mRNA_E-siliculosus-1a_F_contig134.2046.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: A0A6H5JVG6_9PHAE (TP_methylase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG6_9PHAE) HSP 1 Score: 843 bits (2178), Expect = 6.450e-303 Identity = 487/554 (87.91%), Postives = 499/554 (90.07%), Query Frame = 2
Query: 290 MQRRGRYGLAAVISVVLSLTEIIMAETGRCLMSAARTTRSTRYGRAAAFAFSPGVSPSTSTGAQFRHVRLRQEPVHSAPWHLLHPHCCFSSRGISDNAGGGGAFPPATSKWSSS-RSRDLHLGKIGSSGGGGAPGYGTRSRCGQASRLSSAXXXXXXXXXXXQEGTSPXXXXXXXXX-ASGRPGQVAEQGLVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRRPVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGG--TSDAASGMGSVGGDXXXXXXVVRDPRGEFTVVLGPRAAAVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLNLKKSDVYRVALSLQPSSVQKDD 1939
MQ RGR GLAAVI VVL LTEIIMAETGRCL+SAARTTRSTR+GRAAAFAFSPGVSPSTSTGA+ HV LRQ+PVHSAPW LL+PHCCFSSRGISDNAGGGGAFPPATSKWSSS RSRDL LGKIGS GGGAPGYG R RCGQAS LSSA QEGTSPXXXXXXXXX AS RPGQVAE G+VYFVSTPIGNLEDITLRAMNILRTA+VIAAEDTRTTGSLLKLLGVER+GRLVSHHDHNTKRRVPEIV+AARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKL EIAQEPRTCIMYESPHRIADTL LLKASCPPPSE LD RSGTDSGGS+EGNETP SSEA LAAG RPVVLARELTKLHEDIFRGTLAEAVARYGG G P+REGE R G TSD ASGM XXXX VVR PRGEFTVVLGPRAAAVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLNLKKSDVYRVALSLQPSSV+KDD
Sbjct: 1 MQPRGRCGLAAVIIVVLPLTEIIMAETGRCLVSAARTTRSTRHGRAAAFAFSPGVSPSTSTGARRCHVTLRQKPVHSAPWRLLNPHCCFSSRGISDNAGGGGAFPPATSKWSSSPRSRDLPLGKIGSGSGGGAPGYGHRPRCGQASSLSSASQSADDANASEQEGTSPXXXXXXXXXXASRRPGQVAEPGVVYFVSTPIGNLEDITLRAMNILRTAEVIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTKRRVPEIVQAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLAEIAQEPRTCIMYESPHRIADTLGALLKASCPPPSEALDSRSGTDSGGSREGNETPVSSEAWLAAGCRPVVLARELTKLHEDIFRGTLAEAVARYGGSGGVPSREGERRDGDCETSDGASGM-XXXXXXXXXDGVVRGPRGEFTVVLGPRAAAVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLNLKKSDVYRVALSLQPSSVEKDD 553
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: D8LLL3_ECTSI (TP_methylase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL3_ECTSI) HSP 1 Score: 842 bits (2175), Expect = 1.990e-302 Identity = 481/564 (85.28%), Postives = 490/564 (86.88%), Query Frame = 2
Query: 290 MQRRGRYGLAAVISVVLSLTEIIMAETGRCLMSAARTTRSTRYGRAAAFAFSPGVSPSTSTGAQFRHVRLRQEPVHSAPWHLLHPHCCFSSRGISDNAGGGGAFPPATSKWSSSRSRDLHLGKIGSSGGGGAPGYGTRSRCGQASRLSSAXXXXXXXXXXXQEGTSPXXXXXXXXXA-SGRPGQVAEQGLVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRR-----------PVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGGTSDAASGMGS--VGGDXXXXXXVVRDPRGEFTVVLGPRAAAVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLNLKKSDVYRVALSLQPSSVQKDD 1939
MQRRGRYGLAAV VVLSLTEIIMAETGRCLMSAART STR GRAAAFAFS GVSPS+ST AQ RHVRLRQ PVHSAPW LL+PHCCFSSR ISDNAGGGGAFPPATSKWSSSR RDLHLGKIGSS GGGAPGYG R+RCGQA LSS QEG SP XXX S RPGQVAE G+VYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKL EIAQEPRTCIMYESPHRIADTL GLLKASCPPPSE + GRSGTDSGG EGNET ASSEAQLAAGRR PVVLARELTKLHEDIFRGTLAEAVARYGGGDG PAREGEGR G SD ASGMGS GD VVRDPRGEFTVVLGPRAAAVGAGE G+ARALEALEARLTELTAGGMSTSSAVKM SKDLNLKKSDVYRVALSL+PSSV++DD
