mRNA_E-siliculosus-1a_F_contig1336.2028.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1336.2028.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1336.2028.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: D7FQD4_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD4_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 7.040e-114
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 3

Query:   36 MASRITESKLQEISDCFNEFSDNKSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSYWIPTIREHDDQPASNGAGTAKGTPPQASLLNRAQRT 581
            MASRITESKLQEISDCFNEFSDNKSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMF+ESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDL QV+SEVFSESEMPPVKVAEMFSEADWDGSGRV     WIPTIREHDDQPASNGAGTAKGTPPQASLLNRAQRT
Sbjct:    1 MASRITESKLQEISDCFNEFSDNKSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFVESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGRVD----WIPTIREHDDQPASNGAGTAKGTPPQASLLNRAQRT 178

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: A0A6H5JF19_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF19_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 1.070e-39
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 3

Query:  231 MSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGR 455
            MSRDMF+ESMGRRLALVDPAE+LRQIFKAFDRGCRGFITRDDL QV+SEVFSESEMPPVKVAEMFSEADWDGSGR
Sbjct:    1 MSRDMFVESMGRRLALVDPAEDLRQIFKAFDRGCRGFITRDDLRQVLSEVFSESEMPPVKVAEMFSEADWDGSGR 75

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: A0A7M7HGX1_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HGX1_STRPU)

HSP 1 Score: 102 bits (254), Expect = 3.500e-22
Identity = 56/135 (41.48%), Postives = 84/135 (62.22%), Query Frame = 3

Query:   72 ISDCFNEFS-DNKSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 473
            +   FNE   D K +L ++DLKVAV  L+G++PSKF+V +++     ++   PGM+ + FI +M  +LA +DP E +RQIF AFD  CRGF+T +D+ +    V    ++ P +V + FSE D DG GRV  R +
Sbjct:    2 LESTFNECDEDEKGFLSREDLKVAVVRLIGYKPSKFEVDELM-----KNIDGPGMTSNEFISAMKPKLAALDPDEHIRQIFVAFDSKCRGFLTMEDVEKACKLV--APKIQPHRVQKAFSELDGDGDGRVSYRDF 129

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: UPI001402C7B1 (EF-hand calcium-binding domain-containing protein 11 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402C7B1)

HSP 1 Score: 99.8 bits (247), Expect = 5.010e-21
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 3

Query:   18 YPVPEDMASRITESKLQEISDCFNEFSDNKS-YLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 473
            YP P +   R+T+S+    +  F E   ++S YL ++DLKVAV ++ G++PSK +   ML  +  ED   PG+  D F   M  +LA +DP EE RQIF AFD  CR F+T +D  +  ++V     +    V E F E D D  GRV  R +
Sbjct:    2 YPQPREQR-RVTDSEKSRCAAVFRECDSSRSGYLSREDLKVAVVSMFGYKPSKMETD-MLMTSVPEDNHLPGLPLDQFTSLMCSKLAAMDPYEESRQIFSAFDVHCRSFLTVEDFKRAFAKV--APHLSEQTVLEAFREVDRDSDGRVSFRDF 150

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: A0A8C9RT06_SCLFO (EF-hand calcium binding domain 11 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RT06_SCLFO)

HSP 1 Score: 99.0 bits (245), Expect = 1.140e-20
Identity = 52/144 (36.11%), Postives = 81/144 (56.25%), Query Frame = 3

Query:   45 RITESKLQEISDCFNEFSDN-KSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 473
            +IT+S  ++ +  F +  +  K YL ++DLKVAV  L G++PSK +   ++      D   PG+  D+F+  MGR+L+++DP E+ R IF AFD  CRGF+T +D  +  S V     +P   + E F E D D  G +  R +
Sbjct:   14 KITDSDKKKFAMVFQQCDEGRKGYLSREDLKVAVVQLFGYKPSKMETNSLMEPVLKAD--LPGVPLDLFVSLMGRKLSVLDPYEKTRHIFNAFDAHCRGFLTLEDFRRAFSRV--APRLPDRTIQEAFREVDRDSDGHISFRDF 153

