mRNA_E-siliculosus-1a_F_contig1336.2031.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1336.2031.1
Unique NamemRNA_E-siliculosus-1a_F_contig1336.2031.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5JDR1_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDR1_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 1.800e-112
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 2 
Query:  359 LPRRSTVGIVSIFDQQVSNSIVSLEELPTAGGAGAQGWELCPVVNMLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLAIEPHNGLAPPKWQGGPHNHLGTVAVARTDLRDFTVEDWRVLDDYIYNTIFGVWGMEPSERIQLLPRVCNSQAFARYTAAAGRSQEDEEEAAYGASFGGGFVG 913
            L  RSTVGIVSIFDQQVSNSI+SLEELPTAG  GAQGWELCPVVNMLGVPLAI KV PCACHICLRGNSQIPEPRNQVATRLAIEPHNGLAPPKWQGGPHNHLGTVAVAR DLRDFTVEDWRVLDDYI NTIFGVWGMEPSERIQLLPRVC+SQAFARYTAAAGRSQEDEEEAAYGASFGGGFVG
Sbjct:   60 LQGRSTVGIVSIFDQQVSNSIMSLEELPTAGAPGAQGWELCPVVNMLGVPLAIMKVCPCACHICLRGNSQIPEPRNQVATRLAIEPHNGLAPPKWQGGPHNHLGTVAVARMDLRDFTVEDWRVLDDYICNTIFGVWGMEPSERIQLLPRVCSSQAFARYTAAAGRSQEDEEEAAYGASFGGGFVG 244
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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5JYQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ0_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.960e-27
Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = -1 
Query:  983 PTAVLCLRFLMREEFSTLFPRCTHELALSTGPGAEAREKLTLQEKLAYAWIRTPDLTSRRFRGYQLDHRGDR 1198
            P AVLCLRFLMRE+FST FP CTHELALST PGAEAREKLTLQEKLAYA +RT DLTSRRFRGYQLDHRGDR
Sbjct:  139 PPAVLCLRFLMREQFSTFFPLCTHELALSTRPGAEAREKLTLQEKLAYAGVRTSDLTSRRFRGYQLDHRGDR 210
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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5JMV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV9_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.690e-27
Identity = 58/64 (90.62%), Postives = 59/64 (92.19%), Query Frame = -1 
Query:  977 MREEFSTLFPRCTHELALSTGPGAEAREKLTLQEKLAYAWIRTPDLTSRRFRGYQLDHRGDRLV 1168
            MREEFSTLFP CTHELALST PG EAREKLTLQEKLAYA IRTPDLTSRRFRGYQLDHRGDR +
Sbjct:    1 MREEFSTLFPLCTHELALSTRPGTEAREKLTLQEKLAYAGIRTPDLTSRRFRGYQLDHRGDRCM 64
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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5JD54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD54_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 2.530e-25
Identity = 60/83 (72.29%), Postives = 64/83 (77.11%), Query Frame = -1 
Query:  935 MREEFSTLFPRCTHELALSTGPGAEAREKLTLQEKLAYAWIRTPDLTSRRFRGYQLDHRGDRLVYAL-----IRSLAVGHGHR 1168
            MREEFSTLFP CTHELALST PGAEAR+KLT+ EKLAYA IRTPDLTSRR RGY+LDHRGDRL         IR +   HG R
Sbjct:    1 MREEFSTLFPLCTHELALSTRPGAEARDKLTVHEKLAYAGIRTPDLTSRRLRGYKLDHRGDRLQQTFVFLGKIRGICAAHGGR 83
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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5JFW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFW4_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.600e-24
