATTTTGTGCATTGAAAATATGCCTTGGTTTTCTATAG GCGTCCACTGCCGCTGCCGCGGCCGCCGTGTGCTGGTCAACGACACGCGC ATTTACTTCCATTGGTAGTGCGTGCGTGGGTTGGATCACGTGCCCTTGCT ATTTGCGGTGCCTGTGCGGATACATACTCAAGTTGTTCTGGGATAGGCTG GTCTGGGAACATGGGACATTTCAACAAGCTGGTCACCATCTCTGACCGAA CAAAACAGAAGCCAAGATAAAGGAGCACCAGCAGCAGAGCCAGCTGGAGC TGGAAGCTGCTGGGGCCGAAAAGCCCGAAAAAAAAAAAAAATCTCCGTGG AGCCGCCGCACACAGCGCCGATTCGGTCGCCCCGGTATATAATTTAGGAG CAAATACCGGGCACCGGCACTATAGAGGCCCTCCCACTGCTGTACACAAC TTCGTTGTCTTCTATGCATAGCAGGCGAAAAGTGGCTCTCTCACTGAACG TTAATACGTACACGGGGAGTACCCTCGAAGGATGACGGTGGGGTATGTTC TGGAGGCTCCCCGATCCCCGAATAGACGACATTGGAGATCACCACCATTC GACGCGTACGATTTACGCACATAGGCAGGGTTTACAGTCGAATTTATGAG CATGTCCCCACCTTTAAAAGTTTTCTTCGATTTTCTTACTTGAAACATGG ATATGCACAACATCACACCATGACCCCCCGATTAAGGTTGTAGGTGCTGC CGACGGCCTGCGCACGTAACAGCGCCGTGAGGGTCGGGGTTAAACCTCAT CACACTAGCCGATTGAGATTGCATGTGCGTCACAGCTGATGCACCTGCCG TATGCGTGAGGGTCGGGTGGGAAGTCGTGCTGTGACATAAAACAACCCCG ACCATCACGACGCGGTCAGGTGCCCAAGCTGTGGGAAGCACAACCGATAT ATGGATCGGGTACGCAGCCTAATGTTGTGCATATATGTTCAATTGAAGCT CGATAACCTTATCTTGTTGCGACATTTTCACCTACATACTCTTTGTCCCC TGCTTTCCCGCTCCTGATGTTGCGATTGGTTCAACCGCAATCCCAAGGTC AGCGCATTCTCCCCAACAGCAGTCAAGACCCTCTCTCTCGTCAACCTTCT GTAAGCATGACTCCCCCTGCGGCGAAGAGGAGGCGTTCGGTGGATCACCA CGAGTCCGTCAGGAACATCACGGTGGTGAAGGGAGGCCTAAGCATCATGT GTCCGTCGGTGAGCTATTAATAGATACATCCATCACGTGGACGTCGTGGT AGTGGTGACTACTACGGAGCAATTGTTGCTCCTTGTATGCATAGCTCGAC GCCGTTTCTCGTGAGAGTTAGGAAGCACGCAACGACTGCTGGCATGCACC CTGCAAAGAGATGAAAGGCAGAACGACAGGTCTGCTGGTGCACCTCTAGC GGCAATCAGGCCGGCACTCCCGTGATATTTTCGAAGAGAGTTAGTTGCTC AAAGTTCGAAGGATGCATCATCTTTCGGTGTCTTTCGCTGTCAAAATGTG CCCACCAACGGAATCCATGTCGCTAACGTACAACGACGTGTCCTCCGCCC CCTCCCTCCCCTTTTTGGGTTTTTGGTTGCCATTGCTGTATTCTGTACTC TCTTGGTTCAGGACGCCATGGGCATGCTCATCGGCAAGGGAGGCTCTGGC CTGCGCGAGATGCAGGAAAAGACCGGGGTGAAGGTACGTACATACGGGCG TTGTTTGTTGTATTTGCTTGTTGGAAAAACATTGCACATGCATATGTATG TACCCTTTTCTCGAGCCCGGTATCTCACATTAACATTGCCTTCGCATGTG TATATACCTATTTCTCGAGCCAGGAATCTCACAACGCTGCACGTGCACGT GTTTGTATGCATGCGCCTTTTTTTCTCGAGCCAGGTGTCTCTCCAGGAGA CCAAGTCAATCCCCGAGGGCGCCAAGGAGCGCGGGGTCGGTCTCTCGGGA TCCCTGGACTGCGTGGCCAACGTCGAGAAGCTCATCTTCGAGAAGCTCAA CGCGCGCAGAGTCACGAGCCTCGCGCCCTCCCCCGCCGAGGTGAGAGTTG GTTGCACATCACTTGTGTATTCGTGCGTGTTGTTAGCATCGACGGCGCTC GCCGGCTGACCTTTAAAAAATGTCAAAATGTACAGGTTTTTAAGGCGTGT