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: UPI001EEC951A (EF-hand calcium-binding domain-containing protein 11 isoform X6 n=4 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEC951A)

HSP 1 Score: 98.6 bits (244), Expect = 1.640e-20
Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = 3

Query:   45 RITESKLQEISDCFNEFS-DNKSYLDKDDLKVAVTALLGFRPSKFDVQQML-ALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 473
            RIT +  ++    F++   + KSYL ++DLK+AV  L G++PSK +   ML A AT   P CPG+S + F+  MGR+L+  DP E+ R+IF+AFD  CRGF+  +D     + V     +P   V E F   D D  G +  + +
Sbjct:   16 RITAADRRKFVSVFDQCDVEKKSYLSREDLKIAVVMLFGYKPSKSETSMMLEACAT---PNCPGVSLEQFVSLMGRKLSAGDPYEKTRRIFRAFDLHCRGFLKVEDFRSAFARVVPR--LPERTVLEAFRHVDHDSDGHISFKDF 155

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: UPI001602CDB0 (EF-hand calcium-binding domain-containing protein 11-like isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001602CDB0)

HSP 1 Score: 98.6 bits (244), Expect = 1.830e-20
Identity = 55/143 (38.46%), Postives = 86/143 (60.14%), Query Frame = 3

Query:   48 ITESKLQEISDCFNEF-SDNKSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 473
            +TE + + I+  F+E+ +  K YL+++D+KVA  +L G++PSKF+V Q+   AT  + +   +  D FI+ M  ++   D  EE+RQ+F AFD  CRGF+T DDLL+  S+V     +P  ++   F E D DG  RV  R +
Sbjct:   19 VTEQERRMIAAAFHEYDAGQKGYLNREDVKVATVSLFGYKPSKFEVDQVFKNATEVNGEHV-LELDPFIKVMSSKMVAQDKDEEIRQVFLAFDTHCRGFLTLDDLLRACSQV--APHIPRHRMEAAFREVDSDGDSRVSYRDF 158

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: UPI0014553593 (EF-hand calcium-binding domain-containing protein 11-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553593)

HSP 1 Score: 97.4 bits (241), Expect = 4.350e-20
Identity = 50/125 (40.00%), Postives = 77/125 (61.60%), Query Frame = 3

Query:   99 DNKSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 473
            D K Y+ + DLKVA+  L G++PSK++V QM++ +T+ +    G+ +D F+ +M  ++A  D  EE+RQ F  FD  CRGFIT +DL +  +EV   +  P  ++  +F E D DG GRV  R +
Sbjct:   37 DKKGYMSRQDLKVAMVILFGYKPSKYEVDQMMSGSTSSE----GVMQDHFMSAMESKMAAQDLDEEIRQTFMTFDTHCRGFITLEDLYKAFNEVAPHT--PRHRIDSLFREIDRDGDGRVSYRDF 155

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: UPI001BB1A9ED (EF-hand calcium-binding domain-containing protein 11-like isoform X1 n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1A9ED)

HSP 1 Score: 95.9 bits (237), Expect = 1.120e-19
Identity = 51/125 (40.80%), Postives = 78/125 (62.40%), Query Frame = 3

Query:   99 DNKSYLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSY 473
            DNK +L ++D+KVAV  L G++PSKF+V +++     ++   PGM+ + F  +M  +LA  DP E++RQIF AFD  CRGF+T +D+ +    V    ++ P  + + FSE D DG GRV  R +
Sbjct:   26 DNKGFLSREDVKVAVVRLFGYKPSKFEVDELM-----KNIDGPGMTLNEFKSAMKPKLAAQDPDEKIRQIFVAFDSKCRGFLTLEDVEKACKLV--APKIQPHHIQKAFSELDGDGDGRVSYRDF 143

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BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Match: W5MRE1_LEPOC (EF-hand calcium binding domain 11 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MRE1_LEPOC)

HSP 1 Score: 95.1 bits (235), Expect = 2.600e-19
Identity = 54/155 (34.84%), Postives = 84/155 (54.19%), Query Frame = 3

Query:   45 RITESKLQEISDCFNEFSDNKS-YLDKDDLKVAVTALLGFRPSKFDVQQMLALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCRGFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSYWIPTIREHDDQ 506
            +I+E+ +++ +  F +  ++K  YLD++DLK+A+  L G++PSK +    L L        PG+  D FI  MGR+L++ DP E+ RQIF AFD  CRGF+T +D  +  S V   + +    V E F E D D  G +  +          DD+
Sbjct:   14 KISETDIKKFTSVFQQCDESKKGYLDREDLKIAIVMLFGYKPSKSETD--LLLHPVLQANLPGVPLDHFINLMGRKLSVQDPFEKTRQIFTAFDVHCRGFLTLEDFRKAFSSV---AHLQDQTVQEAFREVDRDSDGHISFKDLESVLTYGQDDR 163

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1336.2028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQD4_ECTSI	7.040e-114	95.60	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A6H5JF19_9PHAE	1.070e-39	94.67	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A7M7HGX1_STRPU	3.500e-22	41.48	Uncharacterized protein n=1 Tax=Strongylocentrotus...	[more]
UPI001402C7B1	5.010e-21	38.56	EF-hand calcium-binding domain-containing protein ...	[more]
A0A8C9RT06_SCLFO	1.140e-20	36.11	EF-hand calcium binding domain 11 n=1 Tax=Scleropa...	[more]
UPI001EEC951A	1.640e-20	37.93	EF-hand calcium-binding domain-containing protein ...	[more]
UPI001602CDB0	1.830e-20	38.46	EF-hand calcium-binding domain-containing protein ...	[more]
UPI0014553593	4.350e-20	40.00	EF-hand calcium-binding domain-containing protein ...	[more]
UPI001BB1A9ED	1.120e-19	40.80	EF-hand calcium-binding domain-containing protein ...	[more]
W5MRE1_LEPOC	2.600e-19	34.84	EF-hand calcium binding domain 11 n=1 Tax=Lepisost...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1336	contig	E-siliculosus-1a_F_contig1336:10907..17238 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	813
Model size	1501
Exons	8
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko00001,ko01009,ko03036,ko04131,ko04147
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	DTZ
EggNOG OGs	COG5126@1,KOG0027@2759
EggNOG free text desc.	Ca2 -binding protein (EF-Hand superfamily
GOs	GO:0003674,GO:0005488,GO:0005509,GO:0043167,GO:0043169,GO:0046872
KEGG Pathway	ko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
KEGG ko	ko:K02183,ko:K16465
Preferred name	EFCAB11
Seed eggNOG ortholog	2880.D7FQD4
Seed ortholog evalue	1e-92
Seed ortholog score	346.7
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1336.2028.1	prot_E-siliculosus-1a_F_contig1336.2028.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1336 11560..17203 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927855.1924016-UTR-E-siliculosus-1a_F_contig1336:10906..11559	1622927855.1924016-UTR-E-siliculosus-1a_F_contig1336:10906..11559	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1336 10907..11559 -
1696318709.8238354-UTR-E-siliculosus-1a_F_contig1336:10906..11559	1696318709.8238354-UTR-E-siliculosus-1a_F_contig1336:10906..11559	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1336 10907..11559 -
1622927855.3530822-UTR-E-siliculosus-1a_F_contig1336:17203..17238	1622927855.3530822-UTR-E-siliculosus-1a_F_contig1336:17203..17238	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1336 17204..17238 -
1696318709.9008763-UTR-E-siliculosus-1a_F_contig1336:17203..17238	1696318709.9008763-UTR-E-siliculosus-1a_F_contig1336:17203..17238	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1336 17204..17238 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1336:10907..17238-
coding sequence from alignment at E-siliculosus-1a_F_contig1336:10907..17238-

protein sequence of mRNA_E-siliculosus-1a_F_contig1336.2028.1

>prot_E-siliculosus-1a_F_contig1336.2028.1 ID=prot_E-siliculosus-1a_F_contig1336.2028.1|Name=mRNA_E-siliculosus-1a_F_contig1336.2028.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=271bp
MASRITESKLQEISDCFNEFSDNKSYLDKDDLKVAVTALLGFRPSKFDVQ
QMLALATAEDPQCPGMSRDMFIESMGRRLALVDPAEELRQIFKAFDRGCR
GFITRDDLLQVMSEVFSESEMPPVKVAEMFSEADWDGSGRVGTRSYWIPT
IREHDDQPASNGAGTAKGTPPQASLLNRAQRTPAGDQKTWGARGRGGWRG
LDAAVFSFLSAFAAAAAAFFWRGWCSATTAAVCCCRDRYRWRWPFWSVAF
TKASLVIGCSHLPCHGRLLW*

mRNA from alignment at E-siliculosus-1a_F_contig1336:10907..17238-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1336.2028.1 ID=mRNA_E-siliculosus-1a_F_contig1336.2028.1|Name=mRNA_E-siliculosus-1a_F_contig1336.2028.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6332bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1336:10907..17238- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GACAAGCCACGTATCCATATCCTGTCCCTGAGGATATGGCGTCCCGAATA
ACGGAGTCAAAGCTACAAGAGATCTCCGACTGTTTCAACGAATTCAGCGA
CAACAAGAGTGAGTTGCAGTTTTCAACACAGGAAACGGCATTCTTGTACT
GCTGAGATGCCGTATATATACAGCCACTCCTTTGTCAAAAGGCTGGGTGC
CAATTCAGGACGGGTCCCTTGGAGAAATTCAAGGATCCGGCACATCTCTC
TTTGATGATATCATGTGAAGTAGAAGGACGTCTATTTTTTCCAAGATACA
GCAACAGTTGGCAGTAAGGTCGTGTTGTAGACTCCATCCAGTACTTACAA
TCTTCCCATACAGGTTTGCATCCATGTTTCCCTCGCCACAGCCGTTGTCT
TGTTCGGATTCGTTGCCCTACGGCACTTGTTGGTAGCGGCTTTTTTCAGA
GTATTATGGATATTGTGTAATTTCCTGGCACGGTGGCTTAGAGGCTGTGT
CGTCGACGTCGAGGTGATGACACGTGCGAGAGGGTAGCCTGGAAAACGAG
AGTCCTTCCAAGTGTGAAGAAGATGTTGAGATATTGTGACACTGTCGCTT
TGTTGGCCAACACACACAGATATAAACCGCAGAATATGCAGGAGCCCAGA
GGACGGCTGGTTCCCAGAGATTATCAATGCAGTTATGATGCCATAACCAT
CCGAACGGATCACACGAGAGAGTGAGCTACTCGGCTAGCAAGCAGAGAAT
CCGGCGGTAATCCTCCGCATACACGTACGTACGTTTATTCGAACCGACAC
ATATTTTGTATGAGATCTACGATTACAAGAGCAGTGCTACTGAACATTGA
CATACTGGCTATGTGCTAACATTTCCATAACACAGAGGGATGTATTCGGT
CTGTTAGTGAATCTTTCGGTCTAACCGATGTTGAACCTAGCAAGGCTAGG
TTCCTCACACGAGCAAGGTTACGTTCCTCACCCCAACCCAACCCAAACCA
ACCCAAATGGTGCGCAAGTTCTTAGATCATATATTTTTTTGGGCTCAACT
TATTAACTCCGGGGTCTTAAGCCCGGGCGCGTTCTGTAGTTGTAGCAGTA
TTGCTCCAGTCGCTTGTTCGGACGCTGGATGCCCGGCGTAAACTACATGT
ACGGTATTGACCAACGATGGTACCGCACGAGTTGAGGTCTAGATGTAATC
TGTAGCAACAGTGCTGTATGTGCCTACGTTGCAGGAACCCACTCTTCCAG
ATGCGTTTTGCTGTGCTCGCACGATTTATACTTCATGTGCGCCTTCAGTA
GTTTTCTGCGTATGGGAACAAGCACCCCGATCCGCAATGCGCTGTTTTCT
CTGCAACACCCTTTCTATTTCCCGACACAGGCTACCTGGACAAGGACGAT
CTCAAGGTGGCGGTGACCGCTCTGCTGGGATTTCGACCGTCGAAGGTACG
ACCTACCATCTATTCTGCATCTATTGCTGATTGGGAGTGACGAAGACGCG
GAACAGATAGTGGTATGATTCGAAAACGTCCATCACAGTTCAGGCTGAAA
TTTGCGACTCGTACGTGTAGTTTGATAGGAACGAGCACTTGCAAATCATC
GGTCCGGGGGGGGGTCACAGCCTGAGCAGGGGTGTCAATCACTGCATGGT
GCATGTGTTGCCAGGACGGCTGTCACTCGCTTAACGAGCCATGTGTTCGT
CGCTTGCAATCTCCCTCTTTGCGTGCGCTACAGTTCGATGTTCAACAAAT
GCTAGCTTTGGCAACGGCAGAGGATCCGCAGTGTCCAGGTAACCCAAACA
CCAAGATGCCGACTGTCGATAGAAACGTCCTGTGTAAAAATGCCTTGATT
TCGCGTCAAGCCCAACACCCCTCGTAGACGTGTTGATTTGTCAGCAATGG
CCACACGTCCTCATGTTATGGCATGACAGGTGGGACCTGACCGAAGAGTT
TATGTGACGTTCATCCTCGATGGGAACCTTCTTTGCTCCAGTAGGACTAC
AATACCGAAAGTATTTAAGTATTATCGGAGTCTTCGCACTCTGTGTGTGA
TCATTTTATTTTTTTATCGTTTCGCTCTGAAACTTTTCGCACACGGGTGT
CAAGACTCCGATCCCTTGTGCCAAGACTCCCGACACCTGTGCGATAATCG
AGTCGAACCGCTCGGCTCTTGATTTCTTTCCGCTCCCTTGTGCCAAGACT
CCGATCGGTGCCAAGACTCTGATCCGTGCCAAGGATCCGACACTTACGGT
ATTATGGATATGTAGAGATTAGGTACCGCTGGAGCACATAAAGAGTTGTA
TGGCAAGATGCGATCTGAGTGGAGTGTCTTGATCGCATCTTATCGACCTT
TGGTCAGCAAGAACCCCCGCTCTGCATATGACTCTTTCAAATCCACCTGC
TGAGATAGGGAGTGGGGAGCGTTCCAACAACTCGGCCGAGTCCGTTCTCC
TTGCTAAAGCTCAAAAAGAAAACTGCCGGCCCCTGGTAATGGATGAATAC
TGATGCCATGACCTGGGTCTCCTTCTAACTAGAGGGTAGCCTGTCCTCCG
TATGCCCAAACGCCGAACACGTTGTTTTTCACAGTGTTCGATAGCATGTG
CACTTCTCGGTGCCTCGCCGAGGTCGTGGCTAGAGAACCTTCGTAAATAG
ATCACTTAGAATGCGATACATTGTGAATTTGTCGTGCCCTTCGCAATGGT
ATATAGGGGACACAACTGATGTGGCTTTCCACTGCATCTGGATCTTTGGA
CGCAGACACTTCGTATGTTAATCATGTACAACCAATGTCCTCGTGCCGCC
CTGCTTTCGTGGCGCTCTTTTGGCTGTTGCAAAACGAGCTGCTCGGAGGA
CCGATAGCGCACGTGAGGTGCTACAAATACCGCACACATCCCCTGTAGGA
CCACTCAGACATGGCGTCACCTCAAGCTGCCTCCCTGACCATCTTTCGTG
GAAGTGCCCGGTACGTCGTCCTGAGAAAGTTACACCAGCGCGGCACGTGC
ACGCTTTCCGTCTGCTGGCTTCTCGCGGACAGGGATGTCTAGAGATATGT
TTATCGAGTCCATGGGCCGTCGCCTCGCCCTGGTCGATCCGGCGGAGGAA
TTGCGCCAGATCTTCAAAGCCTTTGACAGAGGATGCCGGGGTTTCATCAC
AAGGGATGATCTGCTACAGGTGCAGGACGCGTGAGCTGCTGCTCCTCCTC
GTTCCGATAGCATGCAAGCAAGGAGTGAGGTTGCTCAACTTCGAAGTCGT
TTTTAAATTTGTTCTACCCGACTGATGACGAACCGAGCTTTTCTCCAGTA
GTGGTCGTGAGCTCTGGAGGAGGTGGGAGCATAAGTTCCCCGGAGGGTGG
CTTGCACGCTCAGATTCTGGTGTTCTTCACAGGCTTCCACCCGTTAGCAG
TGTATCATGGGCATGAGAGACTATCAGTGCCCCAACCAACCTTGTACAGA
AAACCACTCCCGTGTTGACTAGGCCAAGTCATCGTTTCCGTTGTGCCCGC
AAAAACAATTGCTTTTTACATGCGGGGTTGGTGAACGTCTCACGCATTGG
TGGTATCGCTTCTCATGCACGTACTGTACTGTACGATCAACAGGTTATGT
CGGAAGTTTTCAGCGAGAGCGAAATGCCGCCGGTCAAGGTCGCGGAGATG
TTCTCGGAAGCCGATTGGGACGGAAGCGGACGGGTGGGCACGAGGTCCTG
TTCGACGGCTGTGTGTCTTTTCCACCTCCTACGTAGCTCATTGAACCCCG
CCTCTGTTTTTCTGAGTGCACACCCGATCCGTCAAGCCGACACGCCCCAC
AGACATTTCTTCTGCGGTGTTTACACGACGATACTGGAGCTTAATCAATT
GTACCAACTGTTGCCGGCAAGAGCGTCGTGCGCGGCACCGCGGGGCTGAT
TTGCCGTCTGGCGTTGACATGACGTGATGCTTCAAAAACAACGTCGATTG
GTGAAGTGGCACGCGCGCGTCATTTTCGTGCGCACTCAACGAGAACAATG
GCTGTTGTGGCAATGACTGTTGTGGGCCGGCCTTGTTACCTCTTGCCATG
TATGTACGTCAACATGCAAAATATTTCCTTCTGCAACACAATAGCTTCCC
CCCGGAAGGTGCCGTTGTGTTTAGATGTGCTCGTTTTGTCTGCAGATACC
AACAATTCGAATCGTACTTTGTCTTCAGATTGGATACCAACAATTCGAGA
GCATGATGACCAACCGGCTTCCAACGGAGCTGGTACGGCGAAGGGAACGC
CGCCCCAGGCCAGCCTTCTGAACCGGGCCCAGCGCACGGTAAGCCGTTTT
ATAGAAATCGCACACCAAGGGTCCGCCCGCTGCATGCAACGGAAAGCGGG
GACCTCACACGGAAGCATGACAATGTTTCGGCAACGGCGAGTGACACCTC
GTTGGTCCCATCTCAAATATTTTGTCCAGACGTTCCCATTCCGGCCTTCC
CCCCCAAAAAACTCCTGCCTAATTTCCCCGGTCAGGCTGCGTGTGCCACA
CGGTACCGAATTTGTGTCAGAGCGTTTTTTTTTTTTTTTTTACCCGCGTT
