mRNA_E-siliculosus-1a_F_contig134.2044.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig134.2044.1
Unique NamemRNA_E-siliculosus-1a_F_contig134.2044.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: D8LLL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL5_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 3.900e-148
Identity = 221/229 (96.51%), Postives = 225/229 (98.25%), Query Frame = 3 
Query:  231 MDETPKTDPLGGG--SLSSQPDVELRVQPRPQPCSLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVERAT 911
            MDETPKTDPLGGG  SLSSQPDVEL+VQPRP+PCSLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYS RSVKTLSALCVTNLD GRAAEGVHESTV+WREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPV+LLCTLVERAT
Sbjct:    1 MDETPKTDPLGGGGSSLSSQPDVELQVQPRPKPCSLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSCRSVKTLSALCVTNLDNGRAAEGVHESTVAWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVELLCTLVERAT 229
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: A0A7S2XZD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZD4_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.400e-51
Identity = 96/205 (46.83%), Postives = 140/205 (68.29%), Query Frame = 3 
Query:  297 LRVQPRPQP-CSLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLD-KPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 905
            +R + RPQP   +PI+LGSSS  R++++ + GW+FS  SPD+DEKAIR  +P ++   I+R K  AL  R+   P++LI +DQV  F         +REKPE+ ++A+A+L SYS  SV T+S + VTN  +G++AEGV  +TV W  ISP V++ V+ARG +M SAGGF +E+  L  LV  I+G+ DSVLGLP+ L+C L+++
Sbjct:    6 VRFETRPQPQTEIPIILGSSSTNRKQVLQTAGWDFSCMSPDIDEKAIRCENPEELVILISRGKTEALLPRVTGSPSILICSDQVVSFQGT------IREKPENEDQARAYLSSYSGNSVSTVSGVMVTNTGSGKSAEGVDVATVHWDTISPEVIERVVARGEIMTSAGGFRIEDVDLSPLVKNIQGTKDSVLGLPLALVCDLIDQ 204
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: A0A0G1WSY9_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Parcubacteria group bacterium GW2011_GWA2_51_12 TaxID=1618856 RepID=A0A0G1WSY9_9BACT)

HSP 1 Score: 147 bits (370), Expect = 2.360e-38
Identity = 84/193 (43.52%), Postives = 121/193 (62.69%), Query Frame = 3 
Query:  336 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVERATA 914
            I+LGS S  R  I+   G+EF    P++DEKAIR  DP+K+ A +ARAK  AL  ++   A+LIT+DQV  F EG     ++REKPE+  EA+ FL +    + +T +A+ VTN  TG+ A G+  + V +++I PAV++D I+ G     AGGFA E P L   +  +EG +DS+LGLP++L   L+E  TA
Sbjct:    3 IILGSQSKNRADILQEAGFEFDVLPPNIDEKAIRSSDPKKLPALLARAKTDALLPKISGEALLITSDQVVSF-EG-----QIREKPETEAEARKFLETGHESANETYTAVEVTNTSTGKRASGLDIARVFFKKIPPAVINDFISSGEPFSHAGGFAAESPLLAPYIVGVEGEMDSILGLPMNLTRALIEEVTA 189
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: A0A1G2MS12_9BACT (7-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13 TaxID=1802312 RepID=A0A1G2MS12_9BACT)

