mRNA_E-siliculosus-1a_F_contig13366.2032.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig13366.2032.1
Unique NamemRNA_E-siliculosus-1a_F_contig13366.2032.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5LN90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN90_9PHAE)

HSP 1 Score: 583 bits (1504), Expect = 2.550e-205
Identity = 301/375 (80.27%), Postives = 305/375 (81.33%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNVPDDKPF-------------------------------------------------------------SKSPVPPNQSKSSMSKFFLHEGLLCRSYIPAHIRRRAQFRDQLVVPSSLRTLVISSCHDLPSSG 942
            AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRR IKDYADVTAPLVELTRKDYVKRASFKKAWG AQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMK+CIAVVWALTHWRPYLW RH TCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDAL RIFSEVNG+ VPSEP LAAICRNVPDDKPF                                                             +KSPVP NQSKSSMSKFFLHEGLLCRSYIPAH+RRRA FRDQLVVPSSLRTLVISSCHDLPSSG
Sbjct:  137 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRAIKDYADVTAPLVELTRKDYVKRASFKKAWGSAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKECIAVVWALTHWRPYLWGRHFTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALSRIFSEVNGDHVPSEPRLAAICRNVPDDKPFCPPVPRDYEVSSYNLDETALVESDRELFSSAVSVFPVVDSVKLLDHQKREFRQYFDYLASPAKSPVPSNQSKSSMSKFFLHEGLLCRSYIPAHLRRRAHFRDQLVVPSSLRTLVISSCHDLPSSG 511          
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5JXY7_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY7_9PHAE)

HSP 1 Score: 563 bits (1450), Expect = 1.470e-194
Identity = 288/375 (76.80%), Postives = 299/375 (79.73%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNVPDDKPF-------------------------------------------------------------SKSPVPPNQSKSSMSKFFLHEGLLCRSYIPAHIRRRAQFRDQLVVPSSLRTLVISSCHDLPSSG 942
            AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTA LVELTRKDYVKRASFKKAWG AQDAAF+NVKRVLSSTPVLHFPDFSREF VHTDASEQGVGAFLAQPS D  DGKEL+IVAFYSKRFSKGQRHYS+TMK+CIAVVWALTHWRPYLW RH +C TDHQALTYLYHMQDTSNMLTRWAIALQ+YDFT+KHVPGKLNVVPDAL RIFS+VNG+ VPSEP  AAICRNVPDDKPF                                                             +KSPVP NQSKSSMSKFFLHEGLLCRSYIPAH+RRRA FRDQLVVPSSLRTLVISSCHDLPSSG
Sbjct:  320 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTASLVELTRKDYVKRASFKKAWGSAQDAAFQNVKRVLSSTPVLHFPDFSREFAVHTDASEQGVGAFLAQPSHDIDDGKELNIVAFYSKRFSKGQRHYSSTMKECIAVVWALTHWRPYLWGRHFSCGTDHQALTYLYHMQDTSNMLTRWAIALQSYDFTIKHVPGKLNVVPDALSRIFSKVNGDHVPSEPRFAAICRNVPDDKPFCPPVPRDYEVSSYNLDETALVESDRELFSSAVSVFPVVDSVKLLDHQKREFRQYFDYLASPAKSPVPSNQSKSSMSKFFLHEGLLCRSYIPAHLRRRAHFRDQLVVPSSLRTLVISSCHDLPSSG 694          
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5J8C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8C1_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 1.280e-186
Identity = 291/432 (67.36%), Postives = 298/432 (68.98%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSST---------------------------------------------------------PVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNVPDDKPF-------------------------------------------------------------SKSPVPPNQSKSSMSKFFLHEGLLCRSYIPAHIRRRAQFRDQLVVPSSLRTLVISSCHDLPSSG 942
            AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRK+ +KRASF+KAWG AQDAAFENVKRVLSS                                                          PVLHFPDFSREFVVHTDASEQGVGAFLAQPSRD  DG ELDIVAFYSKRFSKGQ HYSATMK+ IAVVWALTHWR YLW RH TCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDAL RIFSEVNG+ VPSEP LAAICRNVPDDKPF                                                             +KSPVPPNQSKSSMSKFFLHEGLLCRSYI AH+RRRA FRDQLVVPSSLRTLVISSCHDLPSSG
Sbjct:   53 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKNCIKRASFRKAWGSAQDAAFENVKRVLSSPVLHFPVFSREFVVHTDASEQGVGAFLAQPSRDIDDGNELDIVAFYSKRFSKGQGHYXPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDIDDGNELDIVAFYSKRFSKGQGHYSATMKEFIAVVWALTHWRLYLWGRHFTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALSRIFSEVNGDHVPSEPRLAAICRNVPDDKPFCPPVPRDYEVSSYNLDETALVESDRELFSSAVSVFPVVDSVKLLDHQKREFRQYFDYLASPAKSPVPPNQSKSSMSKFFLHEGLLCRSYIAAHLRRRAHFRDQLVVPSSLRTLVISSCHDLPSSG 484          
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5JK17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK17_9PHAE)

HSP 1 Score: 433 bits (1113), Expect = 2.340e-146
Identity = 220/263 (83.65%), Postives = 225/263 (85.55%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNVPDDKPFSKSPVPPNQSKSS 789
            AK ISV+TDRIDAIRNLPTPTCIKDLRS              YADVTAPLVELTRKDYVKRAS  + WGPAQDAAFENVKRVLSS PVLH PDFSRE VVHTDASEQGVGAFLAQPSRDSADGKE DIVAFYSKRFSKGQ HYSATMK+CIAVVWALTHWRPYLW RH TCSTDHQALT LYHMQDTSNMLTRWAIALQNYDFTVKHVP KLNVVPDAL R+FSEVNGNPV SEP LAAICRNVPDD PF   PVP +   SS
Sbjct:  230 AKDISVTTDRIDAIRNLPTPTCIKDLRS--------------YADVTAPLVELTRKDYVKRASLIEEWGPAQDAAFENVKRVLSSIPVLHLPDFSRELVVHTDASEQGVGAFLAQPSRDSADGKEFDIVAFYSKRFSKGQHHYSATMKECIAVVWALTHWRPYLWGRHFTCSTDHQALTSLYHMQDTSNMLTRWAIALQNYDFTVKHVPWKLNVVPDALSRVFSEVNGNPVLSEPRLAAICRNVPDDTPFCP-PVPRDYEVSS 477          
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5JGF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF6_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 7.000e-145
Identity = 229/375 (61.07%), Postives = 257/375 (68.53%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNVPDDKPF-------------------------------------------------------------SKSPVPPNQSKSSMSKFFLHEGLLCRSYIPAHIRRRAQFRDQLVVPSSLRTLVISSCHDLPSSG 942
            AKGI VSTDRIDAIR++ TP CIKDLRS+LGM NFVRRF K+YAD+TAPLV+LTRKD+VK   F++AWGP QDAAF+ +K  L S  VLHFPDFSREFVVHTDASE GVGAFLAQPS+DS   K +DIVA+YSKRF  GQRHYS TMK+C AVVWALTHWRPYLW R  TC TDHQALTYLYHMQDTSNMLTRWAI LQN+DFTVKHVPGKLNVVPD L RIFSE++G P+P EP LAAICRNVPDD+PF                                                             +K+ VP +Q KSSMSKFF+HEG               +  DQLVVP +LR LVI+ CHDLP+SG
Sbjct:  229 AKGIFVSTDRIDAIRDVSTPKCIKDLRSILGMANFVRRFAKNYADLTAPLVDLTRKDFVKPRKFREAWGPDQDAAFQQLKDALYSALVLHFPDFSREFVVHTDASELGVGAFLAQPSKDSTGDKAVDIVAYYSKRFKAGQRHYSPTMKECTAVVWALTHWRPYLWGRQITCHTDHQALTYLYHMQDTSNMLTRWAICLQNFDFTVKHVPGKLNVVPDTLSRIFSEIDGKPLPYEPRLAAICRNVPDDQPFRPPAPREYEVSASNLDDIVPVDTERELFSSAMSVFPVFDTAKLLDHQKKEFHQYFDYLDNPTKARVPLHQPKSSMSKFFIHEG---------------EALDQLVVPDTLRKLVINVCHDLPASG 588          