Identity = 58/65 (89.23%), Postives = 60/65 (92.31%), Query Frame = -1 
Query:  977 MREEFSTLFPRCTHELALSTGPGAEAREKLTLQEKLAY-AWIRTPDLTSRRFRGYQLDHRGDRLV 1168
            MREEFSTLFP CTHELALST PGAEAREKLTLQEKLA  A IRTPDLTSRRFRGY+LDH+GDRLV
Sbjct:    1 MREEFSTLFPLCTHELALSTRPGAEAREKLTLQEKLASCAGIRTPDLTSRRFRGYRLDHQGDRLV 65
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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5L5P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5P9_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 4.550e-24
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = -1 
Query:  983 MREEFSTLFPRCTHELALSTGPGAEAREKLTLQEKLAYAWIRTPDLTSRRFRGYQLDHRGDR 1168
            MREEFSTLFP CTHELALSTGPGAEAREKLTLQEKLAYA IRTPDLTSRRFRGYQLDHRGDR
Sbjct:    1 MREEFSTLFPLCTHELALSTGPGAEAREKLTLQEKLAYAGIRTPDLTSRRFRGYQLDHRGDR 62
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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5L694_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L694_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 8.370e-24
Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = -1 
Query:  974 MREEFSTLFPRCTHELALSTGPGAEAREKLTLQEKLAYAWIRTPDLTSRRFRGYQLDHRGDRLVY 1168
            MREEFSTLFP CTHELALST PG EAREKLTLQEKLAYA IRTPDLTSRRFRGYQLDHRGDRL +
Sbjct:    1 MREEFSTLFPLCTHELALSTRPGVEAREKLTLQEKLAYAGIRTPDLTSRRFRGYQLDHRGDRLSF 65
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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5L041_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L041_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 9.890e-24
Identity = 72/113 (63.72%), Postives = 76/113 (67.26%), Query Frame = -1 
Query:  941 FKSALTALVPFTPTRGHTEEHLSTHPTAVLCLRFLMREEFSTLFPRCTHELALSTGPGAEAREKLTLQEKLAYAWIRTPDLTSRRFRGYQLDHRGDRLVYALIRSLA--VGHG 1273
            F S   ALVPFTPTR          P A+LCLRFL+R EFSTLF  CTH LALST PGAEAREKLTLQEKLAYA IRTPDLTSRR RGYQ         YA +R L   + HG
Sbjct:  808 FPSFFRALVPFTPTRVSPS---LPSPPAILCLRFLLRGEFSTLFTLCTHGLALSTRPGAEAREKLTLQEKLAYAGIRTPDLTSRRLRGYQ---------YASLRELVDTLPHG 908
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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5JZN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN8_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.010e-23
Identity = 54/61 (88.52%), Postives = 55/61 (90.16%), Query Frame = -1 
Query:  986 MREEFSTLFPRCTHELALSTGPGAEAREKLTLQEKLAYAWIRTPDLTSRRFRGYQLDHRGD 1168
            MREEFSTLFP  THELALST PGAEAREKLTLQEKLA A  RTPDLTS+RFRGYQLDHRGD
Sbjct:    1 MREEFSTLFPLRTHELALSTRPGAEAREKLTLQEKLANAGSRTPDLTSKRFRGYQLDHRGD 61
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Match: A0A6H5JLU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLU5_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.840e-23