HSP 1 Score: 145 bits (367), Expect = 6.260e-38
Identity = 76/190 (40.00%), Postives = 125/190 (65.79%), Query Frame = 3 
Query:  336 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 905
            I+LGS+S +R+ ++D++G+E+   SPD+DEKAIR  DP K+   +A AKA+AL  ++ +PA++IT DQV +++       ++REKP++ +EA  FL SY     +T SA+ VTN   G+ A GV  + V ++ I   ++D+V+ +G +  +AGG  +E+  L   +++I+G+VDS+ GLP  LL  L+E 
Sbjct:    3 IILGSASKWRKGVIDTMGFEYEVMSPDIDEKAIRLRDPDKLVLALAEAKAKALLTKVKEPALIITGDQVVVWNG------QIREKPQNEKEAGYFLESYCEHPAETHSAVMVTNTANGKHAMGVDVARVYFKNIPKEIIDEVVKKGAIYTTAGGIQMEDALLAPYIERIDGTVDSLKGLPKALLTKLMEE 186
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: A0A2M7XEA1_9BACT (7-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Uhrbacteria bacterium CG_4_9_14_3_um_filter_50_9 TaxID=1975035 RepID=A0A2M7XEA1_9BACT)

HSP 1 Score: 145 bits (367), Expect = 9.420e-38
Identity = 77/193 (39.90%), Postives = 123/193 (63.73%), Query Frame = 3 
Query:  327 SLPIVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 905
            +L I+LGSSS +R+R+   +   F + SPD+DEK IRD DP+ +   IA AKA AL  ++ +PAVL+TADQ+ + + GH     VREKP   EE +AFL SY+ + V+ ++ +  T+  TG  AEG     + ++ I  AV++ +I  G+VM  AGG   E P L++ +  ++G+V+S+ G+P++L   L+++
Sbjct:   13 TLKIILGSSSKFRQRVFAKITPTFESLSPDIDEKTIRDEDPKTLTRMIAHAKADALLPKIHEPAVLVTADQIVVVN-GH-----VREKPRDEEECRAFLHSYNDQPVEVVNGIVATHTQTGMRAEGNDVVRIQFKHIPEAVIEQLILEGDVMHCAGGLRAEHPALQNSIASMDGTVESLRGVPLELTKRLIKQ 199
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: A0A1G2R322_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_47_12 TaxID=1802451 RepID=A0A1G2R322_9BACT)

HSP 1 Score: 144 bits (363), Expect = 2.460e-37
Identity = 75/190 (39.47%), Postives = 121/190 (63.68%), Query Frame = 3 
Query:  336 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 905
            I+LGS+S  R+R+++  G+ F   + D+DEKAIRD DP+K+   +ARAKA AL  ++ +P +LITADQV L++       ++ EKPES E+A+ FL+ Y+    + ++A+ VTN  TG       E+TV + +    V++ +I  GN+   AG F+LE+P +   ++ IEG++DS+ GLP +L   L++ 
Sbjct:    3 IILGSASKQRKRVLERWGYSFEVMTADIDEKAIRDDDPKKLTMALARAKAEALRPKIKEPVLLITADQVVLWNG------QILEKPESPEQARRFLKGYAQYPAQPVNAVVVTNTQTGVQLGENDENTVYFHKFPDDVIEQLILEGNIFSQAGAFSLEDPLITPYIEHIEGTLDSIEGLPKELTERLMKE 186
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: A0A1G2R879_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_48_16 TaxID=1802453 RepID=A0A1G2R879_9BACT)

HSP 1 Score: 143 bits (361), Expect = 5.090e-37
Identity = 74/191 (38.74%), Postives = 122/191 (63.87%), Query Frame = 3 
Query:  336 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVERA 908
            I+LGS+S  R+ +++ +G+ F   +  +DEKAIR+ DP+K+   +A+AKA AL  R+ +PA+LITADQV + +       ++ EKPE++E+A++FLR Y+    K  +++ VTN +TG    G  E+T+  R +   V++ +I  GN+   AG +AL +P +   +D++EGS+DS  GLP +L   L+  A
Sbjct:    3 IILGSASKQRKGVLEKMGYVFEVMTAGIDEKAIREVDPKKLTMALAKAKAEALRSRIKEPALLITADQVVVCNG------QILEKPENLEQARSFLRGYADYPAKPTNSILVTNTETGVQVGGSDENTIYLRPLPEDVIEQLIKEGNIFSWAGAYALIDPLIVPYIDRVEGSIDSAEGLPRELTERLLREA 187
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: A0A554MGT6_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Parcubacteria group bacterium Greene0714_21 TaxID=2017158 RepID=A0A554MGT6_9BACT)

HSP 1 Score: 139 bits (351), Expect = 1.400e-35
Identity = 73/190 (38.42%), Postives = 120/190 (63.16%), Query Frame = 3 
Query:  336 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 905
            I+LGS+S  R+R+++  G+ F   + D+DEKAIR  DP+++   +A+AKA  L  ++ +PA+LITADQV +++       ++ EKPE+ EEA+ FLR Y+    + ++A  VTN +TG+       +TV ++     V++ +I  GN+   AG F+LE+P +   VD IEG++DS+ GLP +L   L++ 
Sbjct:    3 IILGSASKQRKRVLERAGYRFEVMAADIDEKAIRLDDPKELTMALAKAKAEVLLPQIKEPALLITADQVVVWNG------QILEKPENAEEARQFLRGYAQYPAQPVNATVVTNTETGKQIGENDINTVYFKPFPDEVIEQLIHEGNIFSQAGAFSLEDPLVAPYVDHIEGTLDSIEGLPFELTQRLLKE 186
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: A0A1F6X051_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_36_16 TaxID=1801767 RepID=A0A1F6X051_9BACT)

HSP 1 Score: 140 bits (352), Expect = 1.410e-35
Identity = 79/192 (41.15%), Postives = 125/192 (65.10%), Query Frame = 3 
Query:  336 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSR-SVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVERA 908
            ++LGSSS YR+ +M+  G+ F    P++DEK I + DP K    +ARAKA  L  ++++PA+LIT+D V + +   G+   +REKPES EEA+ FLR YS+  + + ++A+ + N  TG   EGV ++ V W   S +V+++ I  G+ +G AGGF ++ P LR  V KIEG+ +S++G+P+ LL  L+ +A
Sbjct:   13 LILGSSSKYRKDLMEKAGYVFEVLIPELDEKEIIENDPYKRPLLLARAKANVLISKINEPALLITSDAVAVCN---GK---LREKPESEEEARKFLREYSAGVAPEGVTAIVIFNTATGVYYEGVAKAQVFWNPFSESVIENFIKIGDPLGRAGGFGVQHPILRPYVKKIEGNEESIVGMPIHLLKELLTKA 198
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BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Match: A0A1G2C222_9BACT (Nucleoside triphosphate pyrophosphatase n=1 Tax=Candidatus Komeilibacteria bacterium RIFOXYC1_FULL_37_11 TaxID=1798555 RepID=A0A1G2C222_9BACT)

HSP 1 Score: 137 bits (344), Expect = 1.610e-34
Identity = 66/190 (34.74%), Postives = 125/190 (65.79%), Query Frame = 3 
Query:  336 IVLGSSSGYRRRIMDSLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLITADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNLDTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSLVDKIEGSVDSVLGLPVDLLCTLVER 905
            I+LGS+S  R+++++ LG++F     D+DE+AIRD +P+K+ +++A AKA  L E++  PA+L+TADQV  ++        +REKP+S +EA+ FL SY     +T++ + VT+ +TGR  E    + + +++I   +++ +I++G++   AGGF++ +P ++  +  IEG  +S++GLP  +   L+++
Sbjct:    8 IILGSASLGRKKVLEDLGYKFDVLISDIDERAIRDSNPKKLTSKLANAKALVLLEKIKFPALLVTADQVVYWNGI------IREKPQSPQEARDFLNSYEKFPAETVNTVVVTDTETGRKVEASDSAKIYFKKIPNQIIEKLISKGDIFQQAGGFSIWDPLVKPYIKNIEGEEESIIGLPTKITKKLLDQ 191
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig134.2044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLL5_ECTSI3.900e-14896.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XZD4_9STRA2.400e-5146.83Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G1WSY9_9BACT2.360e-3843.52Nucleoside triphosphate pyrophosphatase n=1 Tax=Pa... [more]
A0A1G2MS12_9BACT6.260e-3840.007-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Ta... [more]
A0A2M7XEA1_9BACT9.420e-3839.907-methyl-GTP pyrophosphatase n=1 Tax=Candidatus Uh... [more]
A0A1G2R322_9BACT2.460e-3739.47Nucleoside triphosphate pyrophosphatase n=1 Tax=Ca... [more]
A0A1G2R879_9BACT5.090e-3738.74Nucleoside triphosphate pyrophosphatase n=1 Tax=Ca... [more]
A0A554MGT6_9BACT1.400e-3538.42Nucleoside triphosphate pyrophosphatase n=1 Tax=Pa... [more]
A0A1F6X051_9BACT1.410e-3541.15Nucleoside triphosphate pyrophosphatase n=1 Tax=Ca... [more]
A0A1G2C222_9BACT1.610e-3434.74Nucleoside triphosphate pyrophosphatase n=1 Tax=Ca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig134contigE-siliculosus-1a_F_contig134:8261..13094 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size687
Model size1355
Exons7
Ec32 orthologEc-04_005320.1
Ec32 ortholog descriptionMaf-like protein
Hectar predicted targeting categoryother localisation
BRITEko00000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.D
EggNOG OGsCOG0424@1,KOG1509@2759
EggNOG free text desc.nucleoside-triphosphate diphosphatase activity
KEGG koko:K06287
Seed eggNOG ortholog2880.D8LLL5
Seed ortholog evalue9e-119
Seed ortholog score433.0
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927857.7765453-UTR-E-siliculosus-1a_F_contig134:8260..85271622927857.7765453-UTR-E-siliculosus-1a_F_contig134:8260..8527Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig134 8261..8527 -
1696318711.0689757-UTR-E-siliculosus-1a_F_contig134:8260..85271696318711.0689757-UTR-E-siliculosus-1a_F_contig134:8260..8527Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig134 8261..8527 -
1622927857.7872775-UTR-E-siliculosus-1a_F_contig134:8545..87161622927857.7872775-UTR-E-siliculosus-1a_F_contig134:8545..8716Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig134 8546..8716 -
1696318711.0805132-UTR-E-siliculosus-1a_F_contig134:8545..87161696318711.0805132-UTR-E-siliculosus-1a_F_contig134:8545..8716Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig134 8546..8716 -