TGCGGATCATTGTCGACGATCGATTGTCTCATGTTGTGGTCCTCGTCTGT TGTCTGTACGCGTGTGCCATGTGTTACGTGATCGCTATTCGTTCAGGAGG AGTTCGAGATGGCCTACGAGGCGGCTAAGGCCGCGGGCATCGAGCCGAAC GGGGTCGCGGACGTGGGCGACATGAACGACCCCAACAAGATCACGGTCGT GCGCTGGATCATGGACAACGCGCACTGCGGGTGGCTCATCGGGAAGGGCG GCAGCGGCATCCAGAACATCGAGGTGCGTTCATACGTCGGGCTCACCAAT GACGGGATTCTAAGACCGGTCGTGACGTCGCCCAGAACGTGCCATTCCTC CCCCCCTCTTGAGATTGGTTGGGCTATGGTGGTGATGGTGGGGGAATGCA GCGGGGCAGTGCAGTAGTTGCATGGTGTGGTGTTTGGGGAGACTGCTGTC GTGGGCGGTGGTGTGGCGTCGTTGTTGCTAGTGTTGCTTGCACCACGTCT GCGTCTTCTCACTACGTGCCGGAACTGCACCTTTCGCCGCTGCTGCTGCC GTTAACGTGTGCGCGCGGAACAGGCCACCTCGGGAGCGCAGGTGCGTGTT GCCACGGAACGGAGCCTGGGCAAGGACTCCGCCGAGCGCATCGTGTACGT GAAGGGCAACAAGGCTCAGCGAGAGGCCGCCCTCGAGCTCATCCGGACCA ACCCAAAGGTGGGTGGGGCGGTGATGCGGCTAGATACAGCCTCGTGGTGT TCTCGTATTAGTTAGTTCGCTGGCAATAGAGAATGAACCACGCGTAGGCT CGCTGTTCAAGTCGACAGCGGCTTGTCGAACCTCACGAAGTAGACTAGAT ACAAGGCACGAATGGTTTTGTGAAGACAGCAACGACCTGATGGTGTTCTG ACCAAACGTTGGGCTTCAGGTGGTAGTGAATGTTGGGCTTTAGGTCCCGC GACACGATTGCGATAAGAAAGCCTACCCCGAACAGGAAGCATCTAGAAGG GCACATACCTCAACAGGCCGAAATAGAGAAAGAGACATGGCCTGCCCTGC TTGTGCGCGGCGGCACTCGACGTGACCATCATTGCCGAAAAAGCGGACAA ACCACTGCTGTCACCGCGATCCGCCTCGGTGGCGCCATCTCTCGGTCGTC ATCGGTACCACCTTCCTGCTTGCTGCACCTAATCATCATCTCGAGTGCGC AAGAAATTAACGCGAAAAACAACCGCTGCTGTCCGCAGATCACCGGGCGT GTCGCCTCCCCCACGGAGCCGGAGGTTGCGGCCGTGCACGTGCCCTCGAA GGCCGTCGGGTTCATCCTGGGGCACCGCGGTGCGTCGATCCAGGCCCTCA CGGAAAAGACGGGGGCCCAGCTCCGCGTCGCCTCCGGGAGCGAGGTCACC ACCGGCGGCGGCGAGCACAGGGTGAGCGGTGGGGATGGACGGAGATGTTT GTAGTGTGTATGAATGAGAGAAGTGTTTTGCGGAGGGCGAGTGAAAGAGG GAGAAGGATGGAGAGAGGCGTTGATGCGTGCGTGAGAGAGAGGCGTGTTG TGCGGAGTGGGTAGCTGACGAGTAGAAGATGAAGAGGGCGATGGAGAAGG GGCGTTGGTGTGTTTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAA AGGTGTGTTCCGGGGAGGGGGGAGCTGACGGAGCGAGACAGCTGTGTGTG TTTTGTCTCTCGCCCAAGTGTTGGTGCCGCCCCCGCTAGGTCGATTCGGT AGAAGTTGTGGTACTATTTATATTGGCGATTACGTGTTCGTCCTGAGAGC TGTCTCGCACGCATGGGGCAACGACACAATACCGCGACCGGCAGGTGGAC ATCACGGGAGGCCCCAAGCAGATCGTCGCTGCCCGCCACGCCCTCCAAGA TCGCGTGGCGGAGTGGAGGACGAGCAACAACCCGAACGGCGAGCCCGAGG AGCCGGAGTACACCCTCAAGGTGAGGGAGGGGGAGAAAGAGAGCAATCTT CCGATTGGGCAGGAAGCAGTGGAGTGATTCGTGTTGCGTGATATTGAGAT TGAGAGTTGAGAGTATGGTGTTGGTGGTGACTGCGAGGAAGAGACGATAC CGGAGAAGAAAACGTTCGACGACGGCAATGTCGGACGGTAGTCGAAGACA