Sbjct: 1 MQRRGRYGLAAVTVVVLSLTEIIMAETGRCLMSAART-HSTRQGRAAAFAFSSGVSPSSSTDAQRRHVRLRQGPVHSAPWRLLNPHCCFSSRSISDNAGGGGAFPPATSKWSSSRGRDLHLGKIGSSSGGGAPGYGNRARCGQAWSLSSTSQSAGE-----QEGASPTATTAAXXXXXSTRPGQVAEPGMVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLAEIAQEPRTCIMYESPHRIADTLGGLLKASCPPPSEHVGGRSGTDSGGPHEGNETTASSEAQLAAGRRGGAEGMRFFQWPVVLARELTKLHEDIFRGTLAEAVARYGGGDGVPAREGEGRDGVPSDGASGMGSGXXXGDG-----VVRDPRGEFTVVLGPRAAAVGAGEEGQARALEALEARLTELTAGGMSTSSAVKMVSKDLNLKKSDVYRVALSLRPSSVKEDD 553
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: A0A6V1TAB6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TAB6_HETAK) HSP 1 Score: 251 bits (641), Expect = 2.410e-73 Identity = 166/367 (45.23%), Postives = 208/367 (56.68%), Query Frame = 2
Query: 833 GQVAEQGLVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARG-GKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRRPVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGGTSDAASGMGSVGGDXXXXXXVVRDPRGEFTVVLGPRAAAVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLN-LKKSDVYRVALSLQPSSV 1927
G A+ G VYFV+TPIGNL DIT RA ILRT D++A+EDTR TG LL+ L +K R +SHH+HN K RVP+++ AR G+S+AVVSDAGTPGI+DPG LA ACA G+ +P+PG CAA AA+SVAG + E+VFFGF+ KRG+A R KL E+ +E RT + YE+PHR+ TLR +++ S AAGRR +V ARELTKLHE FRGT+ EA A + S G+ PRGEFTVVLGP GE A A RL EL A G+STS AVK +++ LKK++VY +AL L V
Sbjct: 106 GSKAQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKK-RQISHHEHNWKGRVPQLIALAREEGRSIAVVSDAGTPGIADPGTPLARACAEAGVPAIPIPGPCAAAAALSVAGVYASEYVFFGFLPAKRGTA-RTAKLREVLEERRTSVFYEAPHRLEHTLREMVEISA-------------------------------AAAGRREIVCARELTKLHESFFRGTVQEAWAHF----------------------SAPGTA-------------PRGEFTVVLGPLEEEAPDGEAAAALATR----RLRELMAEGVSTSRAVKAVVQEVKGLKKAEVYNLALELSGDGV 400
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: A0A4D9CZ36_9STRA (TP_methylase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ36_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.140e-71 Identity = 164/360 (45.56%), Postives = 210/360 (58.33%), Query Frame = 2
Query: 851 GLVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGK-SVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRRPVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGGTSDAASGMGSVGGDXXXXXXVVRDPRGEFTVVLGPRAAAVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLN----LKKSDVYRVALSLQ 1915
G +YFVSTP+GNL DITLRA+++LR D+IA+EDTRTTG LLK LG+ +K + VSHH HN + RVP+++ A+ + S+AVVSDAGTPG+SDPG ELAAAC G+ +VPVPGACAAVAA+S+AGFPS EF F GF+ + G VR+ ++ + A+E R CI+YESP+RI TL L EA G R V++ARELTKLHED++RGTL EA+A +GG D G S A + RGEFT+VLGPR + E L A L E GMS S A K SK L L KSD+Y++A+ ++