GTCTCACAAATGTTGTCTCACACATGATGCTAACCTCACGGCAGCAACCG
GTAGATCACTTACAAGCTAATATCGTTGTGATTGTGTTTCGCCTCCAAGC
CTGCCCACGGGACAGTTTACAATGTCATGCTGCTTCTGCATGCAAAAACA
CAGCAGTTGCACCCTTCTTCTTTCTATCTTGTGCCTTGTTCTTCGTCAGT
GGTTTGTCTCCGATTCCAAGTTTATCGCGAAACGCCTCGCGAACCTTGTT
TTCCTCTTCTTGAAGGGCCGCCCACAATGCAGCGGTCCGATTCTCCTCCA
CCCCCACCCCCCCTTGTTCCTTTTCCTTGACGGCGCTCTTTTTCCTCTTT
GGTCCGTGTACGTTTCTCCGCTTTTGATGCGTGGCTATTCCCTTCACACC
AGTAGTGGTAGCCGTAGCCTTTTCCGTGCCCCTGTCTTGAGGGTGCAACC
CCTCCCCAGGAGACCATCGTCGGACCGACTCCTTCACCTTTTTCTTTTCC
TCCGCCTGCAAGACTGACCACTCCGCGAGTGCGACTGCTGTGGTGGTGCC
AGAGGCGCTTGGTGGGTCTCGCTCGTTTGGGACAGCCTCCTGCGACGCCG
ATAGCTGAGATACGAGCCTCGACACGCTCACGGCACCCCCCTTTGCCCCG
CCAGCAGACTTATCCACCTTGTTCGCACGGTTAGTATTCATCGTCGCGTT
TGGTGGAGGGTGATGTATACCGACGTGCTTGCCCTCGTCAATTTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGTCTGGCTTGTTCACGCTCTGTCGAGGTC
AGCCAGCCGGAGACCAAAAAACATGGGGCGCTCGTGGGAGAGGAGGTTGG
CGAGGCCTCGACGCTGCTGTGTTCAGCTTTCTTTCCGCTTTCCTCCTCGT
GCTCTTCCTCAGCCTGAAAGTTCACCACATCACACCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTTTTTTCTGGCGGGGGTGGTGCTCCGCTACC
ACTGCTGCTGTGTGTTGTTGTCGAGATCGCTACCGGTGGCGGTGGCCTTT
TTGGAGTGTTGCCTTCACCAAGGCATCCCTCGTGATTGGTTGTAGTCATC
TCCCCTGCCACGGCCGACTGCTGTGGTGACGCCGGTGTGGCCGATTGCAG
CTCTGCGTTACTACGTTCGTCGGGACTACTTCGTCGCGGTTGCAGGTAAG
CCTCCTGCGCCGGGACCTGTACACGAGAGGCTGGCGGTATCACCTCTTCC
GCAGGGGGCCGTCCGCTGGCGTTCGTATTACTCTCTTCCTTCTGCTGCGC
ACGATGAAGCATTTTGGTGGCTTCGACGTTGCCAGGTTCGAGGACAATCA
CCGCTCGGAAGTCGGATCCGGCGTCTGGCGCCCTGCCCAAGGCTAGCCGA
GCCTGCCCCCGGCGAAAGAGCGCCTTGGCGCAGGAAGGTTGGATGTGGAG
TGCTCGAGAACAAGCTTCTTCTGCTTCTTGCATCGAGCCTAGCTTGATTT
GAGCGTAGGCAAGGTTGCAAAGGCAAGCTAGTTCTAGGTCTGGACCAGCG
GCATCGCTCTTTGGGCACGGTATCTGTGAGCAATGCGCGGGGCAGAAGAG
AATAGGGTACGCGGCGTTAGGGCGAAGCTGCTTTCGCCCGATTATATACC
AAAACGAGGCCGTTAGACCAGACTAGACTAAAGGAATGCTTTCATGTCCA
GATCATGCGTATGGGAGTGCTTGTGACCACGGAATTGGGACGATAGAGGT
CCGCAGTGTTTTTTTTGTGTCAAGAAATCGAC

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1336:10907..17238-

>mRNA_E-siliculosus-1a_F_contig1336.2028.1 ID=mRNA_E-siliculosus-1a_F_contig1336.2028.1|Name=mRNA_E-siliculosus-1a_F_contig1336.2028.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1626bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1336:10907..17238- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGTCCCGAATAACGGAGTCAAAGCTACAAGAGATCTCCGACTGTTT
CAACGAATTCAGCGACAACAAGAATGGCGTCCCGAATAACGGAGTCAAAG
CTACAAGAGATCTCCGACTGTTTCAACGAATTCAGCGACAACAAGAGCTA
CCTGGACAAGGACGATCTCAAGGTGGCGGTGACCGCTCTGCTGGGATTTC
GACCGTCGAAGGCTACCTGGACAAGGACGATCTCAAGGTGGCGGTGACCG
CTCTGCTGGGATTTCGACCGTCGAAGTTCGATGTTCAACAAATGCTAGCT
TTGGCAACGGCAGAGGATCCGCAGTGTCCAGTTCGATGTTCAACAAATGC
TAGCTTTGGCAACGGCAGAGGATCCGCAGTGTCCAGGGATGTCTAGAGAT
ATGTTTATCGAGTCCATGGGCCGTCGCCTCGCCCTGGTCGATCCGGCGGA
GGAATTGCGCCAGATCTTCAAAGCCTTTGACAGAGGATGCCGGGGTTTCA
TCACAAGGGATGATCTGCTACAGGGATGTCTAGAGATATGTTTATCGAGT
CCATGGGCCGTCGCCTCGCCCTGGTCGATCCGGCGGAGGAATTGCGCCAG
ATCTTCAAAGCCTTTGACAGAGGATGCCGGGGTTTCATCACAAGGGATGA
TCTGCTACAGGTTATGTCGGAAGTTTTCAGCGAGAGCGAAATGCCGCCGG
TCAAGGTCGCGGAGATGTTCTCGGAAGCCGATTGGGACGGAAGCGGACGG
GTGGGCACGAGGTCCTGTTATGTCGGAAGTTTTCAGCGAGAGCGAAATGC
CGCCGGTCAAGGTCGCGGAGATGTTCTCGGAAGCCGATTGGGACGGAAGC
GGACGGGTGGGCACGAGGTCCTATTGGATACCAACAATTCGAGAGCATGA
TGACCAACCGGCTTCCAACGGAGCTGGTACGGCGAAGGGAACGCCGCCCC
AGGCCAGCCTTCTGAACCGGGCCCAGCGCACGATTGGATACCAACAATTC
GAGAGCATGATGACCAACCGGCTTCCAACGGAGCTGGTACGGCGAAGGGA
ACGCCGCCCCAGGCCAGCCTTCTGAACCGGGCCCAGCGCACGCCAGCCGG
AGACCAAAAAACATGGGGCGCTCGTGGGAGAGGAGGTTGGCGAGGCCTCG
ACGCTGCTGTGTTCAGCTTTCTTTCCGCTTTCCCAGCCGGAGACCAAAAA
ACATGGGGCGCTCGTGGGAGAGGAGGTTGGCGAGGCCTCGACGCTGCTGT
GTTCAGCTTTCTTTCCGCTTTCGCTGCTGCTGCTGCTGCTTTTTTCTGGC
GGGGGTGGTGCTCCGCTACCACTGCTGCTGTGTGTTGTTGTCGAGATCGC
TACCGGTGGCGGTGGCCTTTTTGGAGTGTTGCCTTCACCAAGGCATCCCT
CGTGATTGGTTGTAGTCATCTCCCCTGCCACGGCCGACTGCTGTGGTGAG
CTGCTGCTGCTGCTGCTTTTTTCTGGCGGGGGTGGTGCTCCGCTACCACT
GCTGCTGTGTGTTGTTGTCGAGATCGCTACCGGTGGCGGTGGCCTTTTTG
GAGTGTTGCCTTCACCAAGGCATCCCTCGTGATTGGTTGTAGTCATCTCC
CCTGCCACGGCCGACTGCTGTGGTGA