TACGTGGGTGGCCCGCTTGTTGCGGGGTGGTTCATCCACTCAACACGTTC CTTAGGGGCTGACGCCATTCCTCAGGAAGTTCTGTAGGCCTAAGGGGTTG TTTTCCATCAGAGCGAGGATAGCGTGTGCCCGCAGAAGGAGAGTTTGGTT ACTTGACGTTGACGAACAATGCGTCGCTCGTCTCTCTGTTGTGGTTGTTT TTCGTTCTGGTTTGGTGTTTGCAGGTCGCCGTGCCCCAGCCCCTGGTGGG CCACATCATCGGCAAGGGAGGAACATTCGTGAGGGAGGTCCTGTCCGTCA CCAACGTGCAGGCAAGTGTGGCTCAGACGCAGTCGCCTCTGCTGCTGTCG TGTCGTTTTCGCTCTTGTTGGCGTGCAACATCTCTCCGTCTCTCGTTCGG AGACGCCCTTCCACTAAAGGCGTAAGCGCGGTAGTTTTCGAACAAGCCAC GTGGACGATAGTACGGTGAACGTTTTCGTTGGGGTGTTCGCTTACCGAAA ACGTGTGTGTGTCTGTTGACGTTCGGTGTTCGAACTGTTGGTGCGCCCGC CCGCTGTCAACGTGTTCGTGGCTCGGACCAACAGGTGAAGATCCAGCAGG ACACGGGGTCTCCGACGATGTGGGGTGACGCGTGCTGCGTGATGCTGTCG GGCACCTTTGGCAACGTCGTGAAGGCCCAGCGGATGATCTTGGAAAGGAT CGCCAACACCAGCGACCGTCTGAAGGAGATGGTGAGTCAGTCCGGTCGGC CGAAGGCGCTCTTTGGCTGTACATGTGTATGTCGTTGAAACCTCTGATGT GTAGGGAACTGCGAGCACAGTTACCCCCCCCCGCCCTTCCGTGCACGGTT TCGTACCTGATTTTGTCTTCCAAGTGTACGAGCGAACGGTTGATGCACCC ACGTGGTTCGGATTCGGCAGTGCACGCCGAGTCGTTTGAAAATCTCACTT TGGTAGGCTTGTTTTGCGTCGCGTGCTTCACCCACTGAACCACTCCTTCC GGGTTCTGAAGTAGAGGTATGGTGGGTACAAGAGACACGCACGCGTGCTT TCACCATGATTTCTTGGTGCCTCGACCGAAACCTTATCCTCCATCGTTGC TGATTGTCCCGCACCCTTTTTCTCGATCTGTCGGACCTGCGTGTTGGCGT TCGTCAGGTGCCCAACGCCGTGAACATCCTTGAAAACCATGACCCTTCGG ATGAGATGAAGAGGGTGGAGGTGAACATTCAGCTCCCCGACGGACCCCCG CCGGTGCAGGCCCCTGTCGGCTTCCAGGTAAGCTTTAAAACTGCCCCCCC AACCCTTCCGGTAATTTGTGTATGTCTTGACGAGAGAACCTGCACAATTA TTGTGTATTTTGTCGCCACGCCACGGTTACGAGCCTAGGCTTTGTCCTGC ATGCCGACGGTGCGATGCTATGGTCGGTTCGGTGGCTCTGAAGGAACGCT GTGGGCGTTTGTTGAGATCGACACTGCCCTCCTCTCCCACCGCTTTCCTG GTGTAAATTGGGTCGCCTTTCTGGCGAAGGGCCTGATCTTACATGTGAAA GGTGTGGCCGAGATAGGCGAGACGTGGCACGGGTTTTAAGTTTTCACATT TGTGCGTGACGAACCACGTGTGGTCCTGTGAAAGCTCCTTTCCCGCCCTT GAGACACAACGCTATGGAGAGACAGCAGGCAGCGCACCCCCAAATAAATA AAAACACCCCCTTTGTGATGTTTGTGATGTTGTGGTTGTTGTGCTCCGCA GCAACCCCCGCCGTTCGGCCAGCAGCCTCCCCCGTACGGGTTTGGCGCCT CCCCCCAGTTCGGAGGCCAGCCCCCCCGCCCGGGCCCCAACATGGTACGA GAAATATAACTGCAGCATGCCTGCTTGGTATCCCCCCCTTGCCCTTCACG AGAAATCGGGCTTTTGGGGCGGTGTCCTACACACCCTTTCCTTGCTCGAG AAATTATCGGGAATCGGACTTTGGGGGGGCGGGGGGGGGCGGGGGCGAGT GGATTTTCTGTTCTTCTATATTTTTGATGTATGATGGCGTGGCCATGGCG TGGCCATGGCGTGCCCTAGTCCGCCGGTACACTTTGGGAAGGTGGGGGTA GACAGTCGTTTTGCTCGTTGCTGGTGTTGGGATGGTTGAGAGAGAGATTG TCGGCCGTTGGCTGTGTCACGTCAACATGGGCGCATGCCTTGCACGCACC CCCCCGCCCCACCTTCTTTGATAGCATGTAAAACTCACGTACGTTTTTCG ACCGCGGGTCGTTATACTTGTTGTCTCGTTTCGATCTCAATTGCCATCCT CCTCCTCGCCATCTCCCTTGCCTTCGCGTGTGTGTTGGACTGGGTTCATT TTTCCTGGTTGGCTCTTTCTTTTTTGGGTGAACGAACGACGACGACGATG CAGGGCCAGCCACCGTTCCAGCAGCAGCAGCAGCAGGCGCCCTTCCAGCA ACAGCAGTTCCAGAGCGGCGGGCCTCCCCCGCAGCAGCGTGGCCCTCCTC GCGGCAGGGCTGACTTGCCTCCGGTGGAAAACATCACGGTGAGTTGTTGT TTTGCTCACGTTGAAGACCGTTTCGGTCTCTTCGCGGTAGCTTGTAATAT CCGTACTGGTCGAACGGACGTGGACGCGTCCGGTTCACAAGCCAACCATT TTTTTTTTTTTTGAAAAGATGCTGTGGATACATTCACAGAAAGCGTTCGT GCGCATTTAAAGCACCCCTCCCCCCCCCCACCCTCTTGCCTTTTTCCAGT TTACTTCCATCCGCCAGCTTAACGCGCCAGGCCTTACGAGCGCGTCGAAG CAGCCGGGAGGTGTGCTGATGCTGGTGGACAACTCCGTGGTGGGGTCGAT CATCGGCAAGGGAGGTCAAACCATCCGCAAGATCTCCCTGGAGAGCGGGT CCTCCATCCAGGTTCAGGGCCGTGATGAGCAGTCCCCCAGCCAGCTCGAG CGCCGGGTTACCATCACCTCGGTAAGTGTTTTTTTTTGGTGGAAAATGTA CGACAAAGCAAGACTACACTACACGTACATGTTCACACAAAAACACGTCG ATTGTTTTTGTTCCTGCAAACACACGGCTAAGTAATCTCTTGTCCTTTTT TCGTTGATGTGAAGGGAAAGGGCAGGCTTGTTTGGTGGGTCTTCTCTGTG CCACATGTAGGGCCCAGATGAACTAGTGACGGGGTCCGAGATCACTCGTT ACCCTTTTTTGCCTCGTAGCTGTGCGCCTTTTTGCCCCACCCTGTGTCCT GCCCATGGGTCCTGGGATAAAGGGGCCCACCATCATGCAGACGGAAATCC CGTCGGTGATGATTGAAGGGCAGGCGGCTGTAGCTGGAACTCCGGGTGCA TGCATCCATCCCTAACGTCGCCCGCCGTCCTGGCCTTTCGGTTTCGATCG TACAATGCTTACCAAAAACAGGACGAGATGCCGGTTCTCATGAAGGCCGC CAACATGATCTGCGCAGTCCTGAGGAACGGCGAGCGTCTCGCCGCTGCCG CCCGCGAGGCGGCCGGAGGCGGCCGTGGCGACCGCGGCCCACCCGGCAGC AACGGCAGCGGTGGCGGTGGTGGAGGCGACCGCAACCGCGGGGGCCCTGC GCCGTACAACCCTGCGGGCCCCCCTCAGTCTGCACAGCCGCAGCCCACCG CGGCCCCCGTGAACTACCAGTACCAGCAGGCGCCGCCGGTGAGTGGTGTC TGTCGCGTGGGTTGGTGTTTGGTTGGAGGGTTTGGGGGCTACCATCGTGG TGGGCTATAGTAGTTGTTGACGGGCAGGGGGGATCGGAGGCAGGTCATGG TGTGAGGGAGGGGCGTTATATATACCGTCGGTTTCGTACATATCTGTTGT AGCTTTTGAAGGTTTGGTGGCTGGTTTTCTACCAGGAAAACCTGCAAGGA GTCACAATTCTGGCCAAGATTTTGGCGGAAGCGTCGTCCATCTGCACAGG AAGTAAGTCGAGGGGTGCCGTTGTGATGTATACGTTCATCCAGTGTCGCA CCTTGTGGTACATGACTCTGGGATAATATGCCAGGGTGTGATTCTTTTTG GGTACTCGAAGACCTCTTTTAGTTCGAGCTTTGATTCTTTTTGGGTACTC GAAGACCTCTTTTAGTTCGAGCTTCGTTTACGCTCCAAACCTAACAATGA ACTTCATGTTGCTTGGTTGTCACAGGCGATGTGGCGTTGAATCATCCAAC CCGATTATTTTTGCTCCGTTGTTGGGGATGACGGTGGTATTGACCTCTCT GGGATATTGTATGCATATTGACCTCTATTGGAACGGTACAAGCAACATTA GTGACCACCTCCCTCGCTTACGGCGTACCTCCCCCCCCCAATACACACAC AGCAACAGCAGAACGTCCAGTACGCCCCAGCGCCGGCCATGCAATCCACC