Sbjct: 3 GTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQ-VSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISIAGFPSTEFTFIGFLPSRSGK-VRQAEVAKAAREERPCILYESPNRILRTLTELR--------------------------------EADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKD----------EQGVSVEAGAFAPL--------------RGEFTLVLGPRPRVARSQEEVSIAVRAMLWACLEE---DGMSASEAAKAVSKALGKEARLAKSDMYKLAVEMK 301
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: W7TJ55_9STRA (Tetrapyrrole methylase family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ55_9STRA) HSP 1 Score: 245 bits (625), Expect = 9.930e-71 Identity = 165/360 (45.83%), Postives = 211/360 (58.61%), Query Frame = 2
Query: 851 GLVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGK-SVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRRPVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGGTSDAASGMGSVGGDXXXXXXVVRDPRGEFTVVLGPRAAAVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLN----LKKSDVYRVALSLQ 1915
G +YFVSTP+GNL DITLRA+++LR D+IA+EDTRTTG LLK LG+ +K + VSHH HN + RVP+++ A+ + S+AVVSDAGTPG+SDPG ELAAAC G+ +VPVPGACAAVAA+SVAGFPS EF F GF+ + G VR+ ++ + A+E R CI+YESP+RI TL L EA G R V++ARELTKLHED++RGTL EA+A +GG + G S A + RGEFT+VLGPR + E L A L E GMS S A K ASK L L KSD+Y++A+ ++
Sbjct: 135 GTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQ-VSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGK-VRQAEVAKAAREERPCILYESPNRILRTLTELR--------------------------------EADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKE----------EQGVSVEAGAFAPL--------------RGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEE---DGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMK 433
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: A0A835ZCH8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH8_9STRA) HSP 1 Score: 230 bits (586), Expect = 7.410e-66 Identity = 165/393 (41.98%), Postives = 209/393 (53.18%), Query Frame = 2
Query: 911 MNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAAR----------------------------------------------------------GGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRRPVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGGTSDAASGMGSVGGDXXXXXXVVRDPRGEFTVVLGPRAA-AVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLNLKKSDVYRVALSL 1912
MNILRTAD++A EDTR TG LL+LLG+ R GR++SHH HNT+ RVPE+++AA+ G+SVAVVSDAGTPGISDPG+ELAAACA G+RVVPVPGACAAVAAVSV+G E+VF GF+ +RG+A R R L +A EPR ++YE+PHR+ DTLR L A+ G G ++ A LA RP + ARELTK HE+++RGT+ A+ +GG + G+V RGEFT+VL R AVGA E A EA+ ARL EL GGM+ SSAVK+ ++DL +KS VY +A L
Sbjct: 1 MNILRTADILATEDTRHTGRLLQLLGISRSGRMLSHHQHNTRTRVPELIDAAKPCPAHTSRHHLGETAPAIHLRPPTPPHQHHQHAGTPKTMTPHPAHVRTLSLAPTVTPQAGESVAVVSDAGTPGISDPGVELAAACADAGVRVVPVPGACAAVAAVSVSGLAPAEWVFVGFLPARRGAA-RARALAALAAEPRAAVLYEAPHRLLDTLRELADAA---------GXXXXXXAGDRD---------AVLA---RPALFARELTKQHEELYRGTVGSALEHFGGXX---------XXXXXXXXTAARGAV--------------RGEFTIVLAARVERAVGAAE-----AQEAMAARLLELRRGGMTASSAVKLVARDLGARKSVVYALATQL 343