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5KET9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KET9_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 1.370e-144
Identity = 222/375 (59.20%), Postives = 252/375 (67.20%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNVPDDKPF-------------------------------------------------------------SKSPVPPNQSKSSMSKFFLHEGLLCRSYIPAHIRRRAQFRDQLVVPSSLRTLVISSCHDLPSSG 942
            AKGISVSTDRIDAIR+L TP CIKDLRS+LG+ +FVRRF+K+YAD TAPLV+LTRKD+VK   F++AWG  QDAAF+ +K  LSS PVLHFPDFS EFVVH                         D+++F  KRF  GQRHYS TMK+C AVVWALTHWRPYLW RH TC TDHQALTYLYHMQDTSNMLTRWAI LQN+DFTVKHVPGKLNVVPD L RIFSE++G P+PSEP LAAICRNVPDD+PF                                                             +K+ VP +QSKSSMSKFF+HEGLL RSY+P H+RRR  FRD+LVVP SLR LVI+ CHDLP+SG
Sbjct:   85 AKGISVSTDRIDAIRDLSTPKCIKDLRSILGVASFVRRFVKNYADPTAPLVDLTRKDFVKPRKFREAWGLDQDAAFQQLKVALSSAPVLHFPDFSGEFVVHXXXXXXXXXXXXT------------DLLSFV-KRFKAGQRHYSPTMKECTAVVWALTHWRPYLWGRHFTCHTDHQALTYLYHMQDTSNMLTRWAICLQNFDFTVKHVPGKLNVVPDTLSRIFSEIDGKPLPSEPRLAAICRNVPDDQPFCPPVPREYEVSASNLDDIVPVESDRELFSSAMSVFPVVDTAKLLDHQKKEFHQYFDYLESPTKARVPLHQSKSSMSKFFIHEGLLFRSYVPVHLRRRGTFRDRLVVPDSLRKLVINVCHDLPASG 446          
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5K047_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K047_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 3.170e-141
Identity = 196/244 (80.33%), Postives = 215/244 (88.11%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNV 732
            AKGISVSTDRIDAIR+L TP CIKDLRS+LGM NFVRRF+K+YAD+TAPLV+LTRKD+VK   F++AWGP QDAAF+ +K  LSS PVLHFPDFSREFVVHTDASE GVGAF AQPS+DS D K +DIVA+YSKRF  GQRHYS TMK+C AVVWALTHWRPYLW R  TC TDHQALTYLYHMQDTSNMLTRWAI LQN+DFTVKHVPGKLNVVPD L RIFSE++G P+PSEP LAAICRNV
Sbjct:  172 AKGISVSTDRIDAIRDLSTPKCIKDLRSILGMANFVRRFVKNYADLTAPLVDLTRKDFVKPRKFREAWGPDQDAAFQQLKDALSSAPVLHFPDFSREFVVHTDASELGVGAFPAQPSKDSTDDKVVDIVAYYSKRFKAGQRHYSPTMKECTAVVWALTHWRPYLWGRQITCHTDHQALTYLYHMQDTSNMLTRWAICLQNFDFTVKHVPGKLNVVPDTLSRIFSEIDGKPLPSEPRLAAICRNV 415          
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE)

HSP 1 Score: 432 bits (1110), Expect = 3.080e-139
Identity = 251/462 (54.33%), Postives = 257/462 (55.63%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNVPDDKPF----------------------------------------------------------------------------------------------------------------------------------------------------SKSPVPPNQSKSSMSKFFLHEGLLCRSYIPAHIRRRAQFRDQLVVPSSLRTLVISSCHDLPSSG 942
            AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGM                                                RVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMK+CIAVVWALTHWRPYLW RH TCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKH+PGKLNVVPDAL R FSEVNG+ VPSEP LAAICRNVPDDKPF                                                                                                                                                    +KSPVP NQSKSSMSKFFLHEGLLCRSYIPAH+RRRA FRD LV+PSSLRTLVISSCHDLPSSG