TACCCCGCTCAACAGCAGGGGTTCGTTGCCCTCCAGGCGGCACCGGGGGC TCCTATCCAGCAGGTGCACGAAGTCTTGTTGCAGTTGGAGGCGATGATGA GTTGGTGGAACAAAACCTTTGCTTGTCTCTAGATTACAGAATTTTAAGAG TTGGCGCTGTTTCTGACGCTGATTTTTCACCCAGGAGATGATTGAAAGAA CGATCGCTCCTTCTGGTGCCTACTCTCCGCCAGTTGGGATTCACAGAAGG TTCAGATTAGCGCCAAGTATTGTTGCGAAAAGAAGATGATATGACCACCC CAGAAGAATAATCGTGTTGTTCGCTTCACTCGGAAGCCGATCCAACCACA GACGGAACAATCTATGCAACCATGCCAAAGGTCGATTTCATCACATGCCG TTTCACAGCCGGTGAGTTCCCATGTCGGGTTCCGTCCAACTTATTCCACC CCGCTCACGCGCCCTCGAGGTGTGTCGAGAGAGGCATCGTGACTTGTTTT TCCTCTTGTACTATTTGAGCTCATGCTAGTCACCCGTTCTCGCTGACTGG TTTTCGCCCTCCCTCACCCCCTTGTTATTTTACGCGTCTGTGGCGCGAAC CTTGCTGCTTGAAACCTGTTGTCGCGCCGCACCCACCAGGCGTACCAGCA GTACCCAGGGCAGCAGGTGCAGCCCCAGAACCCGGGACAACAGCAACAGC TCGCCCCGCAAGGCGTTCCGCAGCAGCAGCAGCAGGCGCCCCCCGCCCAG GGCGCCGCGGGTCAGTACGCCCCGCAGCAGCAGCAGCAGCAGCAGCCGCC GCAGGCTCAGCAGGCACCGCAGGCTCAGCAGCAGCAACCGGCTGCTGTGT TTTACCAGCAGGTGTGTGGGTGATTGCATCTGTTCAACAGTGTGGAATTT TGTGAAACTCAATTGAAACTACCATCTACCAATTAGTTCGGTATCGTCGT GGGTGCGTTGATGGAATATAACAGCAATTCATTTTTAGACGGCCTGCTGG AGCTAATTGTTTGCGGTTGTCAACAATCCTGCCAACCTATGTTGTAGGCT TGGTTGTGAAATGTCTTTCCCCCCTGTATCGTATGCCTCGAGACGCCCGC GGCGCGTGAAAGTCCTTCGCATTTGGCTTGACGGAGGTCTCTCTTGCGTG AAACAACACCCACCGTCATTTCCACGCCTTGCGCAAGGCAAGGCACGAGT CATCATGGTTGGTTTGGTTCTGTCTCCCAAGGCGTGTCTGCTGTCACTGC ATTATGTCAAAAGGTGGTGGGCTGGGCGTCGTTGCTTTTGATAGATAAGG GGTCTTACTGAACCCGTCTCTCTCCTTTCATCACGGTCGTGCCTCTTGGC TATGTTGTAAAATCAGCCTGCGGGTGGCACCCCTTCTCAAGGCGGCCCGC AGGCAATTCAGTATGCGCAGGTCCAGCAGCCGCAGCAACAGCAGCAGCTG GGACAGCCGCAGCAGCCGCAGCAACAGCAGGGCCTTATGCAGCAGCAGCA ACAGCCGCAGCAGCAGCAGCAGCAGCCGCCGCAGCAGCAGCAGCCGCAGC AGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCTGCCGGTGCAGCAG CTTCCGCTGCAAAACCAGCAGGGGCAGCAGCAGGGGCAGCAGCCAGTAGC GTCAACGTCTGCTGCGGTGGCGACACCCGCGCCGGTGTACGGATGGGTGA GAGGGGGGAAGTGTTGCCACCATGTCTTGGAATTAGTCTCGAGGTTTGCC TTCGACGAGATCCCTTGCGCCAGGCCGTTGTTGCAGGATTCCCTGACGTT TGACGGAGTGTATTGTCCATGACGGCACATTGCGTCGTGTGTAGTTGCCT GCATTCGATCATGTGCCTAAAACTTTCTTGTCTAGCCTGTTTCCCACAAG GGAACATGCCGCTGTAACGGCAGAAATAAACGTTGGTCACTACAATACAA TACTTTGCACTCAGTGTTAATCTATGTACCGCGGACTCTTATCCGTGGAA GAGATAGATCTCTTGTGTTATTTGTACGAAAAAACAATGAATTTGCCTTC CCCTGTGGGATCCTTTCTCTCGCCTCGGTCCGACTTTGGTTCATGTGCTC CTCCCCATTGTATTTTGCTTCTGACGAATGACTGCGCCTTTCCGAACCCA GGTTTACGACCCGGCCACGGGAACTTACACTGCCGCCCCAGCGGCCGCGG CCCCAGCCCCTCAAGCGTCGTCTTTCAATGCCCAACCCCAGTACACCCAG CAGCAGCAGCAGCAGCAGCAACAACAGCCGCAGCGTTAA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig134:38360..50148+

>mRNA_E-siliculosus-1a_F_contig134.2049.1 ID=mRNA_E-siliculosus-1a_F_contig134.2049.1|Name=mRNA_E-siliculosus-1a_F_contig134.2049.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6048bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig134:38360..50148+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTGACATTTGCACTCCCCTACTACTTTCGAACGAACGGAAAGAGGGGGTC
TTGGCGTCGTCAACTTTTCGCGGGAGCAGGAGAGGAAGGCAGGCATCATC
TCACCGGTATCTACGTTCGGAGCGGTGTTGCGAGGTTGCGAGTTGACATT
TGCACTCCCCTACTACTTTCGAACGAACGGAAAGAGGGGGTCTTGGCGTC
GTCAACTTTTCGCGGGAGCAGGAGAGGAAGGCAGGCATCATCTCACCGGT
ATCTACGTTCGGAGCGGTGTTGCGAGGTTGCGAGGTCAGCGCATTCTCCC
CAACAGCAGTCAAGACCCTCTCTCTCGTCAACCTTCTGTAAGCATGACTC
CCCCTGCGGCGAAGAGGAGGCGTTCGGTGGATCACCACGAGTCCGTCAGG
AACATCACGGTGGTGAAGGGAGGCCTAAGCATCATGTGTCCGTCGGTCAG
CGCATTCTCCCCAACAGCAGTCAAGACCCTCTCTCTCGTCAACCTTCTGT
AAGCATGACTCCCCCTGCGGCGAAGAGGAGGCGTTCGGTGGATCACCACG
AGTCCGTCAGGAACATCACGGTGGTGAAGGGAGGCCTAAGCATCATGTGT
CCGTCGGACGCCATGGGCATGCTCATCGGCAAGGGAGGCTCTGGCCTGCG
CGAGATGCAGGAAAAGACCGGGGTGAAGGACGCCATGGGCATGCTCATCG
GCAAGGGAGGCTCTGGCCTGCGCGAGATGCAGGAAAAGACCGGGGTGAAG
GTGTCTCTCCAGGAGACCAAGTCAATCCCCGAGGGCGCCAAGGAGCGCGG
GGTCGGTCTCTCGGGATCCCTGGACTGCGTGGCCAACGTCGAGAAGCTCA
TCTTCGAGAAGCTCAACGCGCGCAGAGTCACGAGCCTCGCGCCCTCCCCC
GCCGAGGTGTCTCTCCAGGAGACCAAGTCAATCCCCGAGGGCGCCAAGGA
GCGCGGGGTCGGTCTCTCGGGATCCCTGGACTGCGTGGCCAACGTCGAGA
AGCTCATCTTCGAGAAGCTCAACGCGCGCAGAGTCACGAGCCTCGCGCCC
TCCCCCGCCGAGGAGGAGTTCGAGATGGCCTACGAGGCGGCTAAGGCCGC
GGGCATCGAGCCGAACGGGGTCGCGGACGTGGGCGACATGAACGACCCCA
ACAAGATCACGGTCGTGCGCTGGATCATGGACAACGCGCACTGCGGGTGG
CTCATCGGGAAGGGCGGCAGCGGCATCCAGAACATCGAGGAGGAGTTCGA
GATGGCCTACGAGGCGGCTAAGGCCGCGGGCATCGAGCCGAACGGGGTCG
CGGACGTGGGCGACATGAACGACCCCAACAAGATCACGGTCGTGCGCTGG
ATCATGGACAACGCGCACTGCGGGTGGCTCATCGGGAAGGGCGGCAGCGG
CATCCAGAACATCGAGGCCACCTCGGGAGCGCAGGTGCGTGTTGCCACGG
AACGGAGCCTGGGCAAGGACTCCGCCGAGCGCATCGTGTACGTGAAGGGC
AACAAGGCTCAGCGAGAGGCCGCCCTCGAGCTCATCCGGACCAACCCAAA
GGCCACCTCGGGAGCGCAGGTGCGTGTTGCCACGGAACGGAGCCTGGGCA
AGGACTCCGCCGAGCGCATCGTGTACGTGAAGGGCAACAAGGCTCAGCGA
GAGGCCGCCCTCGAGCTCATCCGGACCAACCCAAAGATCACCGGGCGTGT