Identity = 52/59 (88.14%), Postives = 54/59 (91.53%), Query Frame = -1 
Query:  986 EEFSTLFPRCTHELALSTGPGAEAREKLTLQEKLAYAWIRTPDLTSRRFRGYQLDHRGD 1162
            +EFSTLFP CTHELALST PGAEAREKL +QEKLAYA IRTPDLTSRRFR YQLDHRGD
Sbjct:   43 KEFSTLFPLCTHELALSTRPGAEAREKLNVQEKLAYAGIRTPDLTSRRFRSYQLDHRGD 101
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1336.2031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDR1_9PHAE1.800e-11294.59MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JYQ0_9PHAE1.960e-2788.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMV9_9PHAE2.690e-2790.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD54_9PHAE2.530e-2572.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFW4_9PHAE1.600e-2489.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5P9_9PHAE4.550e-2496.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L694_9PHAE8.370e-2490.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L041_9PHAE9.890e-2463.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZN8_9PHAE1.010e-2388.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLU5_9PHAE1.840e-2388.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1336contigE-siliculosus-1a_F_contig1336:26926..31960 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size423
Model size3556
Exons4
Ec32 orthologEc-01_006560.1
Ec32 ortholog descriptionZinc finger, MYND-type
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1336.2031.1prot_E-siliculosus-1a_F_contig1336.2031.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1336 29695..31467 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927855.761136-UTR-E-siliculosus-1a_F_contig1336:26925..291801622927855.761136-UTR-E-siliculosus-1a_F_contig1336:26925..29180Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1336 26926..29180 -
1696318710.0584462-UTR-E-siliculosus-1a_F_contig1336:26925..291801696318710.0584462-UTR-E-siliculosus-1a_F_contig1336:26925..29180Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1336 26926..29180 -
1622927855.779801-UTR-E-siliculosus-1a_F_contig1336:29309..296941622927855.779801-UTR-E-siliculosus-1a_F_contig1336:29309..29694Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1336 29310..29694 -
1696318710.065757-UTR-E-siliculosus-1a_F_contig1336:29309..296941696318710.065757-UTR-E-siliculosus-1a_F_contig1336:29309..29694Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1336 29310..29694 -
1622927855.8602588-UTR-E-siliculosus-1a_F_contig1336:31467..319601622927855.8602588-UTR-E-siliculosus-1a_F_contig1336:31467..31960Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1336 31468..31960 -