1622927857.8731143-UTR-E-siliculosus-1a_F_contig134:12864..130941622927857.8731143-UTR-E-siliculosus-1a_F_contig134:12864..13094Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig134 12865..13094 -
1696318711.1720238-UTR-E-siliculosus-1a_F_contig134:12864..130941696318711.1720238-UTR-E-siliculosus-1a_F_contig134:12864..13094Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig134 12865..13094 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927857.801161-CDS-E-siliculosus-1a_F_contig134:8716..88451622927857.801161-CDS-E-siliculosus-1a_F_contig134:8716..8845Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 8717..8845 -
1696318711.0990498-CDS-E-siliculosus-1a_F_contig134:8716..88451696318711.0990498-CDS-E-siliculosus-1a_F_contig134:8716..8845Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 8717..8845 -
1622927857.8101044-CDS-E-siliculosus-1a_F_contig134:9407..95871622927857.8101044-CDS-E-siliculosus-1a_F_contig134:9407..9587Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 9408..9587 -
1696318711.1156714-CDS-E-siliculosus-1a_F_contig134:9407..95871696318711.1156714-CDS-E-siliculosus-1a_F_contig134:9407..9587Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 9408..9587 -
1622927857.8199425-CDS-E-siliculosus-1a_F_contig134:10021..100901622927857.8199425-CDS-E-siliculosus-1a_F_contig134:10021..10090Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 10022..10090 -
1696318711.1331239-CDS-E-siliculosus-1a_F_contig134:10021..100901696318711.1331239-CDS-E-siliculosus-1a_F_contig134:10021..10090Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 10022..10090 -
1622927857.8365684-CDS-E-siliculosus-1a_F_contig134:10549..106931622927857.8365684-CDS-E-siliculosus-1a_F_contig134:10549..10693Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 10550..10693 -
1696318711.1452606-CDS-E-siliculosus-1a_F_contig134:10549..106931696318711.1452606-CDS-E-siliculosus-1a_F_contig134:10549..10693Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 10550..10693 -
1622927857.8486211-CDS-E-siliculosus-1a_F_contig134:11298..114331622927857.8486211-CDS-E-siliculosus-1a_F_contig134:11298..11433Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 11299..11433 -
1696318711.1543682-CDS-E-siliculosus-1a_F_contig134:11298..114331696318711.1543682-CDS-E-siliculosus-1a_F_contig134:11298..11433Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 11299..11433 -
1622927857.862862-CDS-E-siliculosus-1a_F_contig134:12834..128641622927857.862862-CDS-E-siliculosus-1a_F_contig134:12834..12864Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 12835..12864 -