Sbjct:  380 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGM------------------------------------------------RVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKECIAVVWALTHWRPYLWGRHFTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHMPGKLNVVPDALSRFFSEVNGDHVPSEPRLAAICRNVPDDKPFCPLSLAITNTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALSRIFSEVNGDHVPSEPRLAAICRNVPDDKPFCPPVPRDYEVSSYNLDETALVESDRELFSSAVSVFPVVDSVKLLDHQKREFRQYFDYLASPAKSPVPSNQSKSSMSKFFLHEGLLCRSYIPAHLRRRAHFRDPLVLPSSLRTLVISSCHDLPSSG 793          
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5K3U6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3U6_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 9.210e-123
Identity = 177/232 (76.29%), Postives = 198/232 (85.34%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVP 696
            AKGISVSTD +DAIR+L TP CIKDLRS+LGM NFV  F+K YAD+TAPLV+LTRKD+VK   F++A GP QDAAF+ +K  LSS P+ +FPDFSREFVVHTDAS  GVGAFLAQPS+DS D K +DIVA+YSKRF  GQRHY  TMK+C AVVWALTHWRPYLW RH TC TDHQALTYLYHMQDTSNMLTRWAI LQN+DFTVKHVPGKLNVVPD L RIFSE++G P+P
Sbjct:  229 AKGISVSTDHMDAIRDLSTPKCIKDLRSILGMANFVLCFVKKYADLTAPLVDLTRKDFVKPRKFREARGPDQDAAFQQLKNALSSAPLQYFPDFSREFVVHTDASALGVGAFLAQPSKDSTDDKAVDIVAYYSKRFKAGQRHYCPTMKECTAVVWALTHWRPYLWGRHFTCHTDHQALTYLYHMQDTSNMLTRWAICLQNFDFTVKHVPGKLNVVPDTLSRIFSEIDGKPLP 460          
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Match: A0A6H5K153_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K153_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 5.290e-117
Identity = 168/250 (67.20%), Postives = 206/250 (82.40%), Query Frame = 1
Query:    1 AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKCIAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNVPDDKPF 750
            A+GISV  DRI A++NLPTP C+KDLRSVLG+VNFVRRFI DYA++T PLVELTRK+Y  ++ F KAW  + DA+F ++KR+L+S PVLHFPDF REFVVH DASE G GAFLAQPS+  AD + LD++A+YS RF  GQRHYSA+MK+C  VV A++HWRPYL+ +H T  TDHQALT+L++MQDTSNMLTRWAIALQNYDFTVKHV GKLNVVPD L R+F E+    +  +P+LA+ICRNVP D+P+
Sbjct:  313 AEGISVGKDRIKAVQNLPTPRCLKDLRSVLGVVNFVRRFIPDYAEITNPLVELTRKEYATKSRFVKAWNKSHDASFAHLKRLLTSAPVLHFPDFDREFVVHVDASEHGCGAFLAQPSK--ADPESLDMIAYYSHRFKHGQRHYSASMKECCGVVLAISHWRPYLFGKHFTVITDHQALTHLFYMQDTSNMLTRWAIALQNYDFTVKHVAGKLNVVPDTLSRLFGEIESETISHKPALASICRNVPSDRPY 560          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13366.2032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LN90_9PHAE2.550e-20580.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXY7_9PHAE1.470e-19476.80RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J8C1_9PHAE1.280e-18667.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK17_9PHAE2.340e-14683.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGF6_9PHAE7.000e-14561.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KET9_9PHAE1.370e-14459.20Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K047_9PHAE3.170e-14180.33Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K112_9PHAE3.080e-13954.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3U6_9PHAE9.210e-12376.29Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K153_9PHAE5.290e-11767.20Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13366contigE-siliculosus-1a_F_contig13366:194..1318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size942
Model size942
Exons2
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelVertebrata
COG Functional cat.L
EggNOG OGs38F42@33154,3BA5H@33208,3CWAK@33213,48QAQ@7711,49KWV@7742,COG2801@1,KOG0017@2759
EggNOG free text desc.K02A2.6-like
Seed eggNOG ortholog7897.ENSLACP00000012703
Seed ortholog evalue3.8e-43
Seed ortholog score182.2
Taxonomic scopeMetazoa
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927855.914024-CDS-E-siliculosus-1a_F_contig13366:193..9441622927855.914024-CDS-E-siliculosus-1a_F_contig13366:193..944Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13366 194..944 +
1696318710.1106243-CDS-E-siliculosus-1a_F_contig13366:193..9441696318710.1106243-CDS-E-siliculosus-1a_F_contig13366:193..944Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13366 194..944 +
1622927855.9324627-CDS-E-siliculosus-1a_F_contig13366:1127..13181622927855.9324627-CDS-E-siliculosus-1a_F_contig13366:1127..1318Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13366 1128..1318 +
1696318710.1244407-CDS-E-siliculosus-1a_F_contig13366:1127..13181696318710.1244407-CDS-E-siliculosus-1a_F_contig13366:1127..1318Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig13366 1128..1318 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13366.2032.1prot_E-siliculosus-1a_F_contig13366.2032.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig13366 194..1318 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig13366.2032.1

>prot_E-siliculosus-1a_F_contig13366.2032.1 ID=prot_E-siliculosus-1a_F_contig13366.2032.1|Name=mRNA_E-siliculosus-1a_F_contig13366.2032.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=314bp
AKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPL
VELTRKDYVKRASFKKAWGPAQDAAFENVKRVLSSTPVLHFPDFSREFVV
HTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKKC
IAVVWALTHWRPYLWARHSTCSTDHQALTYLYHMQDTSNMLTRWAIALQN
YDFTVKHVPGKLNVVPDALPRIFSEVNGNPVPSEPSLAAICRNVPDDKPF
SKSPVPPNQSKSSMSKFFLHEGLLCRSYIPAHIRRRAQFRDQLVVPSSLR
TLVISSCHDLPSSG
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mRNA from alignment at E-siliculosus-1a_F_contig13366:194..1318+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig13366.2032.1 ID=mRNA_E-siliculosus-1a_F_contig13366.2032.1|Name=mRNA_E-siliculosus-1a_F_contig13366.2032.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1125bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13366:194..1318+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCAAAAGGCATTTCCGTCAGTACTGACCGTATCGATGCCATTCGCAACCT GCCCACCCCCACCTGCATCAAAGATCTCCGATCTGTCTTAGGCATGGTGA ATTTTGTCCGACGTTTTATTAAAGATTACGCCGATGTCACCGCTCCGCTG GTCGAACTGACTCGAAAAGATTATGTCAAACGTGCTAGTTTTAAAAAAGC ATGGGGGCCGGCCCAAGATGCCGCCTTCGAAAACGTCAAAAGAGTCCTAT CCTCTACCCCTGTCCTCCACTTTCCTGATTTCTCTCGAGAATTTGTCGTT CACACCGACGCCTCTGAACAAGGCGTAGGCGCTTTCCTCGCGCAACCATC ACGCGATAGTGCCGACGGTAAAGAACTCGATATCGTCGCGTTTTACAGTA AACGTTTTTCAAAAGGCCAACGCCATTACAGCGCTACCATGAAAAAATGT