CGCCTCCCCCACGGAGCCGGAGGTTGCGGCCGTGCACGTGCCCTCGAAGG
CCGTCGGGTTCATCCTGGGGCACCGCGGTGCGTCGATCCAGGCCCTCACG
GAAAAGACGGGGGCCCAGCTCCGCGTCGCCTCCGGGAGCGAGGTCACCAC
CGGCGGCGGCGAGCACAGGATCACCGGGCGTGTCGCCTCCCCCACGGAGC
CGGAGGTTGCGGCCGTGCACGTGCCCTCGAAGGCCGTCGGGTTCATCCTG
GGGCACCGCGGTGCGTCGATCCAGGCCCTCACGGAAAAGACGGGGGCCCA
GCTCCGCGTCGCCTCCGGGAGCGAGGTCACCACCGGCGGCGGCGAGCACA
GGGTGGACATCACGGGAGGCCCCAAGCAGATCGTCGCTGCCCGCCACGCC
CTCCAAGATCGCGTGGCGGAGTGGAGGACGAGCAACAACCCGAACGGCGA
GCCCGAGGAGCCGGAGTACACCCTCAAGGTGGACATCACGGGAGGCCCCA
AGCAGATCGTCGCTGCCCGCCACGCCCTCCAAGATCGCGTGGCGGAGTGG
AGGACGAGCAACAACCCGAACGGCGAGCCCGAGGAGCCGGAGTACACCCT
CAAGGTCGCCGTGCCCCAGCCCCTGGTGGGCCACATCATCGGCAAGGGAG
GAACATTCGTGAGGGAGGTCCTGTCCGTCACCAACGTGCAGGCAAGTGTC
GCCGTGCCCCAGCCCCTGGTGGGCCACATCATCGGCAAGGGAGGAACATT
CGTGAGGGAGGTCCTGTCCGTCACCAACGTGCAGGCAAGTATCCAGCAGG
ACACGGGGTCTCCGACGATGTGGGGTGACGCGTGCTGCGTGATGCTGTCG
GGCACCTTTGGCAACGTCGTGAAGGCCCAGCGGATGATCTTGGAAAGGAT
CGCCAACACCAGCGACCGTCTGAAGGAGATGATCCAGCAGGACACGGGGT
CTCCGACGATGTGGGGTGACGCGTGCTGCGTGATGCTGTCGGGCACCTTT
GGCAACGTCGTGAAGGCCCAGCGGATGATCTTGGAAAGGATCGCCAACAC
CAGCGACCGTCTGAAGGAGATGGTGCCCAACGCCGTGAACATCCTTGAAA
ACCATGACCCTTCGGATGAGATGAAGAGGGTGGAGGTGAACATTCAGCTC
CCCGACGGACCCCCGCCGGTGCAGGCCCCTGTCGGCTTCCAGGTGCCCAA
CGCCGTGAACATCCTTGAAAACCATGACCCTTCGGATGAGATGAAGAGGG
TGGAGGTGAACATTCAGCTCCCCGACGGACCCCCGCCGGTGCAGGCCCCT
GTCGGCTTCCAGCAACCCCCGCCGTTCGGCCAGCAGCCTCCCCCGTACGG
GTTTGGCGCCTCCCCCCAGTTCGGAGGCCAGCCCCCCCGCCCGGGCCCCA
ACATGCAACCCCCGCCGTTCGGCCAGCAGCCTCCCCCGTACGGGTTTGGC
GCCTCCCCCCAGTTCGGAGGCCAGCCCCCCCGCCCGGGCCCCAACATGGG
CCAGCCACCGTTCCAGCAGCAGCAGCAGCAGGCGCCCTTCCAGCAACAGC
AGTTCCAGAGCGGCGGGCCTCCCCCGCAGCAGCGTGGCCCTCCTCGCGGC
AGGGCTGACTTGCCTCCGGTGGAAAACATCACGGGCCAGCCACCGTTCCA
GCAGCAGCAGCAGCAGGCGCCCTTCCAGCAACAGCAGTTCCAGAGCGGCG
GGCCTCCCCCGCAGCAGCGTGGCCCTCCTCGCGGCAGGGCTGACTTGCCT
CCGGTGGAAAACATCACGTTTACTTCCATCCGCCAGCTTAACGCGCCAGG
CCTTACGAGCGCGTCGAAGCAGCCGGGAGGTGTGCTGATGCTGGTGGACA
ACTCCGTGGTGGGGTCGATCATCGGCAAGGGAGGTCAAACCATCCGCAAG
ATCTCCCTGGAGAGCGGGTCCTCCATCCAGGTTCAGGGCCGTGATGAGCA
GTCCCCCAGCCAGCTCGAGCGCCGGGTTACCATCACCTCGTTTACTTCCA
TCCGCCAGCTTAACGCGCCAGGCCTTACGAGCGCGTCGAAGCAGCCGGGA
GGTGTGCTGATGCTGGTGGACAACTCCGTGGTGGGGTCGATCATCGGCAA
GGGAGGTCAAACCATCCGCAAGATCTCCCTGGAGAGCGGGTCCTCCATCC