1696318711.1630945-CDS-E-siliculosus-1a_F_contig134:12834..128641696318711.1630945-CDS-E-siliculosus-1a_F_contig134:12834..12864Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig134 12835..12864 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig134.2044.1prot_E-siliculosus-1a_F_contig134.2044.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig134 8717..12864 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig134.2044.1

>prot_E-siliculosus-1a_F_contig134.2044.1 ID=prot_E-siliculosus-1a_F_contig134.2044.1|Name=mRNA_E-siliculosus-1a_F_contig134.2044.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=229bp
MDETPKTDPLGGGSLSSQPDVELRVQPRPQPCSLPIVLGSSSGYRRRIMD
SLGWEFSTASPDVDEKAIRDPDPRKMCAEIARAKARALAERLDKPAVLIT
ADQVCLFDEGHGRGEEVREKPESVEEAKAFLRSYSSRSVKTLSALCVTNL
DTGRAAEGVHESTVSWREISPAVVDDVIARGNVMGSAGGFALEEPGLRSL
VDKIEGSVDSVLGLPVDLLCTLVERATA*
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mRNA from alignment at E-siliculosus-1a_F_contig134:8261..13094-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig134.2044.1 ID=mRNA_E-siliculosus-1a_F_contig134.2044.1|Name=mRNA_E-siliculosus-1a_F_contig134.2044.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4834bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig134:8261..13094- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGGCCTGCCTATGCATACTTTCTTGGTTATTGGCTGCAGCAACACCGAGG
GTCAGTGAGGAGAGTATCCGGATTGAGAATTTGTTCCCGTTTCTCGAGTC
CGTGCACCAAAAAAAGAAGAGAACACCACAGGCAACATCACATCAGCAGC
AGCACAGCGGGGGGGACAGCATTATCTTCTACCCCTGACGCCTGCCTGTG
CCCGTTGTTGTTGTTGCGCAGGAGCCGGTCATGGACGAGACCCCCAAGAC
AGACCCTCTGGTGAGTACGTACTTCACTCGCCGGGCGTATCTATCCTAAT
GCCCACGTCTCCGCGCCATTGGGTCGACTCGCGTGCATATGTTTCTGCTG
TGCACCAGTCCGCATGGAGGATGGTTCAAGTTGCCTGCCAGGTGTTACAG
ACGCCCAGCGAGTCGTAAGATAGTGCCGCGTCCGATCCAGCATAGTACCG
TAAACTACACAAGATAACACACCCCGTGTTAGGTTTTTTGCATTCCGTAT
TGCTCCACAACCAGGAGGGTGCGAACACCAAACAGCCCGTCATACGAAAG
CTCTCGACGAGATCTTTCCAAAACCACCCTTTTCGGCAGTGGCACCCTCC
TGGTTGTGGAGCTATACGGAATGCAAAAAGCTTAGCACGGGGTGTGTTAT
CTTGTGTAGTTTACGGTAGTGTAGTGCGTCCTGATTCCCGGTTTGTTTGC
GTCTTTATCGTTCTATCGGTCTGCAGCAAAGCTCTACGGCGGAGATATGG
CGTTCAGGTGTACATGTAGTCTACGTTAGACCGAGTACACTCTACACTCT
ACACTGCTTTCAGCCTTGTTCAACCCCGTCCGTTTCAAATGGTTGTACAT
ACACGGGATCGTCGGTTCCAACCCAAAGGAAGTGAAGGTCCCGAAGCCAA
ATCATGCGTATTTCGGAAAGATTATTTGACAAGATGCCCTTAGCAGCGCC
ATCAACAAAACCTTCCAGATTACGAGAAAATCGGCGTCATGCCCGTCCCT
CCGAGGAGGGGGGGGTGGTATACAACGTCAAATACAAACAGCCTGCCTGC
CACCCGATTTCTTACATAATTTACATGTGTTTTAGCCATGCCCGTACGCA
TTGCACGCTTCCAAGTGCATCATCTTCCAGCCGAAAACCTCGGGAGATCC
CTTCAAATATGTACCGCGGTATGTGTGGCGGTTTCGTCGGGCCTCCCTGT
GCCGGAGGTACTCTTTTCAATACTGCCGTACTGTACATACACGAATGCAC
CCCGCCCGGTGGAAGGGAACCTGCAGGAAGGTAGGAATCTATTGTCTCGA
AAGGTATTGAAAAACTTCCAGCACATATTTAATGTGAAGCCAACAACAAC
AACAACAATTAGTTGTTGCTGCGAAAAAGGTAGGGCCGTAGCCGGTACAT
GTACTCACGTGTTCGCGATGGATTTTCGCCAAGAAAGGCCTCGCACTACG
CCATCTATCAGCGCATGAAACTCGACTTGTGGGCTAACTCGCGCCTGTGT
CATCGCTGACACCAAGCCACTTTCGAAACCTCACACTCCGTGCCACGGCT
ACTTCGTTGACCATTTCGCCATATTTGTTCCACGCCGTTCCTCACCCACC
ACCACCACCGACGGCGACGACGACGACGATGACAACACCGACGATCGTGC
ACGGCGAGCAGGGGGGGGGTAGCCTCTCGAGCCAGCCGGACGTGGAGCTA
CGAGTGCAACCTCGGCCACAGCCGTGCTCGTTGCCCATCGTGCTGGGTTC
GTCGTCAGGGTACCGCCGGAGAATAATGGATTCCCTGGGCTGGGAGGTAG
GCGCGGTGAAAAAAGCGTGCGAGTCTGTCCGCCTACTACAATACATACCC
GCGGGGGCGGCGAAGGGGGGCCGGCACTCAGTGCTCGCCGTAGTGACACG
CGTTGCCGCGTATGGACCCACTGGCTCTTCCGTTCCTGCAACGCCGGGAC
GGGGCACGTTAGTCTTTCGCATAGTAGGCGTTTCTGCGTCACGCCGAGGA
AGAGCGGGGAAGGAGAGCTATATCGCCTAGGGTGGGTCGTAGTCTCGCCC
GGCAATTGAGTATGATCAGCGCGGAGGGAGAGTGAGTGTGCTCATAACCC
TTTCTTTGCTTCGCACTCTTGGCGAATGCTTTCGTGGCAAGCGTGTCTTC
TTTTTCTGCTGGAAAGCCTGCCTGTTTGCTTCGCATGGCGAAGGTGCCTC
GTGAGGTCGACTTTACGTTTGTGTCCCTGGTCGCCTGATCTCATCATATT
GTAGCGCCACGGCTGCAGGGCTCTTGACATACTCCCTCACCACATTGCAC
CCTGATTTCCCGCATCCTCACGACAACAGAAGCCAATTATTGGGTAACCC
CCCCCCCCCCCCCCCCCCGTCCCCGTCCCATCCACGAAACCCCGCCAACA
GTTTTCCACGGCCTCTCCCGACGTCGACGAGAAGGCCATCCGCGATCCTG
ACCCGAGAAAGATGTGTGCCGAGATCGCGCGGGCCAAGGCGAGAGCGCTG
GCGGAGCGCCTGGACAAGCCCGCAGTCCTCATCACGGCAGACCAGGTTGA
TGGCCGTTGTTGTGGTTCTTGTTCTGTGATTCTCGTGAGTGTGTGCGAGA
TTTTTTTGCAGGCGGGACTTTCCGTCGGGCATGTCCTCCTCGGGCGAAGG
ACGGAGGGGTGCCGGCCTGAGCGGGACAAGCACGACGAGCGCGCGGTGTA
ACGTTGTAACATTTTTGTGTACTGTTGTTGTTCATTTTAAGTCGGTATCG
ATCTCGCCGATGTGACAGATAGCCGAGGAGGAAGAGTCACCTCGGCAAAT
CACAAGCGAGAAAACTTTACCTTTTGGCTTCGTAGGTTCGTAAAGCACGA
TTGTTGGTGCCCGTTACCCGACCTGCTGCGCTTTATTCGTGTGTACTATA
CGCACCCGAATATTTATGACACAACCATTCGTCCAAAGGTATCTATGCAT
ATCAAAATGATGTGTTCTTGCTTCGTTTCTTGTACCGCCGTTGGGGTCGA
ACAGGTGTGCCTTTTCGACGAAGGTCACGGCCGCGGGGAAGAGGTTAGGG
AGAAGCCCGAAAGCGTCGAAGAGGTGCGTCATGTTTTTCATTTCGTCTCC
GAGAAGTTCTTATTCTAGAACAACCAAACGCTTGCGGGACTGAATGTTTC
GTGTCGGGGTTTCTACAAGCACTCGCAACCGTGCCACCACGTACCACGTG
AGAACCTGGGGGTTGAGGACTTGAGGCTAAAACAAAGGGTACAAACTAAA
GTGTAAGAACTCGGTAATAAAACAATCAGGAGTGGGTAGTCTTTCGTGTA
CTTTCCATTACAGGTTCTGTCCCTCCGGGGCAATGGCGAACTTTTCTACC
GTACTGGAAGCGCCAGAGCGAAGCTTCTTGACGTCCAGGATTCCAAAACC
CACCGCTCATCCGATTACCCTCTTCGTTTTCTCAGGATCCTTCTGTATTT
CAATGAACCACTATTGAAGAGCTGGCGCTGCTGTGCACCCGTGCCCGCCA
CGCACAGGCGAAGGCGTTCCTCCGGAGCTACTCCTCCCGGTCGGTGAAGA
CCCTGAGCGCCCTCTGCGTGACTAACCTCGACACCGGGCGGGCGGCGGAG
GGCGTGCACGAGTCCACCGTGTCCTGGCGGGAGATTTCGCCGGCCGTGGT
CGACGACGTCATCGCCAGGGGGAACGTTATGGGGTCGGTGAGGAGCGAGA
AAAACGGAAATGGAAAACCGTGCGGGTGTATTGTAGTAGTAGTGTGGGAG
TGGGTGTCTTCCACGGGATAGCCGTCATTATCGCCGTCCCGCATATAGGT
ACTAACCGCACACCGCCGTTAGCAACGAGTGCCTTGGTGCTGAGGTCGCC
GTTCGTTGTTGTTGTGGTCTTCACACTAAAGGAGCCGTTCCGATCTCGCC
AACGACCGTTGGCATCCGCACATTCCATTTTCCAACTGACGCGAGAAGGA
CTAAGGTTTGTCGGGTGCTTTTCGATCGACCGACTTGCAGCACCGACTGG