ATTGCGGTTGTCTGGGCCCTGACCCACTGGCGCCCATACCTTTGGGCACG TCACTCTACGTGTAGCACCGATCATCAAGCGCTCACGTATCTGTACCACA TGCAAGACACGTCAAACATGTTGACGCGCTGGGCTATCGCACTCCAGAAC TACGATTTTACTGTCAAACACGTGCCGGGGAAACTCAACGTCGTCCCCGA CGCTCTGCCTCGTATTTTTAGCGAGGTTAACGGCAACCCCGTGCCGTCCG AACCAAGCCTTGCGGCGATCTGTCGCAACGTACCCGATGATAAACCATTC TGTCCCCCGGTTCCACGCGATTACGAAGTGTCTTCACACAACCTCGATGA AACCGCGCTCGTCGAAAGCGACCGCGAATTATTTTCGAGTGCTGTGTCCG TCTTTCCGGTAGTCGATTCTGTTAAACTGTTGGATCACCAAAACCGCGAG TTCCGCCAGTATTTCGATTACCTCGCCACTCCAGCGAAATCACCCGTTCC TCCGAACCAGTCTAAGTCTAGCATGAGCAAGTTTTTCCTTCATGAAGGTT TGCTGTGTCGTTCGTACATCCCCGCCCACATACGCCGTCGGGCTCAATTC CGCGATCAACTCGTGGTCCCATCCTCCCTACGAACCCTTGTCATCTCCTC ATGCCATGATCTTCCCTCCTCTGGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig13366:194..1318+

>mRNA_E-siliculosus-1a_F_contig13366.2032.1 ID=mRNA_E-siliculosus-1a_F_contig13366.2032.1|Name=mRNA_E-siliculosus-1a_F_contig13366.2032.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1884bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig13366:194..1318+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCAAAAGGCATTTCCGTCAGTACTGACCGTATCGATGCCATTCGCAACCT
GCCCACCCCCACCTGCATCAAAGATCTCCGATCTGTCTTAGGCATGGTGA
ATTTTGTCCGACGTTTTATTAAAGATTACGCCGATGTCACCGCTCCGCTG
GTCGAACTGACTCGAAAAGATTATGTCAAACGTGCTAGTTTTAAAAAAGC
ATGGGGGCCGGCCCAAGATGCCGCCTTCGAAAACGTCAAAAGAGTCCTAT
CCTCTACCCCTGTCCTCCACTTTCCTGATTTCTCTCGAGAATTTGTCGTT
CACACCGACGCCTCTGAACAAGGCGTAGGCGCTTTCCTCGCGCAACCATC
ACGCGATAGTGCCGACGGTAAAGAACTCGATATCGTCGCGTTTTACAGTA
AACGTTTTTCAAAAGGCCAACGCCATTACAGCGCTACCATGAAAAAATGT
ATTGCGGTTGTCTGGGCCCTGACCCACTGGCGCCCATACCTTTGGGCACG
TCACTCTACGTGTAGCACCGATCATCAAGCGCTCACGTATCTGTACCACA
TGCAAGACACGTCAAACATGTTGACGCGCTGGGCTATCGCACTCCAGAAC
TACGATTTTACTGTCAAACACGTGCCGGGGAAACTCAACGTCGTCCCCGA
CGCTCTGCCTCGTATTTTTAGCGAGGTTAACGGCAACCCCGTGCCGTCCG
AACCAAGCCTTGCGGCGATCTGTCGCAACGTACCCGATGATAAACCATTC
TGCAAAAGGCATTTCCGTCAGTACTGACCGTATCGATGCCATTCGCAACC
TGCCCACCCCCACCTGCATCAAAGATCTCCGATCTGTCTTAGGCATGGTG
AATTTTGTCCGACGTTTTATTAAAGATTACGCCGATGTCACCGCTCCGCT
GGTCGAACTGACTCGAAAAGATTATGTCAAACGTGCTAGTTTTAAAAAAG
CATGGGGGCCGGCCCAAGATGCCGCCTTCGAAAACGTCAAAAGAGTCCTA
TCCTCTACCCCTGTCCTCCACTTTCCTGATTTCTCTCGAGAATTTGTCGT
TCACACCGACGCCTCTGAACAAGGCGTAGGCGCTTTCCTCGCGCAACCAT
CACGCGATAGTGCCGACGGTAAAGAACTCGATATCGTCGCGTTTTACAGT
AAACGTTTTTCAAAAGGCCAACGCCATTACAGCGCTACCATGAAAAAATG
TATTGCGGTTGTCTGGGCCCTGACCCACTGGCGCCCATACCTTTGGGCAC
GTCACTCTACGTGTAGCACCGATCATCAAGCGCTCACGTATCTGTACCAC
ATGCAAGACACGTCAAACATGTTGACGCGCTGGGCTATCGCACTCCAGAA
CTACGATTTTACTGTCAAACACGTGCCGGGGAAACTCAACGTCGTCCCCG
ACGCTCTGCCTCGTATTTTTAGCGAGGTTAACGGCAACCCCGTGCCGTCC
GAACCAAGCCTTGCGGCGATCTGTCGCAACGTACCCGATGATAAACCATT
CTCGAAATCACCCGTTCCTCCGAACCAGTCTAAGTCTAGCATGAGCAAGT
TTTTCCTTCATGAAGGTTTGCTGTGTCGTTCGTACATCCCCGCCCACATA
CGCCGTCGGGCTCAATTCCGCGATCAACTCGTGGTCCCATCCTCCCTACG
AACCCTTGTCATCTCCTCATGCCATGATCTTCCCTCCTCTGGACGAAATC
ACCCGTTCCTCCGAACCAGTCTAAGTCTAGCATGAGCAAGTTTTTCCTTC
ATGAAGGTTTGCTGTGTCGTTCGTACATCCCCGCCCACATACGCCGTCGG
GCTCAATTCCGCGATCAACTCGTGGTCCCATCCTCCCTACGAACCCTTGT
CATCTCCTCATGCCATGATCTTCCCTCCTCTGGA
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