1696318710.1005366-UTR-E-siliculosus-1a_F_contig1336:31467..319601696318710.1005366-UTR-E-siliculosus-1a_F_contig1336:31467..31960Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1336 31468..31960 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927855.806213-CDS-E-siliculosus-1a_F_contig1336:29694..298861622927855.806213-CDS-E-siliculosus-1a_F_contig1336:29694..29886Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1336 29695..29886 -
1696318710.0728629-CDS-E-siliculosus-1a_F_contig1336:29694..298861696318710.0728629-CDS-E-siliculosus-1a_F_contig1336:29694..29886Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1336 29695..29886 -
1622927855.8188658-CDS-E-siliculosus-1a_F_contig1336:30554..306861622927855.8188658-CDS-E-siliculosus-1a_F_contig1336:30554..30686Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1336 30555..30686 -
1696318710.0818298-CDS-E-siliculosus-1a_F_contig1336:30554..306861696318710.0818298-CDS-E-siliculosus-1a_F_contig1336:30554..30686Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1336 30555..30686 -
1622927855.8357546-CDS-E-siliculosus-1a_F_contig1336:31368..314671622927855.8357546-CDS-E-siliculosus-1a_F_contig1336:31368..31467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1336 31369..31467 -
1696318710.091135-CDS-E-siliculosus-1a_F_contig1336:31368..314671696318710.091135-CDS-E-siliculosus-1a_F_contig1336:31368..31467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1336 31369..31467 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1336.2031.1

>prot_E-siliculosus-1a_F_contig1336.2031.1 ID=prot_E-siliculosus-1a_F_contig1336.2031.1|Name=mRNA_E-siliculosus-1a_F_contig1336.2031.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=141bp
MLGVPLAIKKVSPCACHICLRGNSQIPEPRNQVATRLAIEPHNGLAPPKW
QGGPHNHLGTVAVARTDLRDFTVEDWRVLDDYIYNTIFGVWGMEPSERIQ
LLPRVCNSQAFARYTAAAGRSQEDEEEAAYGASFGGGFVG*
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mRNA from alignment at E-siliculosus-1a_F_contig1336:26926..31960-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1336.2031.1 ID=mRNA_E-siliculosus-1a_F_contig1336.2031.1|Name=mRNA_E-siliculosus-1a_F_contig1336.2031.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5035bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1336:26926..31960- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACGAGACCCTGCAAAGAGGGAATCGTCCTCGACAGTCGTTGGGGAGATT
ATATGTACCCTTTATGACGAGGATCTCTACTATTTTTTTATTTGAATGAA
CTTCGCACGGGGGTGCGCTGATTCCGGAAAATCCCTACCTGGAGATGCGG
AACTGCCTGACTCTGTCTTTTTTAGTTTGGCTGTCTTTTTCCTACGAATC
TCGTCACGAGCTAAAACGCTGTTGATCCGTAGTTCCGTTCAGCTGTCTCT
CGCACTAGTAGCTGTCCCTCATTCTCCCTCCTCGTCCTCCTCCTCCTCCT
CCTCCTCCGTTCTCCTCTGTGCCGTCTGCACCCCTTCTCATTCGCCCTCC
CCTTGCCTCTCCCTAGACGCTCAACTGTAGGCATCGTGAGCATCTTCGAC
CAGCAAGTCTCCAACTCCATCGTGAGCTTGGAGGAGCTGCCCACGGCCGG
GGGGGCGGGCGCTCAAGGCTGGGAGCTGTGTCCCGTGGTGAACATGCTCG
GCGTGCCCCTCGCCATCAAGAAGGTCTCCCCCTGCGCGTGTCACATTTGC
CTGAGGGGGAACTCGCAGATCCCGGAGCCCCGCAACCAAGTGGTGAGGGA
GACATGCGTCGATCCACTCATGCTGTACCCTAGAGAAGACAACGGTGTTG
CAGATGCGGGGCAAAAAAATAAAAAATTATCTTGCATGCTCCGTGCCCAA
CACCTTGTTTCCAGTCGGGCGAGTTCGTTGTTTGGTTGGTTTGGCTACAT