TCGCAGCCGTTTTTGTTCCCGCCCGCGAACCACGCCGGTGGCTTCGCCGT
CGCAGTCCCAGGTCCCGCACTGTCCGTGGAGGGCAGGGTCATGGGACCGT
TCGATAGCACCCACCGTCAATGAACAAGAAAACTACTCTAGCACGGAGAG
CTTTTCGATGTTTGCTTAGCCTACCTATGTTCCCGCACTTGATTTTGAGT
GTTGCTTGTGCATTTTTGCTACTGTCGACGCAACTTTTCGAACCGTCAGG
CGGGCGGCTTTGCGCTGGAAGAGCCAGGCTTGAGGTCGCTGGTGGACAAG
ATCGAGGGCTCGGTCGATAGTGTCCTGGGCTTGCCCGTTGACCTCCTGTG
CACCCTCGTCGAGCGCGCCACGGCGTGACCTGGAGAAGGAGGCGGCCGAT
AGTGGTAGCTGGGGTGGCCGCACGTGCGGGATTGAGAAACAACACCACAA
GACCGTCCAGATGTGTCTCTTAAGAGAGAGAGAGAGAGAGAGAGAGAGAC
ACACACACACACACACAGACAGACAGACAGACAGACAGACAGACAGAGAG
TGGAGTGACAGAGGGAGGCCTGGACTAAGAGACTTCAGTTTTTCGCTTTT
AGGTGTGTCGGTTGGGGAGGTGTACTGGCACGCTTCACACACAAGACAGG
TATGCAGTTGCATGTCTTTGTCCTAGATGGCGTTGGCAGCAACGCATAGC
ATGGCTCCAGCACAGGTGTTCCTCGCTTCGGTTGTTCGCGAAGAGAAGTG
AATGTTTGCGTCGATAATGACAGATTCGCCAATGGCAGTCTCACTATTTT
GTGGACAGAGGTGGGGGTAAAAAAATATTCGGAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig134:8261..13094-

>mRNA_E-siliculosus-1a_F_contig134.2044.1 ID=mRNA_E-siliculosus-1a_F_contig134.2044.1|Name=mRNA_E-siliculosus-1a_F_contig134.2044.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1374bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig134:8261..13094- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGAGACCCCCAAGACAGACCCTCTGATGGACGAGACCCCCAAGAC
AGACCCTCTGGGGGGGGGTAGCCTCTCGAGCCAGCCGGACGTGGAGCTAC
GAGTGCAACCTCGGCCACAGCCGTGCTCGTTGCCCATCGTGCTGGGTTCG
TCGTCAGGGTACCGCCGGAGAATAATGGATTCCCTGGGCTGGGAGGGGGG
GGGTAGCCTCTCGAGCCAGCCGGACGTGGAGCTACGAGTGCAACCTCGGC
CACAGCCGTGCTCGTTGCCCATCGTGCTGGGTTCGTCGTCAGGGTACCGC
CGGAGAATAATGGATTCCCTGGGCTGGGAGTTTTCCACGGCCTCTCCCGA
CGTCGACGAGAAGGCCATCCGCGATCCTGACCCGAGAAAGATGTGTGCCG
AGATCGCGCGGGCCAAGGCGAGAGCGCTGGCGGAGCGCCTGGACAAGCCC
GCAGTCCTCATCACGGCAGACCAGTTTTCCACGGCCTCTCCCGACGTCGA
CGAGAAGGCCATCCGCGATCCTGACCCGAGAAAGATGTGTGCCGAGATCG
CGCGGGCCAAGGCGAGAGCGCTGGCGGAGCGCCTGGACAAGCCCGCAGTC
CTCATCACGGCAGACCAGGTGTGCCTTTTCGACGAAGGTCACGGCCGCGG
GGAAGAGGTTAGGGAGAAGCCCGAAAGCGTCGAAGAGGTGTGCCTTTTCG
ACGAAGGTCACGGCCGCGGGGAAGAGGTTAGGGAGAAGCCCGAAAGCGTC
GAAGAGGCGAAGGCGTTCCTCCGGAGCTACTCCTCCCGGTCGGTGAAGAC
CCTGAGCGCCCTCTGCGTGACTAACCTCGACACCGGGCGGGCGGCGGAGG
GCGTGCACGAGTCCACCGTGTCCTGGCGGGAGATTTCGCCGGCCGTGGTC
GACGACGTCATCGCCAGGGGGAACGTTATGGGGTCGGCGAAGGCGTTCCT
CCGGAGCTACTCCTCCCGGTCGGTGAAGACCCTGAGCGCCCTCTGCGTGA
CTAACCTCGACACCGGGCGGGCGGCGGAGGGCGTGCACGAGTCCACCGTG
TCCTGGCGGGAGATTTCGCCGGCCGTGGTCGACGACGTCATCGCCAGGGG
GAACGTTATGGGGTCGGCGGGCGGCTTTGCGCTGGAAGAGCCAGGCTTGA
GGTCGCTGGTGGACAAGATCGAGGGCTCGGTCGATAGTGTCCTGGGCTTG
CCCGTTGACCTCCTGTGCACCCTCGTCGAGCGCGCCACGGCGTGAGCGGG
CGGCTTTGCGCTGGAAGAGCCAGGCTTGAGGTCGCTGGTGGACAAGATCG
AGGGCTCGGTCGATAGTGTCCTGGGCTTGCCCGTTGACCTCCTGTGCACC
CTCGTCGAGCGCGCCACGGCGTGA
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