AGGTTCAGGGCCGTGATGAGCAGTCCCCCAGCCAGCTCGAGCGCCGGGTT
ACCATCACCTCGGACGAGATGCCGGTTCTCATGAAGGCCGCCAACATGAT
CTGCGCAGTCCTGAGGAACGGCGAGCGTCTCGCCGCTGCCGCCCGCGAGG
CGGCCGGAGGCGGCCGTGGCGACCGCGGCCCACCCGGCAGCAACGGCAGC
GGTGGCGGTGGTGGAGGCGACCGCAACCGCGGGGGCCCTGCGCCGTACAA
CCCTGCGGGCCCCCCTCAGTCTGCACAGCCGCAGCCCACCGCGGCCCCCG
TGAACTACCAGTACCAGCAGGCGCCGCCGGACGAGATGCCGGTTCTCATG
AAGGCCGCCAACATGATCTGCGCAGTCCTGAGGAACGGCGAGCGTCTCGC
CGCTGCCGCCCGCGAGGCGGCCGGAGGCGGCCGTGGCGACCGCGGCCCAC
CCGGCAGCAACGGCAGCGGTGGCGGTGGTGGAGGCGACCGCAACCGCGGG
GGCCCTGCGCCGTACAACCCTGCGGGCCCCCCTCAGTCTGCACAGCCGCA
GCCCACCGCGGCCCCCGTGAACTACCAGTACCAGCAGGCGCCGCCGCAAC
AGCAGAACGTCCAGTACGCCCCAGCGCCGGCCATGCAATCCACCTACCCC
GCTCAACAGCAGGGGTTCGTTGCCCTCCAGGCGGCACCGGGGGCTCCTAT
CCAGCAGCAACAGCAGAACGTCCAGTACGCCCCAGCGCCGGCCATGCAAT
CCACCTACCCCGCTCAACAGCAGGGGTTCGTTGCCCTCCAGGCGGCACCG
GGGGCTCCTATCCAGCAGGCGTACCAGCAGTACCCAGGGCAGCAGGTGCA
GCCCCAGAACCCGGGACAACAGCAACAGCTCGCCCCGCAAGGCGTTCCGC
AGCAGCAGCAGCAGGCGCCCCCCGCCCAGGGCGCCGCGGGTCAGTACGCC
CCGCAGCAGCAGCAGCAGCAGCAGCCGCCGCAGGCTCAGCAGGCACCGCA
GGCTCAGCAGCAGCAACCGGCTGCTGTGTTTTACCAGCAGGCGTACCAGC
AGTACCCAGGGCAGCAGGTGCAGCCCCAGAACCCGGGACAACAGCAACAG
CTCGCCCCGCAAGGCGTTCCGCAGCAGCAGCAGCAGGCGCCCCCCGCCCA
GGGCGCCGCGGGTCAGTACGCCCCGCAGCAGCAGCAGCAGCAGCAGCCGC
CGCAGGCTCAGCAGGCACCGCAGGCTCAGCAGCAGCAACCGGCTGCTGTG
TTTTACCAGCAGCCTGCGGGTGGCACCCCTTCTCAAGGCGGCCCGCAGGC
AATTCAGTATGCGCAGGTCCAGCAGCCGCAGCAACAGCAGCAGCTGGGAC
AGCCGCAGCAGCCGCAGCAACAGCAGGGCCTTATGCAGCAGCAGCAACAG
CCGCAGCAGCAGCAGCAGCAGCCGCCGCAGCAGCAGCAGCCGCAGCAGCA
GCAACAGCAGCAGCAGCAACAGCAGCAGCAGCTGCCGGTGCAGCAGCTTC
CGCTGCAAAACCAGCAGGGGCAGCAGCAGGGGCAGCAGCCAGTAGCGTCA
ACGTCTGCTGCGGTGGCGACACCCGCGCCGGTGTACGGATGGCCTGCGGG
TGGCACCCCTTCTCAAGGCGGCCCGCAGGCAATTCAGTATGCGCAGGTCC
AGCAGCCGCAGCAACAGCAGCAGCTGGGACAGCCGCAGCAGCCGCAGCAA
CAGCAGGGCCTTATGCAGCAGCAGCAACAGCCGCAGCAGCAGCAGCAGCA
GCCGCCGCAGCAGCAGCAGCCGCAGCAGCAGCAACAGCAGCAGCAGCAAC
AGCAGCAGCAGCTGCCGGTGCAGCAGCTTCCGCTGCAAAACCAGCAGGGG
CAGCAGCAGGGGCAGCAGCCAGTAGCGTCAACGTCTGCTGCGGTGGCGAC
ACCCGCGCCGGTGTACGGATGGGTTTACGACCCGGCCACGGGAACTTACA
CTGCCGCCCCAGCGGCCGCGGCCCCAGCCCCTCAAGCGTCGTCTTTCAAT
GCCCAACCCCAGTACACCCAGCAGCAGCAGCAGCAGCAGCAACAACAGCC
GCAGCGTTAAGTTTACGACCCGGCCACGGGAACTTACACTGCCGCCCCAG
CGGCCGCGGCCCCAGCCCCTCAAGCGTCGTCTTTCAATGCCCAACCCCAG
TACACCCAGCAGCAGCAGCAGCAGCAGCAACAACAGCCGCAGCGTTAA
back to top