TGGTTGCGGAAGTAGGGATCGGTCCAATCCGGGGTGTTCTGAGGGTGCCG
GCGAGACGCATGTGTGTGCCGGTGACGGTGGCGGGAGGCACTCGCTCCTT
CGCCCCGGGGGTCTCGGTGGTGCCAAATTCGACTGTATGGCAAGTCTACA
CTAGTATCATACAACAATGGTGGGTTTGGAGAGGGCATATGAGGCGAAAG
ACGGCGAGTGAACCTCGGCCTTGCATTCTTGGGTATATTTTCTGTCAATC
GCGGGGTGTATGTCCGCTCGAGTGACTCTTCCTCAACAAAGGACTCCTGC
GATGATACTGCTTCATATTTTTTGTGGCCAGTGTATAAGTGTCGTCGAAC
CCTTGGGAGCCTCTTCTTGGTCTCTTTGTCTTGCCATCACCAAGCTTGTT
CGAATGCACTGCTGCAGTACCGGTTGACGTGTGCATTTCTCCCGCTCTTG
ACGGCTGATCCCGTTCCATGCCCGAATCGAATGGTTTGCCTGTGCCACCT
CGCCGTGTTGTGCCGCACGCGAAGGCTACGAGGTTGGCGATCGAGCCCCA
CAACGGCCTGGCTCCGCCAAAGTGGCAGGGCGGGCCTCACAACCACCTTG
GCACCGTTGCCGTGGCAAGGACGGATCTCAGGGACTTCACAGTGGAGGAC
TGGAGGGTGAGTGAACTACCTGGCGCCATGGGTATGCATGCCGCTTACGC
TGCAGCTGCGTGCACTATGGTAGATATACCAACGGTTGTGCATTTTCGTG
TTGGGCCTGGCTTGTTGCATGCTACAACGTCGTACACGCAAGCGCTTTTT
TTTCTTGGTGTGCCGTATGATTCCTGATGGTGTTTCATTCGAAAAACGGA
TGTCTCGCGTTCCTTTGCCCGTTTTGGTATTTTTTCCTACCAGATTAAAG
AAGACATTTCGTCCTAGTTTTAGCCGTTTTGACACCGATGCCGTCACCCC
CCGCTTCACCCTCACACACTCCTCTCTGTTGGCCGTAACTAAGACGAGCA
CATCATGTGGGTGTTTTCCTCCTCGCAACGTTCCGACTACACCATCACGC
CAGACGCTCTCGATGCCCATCTCTGCAGATGCCAAGCACGGCAGTAGCCT
TTGCTCCCTCCTGGCTCGCCCTCGTACTTTTTTTTTTCCAAGCTTTTTTT
AGATTTCCATCTTTCCTTCCTTTTTACGGCCGTGAACACAACGTTCCGCG
AAAAACAATGCTTTCGAGGAAGACGTTGGTTTGGCTGGCTTGGGCCGTGC
GCTCCCATCCCATCGCGCCCGGACACCCCCCCAGATCCTTACGCCGGCGC
CACTACCCAAATAATCCCCTCCAGGTTCTCGACGACTACATTTACAACAC
CATCTTCGGCGTGTGGGGGATGGAACCCTCCGAGCGCATCCAGCTTCTCC
CGCGTGTCTGCAACAGCCAGGCCTTCGCCCGCTACACGGCCGCCGCCGGT
AGGAGCCAGGAGGACGAGGAGGAAGCGGCCTATGGCGCGTCGTTCGGGGG
CGGGTTTGTCGGATAACGCGGTTGAGCGGGCTGGACGATGCCCGTGGCCG
ACAGCGAGCGACCTGATCAAAGCATATACAAGCCGGTCGCCCCGGTGGTC
TAGTTGGTAACCTCGAAACCTTCTAGAGGTCAGGTCAGGGGTTCGAATCC
AGGCGTAAGCGAGCTTTTCTTGCAAAGTGAGTTTTTCTCTCGCTTCCGCT
CCTGGCCCAGTGGATAGCGCTAGTTCGTGTGTACACCGAGGGAAGAGAGT
GCTGAACTCTTCTCGCATTAAAAATCGTAGGCAAAGTACCGCAGTAGGGT
GGGTAGATAGGTGCTCTTCTGTGTGACCACGGGTTGGAGTAAACGGCACT
AGTGCTGTGAGCGCTGATTTGAAGTGAAGCCAAAAAAAAAAAAAAAAATC
AGCGATGTCGGCACACGGGGGACAACGNNNNNNNNNNGGGCTTGTGGGGG
GGACAACGGGGTGGAAAAAACGGAACAAGGGCTGAAAGCGCGAATTCGAA
ATAAAAAAAAAAAAAAAAAAAAAAAATCAGCGATGTCGGCACATGGTGAA
AAACGCCTGTGGGCCGGCAGTGACCTGATGTGTCTGCGATAACGGCACAC
ATGGTGACCATAAGGTGTCACCCAAAAGTGTATGCTGTACCTTGAAGCCT
CTAGCCGCGGCATTAGATGGCGTCGAGTCAGGGCGGCGTCGAAGGAAGTA
CCTCGTAAGCTTGTTGAGTTTGAGCGGCGGCGGCGGCGGCGGCGGCTTCT
GAAATTTGGTTGTTGCCGTGTTTTTGGCTGCGAGGTTCGTTTTCTCTTGA
TGCCAAGGAGAATGTCGTCGACGTGATGGAGTGAAGGCTCTCTCTTGTCG
GTTCCTTGGCGTTGTTGTACGTGTGTGCGGGTGTGCAAACAAGCTAAGCT
TCCAAAACATGGCGGGGGGGGGGGGGGGGTGTGATGCATGTTGGGTGTGT
ATTGGATGGGTTTTGTGGTTAGGACAGCGTTTGTTTAGTACCGGTTAGTT
GCGGTGTGCACGTCAAGGAACATTTTTAGTAGTCGTTTTGCAGTCTCAGA
AGTTGTTGCACCTTATTAGTTATGCGTAGGAACGATGGATATGCACATGA
GCCCTCCGTCTGGCTCGCACATCATCGACAAAGCTGGCACGAGTAGGCCG
ATTGGGCGACATTTTTCTCCCTCTGGCGGTGTTGTCTCCTGTCACGGAGC
GCTCGCAGAAAAACACGTGTGGCTCTGGCACACGATCACGCATCCCCCGC