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: A0A8J5XH93_DIALT (TP_methylase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XH93_DIALT) HSP 1 Score: 230 bits (586), Expect = 1.450e-65 Identity = 163/361 (45.15%), Postives = 201/361 (55.68%), Query Frame = 2
Query: 836 QVAEQGLVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARG-GKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRRPVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGGTSDAASGMGSVGGDXXXXXXVVRDPRGEFTVVLGPRAAAVGAGEGGEARALEALE-ARLTELTAGGMSTSSAVKMASKDLNLKKSDVYRVALSL 1912
+ A +G VYFV+TPIG+L+DITLRA+ +LR ADVIAAEDTR TG LL G+ K +LVSHH+HN VPE+V AR G+++A+VSDAGTPGISDPG LAAAC G+ VVP+PGACAAVAA+SVAG E+VFFGFV A RRR L +A EPR C++YE+PHR+ TL GL D AG R V+ ARELTKLHE++FRGTL A+A Y +D +G+ RGEFT+VL P AA GE A + L A L E A G S+AV+ + K +VY AL+L
Sbjct: 68 RAAARGTVYFVATPIGHLDDITLRALRVLRDADVIAAEDTRRTGVLLAHHGISAK-KLVSHHEHNAHASVPELVRRARDEGEAIALVSDAGTPGISDPGARLAAACVEAGVPVVPLPGACAAVAALSVAGALG-EWVFFGFVPAT--GAERRRALARVAAEPRACVLYEAPHRLLSTLSGLAARG--------DXXXXXXXXXXXXXXXXXXXXXXXXXAGARGVLCARELTKLHEELFRGTLDGALAHY------------------ADGGAGV----------------LRGEFTLVLLPDAALAARGEADADEARDRLAGALLAEHAAAGARLSAAVRDVCERTGAPKREVYARALAL 382
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: A0A0M0JQE6_9EUKA (Ribosomal RNA small subunit methyltransferase i n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQE6_9EUKA) HSP 1 Score: 213 bits (543), Expect = 3.810e-60 Identity = 153/364 (42.03%), Postives = 195/364 (53.57%), Query Frame = 2
Query: 833 GQVAEQGLVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRRPVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGGTSDAASGMGSVGGDXXXXXXVVRDPRGEFTVVLGPRAAAVGAGEGGEA------RALEALEARLTELTAGGMSTSSAVKMASKDLNLKKSDVYRVAL 1906
G E +Y+V+TPIGNLEDITLRA+ LR DV+A EDTR T LL+ L + K +LV+HHDHN VP+++E GG SVAVVSDAGTPGISDPG+ LAA CA + +VPVPGACAAVAA+SV+GF S EF+F GF+ R + R+ ++ E+ E R ++YE+PHR+ DTL L A AG R VV+ARE+TKLHE+ RGT+A A A Y + A G + RGEF VV+ P AA GEA RA EA+ ARL A G + S VK A+ + + K+ +Y AL
Sbjct: 23 GAPIEARTLYYVATPIGNLEDITLRAVRTLREVDVVATEDTRVTLGLLRHLHIGPK-KLVAHHDHNLASSVPKLIELLEGGASVAVVSDAGTPGISDPGLALAAECARRSIPIVPVPGACAAVAAISVSGFVSTEFIFGGFLP--RSGSGRKARIAEMVGERRAVVLYEAPHRMLDTLGDLKMAG----------------------------------AGGRGVVVAREMTKLHEEFHRGTIASAHAWY------------------AAIAERDGKL--------------RGEFAVVIAPLDAATLEQREGEAAAVAEERATEAVRARL----AAGGALSRVVKEAALEFGVPKAKLYAEAL 313
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: A0A7S4FCJ4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCJ4_CHRCT) HSP 1 Score: 220 bits (560), Expect = 3.880e-60 Identity = 154/371 (41.51%), Postives = 204/371 (54.99%), Query Frame = 2
Query: 821 SGRPGQVAEQGLVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRRPVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGGTSDAASGMGSVGGDXXXXXXVVRDPRGEFTVVLGP------RAAAVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLNLKKSDVYRVALSLQ 1915
S R G VYFVSTPIGNLEDITLRA+ LR DV+A+EDTR T LL+ LGV +K LVSHH+HNT+ +P++++ A G S+AVVSDAGTPGISDPGMELAA CAA + +VPVPGACAA+AA+S++G+ + EF F GF+ R RR+++ E+AQEPR I+YE+PHR+ TL+ L A A R + ARE+TKLHE + RGT+++ ++ + EG+ R RGEFT+V+ P RA A E A +A+ ARL A G S S AVK + +L +K+S Y + L +Q
Sbjct: 224 SERMSSTVRPGHVYFVSTPIGNLEDITLRAVRTLRQVDVVASEDTRHTSRLLRHLGVGKK-LLVSHHEHNTRAAIPKLLQYAAQGLSIAVVSDAGTPGISDPGMELAAECAAASVPLVPVPGACAAIAALSISGYANTEFCFGGFLP--RAGKARRQRVVELAQEPRAVILYEAPHRLLSTLQDLCDAG----------------------------------ASARQCLCAREITKLHEQVERGTVSQLLSAFR-----RVEEGDERI---------------------------RGEFTLVVAPVSDDELRARAEAEQERRADSAEDAVRARL----ARGESLSRAVKQVAAELMIKRSVAYDLGLRIQ 521
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Match: A0A1Z4QDH3_9NOST (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Cylindrospermum sp. NIES-4074 TaxID=2005457 RepID=A0A1Z4QDH3_9NOST) HSP 1 Score: 212 bits (539), Expect = 4.320e-60 Identity = 140/358 (39.11%), Postives = 191/358 (53.35%), Query Frame = 2
Query: 851 GLVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLEEIAQEPRTCIMYESPHRIADTLRGLLKASCPPPSECLDGRSGTDSGGSQEGNETPASSEAQLAAGRRPVVLARELTKLHEDIFRGTLAEAVARYGGGDGGPAREGEGRHGGTSDAASGMGSVGGDXXXXXXVVRDPRGEFTVVLGPRAAAVGAGEGGEARALEALEARLTELTAGGMSTSSAVKMASKDLNLKKSDVYRVALSLQPSS 1924
G +Y V TPIGNLED+T RA+ IL+T D+IAAEDTR TG LL+ V K VS+H+HN+ R+PEI+E GK++A+VSDAG PGISDPG EL AC G+ VVP+PGA AA+ A+S AG P+ F+F GF+ K + RR LE + EPRT I YESPHR+ DTL+ L ++ R +VLARELTKL+E+ +RGT+A+A+A Y R+P+GE+T+VL G E L+A L +L G+S S A + +K+ +L + +Y++AL++ SS
Sbjct: 8 GTLYVVGTPIGNLEDMTFRAVRILQTVDLIAAEDTRHTGKLLQHFQV--KTPQVSYHEHNSSTRIPEILEQLVNGKAIALVSDAGMPGISDPGYELVKACVEAGITVVPIPGASAAITALSAAGLPTDRFIFEGFLPAK--TQQRREHLESLQAEPRTLIFYESPHRLRDTLQDL----------------------------------GEVWGSDRQIVLARELTKLYEEFWRGTIADAIAHYN-------------------------------------QREPQGEYTLVL------AGTPPSQPHLTEEQLKAELLQLMKQGISRSQASRQLAKETSLPRRHLYQLALAIVMSS 284 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig134.2046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig134.2046.1 >prot_E-siliculosus-1a_F_contig134.2046.1 ID=prot_E-siliculosus-1a_F_contig134.2046.1|Name=mRNA_E-siliculosus-1a_F_contig134.2046.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=552bp MQRRGRYGLAAVISVVLSLTEIIMAETGRCLMSAARTTRSTRYGRAAAFAback to top mRNA from alignment at E-siliculosus-1a_F_contig134:20552..27641- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig134.2046.1 ID=mRNA_E-siliculosus-1a_F_contig134.2046.1|Name=mRNA_E-siliculosus-1a_F_contig134.2046.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7090bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig134:20552..27641- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig134:20552..27641- >mRNA_E-siliculosus-1a_F_contig134.2046.1 ID=mRNA_E-siliculosus-1a_F_contig134.2046.1|Name=mRNA_E-siliculosus-1a_F_contig134.2046.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3312bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig134:20552..27641- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |