mRNA_E-siliculosus-1a_F_contig1339.2042.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1339.2042.1
Unique NamemRNA_E-siliculosus-1a_F_contig1339.2042.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: A0A6H5K7Z6_9PHAE (DUF4440 domain-containing protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Z6_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 3.100e-141
Identity = 208/217 (95.85%), Postives = 211/217 (97.24%), Query Frame = 1 
Query:    1 MMNFGKMPAGRTASRLARVVGKSESSIQSSVRAAGSMNALLSTRSGLTVTQAATRLAAVKLPVRHMSGQADYAANYTADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQH 651
            MMNFGKMPAGRTASRLARVV KSESSIQSSVRA GSMNALLSTRSGLTVTQAATRL AVKLPVR MSGQADYAANYT+DQKAVDAATRNWRD VT+NTEDAPKKTAAIYADDALFWGTVSE+VRNTP HVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQH
Sbjct:    1 MMNFGKMPAGRTASRLARVVSKSESSIQSSVRAGGSMNALLSTRSGLTVTQAATRLTAVKLPVRQMSGQADYAANYTSDQKAVDAATRNWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEQVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQH 217
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: A0A6H5K6U8_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U8_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 8.050e-102
Identity = 146/152 (96.05%), Postives = 150/152 (98.68%), Query Frame = 1 
Query:  196 MSGQADYAANYTADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQH 651
            MSGQADYAANYTADQKAVDAATR+WRD VT+NTEDAPKKTAAIYADDALFWGTVSEEVRNTP HVYDYFDFFARMPKLSMVAYDPAPPRIHGDFA+HAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVM+EHHSSAMPKAPPGLKPAQH
Sbjct:    1 MSGQADYAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAVHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLKPAQH 152
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.110e-49
Identity = 91/144 (63.19%), Postives = 106/144 (73.61%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK------WVMVEHHSSAMPKAPPGLKP 642
            T DQKAV A T  W+D VT  T+DAPKKTAA+YA DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G+FA+ AG YTFAW G DG   E RARF+F +RR  GK      W +VEHHSS+MP AP  LKP
Sbjct:  291 TPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRR--GKPGSPQPWTIVEHHSSSMPIAPAELKP 432
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 6.610e-49
Identity = 89/144 (61.81%), Postives = 105/144 (72.92%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENG----KWVMVEHHSSAMPKAPPGLKPAQ 648
            T DQKAV A T  W+D VT  T+DAPKKTAA+YA DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G FA+ AG YTFAW G DG   E RARF+F +RR+       W +VEHHSS+MP AP  LKP +
Sbjct:  285 TPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVE 428
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 2.190e-47
Identity = 87/141 (61.70%), Postives = 105/141 (74.47%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK----WVMVEHHSSAMPKAPPGLK 639
            T D KAV   T  W++ VT  TEDAPKKTAA+YA+DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G FA+ AG YTFAW G DG   E RARF+F +RR++ +    W +VEHHSS+MP AP GLK
Sbjct: 1415 TPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLK 1555
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.130e-46
Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK------WVMVEHHSSAMPKAPPGLK 639
            T DQKAV   T  W+D VT  T+DAPKKTAA+YA DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL ++ Y PAP R++G+FA+ AG YTFAW G DG   E RARF+F +RR  GK      W +VEHHSS+MP AP  LK
Sbjct:  320 TPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRR--GKPGSPRPWTIVEHHSSSMPDAPAELK 460
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 3.820e-46
Identity = 83/141 (58.87%), Postives = 102/141 (72.34%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK----WVMVEHHSSAMPKAPPGLK 639
            T + KA    T  W+D VT  TEDAPKKT+A+Y +DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G FA+ AG YTFAW G D    E RARF+F +RR++ +    W +VEHHSS+MP AP GLK
Sbjct:  290 TPEMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLK 430
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BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 2.900e-45
Identity = 82/142 (57.75%), Postives = 100/142 (70.42%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK---WVMVEHHSSAMPKAPPGLKPA 645
            T DQKAV A    W+D VT  T+D P+KTA +YA DA  WGTVSEEVR+TP  +Y YFD+FAR+P L +V Y P   R++GDFA+ AG YTF+W   DG   E RARF+F +RR+  K   W +VEHHSS+MP AP GLKPA
Sbjct:  184 TPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRDPSKPQQWAIVEHHSSSMPTAPAGLKPA 325
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 4.890e-44
Identity = 82/142 (57.75%), Postives = 100/142 (70.42%), Query Frame = 1 
Query:  229 TADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK---WVMVEHHSSAMPKAPPGLKPA 645
            T DQKAV A    W+D VT  T+D P+KTA +YA DA  WGTVSEEVR+TP  +Y YFD+FAR+P L +V Y P   R++GDFA+ AG YTF+W   DG   E RARF+F +RR+  K   W +VEHHSS+MP AP GLKPA
Sbjct:  329 TPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRDPNKPQQWAIVEHHSSSMPTAPAGLKPA 470
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 7.500e-42
Identity = 80/165 (48.48%), Postives = 104/165 (63.03%), Query Frame = 1 
Query:  154 AATRLAAVKLPVRHMSGQADYAANYTADQKAVDAATRNWRDNVTANTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGK---WVMVEHHSSAMPKAPPGLK 639
            AAT +    +PV   +G    AA    D+K V+  T  W++ VT  T DAP+KTA +YA D + WGTVSEEVR+TP  +YDYFD+FAR+P L +  + P   R++GDFA  AG YTF W G DG   E RARF+F +R +      W +VEHHSS+MP +P  LK
Sbjct:   80 AATAMGLTAVPVTRSAG----AAVTEGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLK 240
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1339.2042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7Z6_9PHAE3.100e-14195.85DUF4440 domain-containing protein n=7 Tax=Ectocarp... [more]
A0A6H5K6U8_9PHAE8.050e-10296.05DUF4440 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JT29_9PHAE1.110e-4963.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF8_ECTSI6.610e-4961.81Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5LB09_9PHAE2.190e-4761.70Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0Z5_9PHAE1.130e-4661.54PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FN21_ECTSI3.820e-4658.87Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JX02_9PHAE2.900e-4557.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF9_ECTSI4.890e-4457.75Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JSB2_9PHAE7.500e-4248.48DUF4440 domain-containing protein n=2 Tax=Ectocarp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1339contigE-siliculosus-1a_F_contig1339:10167..14467 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size654
Model size1476
Exons6
Hectar predicted targeting categorymitochondrion
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2S0Y2@2759,COG4875@1
EggNOG free text desc.SnoaL-like domain
Seed eggNOG ortholog2880.D8LFN9
Seed ortholog evalue2.8e-117
Seed ortholog score427.9
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927857.3927975-CDS-E-siliculosus-1a_F_contig1339:10166..103731622927857.3927975-CDS-E-siliculosus-1a_F_contig1339:10166..10373Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 10167..10373 +
1696318710.8687687-CDS-E-siliculosus-1a_F_contig1339:10166..103731696318710.8687687-CDS-E-siliculosus-1a_F_contig1339:10166..10373Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 10167..10373 +
1622927857.4087238-CDS-E-siliculosus-1a_F_contig1339:11227..112551622927857.4087238-CDS-E-siliculosus-1a_F_contig1339:11227..11255Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 11228..11255 +
1696318710.8811617-CDS-E-siliculosus-1a_F_contig1339:11227..112551696318710.8811617-CDS-E-siliculosus-1a_F_contig1339:11227..11255Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 11228..11255 +
1622927857.4238825-CDS-E-siliculosus-1a_F_contig1339:11895..120621622927857.4238825-CDS-E-siliculosus-1a_F_contig1339:11895..12062Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 11896..12062 +
1696318710.890768-CDS-E-siliculosus-1a_F_contig1339:11895..120621696318710.890768-CDS-E-siliculosus-1a_F_contig1339:11895..12062Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 11896..12062 +
1622927857.4360194-CDS-E-siliculosus-1a_F_contig1339:12346..125861622927857.4360194-CDS-E-siliculosus-1a_F_contig1339:12346..12586Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 12347..12586 +
1696318710.9002728-CDS-E-siliculosus-1a_F_contig1339:12346..125861696318710.9002728-CDS-E-siliculosus-1a_F_contig1339:12346..12586Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 12347..12586 +
1622927857.4493947-CDS-E-siliculosus-1a_F_contig1339:13140..131521622927857.4493947-CDS-E-siliculosus-1a_F_contig1339:13140..13152Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 13141..13152 +
1696318710.911716-CDS-E-siliculosus-1a_F_contig1339:13140..131521696318710.911716-CDS-E-siliculosus-1a_F_contig1339:13140..13152Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1339 13141..13152 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927857.4633553-UTR-E-siliculosus-1a_F_contig1339:13152..131841622927857.4633553-UTR-E-siliculosus-1a_F_contig1339:13152..13184Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1339 13153..13184 +
1696318710.9291298-UTR-E-siliculosus-1a_F_contig1339:13152..131841696318710.9291298-UTR-E-siliculosus-1a_F_contig1339:13152..13184Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1339 13153..13184 +
1622927857.477471-UTR-E-siliculosus-1a_F_contig1339:13677..144671622927857.477471-UTR-E-siliculosus-1a_F_contig1339:13677..14467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1339 13678..14467 +
1696318710.9472103-UTR-E-siliculosus-1a_F_contig1339:13677..144671696318710.9472103-UTR-E-siliculosus-1a_F_contig1339:13677..14467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1339 13678..14467 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1339.2042.1prot_E-siliculosus-1a_F_contig1339.2042.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1339 10167..13152 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1339.2042.1

>prot_E-siliculosus-1a_F_contig1339.2042.1 ID=prot_E-siliculosus-1a_F_contig1339.2042.1|Name=mRNA_E-siliculosus-1a_F_contig1339.2042.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=218bp
MMNFGKMPAGRTASRLARVVGKSESSIQSSVRAAGSMNALLSTRSGLTVT
QAATRLAAVKLPVRHMSGQADYAANYTADQKAVDAATRNWRDNVTANTED
APKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDP
APPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEH
HSSAMPKAPPGLKPAQH*
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mRNA from alignment at E-siliculosus-1a_F_contig1339:10167..14467+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1339.2042.1 ID=mRNA_E-siliculosus-1a_F_contig1339.2042.1|Name=mRNA_E-siliculosus-1a_F_contig1339.2042.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4301bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1339:10167..14467+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGAACTTTGGAAAGATGCCCGCGGGAAGGACTGCGTCCAGGCTGGC
AAGGGTCGTCGGCAAGAGCGAGTCCAGCATCCAGAGCAGCGTCCGGGCCG
CCGGCTCGATGAACGCTCTGCTGTCGACGAGGTCTGGCCTCACCGTCACC
CAGGCGGCGACCAGGCTTGCCGCCGTGAAGCTCCCGGTTAGGCACATGTC
TGGACAGGTGAGGTGATGTGTACCAACTCTGGAGGCGTGTCTGAAGGCGC
TGGTCTCTCTTCTGTGTGTGTGATTGTTCTGGCTTGTGAGCATGTAGCAT
GCACCACCATGCGGCATATTTTTGACGCATGCACCACCATGCGGGATATT
TTTGAAAGGACCCGTGTCTCGTCGGCTACATTTGATGGATCACGTTGAGG
CGCACACGCGCTTCCTTGAACGCCACGAAAAGACAAGCACACATCCAAGT
GCCTTGCAATGTTTTCCAACACCCCCCGCGCCACCCCGCAGTCTGTTAGG
ATCGTTTTCACTGAGAAGCTGTAACTGCGCCTCTCGATTTGCCACACAAA
CATCCAGCACATACAACACATGAACATGTGCGAGGCTGTCTCTCGGGCCT
CTTCGCGCCGTCACAGTCTTTTTTTTGTTCGGGTCGTGTCGTGTTCCATC
ATGGTGTGCGCGCTCCCAAACGGCAGTACCTTGCACTTTTCTCAATACTG
CTGTACCCCCTGTCACACGCGGGCGCAGGTAGGCGCTGTGCCGCTTTGTC
GCACGCGTACGGCTGCAGTTTGGTGCAAGGCACCCACCCATGAATCTGTA
CACTTGGATCATAGAATTGTCTTCTCGTTTCCGCCTCCCGTCCTCATCGT
TCCCCACCTCAAAACTCCTGTTGTGTCACTGAAATGAAATGGGGAATTAA
GCGCGCTCCTTAGCAGTGCGGTCTAGCCGCGTGAGTGCGGCAAACCGTTA
AATTAACCTCTCCCCCCCTCGCTCTTCCCGCTCGCTCTGTTTCCCTGAAC
GTGGCGAAACGTTGTGCCCGACGCGCTCGCAATTATCGGACTTCGCGCGG
ACCTGGGTTAGGCCGACTACGCGGCCAACTACACCGCCGGTGAGTCAACC
GGTAGCGTTCGTTGTTTTTGTCTCGCTTGCTGTCGCATGTTGCCGTATGG
GTGCTGTAGACATGGCGTGTTCTCGCCGCAGGCGTCGTTTGCCGCTTAGT
GTGTAGTAGCTGGCTCGTGTGTTTCTGGTGTTTTTTTGCTTTCGTCTTGT
TCGCTTCCTTGTCCGTCATTAATGCATTAATGTGTTCCATTCGGCAACTC
CCTATTTACCGAAGAGAGTCGTTTCGACCGTTTCAACTACTTTGCGGTCA
TCTTTTGTTTTCTTCCCGCATAGATACGCGTAGCACGCTACCTTGTTTAT
CCCCCCATTCTTCCGTGTCGGGTGATCCGATATGAACGTTCGTATCAATG
GGCTCTTATCTCTCCCGCCGTACTATAATATTTTTTCGTTAACCAGGTGA
TGTGAGGTGAACGTTCATCTCACATATTGTATGCCTGTACCTCTACATTT
TGTTGTTGTTGTCCGTGTCGGGTGATCCGATATGAACGTTCGTATCAATG
GGCTCTTGTCTCTCCCGCTGTACTACAATGTTTTGTCTTGTCTCGGGTGA
TGTGAGGCGAACGTTCATCTCACATATATGTGCCTGTGCCTCTAAATTTG
TTGTTGCCGGTGTCGTGTCTGGTGGACAGACCAGAAGGCCGTCGACGCCG
CGACTAGGAACTGGAGGGACAACGTGACCGCCAACACAGAGGACGCACCC
AAGAAGACCGCCGCCATCTACGCTGACGACGCGCTCTTCTGGGGAACGGT
CTCGGAGGAGGTCCGCAACACGCCCGCGCACGTCTACGACTACTTTGTAA
GTGGGAGTTTTGAAGGCTATGTTGTTCAGCAGCAGCAGTAGGAATAGCCA
TCGCGTGAGTTGGTGTGTGCGTGTTGCGTTGTCTGTATTGTAGTTGTGCT
CAATACATGTAGCGTCGTGGCGCCGATTGTTTTCTTTGACCCTGTGATGT
TTCTTTCAACTGTTGTTTGGCGACCACCTCGGACAGGTAGGGAATTTTTG
GTTTTTGCACCACTCGCTGCTGGCACAGCCCAGCAATCTACACATGGACT
ACCTCTGACCCTTGTTTTCCCCCCACACAGGACTTCTTTGCCCGCATGCC
CAAGCTCTCCATGGTCGCGTACGACCCGGCGCCCCCGCGCATCCACGGGG
ACTTCGCCATCCACGCGGGCGCCTACACGTTCGCCTGGGCGGGAGCTGAC
GGGGCCATGACCGAGACGCGGGCTCGCTTCACGTTTGCGTACCGAAGGGA
GAACGGGAAGTGGGTGATGGTCGAGCACCACTCCTCCGCGATGCCCAAGG
CGCCCCCGGGCCTCAAGCCGGTGAGTATTTGCAGGGGCCGTACATAGTAG
AATGAGGATTGAGCTGTCGTACTACTATTTTCCGTTGGTTTTTTCGATGT
GTATTTCGCGGTAGAAATGGGTTTGGGAGAGTGGTCATTTGGTGCTTGCT
TTGTCACGATTATTCAGAAGTGCATCTCTTGCCGACAGATAATCGAGTAT
GGGATAGATTTAGCACAGCGTTTTAATTTCTTGTGATGGCCAACCTGTTG
TCTGCGGTTCCCCGGGTATATATAGCGACTCCCTTTTGTTCCTAGTTTTT
TTCTTGCTAATATTACTTCGAAGTATGACACAACGAATCCATCTCTGTCG
TTATTGTTATATTCTCACTCACCGTCCAAGTATATTGTTCTTTTTTGTTT
GTTGTGTTATTGAGCTCGATCACGCCGATTCACCACTTGAACTAGGCTCT
CGCCGTCCTCTGCAGTGTTTTTTGGCCACGTCGTTTTCGTGAGTCCTCTG
CCTCGCACGCAATTGCACCATCCACCCTTAACCCAACCGCTCCCGACTGT
GATGCCGCGTCCGCTGTCGCGCAGGCCCAGCACTAAGATGCCTCCGGAGA
TGGAAGAAACAGACAGACGTGAGTTTCTTGTGTAGGCGTGGACATATGTC
ACCCTCTTTTGCGTCCATCTCGCGACATGTTTTCCATTCGCGTGCTTTTG
GGTGTACGCAATTGCTTCCGATGCCGGCCGCTGTCGCTGCCTCGGGTGTA
CAGGTAGCACCCGCGCTGAAGAACTTGACACTATTGAAAAATCTTGGATT
ATGTAAAACTTGAAAAATCTTGGAAGATCATTTGAGGAACCACACAGCGG