GCGAAGTCTTGGGGGCGTTTTGGTGAAAGAAGCGGCGAGACAGGGCGAGC
ATCTCTCGAATTCCTGTTGCCGTTGCCCTTGTTCCTTCCTGTGATACTTT
TTTTACTTCTGGTGGCGGTGGTTTAGACGTGAGTTTCCGCCCCCGTGCTT
GTTTTCCTGCCGGGTGTCGGGTCGTGCTTTCTTTGTAGGCGGCGCTCGGG
GGCGAGCACGTGCCGCTGCATCTTGTGGTCGTGTCGTCGTACACGCGATA
GGGAGCGTTGGAGGTTTGCTTGGCGTGAAGAGGCGTTCAGAAGGATTGAG
CGTGGGCTATGTCTGCCAAAGAAGCGTTGGCGGTTTGCTTCGCGTAAAGA
GTCGTTCAGATGGATTGAGCGTGGGCTATGGCTACCGGGTGGTGTCTCGT
GTAGGATAAGGTAGCAGTGACCTACCTACCCCGCAAGAGGGCTCATGAGA
GACAGGGCTCGTGGGAGATCGAACCGTGGCGGTGGTTGGTTGGTGTACTG
TCCCAGGTATCGCATGTACCAGTTTTGAGTGTTTGGGGCAAGTATGATGG
TGGTAGCAATTCGTTGCAGTAGCAGATAAGTGGGTAACCCGAGTAAAGCG
ATAGAGAAGAAGAGTACGTTTGTTTGTGTCACGGGCGGTGTTTTGTCGTA
GTAGTGCGCTGTGTATACTGCTACCTGTCTTTCGTATGACAGGTAGATGC
TAGTTTTGTGACTCGCTTCATGCGCGTTTTTGATTCGTTGCGTTCTCTCC
TGTCGATGTTGGTGGTGCAAGTTTTGGCTTCGATTTTTCGTCGTTCATAT
ACCTAGGCGCTCTACGCCGCGCCATCAGTTTCTAGCATTCCGGTAGTCGA
TCGACGAGTAGTTAAGGTTATTATTCTCTTTGGTAGTTAGTTGTGTGGTT
GATTGTGCGCGCTCAACGCCACAGATGTGTTCATTGTTGTATGTGCCGGC
AACATCTTCGTTTCCGATATTTTTTTATTTGTACAAACCTTGGGCGGTTG
TCTGTTGTTGTTCTTGATGATGAACACTGATGTTGTTGCTGATCCTACTC
GGGTGTTGTTGTTGTGGGTGTGTGCTGCTGTTGCCGTGGATCGAGGTGGC
ACCATCAAACGCGTTTCGATCCTAGGCCAGTGCCTTTCGCAGCTTTCTTT
ATGGACTGACGATAAGACATGAGAGTAAAGGGTCGTAATAGTATCAACAT
CAGATGATGATTTTGAATTGTAGGTGAAACGCGTAGCAGAGGGAAAGCAG
GAGGTGTTGTTATGGGGAGAAGTACAGTAGACGGATAGCATGTAGTGCGT
GTAGTGAGGTGCACTTTTGTGTTGTGTTTCACGAACACGATTGAACCTCG
TCCTTGGTGAACGTAACGAATACACTTGATTGATTGATTCGTCATTTTTA
GTTTTTTGTTGCACAGTAGATGAGAGCGATCGTCTTCGTCTTTGTATTTT
TGTCATTAGCATCGACCGCGCTAACCGGCTGACCAATGAAAAGACGTCAT
TCTCAGTGCGGTTGGAAACACAAAACACTTCTAAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1336:26926..31960-

>mRNA_E-siliculosus-1a_F_contig1336.2031.1 ID=mRNA_E-siliculosus-1a_F_contig1336.2031.1|Name=mRNA_E-siliculosus-1a_F_contig1336.2031.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=846bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1336:26926..31960- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTCGGCGTGCCCCTCGCCATCAAGAAGGTCTCCCCCTGCGCGTGTCA
CATTTGCCTGAGGGGGAACTCGCAGATCCCGGAGCCCCGCAACCAAGTGA
TGCTCGGCGTGCCCCTCGCCATCAAGAAGGTCTCCCCCTGCGCGTGTCAC
ATTTGCCTGAGGGGGAACTCGCAGATCCCGGAGCCCCGCAACCAAGTGGC
TACGAGGTTGGCGATCGAGCCCCACAACGGCCTGGCTCCGCCAAAGTGGC
AGGGCGGGCCTCACAACCACCTTGGCACCGTTGCCGTGGCAAGGACGGAT
CTCAGGGACTTCACAGTGGAGGACTGGAGGGCTACGAGGTTGGCGATCGA
GCCCCACAACGGCCTGGCTCCGCCAAAGTGGCAGGGCGGGCCTCACAACC
ACCTTGGCACCGTTGCCGTGGCAAGGACGGATCTCAGGGACTTCACAGTG
GAGGACTGGAGGGTTCTCGACGACTACATTTACAACACCATCTTCGGCGT
GTGGGGGATGGAACCCTCCGAGCGCATCCAGCTTCTCCCGCGTGTCTGCA
ACAGCCAGGCCTTCGCCCGCTACACGGCCGCCGCCGGTAGGAGCCAGGAG
GACGAGGAGGAAGCGGCCTATGGCGCGTCGTTCGGGGGCGGGTTTGTCGG
ATAAGTTCTCGACGACTACATTTACAACACCATCTTCGGCGTGTGGGGGA
TGGAACCCTCCGAGCGCATCCAGCTTCTCCCGCGTGTCTGCAACAGCCAG
GCCTTCGCCCGCTACACGGCCGCCGCCGGTAGGAGCCAGGAGGACGAGGA
GGAAGCGGCCTATGGCGCGTCGTTCGGGGGCGGGTTTGTCGGATAA
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