CCATCTGCAGCACCTTGAGAAAGAGTATCCCCATACAGTCGTTGGCCTAC
AGAAGATACTGTATCCAGGTTTTTCGTGTTATCGCCGCAGGGTGTGCCCT
GCTTGCACAAACCAGACACCGAACGAAGCTTGCTCTCGGATTTTTTCCCT
GGTGACCGACCGCGATGTGATTGGCATTCGACTTTGGACTGAACATGCTC
TCCCCCCGATTTGCCCGTCCGTTTTTCTCTGTTTGTGTGTGTCGCGGTCT
CAACTCAGCAGGCGTTCACGTCCAGCAAGCACCTGTTCGATTATGAATGG
CGAGCGGGCGGGCAGCAGGCACGAGAACTGCCTCGAATCTCGTAGACTTC
TTGATTCGTGTTTGATGATAATGCCGGTTTGGCGATAGCTCGCCTATAGA
TATAGAAGCAGGTCTGGAGCACCTGAACCTTTTTGATGCCGTTTTTTAAA
TGGAGCAGATGAAGCACACAGTGGGCGCGTGCGCTGATGTGTTTTGTGAT
GGAAGGATATTGTTGAGGTTGAACAGGGGGTTAGCTGTTGGTATTTTCCG
AGCTAGCTCTCTCGCGGTTGGTTCCCAAGGTATCACCTATTGGCAACTAC
GGTGAAGTGTTGTTGTTTTTCGTGGCGTGCGATCGCGACAGGAGGACTGG
ACGATGTTGAGGCGGCCTGGCGCGCCATGACCCTCCCCAAGAATGGCAAC
GTGGGCGTTTTTTTTTTCCGGTAATTTATTGCATGGTGTTGTGCAGGTTA
TTGGCCGTGAATCGGACGTTCCTGGTTAATTGTGGCTGATTCGAGATGAT
CATAAATCGTATCAAGTACAAGCTGGTGTGTCTTGAGGTACTTGGGGTAC
ACTTTTAGCCTCGTTGGATTCATGTGCATAGAATGCTGGTGGAGCGTGTT
GAGAAGGTGTGTGATGAGAGGTAGCACCGTGTGAGATCTTCTTGCTTCTT
GCCAATATATATACTTTAGACCATCCATCTCCCTTGCTGGAATAGCATGA
CCTGTTCCTTGTGTGTTGGACATAACTGCAAGCGCAACCCTCCTATGCCC
C
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1339:10167..14467+

>mRNA_E-siliculosus-1a_F_contig1339.2042.1 ID=mRNA_E-siliculosus-1a_F_contig1339.2042.1|Name=mRNA_E-siliculosus-1a_F_contig1339.2042.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1308bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1339:10167..14467+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGAACTTTGGAAAGATGCCCGCGGGAAGGACTGCGTCCAGGCTGGC
AAGGGTCGTCGGCAAGAGCGAGTCCAGCATCCAGAGCAGCGTCCGGGCCG
CCGGCTCGATGAACGCTCTGCTGTCGACGAGGTCTGGCCTCACCGTCACC
CAGGCGGCGACCAGGCTTGCCGCCGTGAAGCTCCCGGTTAGGCACATGTC
TGGACAGATGATGAACTTTGGAAAGATGCCCGCGGGAAGGACTGCGTCCA
GGCTGGCAAGGGTCGTCGGCAAGAGCGAGTCCAGCATCCAGAGCAGCGTC
CGGGCCGCCGGCTCGATGAACGCTCTGCTGTCGACGAGGTCTGGCCTCAC
CGTCACCCAGGCGGCGACCAGGCTTGCCGCCGTGAAGCTCCCGGTTAGGC
ACATGTCTGGACAGGCCGACTACGCGGCCAACTACACCGCCGGCCGACTA
CGCGGCCAACTACACCGCCGACCAGAAGGCCGTCGACGCCGCGACTAGGA
ACTGGAGGGACAACGTGACCGCCAACACAGAGGACGCACCCAAGAAGACC
GCCGCCATCTACGCTGACGACGCGCTCTTCTGGGGAACGGTCTCGGAGGA
GGTCCGCAACACGCCCGCGCACGTCTACGACTACTTTACCAGAAGGCCGT
CGACGCCGCGACTAGGAACTGGAGGGACAACGTGACCGCCAACACAGAGG
ACGCACCCAAGAAGACCGCCGCCATCTACGCTGACGACGCGCTCTTCTGG
GGAACGGTCTCGGAGGAGGTCCGCAACACGCCCGCGCACGTCTACGACTA
CTTTGACTTCTTTGCCCGCATGCCCAAGCTCTCCATGGTCGCGTACGACC
CGGCGCCCCCGCGCATCCACGGGGACTTCGCCATCCACGCGGGCGCCTAC
ACGTTCGCCTGGGCGGGAGCTGACGGGGCCATGACCGAGACGCGGGCTCG
CTTCACGTTTGCGTACCGAAGGGAGAACGGGAAGTGGGTGATGGTCGAGC
ACCACTCCTCCGCGATGCCCAAGGCGCCCCCGGGCCTCAAGCCGGACTTC
TTTGCCCGCATGCCCAAGCTCTCCATGGTCGCGTACGACCCGGCGCCCCC
GCGCATCCACGGGGACTTCGCCATCCACGCGGGCGCCTACACGTTCGCCT
GGGCGGGAGCTGACGGGGCCATGACCGAGACGCGGGCTCGCTTCACGTTT
GCGTACCGAAGGGAGAACGGGAAGTGGGTGATGGTCGAGCACCACTCCTC
CGCGATGCCCAAGGCGCCCCCGGGCCTCAAGCCGGCCCAGCACTAAGCCC
AGCACTAA
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